Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000610.1

Orthogroup ID

OG0003901

Physical Location & Seq

Genomic Coordinates Forward (+)

32390 .. 36246

Gene Structure 3857 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000610.1_g000011.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2202 bp

atgaggatcatgataaagggcggcgtgtggaagaacacggaggatgagatcctcaaggccgccgttatgaagtacggcaagaaccagtgggctcgaatctcctccctcctcgttcgcaaatccgccaagcagtgcaaggctcgctggtacgagtggctcgatccctccatcaaaaagaccgagtggactcgagaagaggatgagaaacttcttcatcttgctaagcttatgcctacgcagtggagaacaattgccccaatcgttggtcgtactccatctcaatgccttgaaaggtacgagaagctccttgatgcagcctgtgtcaaggatgagaactatgaaccaggtgatgatccccgaaaattgcggcctggagagattgaccccaatcctgagtctaagcctgctcgtccggatcctgttgatatggatgaggatgagaaggaaatgctttctgaggcacgagctcggttagccaacaccaggggaaagaaggccaaaagaaaggctagagagaaacagctggaggaagccagaaggcttgcttccctacagaaaaggagagaattaaaggctgctgggattgataataggcagcggaagaggaaaaggaaggggatagactacaacgctgaaattccttttgagaagaagcctcctccaggcttttatgatgttgctgatgaagatagaccagttgaccagcctcagttccctacgactattgaggagcttgaaggaaagagaagggttgatgtggaagctcagttgaggaaacaagatattgcaaagaataaaattgctcagaggcaggatgctccatcagcgatattgcaagctaacaagttgaatgatccagaaacagttaggaagagatcaaagcttatgcttcctgcacctcagatttcagatcatgagttggaggaaattgcaaagatgggctatgcaaatgatcttgctgggagtgaactcacagaaggaagtggtgcaactcgagcccttcttgcaaattatgcccagacaccaaggctgggaatgactccttcacgtacgccccaaagaacacctgctggtaaaggtgatgctatcatgatggaagcttcaaatttggccatgttgagagagtctcagacaccgttgttaggaggagagaatccacagttgcacccatcagatttttctggtgtcactcctagaaaaaaggaaatccagacgccaaatttgatgcttactccttcaactcctggaggtgcaggtcttactcctaggattggcttgaccccggcaagggattcttttggcatgacaccaaaggggactccaatgagggacgagcttcgtatcaatgaagatgttgatatgcatgatagtgcaaagatggagcatcggagacaggctgagttaaggaaaaacttgcagatgggtctaagcaagttaccacagcccaaaaatgagtaccagatagtcatgcagccagttccagaagataatgaagaacctgaggagaagattgaagaagatatgtctgataggattgctagagaaagggctgaggaagaagcacgacagcaggcattacttaggaagagatcaaaagtactgcagagggagctccctaggcctcctgctccttcagtggaatctctgagaaagtccttgctgagagcagatgaagataagagtaaagttgttcctcctacttcaattgagcaggccaatgaaatgattacgaaggagcttcttagtttactagagcatgataatgtgaaatacccacttgatgagaaagtagataagcggaaaaagaaaggtaccaagcgcagtgcaaatggctctactcctactgtccctgagatagaagactttgaagaagatgaactgaaggaggctgattcaatgataaaggaagaggttgagtatcttcgtgttgcaatgggacatgaagataaatccctcgatgaatttgttgaagtacacaagacatgcatgaatgatttcatgttttttcctaggcgcaatgcttatggtgcatcaagtattgctggaaatgaggagaaacttgaggctttgcagaatgagtttgagaatgtgaagaagaagttggatgatgatcttgggaaggcagcgagccttgaaaaaaaggttaaagttcgaacacatggttatgaggtatgcttctgtcttatactttttaattgttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000981 GO:0000988 GO:0000989 GO:0001067 GO:0001076 GO:0001134 GO:0001135 GO:0002218 GO:0002253 GO:0002376 GO:0002682 GO:0002684 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0006357 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0008150 GO:0009507 GO:0009536 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009870 GO:0009889 GO:0009987 GO:0010204 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0023052 GO:0030154 GO:0031323 GO:0031326 GO:0031347 GO:0031349 GO:0032502 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044444 GO:0044464 GO:0045088 GO:0045089 GO:0048518 GO:0048583 GO:0048584 GO:0048869 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051252 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0065007 GO:0080090 GO:0080134 GO:0097159 GO:0098542 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

Myb_Cef Myb_DNA-binding

Protein Analysis

733

Amino Acids

83.53

Weight (kDa)

7.92

Isoelectric Point (pI)

53.77

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003901)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G09770
fragaria_vesca	FvH4_3g19200 FvH4_3g19210 FvH4_6g01950
malus_domestica	MD04G1229500.v1.1 MD12G1246400.v1.1
prunus_persica	Prupe.6G349400_v2.0.a1
pyrus_communis	pycom04g20330 pycom04g20340 pycom12g22600
rosa_chinensis	RchiOBHm_Chr3g0449801 RchiOBHm_Chr5g0032281
rosa_laevigata	RLG00000025799 RLG00000033377
rosa_multiflora	Rmu_co8441867.1_g000001 Rmu_sc0000610.1_g000011 Rmu_sc0013983.1_g000008 Rmu_ssc0000013.1_g000001
rosa_roxburghii	Rroxscaffold_1G00048170 Rroxscaffold_1G00048180 Rroxscaffold_6G00427620
rosa_rugosa	Rorug02G0623400 Rorug02G0623400 Rorug05G0130300
rosa_samantha	Rh3AG021600 Rh3BG022300 Rh3CG020900 Rh3DG022000 Rh5BG224900 Rh5CG250300 Rh5DG229500 Rh5DG229600
rosa_wichuraiana	Rw3G001770 Rw5G020450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1075
Acc36I	ACCTGC	2 cut(s)	1075, 1244
Acc65I	GGTACC	1 cut(s)	1811
AccB1I	GGYRCC	1 cut(s)	1811
AccB7I	CCANNNNNTGG	1 cut(s)	263
AccIII	TCCGGA	1 cut(s)	412
AciI	CCGC	6 cut(s)	21, 60, 123, 367, 598, 1798
AclWI	GGATC	7 cut(s)	14, 43, 155, 347, 410, 423, 848
AcoI	YGGCCR	1 cut(s)	1110
AcsI	RAATTY	4 cut(s)	636, 1105, 1219, 1961
AcuI	CTGAAG	2 cut(s)	1617, 1901
AcyI	GRCGYC	1 cut(s)	1214
AfaI	GTAC	9 cut(s)	74, 149, 271, 296, 1051, 1457, 1599, 1813, 1974
AfiI	CCNNNNNNNGG	8 cut(s)	263, 483, 662, 1031, 1142, 1271, 1287, 1288
AjnI	CCWGG	5 cut(s)	343, 370, 482, 661, 1243
AjuI	GAANNNNNNNTTGG	2 cut(s)	2084, 2116
Alw21I	GWGCWC	2 cut(s)	469, 1614
Alw26I	GTCTC	2 cut(s)	1131, 1384
AlwI	GGATC	7 cut(s)	14, 43, 155, 347, 410, 423, 848
Ama87I	CYCGRG	2 cut(s)	189, 993
Aor13HI	TCCGGA	1 cut(s)	412
AoxI	GGCC	6 cut(s)	57, 368, 495, 1110, 1619, 1713
ApeKI	GCWGC	5 cut(s)	314, 575, 595, 1471, 2123
ApoI	RAATTY	4 cut(s)	636, 1105, 1219, 1961
ArsI	GACNNNNNNTTYG	2 cut(s)	1204, 1236
Asp700I	GAANNNNTTC	1 cut(s)	1994
Asp718I	GGTACC	1 cut(s)	1811
AspA2I	CCTAGG	3 cut(s)	1265, 1616, 2009
AspLEI	GCGC	2 cut(s)	1821, 2016
AsuC2I	CCSGG	1 cut(s)	1283
AsuHPI	GGTGA	2 cut(s)	359, 1091
AsuII	TTCGAA	1 cut(s)	2152
AvaI	CYCGRG	2 cut(s)	189, 993
AvrII	CCTAGG	3 cut(s)	1265, 1616, 2009
AxyI	CCTNAGG	1 cut(s)	1500
BalI	TGGCCA	1 cut(s)	1112
BamHI	GGATCC	1 cut(s)	415
BanI	GGYRCC	1 cut(s)	1811
BanII	GRGCYC	4 cut(s)	94, 469, 1000, 1614
BauI	CACGAG	1 cut(s)	462
BbsI	GAAGAC	1 cut(s)	1866
Bbv12I	GWGCWC	2 cut(s)	469, 1614
BbvCI	CCTCAGC	1 cut(s)	1551
BbvI	GCAGC	5 cut(s)	326, 562, 607, 1483, 2135
BccI	CCATC	8 cut(s)	176, 283, 829, 931, 1087, 1177, 1372, 1414
BceAI	ACGGC	2 cut(s)	47, 91
BciT130I	CCWGG	5 cut(s)	345, 372, 484, 663, 1245
BcnI	CCSGG	1 cut(s)	1283
BcoDI	GTCTC	2 cut(s)	1131, 1384
BfaI	CTAG	7 cut(s)	510, 1194, 1266, 1539, 1617, 1751, 2010
BfmI	CTRYAG	2 cut(s)	551, 1601
BfuAI	ACCTGC	2 cut(s)	1075, 1244
BisI	GCNGC	8 cut(s)	22, 60, 315, 368, 576, 596, 1472, 2124
BlnI	CCTAGG	3 cut(s)	1265, 1616, 2009
BlpI	GCTNAGC	1 cut(s)	222
BlsI	GCNGC	8 cut(s)	23, 61, 316, 369, 577, 597, 1473, 2125
BmcAI	AGTACT	1 cut(s)	1599
Bme1390I	CCNGG	6 cut(s)	345, 372, 484, 663, 1245, 1283
BmeT110I	CYCGRG	2 cut(s)	189, 993
BmiI	GGNNCC	2 cut(s)	417, 1813
BmrFI	CCNGG	6 cut(s)	345, 372, 484, 663, 1245, 1283
BmsI	GCATC	6 cut(s)	301, 805, 1072, 1215, 1393, 2039
BpiI	GAAGAC	1 cut(s)	1866
BplI	GAGNNNNNCTC	2 cut(s)	1111, 1143
BpmI	CTGGAG	4 cut(s)	393, 545, 645, 1266
Bpu10I	CCTNAGC	1 cut(s)	1551
Bpu1102I	GCTNAGC	1 cut(s)	222
Bpu14I	TTCGAA	1 cut(s)	2152
BpuEI	CTTGAG	2 cut(s)	38, 2081
BpuMI	CCSGG	1 cut(s)	1283
BsaAI	YACGTR	1 cut(s)	1049
BsaBI	GATNNNNATC	1 cut(s)	2109
BsaHI	GRCGYC	1 cut(s)	1214
BsaJI	CCNNGG	6 cut(s)	483, 1025, 1265, 1281, 1616, 2009
BsaWI	WCCGGW	1 cut(s)	412
Bsc4I	CCNNNNNNNGG	8 cut(s)	263, 483, 662, 1031, 1142, 1271, 1287, 1288
Bse1I	ACTGG	3 cut(s)	85, 695, 1475
Bse21I	CCTNAGG	1 cut(s)	1500
Bse3DI	GCAATG	2 cut(s)	1938, 2023
Bse8I	GATNNNNATC	1 cut(s)	2109
BseAI	TCCGGA	1 cut(s)	412
BseBI	CCWGG	5 cut(s)	345, 372, 484, 663, 1245
BseDI	CCNNGG	6 cut(s)	483, 1025, 1265, 1281, 1616, 2009
BseGI	GGATG	7 cut(s)	49, 205, 334, 436, 442, 820, 2110
BseJI	GATNNNNATC	1 cut(s)	2109
BseLI	CCNNNNNNNGG	8 cut(s)	263, 483, 662, 1031, 1142, 1271, 1287, 1288
BseMI	GCAATG	2 cut(s)	1938, 2023
BseNI	ACTGG	3 cut(s)	85, 695, 1475
BseRI	GAGGAG	7 cut(s)	91, 98, 648, 743, 1161, 1517, 2066
BseXI	GCAGC	5 cut(s)	326, 562, 607, 1483, 2135
BseYI	CCCAGC	3 cut(s)	578, 959, 1030
BsgI	GTGCAG	2 cut(s)	879, 1272
BshFI	GGCC	6 cut(s)	59, 370, 497, 1112, 1621, 1715
BshNI	GGYRCC	1 cut(s)	1811
BsiHKAI	GWGCWC	2 cut(s)	469, 1614
BsiHKCI	CYCGRG	2 cut(s)	189, 993
BsiSI	CCGG	2 cut(s)	413, 1283
BsiWI	CGTACG	1 cut(s)	1049
BslFI	GGGAC	4 cut(s)	1330, 1343, 1832, 1950
BslI	CCNNNNNNNGG	8 cut(s)	263, 483, 662, 1031, 1142, 1271, 1287, 1288
BsmAI	GTCTC	2 cut(s)	1131, 1384
BsmFI	GGGAC	4 cut(s)	1330, 1343, 1832, 1950
BsnI	GGCC	6 cut(s)	59, 370, 497, 1112, 1621, 1715
BsoBI	CYCGRG	2 cut(s)	189, 993
Bsp119I	TTCGAA	1 cut(s)	2152
Bsp1286I	GDGCHC	4 cut(s)	94, 469, 1000, 1614
Bsp13I	TCCGGA	1 cut(s)	412
Bsp1720I	GCTNAGC	1 cut(s)	222
BspACI	CCGC	6 cut(s)	21, 60, 123, 367, 598, 1798
BspANI	GGCC	6 cut(s)	59, 370, 497, 1112, 1621, 1715
BspEI	TCCGGA	1 cut(s)	412
BspHI	TCATGA	3 cut(s)	9, 913, 1089
BspLI	GGNNCC	2 cut(s)	417, 1813
BspMAI	CTGCAG	1 cut(s)	1605
BspMI	ACCTGC	2 cut(s)	1075, 1244
BspPI	GGATC	7 cut(s)	14, 43, 155, 347, 410, 423, 848
BspT104I	TTCGAA	1 cut(s)	2152
BspT107I	GGYRCC	1 cut(s)	1811
BsrDI	GCAATG	2 cut(s)	1938, 2023
BsrI	ACTGG	3 cut(s)	85, 695, 1475
BssECI	CCNNGG	6 cut(s)	483, 1025, 1265, 1281, 1616, 2009
BssNI	GRCGYC	1 cut(s)	1214
BssSI	CACGAG	1 cut(s)	462
BssT1I	CCWWGG	4 cut(s)	1025, 1265, 1616, 2009
Bst2BI	CACGAG	1 cut(s)	462
Bst2UI	CCWGG	5 cut(s)	345, 372, 484, 663, 1245
Bst4CI	ACNGT	4 cut(s)	865, 1137, 1161, 1846
Bst6I	CTCTTC	5 cut(s)	189, 596, 866, 1580, 1902
BstACI	GRCGYC	1 cut(s)	1214
BstAPI	GCANNNNNTGC	1 cut(s)	1013
BstBAI	YACGTR	1 cut(s)	1049
BstBI	TTCGAA	1 cut(s)	2152
BstC8I	GCNNGC	7 cut(s)	142, 405, 543, 837, 1572, 1713, 2128
BstENI	CCTNNNNNAGG	1 cut(s)	660
BstF5I	GGATG	7 cut(s)	49, 205, 334, 436, 442, 820, 2110
BstHHI	GCGC	2 cut(s)	1821, 2016
BstMAI	GTCTC	2 cut(s)	1131, 1384
BstMWI	GCNNNNNNNGC	9 cut(s)	141, 473, 824, 995, 1004, 1013, 1609, 1618, 2027
BstNI	CCWGG	5 cut(s)	345, 372, 484, 663, 1245
BstNSI	RCATGY	1 cut(s)	1986
BstSCI	CCNGG	6 cut(s)	343, 370, 482, 661, 1243, 1281
BstSFI	CTRYAG	2 cut(s)	551, 1601
BstV1I	GCAGC	5 cut(s)	326, 562, 607, 1483, 2135
BstV2I	GAAGAC	1 cut(s)	1866
BstX2I	RGATCY	2 cut(s)	48, 415
BstYI	RGATCY	2 cut(s)	48, 415
Bsu36I	CCTNAGG	1 cut(s)	1500
BsuRI	GGCC	6 cut(s)	59, 370, 497, 1112, 1621, 1715
BtsCI	GGATG	7 cut(s)	49, 205, 334, 436, 442, 820, 2110
BtsI	GCAGTG	3 cut(s)	137, 245, 1828
BtsIMutI	CAGTG	5 cut(s)	92, 137, 245, 1641, 1828
BveI	ACCTGC	2 cut(s)	1075, 1244
Cac8I	GCNNGC	7 cut(s)	142, 405, 543, 837, 1572, 1713, 2128
CciI	TCATGA	3 cut(s)	9, 913, 1089
CfoI	GCGC	2 cut(s)	1821, 2016
CseI	GACGC	1 cut(s)	1222
CsiI	ACCWGGT	1 cut(s)	343
Csp6I	GTAC	9 cut(s)	73, 148, 270, 295, 1050, 1456, 1598, 1812, 1973
CviQI	GTAC	9 cut(s)	73, 148, 270, 295, 1050, 1456, 1598, 1812, 1973
EaeI	YGGCCR	1 cut(s)	1110
Eam1104I	CTCTTC	5 cut(s)	189, 596, 866, 1580, 1902
EarI	CTCTTC	5 cut(s)	189, 596, 866, 1580, 1902
EciI	GGCGGA	1 cut(s)	112
Ecl136II	GAGCTC	2 cut(s)	467, 1612
Eco130I	CCWWGG	4 cut(s)	1025, 1265, 1616, 2009
Eco147I	AGGCCT	1 cut(s)	1621
Eco24I	GRGCYC	4 cut(s)	94, 469, 1000, 1614
Eco53kI	GAGCTC	2 cut(s)	467, 1612
Eco57I	CTGAAG	2 cut(s)	1617, 1901
Eco81I	CCTNAGG	1 cut(s)	1500
Eco88I	CYCGRG	2 cut(s)	189, 993
EcoICRI	GAGCTC	2 cut(s)	467, 1612
EcoNI	CCTNNNNNAGG	1 cut(s)	660
EcoRII	CCWGG	5 cut(s)	343, 370, 482, 661, 1243
EcoT14I	CCWWGG	4 cut(s)	1025, 1265, 1616, 2009
EcoT22I	ATGCAT	2 cut(s)	1365, 1988
EcoT38I	GRGCYC	4 cut(s)	94, 469, 1000, 1614
ErhI	CCWWGG	4 cut(s)	1025, 1265, 1616, 2009
FalI	AAGNNNNNCTT	4 cut(s)	529, 561, 1279, 1311
FaqI	GGGAC	4 cut(s)	1330, 1343, 1832, 1950
Fnu4HI	GCNGC	8 cut(s)	22, 60, 315, 368, 576, 596, 1472, 2124
FokI	GGATG	7 cut(s)	56, 212, 341, 443, 449, 827, 2117
FriOI	GRGCYC	4 cut(s)	94, 469, 1000, 1614
Fsp4HI	GCNGC	8 cut(s)	22, 60, 315, 368, 576, 596, 1472, 2124
FspBI	CTAG	7 cut(s)	510, 1194, 1266, 1539, 1617, 1751, 2010
GlaI	GCGC	2 cut(s)	1820, 2015
GluI	GCNGC	8 cut(s)	22, 60, 315, 368, 576, 596, 1472, 2124
GsaI	CCCAGC	3 cut(s)	582, 963, 1034
GsuI	CTGGAG	4 cut(s)	393, 545, 645, 1266
HaeIII	GGCC	6 cut(s)	59, 370, 497, 1112, 1621, 1715
HapII	CCGG	2 cut(s)	413, 1283
HgaI	GACGC	1 cut(s)	1222
HhaI	GCGC	2 cut(s)	1821, 2016
Hin1I	GRCGYC	1 cut(s)	1214
Hin6I	GCGC	2 cut(s)	1819, 2014
HinP1I	GCGC	2 cut(s)	1819, 2014
HincII	GTYRAC	1 cut(s)	700
HindII	GTYRAC	1 cut(s)	700
HindIII	AAGCTT	3 cut(s)	224, 881, 1098
HpaII	CCGG	2 cut(s)	413, 1283
HphI	GGTGA	2 cut(s)	359, 1091
Hpy166II	GTNNAC	5 cut(s)	186, 700, 968, 1748, 1975
Hpy188I	TCNGA	9 cut(s)	457, 807, 903, 910, 1131, 1174, 1389, 1528, 1647
Hpy188III	TCNNGA	9 cut(s)	10, 191, 392, 413, 857, 914, 1090, 1210, 1481
Hpy8I	GTNNAC	5 cut(s)	186, 700, 968, 1748, 1975
HpyCH4III	ACNGT	4 cut(s)	865, 1137, 1161, 1846
HpyCH4IV	ACGT	1 cut(s)	1048
HpyF10VI	GCNNNNNNNGC	9 cut(s)	141, 473, 824, 995, 1004, 1013, 1609, 1618, 2027
HpySE526I	ACGT	1 cut(s)	1048
Hsp92I	GRCGYC	1 cut(s)	1214
HspAI	GCGC	2 cut(s)	1819, 2014
Kpn2I	TCCGGA	1 cut(s)	412
KpnI	GGTACC	1 cut(s)	1815
LmnI	GCTCC	8 cut(s)	309, 730, 823, 1381, 1609, 1617, 1633, 1735
Lsp1109I	GCAGC	5 cut(s)	326, 562, 607, 1483, 2135
LweI	GCATC	6 cut(s)	301, 805, 1072, 1215, 1393, 2039
MabI	ACCWGGT	1 cut(s)	343
MaeI	CTAG	7 cut(s)	510, 1194, 1266, 1539, 1617, 1751, 2010
MaeII	ACGT	1 cut(s)	1048
MaeIII	GTNAC	2 cut(s)	1186, 1434
MfeI	CAATTG	2 cut(s)	249, 1704
MflI	RGATCY	2 cut(s)	48, 415
MhlI	GDGCHC	4 cut(s)	94, 469, 1000, 1614
MlsI	TGGCCA	1 cut(s)	1112
MluNI	TGGCCA	1 cut(s)	1112
MlyI	GAGTC	5 cut(s)	181, 404, 1033, 1133, 1312
MmeI	TCCRAC	2 cut(s)	900, 2082
Mox20I	TGGCCA	1 cut(s)	1112
Mph1103I	ATGCAT	2 cut(s)	1365, 1988
MroI	TCCGGA	1 cut(s)	412
MroXI	GAANNNNTTC	1 cut(s)	1994
MscI	TGGCCA	1 cut(s)	1112
MseI	TTAA	4 cut(s)	569, 1403, 2145, 2193
MslI	CAYNNNNRTG	4 cut(s)	280, 1368, 1761, 2163
Msp20I	TGGCCA	1 cut(s)	1112
MspA1I	CMGCKG	2 cut(s)	523, 598
MspI	CCGG	2 cut(s)	413, 1283
MspR9I	CCNGG	6 cut(s)	345, 372, 484, 663, 1245, 1283
MunI	CAATTG	2 cut(s)	249, 1704
MvaI	CCWGG	5 cut(s)	345, 372, 484, 663, 1245
MwoI	GCNNNNNNNGC	9 cut(s)	141, 473, 824, 995, 1004, 1013, 1609, 1618, 2027
NciI	CCSGG	1 cut(s)	1283
NlaIV	GGNNCC	2 cut(s)	417, 1813
NmuCI	GTSAC	1 cut(s)	1186
NsiI	ATGCAT	2 cut(s)	1365, 1988
NspI	RCATGY	1 cut(s)	1986
NspV	TTCGAA	1 cut(s)	2152
PaeR7I	CTCGAG	2 cut(s)	189, 993
PagI	TCATGA	3 cut(s)	9, 913, 1089
PaqCI	CACCTGC	1 cut(s)	1075
PceI	AGGCCT	1 cut(s)	1621
PcsI	WCGNNNNNNNCGW	1 cut(s)	156
PdmI	GAANNNNTTC	1 cut(s)	1994
PfeI	GAWTC	5 cut(s)	96, 1153, 1292, 1640, 1892
Pfl23II	CGTACG	1 cut(s)	1049
PflMI	CCANNNNNTGG	1 cut(s)	263
PfoI	TCCNGGA	1 cut(s)	1243
PkrI	GCNGC	8 cut(s)	23, 61, 316, 369, 577, 597, 1473, 2125
PleI	GAGTC	5 cut(s)	181, 403, 1033, 1132, 1312
PpsI	GAGTC	5 cut(s)	181, 403, 1033, 1132, 1312
Ppu21I	YACGTR	1 cut(s)	1049
Psp124BI	GAGCTC	2 cut(s)	469, 1614
Psp6I	CCWGG	5 cut(s)	343, 370, 482, 661, 1243
PspFI	CCCAGC	3 cut(s)	578, 959, 1030
PspGI	CCWGG	5 cut(s)	343, 370, 482, 661, 1243
PspLI	CGTACG	1 cut(s)	1049
PspN4I	GGNNCC	2 cut(s)	417, 1813
PspXI	VCTCGAGB	1 cut(s)	993
PstI	CTGCAG	1 cut(s)	1605
PsuI	RGATCY	2 cut(s)	48, 415
PvuII	CAGCTG	1 cut(s)	523
RsaI	GTAC	9 cut(s)	74, 149, 271, 296, 1051, 1457, 1599, 1813, 1974
RsaNI	GTAC	9 cut(s)	73, 148, 270, 295, 1050, 1456, 1598, 1812, 1973
RseI	CAYNNNNRTG	4 cut(s)	280, 1368, 1761, 2163
SacI	GAGCTC	2 cut(s)	469, 1614
SaqAI	TTAA	4 cut(s)	569, 1403, 2145, 2193
SatI	GCNGC	8 cut(s)	22, 60, 315, 368, 576, 596, 1472, 2124
ScaI	AGTACT	1 cut(s)	1599
SchI	GAGTC	5 cut(s)	181, 404, 1033, 1133, 1312
ScrFI	CCNGG	6 cut(s)	345, 372, 484, 663, 1245, 1283
SduI	GDGCHC	4 cut(s)	94, 469, 1000, 1614
SexAI	ACCWGGT	1 cut(s)	343
SfaNI	GCATC	6 cut(s)	301, 805, 1072, 1215, 1393, 2039
SfcI	CTRYAG	2 cut(s)	551, 1601
Sfr274I	CTCGAG	2 cut(s)	189, 993
SfuI	TTCGAA	1 cut(s)	2152
SlaI	CTCGAG	2 cut(s)	189, 993
SmiMI	CAYNNNNRTG	4 cut(s)	280, 1368, 1761, 2163
SmlI	CTYRAG	4 cut(s)	53, 189, 993, 2060
SmoI	CTYRAG	4 cut(s)	53, 189, 993, 2060
SseBI	AGGCCT	1 cut(s)	1621
SsiI	CCGC	6 cut(s)	21, 60, 123, 367, 598, 1798
SspMI	CTAG	7 cut(s)	510, 1194, 1266, 1539, 1617, 1751, 2010
SstI	GAGCTC	2 cut(s)	469, 1614
StuI	AGGCCT	1 cut(s)	1621
StyD4I	CCNGG	6 cut(s)	343, 370, 482, 661, 1243, 1281
StyI	CCWWGG	4 cut(s)	1025, 1265, 1616, 2009
TaaI	ACNGT	4 cut(s)	865, 1137, 1161, 1846
TaiI	ACGT	1 cut(s)	1051
TaqI	TCGA	6 cut(s)	94, 159, 190, 994, 1956, 2152
TaqII	GACCGA	1 cut(s)	194
TatI	WGTACW	2 cut(s)	1597, 1972
TauI	GCSGC	3 cut(s)	24, 62, 370
TfiI	GAWTC	5 cut(s)	96, 1153, 1292, 1640, 1892
Tru1I	TTAA	4 cut(s)	569, 1403, 2145, 2193
Tru9I	TTAA	4 cut(s)	569, 1403, 2145, 2193
TscAI	CASTG	5 cut(s)	92, 137, 245, 1641, 1828
TseFI	GTSAC	1 cut(s)	1186
TseI	GCWGC	5 cut(s)	314, 575, 595, 1471, 2123
Tsp45I	GTSAC	1 cut(s)	1186
TspGWI	ACGGA	1 cut(s)	53
TspRI	CASTG	5 cut(s)	92, 137, 245, 1641, 1828
Van91I	CCANNNNNTGG	1 cut(s)	263
XagI	CCTNNNNNAGG	1 cut(s)	660
XapI	RAATTY	4 cut(s)	636, 1105, 1219, 1961
XceI	RCATGY	1 cut(s)	1986
XhoI	CTCGAG	2 cut(s)	189, 993
XmaJI	CCTAGG	3 cut(s)	1265, 1616, 2009
XmnI	GAANNNNTTC	1 cut(s)	1994
XspI	CTAG	7 cut(s)	510, 1194, 1266, 1539, 1617, 1751, 2010
ZrmI	AGTACT	1 cut(s)	1599
Zsp2I	ATGCAT	2 cut(s)	1365, 1988

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.