Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0003901

Physical Location & Seq

Genomic Coordinates Reverse (-)

1117601 .. 1124588

Gene Structure 6988 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g01950.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2895 bp

ATGAGGATCATGATCAAGGGCGGCGTGTGGAAGAACACGGAGGATGAGATCCTCAAGGCCGCCGTCATGAAGTACGGCAAGAACCAGTGGGCCCGTATCTCGTCGCTGCTCGTTCGCAAGTCCGCCAAGCAGTGCAAGGCTCGCTGGTACGAGTGGCTCGATCCCTCCATCAAAAAGACTGAGTGGACTAGAGAAGAGGATGAGAAACTTCTACATCTCGCTAAGCTCATGCCTACGCAGTGGAGAACAATTGCCCCAATTGTTGGTCGTACTCCATCCCAATGCCTTGAGAGGTATGAGAAGCTTCTGGATGCAGCCTGTGTCAAGGATGAGAATTATGAACCAGGTGATGATCCCCGAAAGTTGCGGCCTGGAGAGATCGATCCCAATCCTGAGTCTAAGCCTGCTCGTCCGGATCCTGTTGATATGGATGAGGATGAGAAAGAAATGCTTTCTGAGGCACGAGCTAGGTTAGCCAACACCAGGGGAAAGAAGGCCAAAAGAAAGGCTAGAGAGAAACAGCTGGAAGAGGCCAGAAGGCTTGCTTCCCTACAGAAAAGGAGAGAATTAAAGGCTGCTGGGATTGATACTAGGCAGCGGAAGAGGAAAAGGAAGGGCATAGACTACAACGCTGAAATTCCCTTTGAGAAGAAGCCTCCTCCAGGCTTTTATGATGTTGCAGAGGAAGATAGACCAGTTGAGCAGCCTCAGTTCCCTACAACGATTGAGGAGCTTGAAGGGAAGAGAAGGGTTGATGTGGAAGCTCAGTTGAGGAAACAAGATATCGCAAAGAACAAAATTGCTCAGAGGCAGGATGCTCCATCTGCGATATTGCAAGCCAACAAGTTGAATGATCCAGAAACAGTTAGGAAGAGATCAAAGCTTATGCTTCCTGCGCCTCAGATTTCAGATCATGAGTTGGAGGAAATTGCAAAGATGGGCTATGCAAATGATCTTGCTGGGAGTGAACTCACAGAAGGAAGTGGTGCAACTCGAGCCCTTCTTGCCAATTATGCCCAGACACCAAGGCTGGGAATGACACCCTTACGTACGCCCCAAAGAACTCCTTCTGGTAAAGGTGATGCTATCATGATGGAAGCTTCAAATTTGGCAATGTTAAGAGAGTCTCAGACACCATTGTTAGGAGGAGAGAATCCACAGTTGCACCCATCAGATTTTTCTGGTGTTACTCCAAGAAAAAAGGAAATCCAGACGCCAAATCTGATGCTTACTCCTTCTATGCTTACTCCTTCTACTCCTGGAGGTGCGGGTCTTACTCCTAGGTTTGGCTTGACACCGTCAAGGGATGCTCTAGGCATGACACCAAAGGGGACTCCAATGAGGGACGAACTTCGTATCAATGAAGATGTTGATATGCATGATAGTGCAAAAATGGAGCATCGGAGACAGGCTGAGTTGAGGAAAAACTTGCAGTTGGGTTTAAGCAATCTACCACAGCCCAAAAATGAGTACCAGATAGTCATGCAGCCAGTTCCAGAAGATGATGAAGAACCCGAGGAGAAAATTGAAGAAGACATGTCTGATAGGATTGCTCGAGAAAGGGCTGAGGAAGAAGCACGACAGCAGGCATTACTAAGGAAGAGATCAAAAGTACTGCAGAGGGAGCTCCCTAGGCCTCCTGCTACTTCAGTGGAATCTCTGAGAAAATCCTTGTTGAGAGCAGATGAGGATAAGAGTAAAGTAGTTCCTCCTACTTCAATTGAGCAGGCCAATGAAATGATTACGAAGGAGCTTCTTAGTTTACTAGAGCATGATAATGCAAAATACCCGCTTGATGAGAAAACAGACAAGCGGAAAAAGAAAGGTTCCAAGCGCAGTACAAATGGTTCTACTTCTGCTGTCCCAGAGATAGATGATTTTGAAGAAGATGAACTGAAGGAGGCTGACTCGATGATAAACGACGAGGTTAAATATCTTCGTGTTGCAATGGGACATGAGGATAAGTCCGTGGATGAATTTGTTGAAGTACACAAGACCTGCATGAATGAATTCATGTTTTTTCCCAAGCGCAATGCCTATGGTTCATCAAGTATTGCTGGAAATGAGGAGAAACTTGAGGCTTTGCAAAATGAATTTGATAATGTCAAGAAGAAGTTGGATGATGATCTTGCAAAAGCAGTGAGCCTTGAGAAAAAGGTTAAAGTCCGAACACATGGTTATGAGATGCGAGCTAAAGACACTCATTGGCCAAAAATTGAGGAAACTTTCAAGCAGTTGGACACTGCTGAAAAAGAACTCGAGTGCTTCCGTGCTTTGCAGAAGCAAGAACAACTAGCAGCCTCACACCGGATAAACAATCTGTGGGAAGAAGTTCAGAAACAAAAGGAGCTTGAGCGCACTTTACAAAAGCGGTATGGCGGTCTTCTACTGGAGGTTGAAAGGGTACAGCACCTTAGGGAGAAATACATCGCGCAAGAACAAGAACAAAAAGAAGTTGCAGCCAGAAATGATCTCGAGTTGGCTGATGCTGCAGTAGATGTGACTGTTGCACAGTCAACTGGTAATCTTGATTCTACAAGTGCCTCAGATGAACTTGCTGCATCTCATGGTGAAACTACTGATCCACAAGTGGATGGTATGGATGTTGATGCAGACAAGAAATGTGACATGACAGTTACCACGGATGTAGATGTACCTAAAAACACACCTTCTGTTGCAGAGGGTGAGAAGGACATACCATCACAAGGTACAAGCGGTGAAGGTTCTGAGACTCACCTCTCTACCTCAGATGGGATCCCCTCCAGTGATGTTGCAGCTCAAGAGTCTGTTAGCAATGGAGACGCTGTTTCAGGCAGTGTGGCTAAGGTGCTTCCTACTGAAAATCTAACAAGGACAACTGTAGCCGATGACCAAGTTGTTGGGGCAGAAATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000981 GO:0000988 GO:0000989 GO:0001067 GO:0001076 GO:0001134 GO:0001135 GO:0002218 GO:0002253 GO:0002376 GO:0002682 GO:0002684 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0006357 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0008150 GO:0009507 GO:0009536 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009870 GO:0009889 GO:0009987 GO:0010204 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0023052 GO:0030154 GO:0031323 GO:0031326 GO:0031347 GO:0031349 GO:0032502 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044444 GO:0044464 GO:0045088 GO:0045089 GO:0048518 GO:0048583 GO:0048584 GO:0048869 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051252 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0065007 GO:0080090 GO:0080134 GO:0097159 GO:0098542 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

Myb_Cef Myb_DNA-binding

Protein Analysis

965

Amino Acids

108.53

Weight (kDa)

5.49

Isoelectric Point (pI)

48.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myb_DNA-binding	PF00249	8 - 53	4.5e-13	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	10 - 70	7.6e-14	Myb-like DNA-binding domain
Myb_DNA-binding	PF00249	59 - 103	6e-10	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	62 - 109	5.6e-09	Myb-like DNA-binding domain
Myb_Cef	PF11831	405 - 657	2.6e-60	pre-mRNA splicing factor component

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0003901)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G09770
fragaria_vesca	FvH4_3g19200 FvH4_3g19210 FvH4_6g01950
malus_domestica	MD04G1229500.v1.1 MD12G1246400.v1.1
prunus_persica	Prupe.6G349400_v2.0.a1
pyrus_communis	pycom04g20330 pycom04g20340 pycom12g22600
rosa_chinensis	RchiOBHm_Chr3g0449801 RchiOBHm_Chr5g0032281
rosa_laevigata	RLG00000025799 RLG00000033377
rosa_multiflora	Rmu_co8441867.1_g000001 Rmu_sc0000610.1_g000011 Rmu_sc0013983.1_g000008 Rmu_ssc0000013.1_g000001
rosa_roxburghii	Rroxscaffold_1G00048170 Rroxscaffold_1G00048180 Rroxscaffold_6G00427620
rosa_rugosa	Rorug02G0623400 Rorug02G0623400 Rorug05G0130300
rosa_samantha	Rh3AG021600 Rh3BG022300 Rh3CG020900 Rh3DG022000 Rh5BG224900 Rh5CG250300 Rh5DG229500 Rh5DG229600
rosa_wichuraiana	Rw3G001770 Rw5G020450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	2006
AccB7I	CCANNNNNTGG	1 cut(s)	263
AccII	CGCG	1 cut(s)	2432
AccIII	TCCGGA	1 cut(s)	412
AcoI	YGGCCR	1 cut(s)	2207
AcsI	RAATTY	5 cut(s)	636, 1105, 1976, 2009, 2093
AcuI	CTGAAG	2 cut(s)	1632, 1916
AcyI	GRCGYC	1 cut(s)	1214
AfiI	CCNNNNNNNGG	9 cut(s)	263, 483, 662, 1031, 1142, 1286, 2307, 2705, 2751
AflIII	ACRYGT	1 cut(s)	1536
AgsI	TTSAA	9 cut(s)	737, 850, 1104, 1529, 1719, 1883, 1985, 2230, 2399
AjnI	CCWGG	5 cut(s)	343, 370, 482, 661, 1258
Alw21I	GWGCWC	1 cut(s)	1629
Alw26I	GTCTC	4 cut(s)	1131, 1399, 2723, 2793
Ama87I	CYCGRG	5 cut(s)	993, 1514, 1554, 2258, 2474
Aor13HI	TCCGGA	1 cut(s)	412
AoxI	GGCC	8 cut(s)	57, 90, 368, 495, 531, 1634, 1728, 2207
ApaI	GGGCCC	1 cut(s)	94
ApoI	RAATTY	5 cut(s)	636, 1105, 1976, 2009, 2093
Asp700I	GAANNNNTTC	3 cut(s)	1066, 2009, 2331
AspA2I	CCTAGG	2 cut(s)	1280, 1631
AspLEI	GCGC	5 cut(s)	898, 1836, 2031, 2358, 2434
AspS9I	GGNCC	2 cut(s)	90, 91
AsuHPI	GGTGA	6 cut(s)	359, 1091, 2582, 2696, 2726, 2729
AvaI	CYCGRG	5 cut(s)	993, 1514, 1554, 2258, 2474
AvrII	CCTAGG	2 cut(s)	1280, 1631
AxyI	CCTNAGG	1 cut(s)	2414
BaeGI	GKGCMC	1 cut(s)	94
BalI	TGGCCA	1 cut(s)	2209
BamHI	GGATCC	2 cut(s)	415, 2754
BanII	GRGCYC	3 cut(s)	94, 1000, 1629
BauI	CACGAG	1 cut(s)	462
BbsI	GAAGAC	2 cut(s)	1539, 2375
Bbv12I	GWGCWC	1 cut(s)	1629
BbvCI	CCTCAGC	1 cut(s)	1566
BccI	CCATC	9 cut(s)	176, 283, 829, 931, 1087, 1177, 2588, 2707, 2744
BceAI	ACGGC	2 cut(s)	47, 91
BciT130I	CCWGG	5 cut(s)	345, 372, 484, 663, 1260
BclI	TGATCA	1 cut(s)	12
BcoDI	GTCTC	4 cut(s)	1131, 1399, 2723, 2793
BfaI	CTAG	9 cut(s)	189, 468, 510, 591, 1281, 1313, 1632, 1766, 2294
BfmI	CTRYAG	4 cut(s)	551, 1616, 2490, 2859
BfuAI	ACCTGC	1 cut(s)	2006
BlnI	CCTAGG	2 cut(s)	1280, 1631
BlpI	GCTNAGC	1 cut(s)	222
BmcAI	AGTACT	1 cut(s)	1614
Bme1390I	CCNGG	5 cut(s)	345, 372, 484, 663, 1260
BmeT110I	CYCGRG	5 cut(s)	993, 1514, 1554, 2258, 2474
BmgT120I	GGNCC	2 cut(s)	90, 91
BmiI	GGNNCC	4 cut(s)	92, 417, 1828, 2756
BmrFI	CCNGG	5 cut(s)	345, 372, 484, 663, 1260
BpiI	GAAGAC	2 cut(s)	1539, 2375
BplI	GAGNNNNNCTC	2 cut(s)	1892, 1924
BpmI	CTGGAG	5 cut(s)	393, 645, 1281, 2411, 2746
Bpu10I	CCTNAGC	2 cut(s)	1566, 2823
Bpu1102I	GCTNAGC	1 cut(s)	222
BpuEI	CTTGAG	6 cut(s)	38, 308, 2096, 2168, 2372, 2763
Bsa29I	ATCGAT	1 cut(s)	381
BsaAI	YACGTR	1 cut(s)	1049
BsaBI	GATNNNNATC	3 cut(s)	11, 387, 2124
BsaHI	GRCGYC	1 cut(s)	1214
BsaJI	CCNNGG	7 cut(s)	483, 1025, 1280, 1515, 1631, 1968, 2640
BsaWI	WCCGGW	2 cut(s)	412, 2307
BsaXI	ACNNNNNCTCC	2 cut(s)	2790, 2820
Bsc4I	CCNNNNNNNGG	9 cut(s)	263, 483, 662, 1031, 1142, 1286, 2307, 2705, 2751
Bse1I	ACTGG	6 cut(s)	85, 695, 1490, 2394, 2524, 2763
Bse21I	CCTNAGG	1 cut(s)	2414
Bse3DI	GCAATG	4 cut(s)	1119, 1953, 2038, 2800
Bse8I	GATNNNNATC	3 cut(s)	11, 387, 2124
BseAI	TCCGGA	1 cut(s)	412
BseBI	CCWGG	5 cut(s)	345, 372, 484, 663, 1260
BseCI	ATCGAT	1 cut(s)	381
BseDI	CCNNGG	7 cut(s)	483, 1025, 1280, 1515, 1631, 1968, 2640
BseJI	GATNNNNATC	3 cut(s)	11, 387, 2124
BseLI	CCNNNNNNNGG	9 cut(s)	263, 483, 662, 1031, 1142, 1286, 2307, 2705, 2751
BseMI	GCAATG	4 cut(s)	1119, 1953, 2038, 2800
BseNI	ACTGG	6 cut(s)	85, 695, 1490, 2394, 2524, 2763
BseRI	GAGGAG	5 cut(s)	648, 743, 1161, 1532, 2081
BseSI	GKGCMC	1 cut(s)	94
BseYI	CCCAGC	3 cut(s)	578, 959, 1030
Bsh1236I	CGCG	1 cut(s)	2432
BshFI	GGCC	8 cut(s)	59, 92, 370, 497, 533, 1636, 1730, 2209
BshVI	ATCGAT	1 cut(s)	381
BsiHKAI	GWGCWC	1 cut(s)	1629
BsiHKCI	CYCGRG	5 cut(s)	993, 1514, 1554, 2258, 2474
BsiSI	CCGG	2 cut(s)	413, 2308
BsiWI	CGTACG	1 cut(s)	1049
BslFI	GGGAC	4 cut(s)	1345, 1358, 1847, 1965
BslI	CCNNNNNNNGG	9 cut(s)	263, 483, 662, 1031, 1142, 1286, 2307, 2705, 2751
BsmAI	GTCTC	4 cut(s)	1131, 1399, 2723, 2793
BsmBI	CGTCTC	1 cut(s)	2793
BsmFI	GGGAC	4 cut(s)	1345, 1358, 1847, 1965
BsnI	GGCC	8 cut(s)	59, 92, 370, 497, 533, 1636, 1730, 2209
BsoBI	CYCGRG	5 cut(s)	993, 1514, 1554, 2258, 2474
Bsp120I	GGGCCC	1 cut(s)	90
Bsp1286I	GDGCHC	3 cut(s)	94, 1000, 1629
Bsp13I	TCCGGA	1 cut(s)	412
Bsp1720I	GCTNAGC	1 cut(s)	222
BspANI	GGCC	8 cut(s)	59, 92, 370, 497, 533, 1636, 1730, 2209
BspDI	ATCGAT	1 cut(s)	381
BspEI	TCCGGA	1 cut(s)	412
BspFNI	CGCG	1 cut(s)	2432
BspHI	TCATGA	4 cut(s)	9, 66, 913, 1089
BspLI	GGNNCC	4 cut(s)	92, 417, 1828, 2756
BspMAI	CTGCAG	2 cut(s)	1620, 2494
BspMI	ACCTGC	1 cut(s)	2006
BsrDI	GCAATG	4 cut(s)	1119, 1953, 2038, 2800
BsrI	ACTGG	6 cut(s)	85, 695, 1490, 2394, 2524, 2763
BssECI	CCNNGG	7 cut(s)	483, 1025, 1280, 1515, 1631, 1968, 2640
BssNI	GRCGYC	1 cut(s)	1214
BssSI	CACGAG	1 cut(s)	462
BssT1I	CCWWGG	3 cut(s)	1025, 1280, 1631
Bst2BI	CACGAG	1 cut(s)	462
Bst2UI	CCWGG	5 cut(s)	345, 372, 484, 663, 1260
Bst4CI	ACNGT	7 cut(s)	865, 1161, 1299, 2506, 2514, 2635, 2860
Bst6I	CTCTTC	6 cut(s)	189, 522, 596, 737, 866, 1595
BstACI	GRCGYC	1 cut(s)	1214
BstBAI	YACGTR	1 cut(s)	1049
BstC8I	GCNNGC	7 cut(s)	142, 405, 543, 837, 1587, 1728, 2190
BstDSI	CCRYGG	2 cut(s)	1968, 2640
BstENI	CCTNNNNNAGG	1 cut(s)	660
BstFNI	CGCG	1 cut(s)	2432
BstHHI	GCGC	5 cut(s)	898, 1836, 2031, 2358, 2434
BstMAI	GTCTC	4 cut(s)	1131, 1399, 2723, 2793
BstNI	CCWGG	5 cut(s)	345, 372, 484, 663, 1260
BstNSI	RCATGY	1 cut(s)	1540
BstSCI	CCNGG	5 cut(s)	343, 370, 482, 661, 1258
BstSFI	CTRYAG	4 cut(s)	551, 1616, 2490, 2859
BstSLI	GKGCMC	1 cut(s)	94
BstSNI	TACGTA	1 cut(s)	1049
BstUI	CGCG	1 cut(s)	2432
BstV2I	GAAGAC	2 cut(s)	1539, 2375
BstX2I	RGATCY	3 cut(s)	48, 415, 2754
BstXI	CCANNNNNNTGG	1 cut(s)	2879
BstYI	RGATCY	3 cut(s)	48, 415, 2754
Bsu15I	ATCGAT	1 cut(s)	381
Bsu36I	CCTNAGG	1 cut(s)	2414
BsuRI	GGCC	8 cut(s)	59, 92, 370, 497, 533, 1636, 1730, 2209
BsuTUI	ATCGAT	1 cut(s)	381
BtgI	CCRYGG	2 cut(s)	1968, 2640
BtgZI	GCGATG	1 cut(s)	2413
BtsI	GCAGTG	5 cut(s)	137, 245, 2145, 2241, 2821
BtsIMutI	CAGTG	8 cut(s)	92, 137, 245, 1656, 2145, 2241, 2770, 2821
BveI	ACCTGC	1 cut(s)	2006
Cac8I	GCNNGC	7 cut(s)	142, 405, 543, 837, 1587, 1728, 2190
CciI	TCATGA	4 cut(s)	9, 66, 913, 1089
CfoI	GCGC	5 cut(s)	898, 1836, 2031, 2358, 2434
Cfr13I	GGNCC	2 cut(s)	90, 91
ClaI	ATCGAT	1 cut(s)	381
CseI	GACGC	2 cut(s)	1222, 2810
CsiI	ACCWGGT	1 cut(s)	343
EaeI	YGGCCR	1 cut(s)	2207
Eam1104I	CTCTTC	6 cut(s)	189, 522, 596, 737, 866, 1595
EarI	CTCTTC	6 cut(s)	189, 522, 596, 737, 866, 1595
EciI	GGCGGA	1 cut(s)	112
Ecl136II	GAGCTC	1 cut(s)	1627
Eco105I	TACGTA	1 cut(s)	1049
Eco130I	CCWWGG	3 cut(s)	1025, 1280, 1631
Eco147I	AGGCCT	1 cut(s)	1636
Eco24I	GRGCYC	3 cut(s)	94, 1000, 1629
Eco32I	GATATC	1 cut(s)	784
Eco53kI	GAGCTC	1 cut(s)	1627
Eco57I	CTGAAG	2 cut(s)	1632, 1916
Eco81I	CCTNAGG	1 cut(s)	2414
Eco88I	CYCGRG	5 cut(s)	993, 1514, 1554, 2258, 2474
EcoICRI	GAGCTC	1 cut(s)	1627
EcoNI	CCTNNNNNAGG	1 cut(s)	660
EcoRI	GAATTC	1 cut(s)	2009
EcoRII	CCWGG	5 cut(s)	343, 370, 482, 661, 1258
EcoRV	GATATC	1 cut(s)	784
EcoT14I	CCWWGG	3 cut(s)	1025, 1280, 1631
EcoT22I	ATGCAT	1 cut(s)	1380
EcoT38I	GRGCYC	3 cut(s)	94, 1000, 1629
ErhI	CCWWGG	3 cut(s)	1025, 1280, 1631
Esp3I	CGTCTC	1 cut(s)	2793
FalI	AAGNNNNNCTT	6 cut(s)	435, 467, 529, 561, 1051, 1083
FaqI	GGGAC	4 cut(s)	1345, 1358, 1847, 1965
FauI	CCCGC	2 cut(s)	1261, 1797
FbaI	TGATCA	1 cut(s)	12
FriOI	GRGCYC	3 cut(s)	94, 1000, 1629
FspBI	CTAG	9 cut(s)	189, 468, 510, 591, 1281, 1313, 1632, 1766, 2294
GlaI	GCGC	5 cut(s)	897, 1835, 2030, 2357, 2433
GsaI	CCCAGC	3 cut(s)	582, 963, 1034
GsuI	CTGGAG	5 cut(s)	393, 645, 1281, 2411, 2746
HaeIII	GGCC	8 cut(s)	59, 92, 370, 497, 533, 1636, 1730, 2209
HapII	CCGG	2 cut(s)	413, 2308
HgaI	GACGC	2 cut(s)	1222, 2810
HhaI	GCGC	5 cut(s)	898, 1836, 2031, 2358, 2434
Hin1I	GRCGYC	1 cut(s)	1214
Hin6I	GCGC	5 cut(s)	896, 1834, 2029, 2356, 2432
HinP1I	GCGC	5 cut(s)	896, 1834, 2029, 2356, 2432
HincII	GTYRAC	1 cut(s)	2517
HindII	GTYRAC	1 cut(s)	2517
HindIII	AAGCTT	3 cut(s)	302, 881, 1098
HinfI	GANTC	9 cut(s)	395, 1124, 1153, 1333, 1655, 1907, 2531, 2731, 2783
HpaII	CCGG	2 cut(s)	413, 2308
HphI	GGTGA	6 cut(s)	359, 1091, 2582, 2696, 2726, 2729
Hpy166II	GTNNAC	5 cut(s)	186, 968, 1763, 1990, 2517
Hpy8I	GTNNAC	5 cut(s)	186, 968, 1763, 1990, 2517
Hpy99I	CGWCG	2 cut(s)	106, 1925
HpyCH4III	ACNGT	7 cut(s)	865, 1161, 1299, 2506, 2514, 2635, 2860
HpyCH4IV	ACGT	1 cut(s)	1048
HpySE526I	ACGT	1 cut(s)	1048
Hsp92I	GRCGYC	1 cut(s)	1214
HspAI	GCGC	5 cut(s)	896, 1834, 2029, 2356, 2432
Kpn2I	TCCGGA	1 cut(s)	412
Ksp22I	TGATCA	1 cut(s)	12
LmnI	GCTCC	7 cut(s)	730, 823, 1396, 1624, 1632, 1750, 2347
MabI	ACCWGGT	1 cut(s)	343
MaeI	CTAG	9 cut(s)	189, 468, 510, 591, 1281, 1313, 1632, 1766, 2294
MaeII	ACGT	1 cut(s)	1048
MaeIII	GTNAC	4 cut(s)	1186, 2500, 2624, 2635
MfeI	CAATTG	3 cut(s)	249, 258, 1719
MflI	RGATCY	3 cut(s)	48, 415, 2754
MhlI	GDGCHC	3 cut(s)	94, 1000, 1629
MlsI	TGGCCA	1 cut(s)	2209
MluNI	TGGCCA	1 cut(s)	2209
MlyI	GAGTC	6 cut(s)	404, 1133, 1327, 1901, 2725, 2792
MmeI	TCCRAC	3 cut(s)	900, 2097, 2217
Mox20I	TGGCCA	1 cut(s)	2209
Mph1103I	ATGCAT	1 cut(s)	1380
MroI	TCCGGA	1 cut(s)	412
MroXI	GAANNNNTTC	3 cut(s)	1066, 2009, 2331
MscI	TGGCCA	1 cut(s)	2209
MseI	TTAA	5 cut(s)	569, 1118, 1442, 1929, 2160
MslI	CAYNNNNRTG	4 cut(s)	280, 1383, 1776, 2178
Msp20I	TGGCCA	1 cut(s)	2209
MspA1I	CMGCKG	2 cut(s)	523, 598
MspI	CCGG	2 cut(s)	413, 2308
MspR9I	CCNGG	5 cut(s)	345, 372, 484, 663, 1260
MunI	CAATTG	3 cut(s)	249, 258, 1719
MvaI	CCWGG	5 cut(s)	345, 372, 484, 663, 1260
MvnI	CGCG	1 cut(s)	2432
NlaIV	GGNNCC	4 cut(s)	92, 417, 1828, 2756
NmuCI	GTSAC	2 cut(s)	2500, 2624
NsiI	ATGCAT	1 cut(s)	1380
NspI	RCATGY	1 cut(s)	1540
PaeR7I	CTCGAG	4 cut(s)	993, 1554, 2258, 2474
PagI	TCATGA	4 cut(s)	9, 66, 913, 1089
PceI	AGGCCT	1 cut(s)	1636
PciI	ACATGT	1 cut(s)	1536
PcsI	WCGNNNNNNNCGW	1 cut(s)	156
PdmI	GAANNNNTTC	3 cut(s)	1066, 2009, 2331
PfeI	GAWTC	3 cut(s)	1153, 1655, 2531
Pfl23II	CGTACG	1 cut(s)	1049
PflFI	GACNNNGTC	1 cut(s)	1297
PflMI	CCANNNNNTGG	1 cut(s)	263
PfoI	TCCNGGA	1 cut(s)	1258
PleI	GAGTC	6 cut(s)	403, 1132, 1327, 1901, 2725, 2791
PpsI	GAGTC	6 cut(s)	403, 1132, 1327, 1901, 2725, 2791
Ppu21I	YACGTR	1 cut(s)	1049
PscI	ACATGT	1 cut(s)	1536
Psp124BI	GAGCTC	1 cut(s)	1629
Psp6I	CCWGG	5 cut(s)	343, 370, 482, 661, 1258
PspFI	CCCAGC	3 cut(s)	578, 959, 1030
PspGI	CCWGG	5 cut(s)	343, 370, 482, 661, 1258
PspLI	CGTACG	1 cut(s)	1049
PspN4I	GGNNCC	4 cut(s)	92, 417, 1828, 2756
PspOMI	GGGCCC	1 cut(s)	90
PspPI	GGNCC	2 cut(s)	90, 91
PspXI	VCTCGAGB	2 cut(s)	993, 2258
PsrI	GAACNNNNNNTAC	2 cut(s)	1831, 1863
PstI	CTGCAG	2 cut(s)	1620, 2494
PsuI	RGATCY	3 cut(s)	48, 415, 2754
PsyI	GACNNNGTC	1 cut(s)	1297
PvuII	CAGCTG	1 cut(s)	523
RseI	CAYNNNNRTG	4 cut(s)	280, 1383, 1776, 2178
SacI	GAGCTC	1 cut(s)	1629
SaqAI	TTAA	5 cut(s)	569, 1118, 1442, 1929, 2160
Sau96I	GGNCC	2 cut(s)	90, 91
ScaI	AGTACT	1 cut(s)	1614
SchI	GAGTC	6 cut(s)	404, 1133, 1327, 1901, 2725, 2792
ScrFI	CCNGG	5 cut(s)	345, 372, 484, 663, 1260
SduI	GDGCHC	3 cut(s)	94, 1000, 1629
SexAI	ACCWGGT	1 cut(s)	343
SfcI	CTRYAG	4 cut(s)	551, 1616, 2490, 2859
Sfr274I	CTCGAG	4 cut(s)	993, 1554, 2258, 2474
SlaI	CTCGAG	4 cut(s)	993, 1554, 2258, 2474
SmiMI	CAYNNNNRTG	4 cut(s)	280, 1383, 1776, 2178
SnaBI	TACGTA	1 cut(s)	1049
SseBI	AGGCCT	1 cut(s)	1636
SspMI	CTAG	9 cut(s)	189, 468, 510, 591, 1281, 1313, 1632, 1766, 2294
SstI	GAGCTC	1 cut(s)	1629
StuI	AGGCCT	1 cut(s)	1636
StyD4I	CCNGG	5 cut(s)	343, 370, 482, 661, 1258
StyI	CCWWGG	3 cut(s)	1025, 1280, 1631
TaaI	ACNGT	7 cut(s)	865, 1161, 1299, 2506, 2514, 2635, 2860
TaiI	ACGT	1 cut(s)	1051
TaqI	TCGA	7 cut(s)	159, 381, 994, 1555, 1910, 2259, 2475
TatI	WGTACW	3 cut(s)	1612, 1838, 1987
TauI	GCSGC	3 cut(s)	24, 62, 370
TfiI	GAWTC	3 cut(s)	1153, 1655, 2531
Tru1I	TTAA	5 cut(s)	569, 1118, 1442, 1929, 2160
Tru9I	TTAA	5 cut(s)	569, 1118, 1442, 1929, 2160
TscAI	CASTG	8 cut(s)	92, 137, 245, 1656, 2145, 2248, 2770, 2821
TseFI	GTSAC	2 cut(s)	2500, 2624
Tsp45I	GTSAC	2 cut(s)	2500, 2624
TspGWI	ACGGA	4 cut(s)	53, 1957, 2258, 2657
TspRI	CASTG	8 cut(s)	92, 137, 245, 1656, 2145, 2248, 2770, 2821
Tth111I	GACNNNGTC	1 cut(s)	1297
Van91I	CCANNNNNTGG	1 cut(s)	263
XagI	CCTNNNNNAGG	1 cut(s)	660
XapI	RAATTY	5 cut(s)	636, 1105, 1976, 2009, 2093
XceI	RCATGY	1 cut(s)	1540
XhoI	CTCGAG	4 cut(s)	993, 1554, 2258, 2474
XmaJI	CCTAGG	2 cut(s)	1280, 1631
XmnI	GAANNNNTTC	3 cut(s)	1066, 2009, 2331
XspI	CTAG	9 cut(s)	189, 468, 510, 591, 1281, 1313, 1632, 1766, 2294
ZrmI	AGTACT	1 cut(s)	1614
Zsp2I	ATGCAT	1 cut(s)	1380

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.