AT1G15570

Belongs to the cyclin family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Forward (+)
5361865 .. 5365559
3695 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G15570.1

Sequence Viewer

Length: 1353 bp
ATGGGGAAGGAAAATGCTGTGTCTCGGCCATTCACTCGTTCCCTTGCCTCTGCTTTGCGCGCTTCAGAAGTGACTTCTACTACACAGAATCAACAGAGAGTAAACACAAAAAGACCAGCCTTGGAGGATACAAGAGCCACTGGACCCAACAAGAGGAAGAAGCGAGCGGTTCTAGGGGAGATCACAAATGTTAACTCCAATACAGCTATACTTGAGGCCAAAAACAGCAAGCAGATAAAGAAAGGACGCGGTCATGGATTGGCGAGTACATCCCAGTTGGCAACTTCTGTTACTTCAGAAGTCACAGATCTTCAGTCCAGGACCGATGCAAAAGTTGAAGTTGCATCAAATACAGCAGGAAACCTTTCTGTTTCTAAAGGCACAGATAACACAGCTGATAACTGTATTGAGATATGGAATTCTAGATTGCCTCCAAGACCTCTTGGGAGATCAGCTTCTACAGCTGAGAAAAGTGCTGTTATTGGTAGTTCAACTGTACCGGATATCCCAAAATTTGTAGACATCGATTCAGATGACAAGGATCCTTTACTGTGCTGCCTCTATGCCCCTGAAATCCACTACAATTTGCGTGTTTCAGAGCTTAAACGCAGACCACTTCCGGACTTTATGGAGAGAATACAGAAGGATGTCACCCAGTCCATGCGGGGAATTCTGGTTGATTGGCTTGTGGAGGTCTCTGAAGAATACACACTTGCATCTGACACTCTCTACCTCACAGTGTATCTCATAGACTGGTTCCTCCATGGAAACTACGTGCAAAGACAGCAACTTCAACTGCTCGGCATCACTTGCATGCTAATTGCCTCGAAGTATGAGGAAATCTCTGCTCCACGCATTGAGGAGTTTTGCTTCATTACGGATAACACCTACACAAGAGATCAGGTCCTGGAAATGGAGAACCAAGTACTTAAGCATTTTAGCTTTCAAATATACACTCCCACTCCAAAAACGTTCCTTAGGAGATTTCTCAGAGCAGCTCAAGCCTCTCGCCTGAGCCCAAGCCTTGAAGTCGAGTTTCTAGCCAGCTATCTAACAGAGTTGACATTAATAGACTACCATTTCTTAAAGTTTCTTCCTTCCGTTGTTGCTGCTTCAGCGGTTTTTCTCGCCAAGTGGACAATGGACCAATCAAACCACCCATGGAATCCAACACTTGAGCATTACACAACGTACAAAGCATCGGATCTGAAAGCATCTGTTCATGCCTTACAAGATCTGCAGCTTAACACCAAAGGTTGCCCCTTGAGCGCTATACGCATGAAGTATAGGCAAGAGAAATACAAATCTGTGGCGGTTCTCACGTCTCCAAAGCTACTTGACACGCTATTCTGA

Protein Analysis

450

Amino Acids

50.64

Weight (kDa)

8.82

Isoelectric Point (pI)

42.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cyclin_N PF00134 192 - 317 7.8e-43 Cyclin, N-terminal domain
Cyclin_C PF02984 320 - 442 5e-36 Cyclin, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 167
AccI GTMKAC 1 cut(s) 519
AccII CGCG 2 cut(s) 60, 249
AccIII TCCGGA 1 cut(s) 619
AciI CCGC 5 cut(s) 167, 249, 664, 1118, 1313
AclI AACGTT 1 cut(s) 971
AclWI GGATC 3 cut(s) 536, 549, 1212
AcoI YGGCCR 1 cut(s) 26
AcsI RAATTY 3 cut(s) 418, 512, 669
AcuI CTGAAG 5 cut(s) 48, 279, 296, 720, 1098
AfaI GTAC 4 cut(s) 268, 498, 927, 1193
AfeI AGCGCT 1 cut(s) 1270
AfiI CCNNNNNNNGG 2 cut(s) 153, 913
AflII CTTAAG 1 cut(s) 929
AgsI TTSAA 5 cut(s) 338, 492, 794, 947, 1028
AjiI CACGTC 1 cut(s) 1323
AjnI CCWGG 2 cut(s) 317, 906
Alw26I GTCTC 3 cut(s) 27, 700, 1329
AlwI GGATC 3 cut(s) 536, 549, 1212
AlwNI CAGNNNCTG 1 cut(s) 907
Aor13HI TCCGGA 1 cut(s) 619
Aor51HI AGCGCT 1 cut(s) 1270
AoxI GGCC 2 cut(s) 26, 216
ApeKI GCWGC 4 cut(s) 555, 995, 1109, 1240
ApoI RAATTY 3 cut(s) 418, 512, 669
AseI ATTAAT 1 cut(s) 1067
Asp700I GAANNNNTTC 1 cut(s) 364
AspLEI GCGC 3 cut(s) 60, 62, 1271
AspS9I GGNCC 4 cut(s) 143, 321, 904, 1144
AsuHPI GGTGA 1 cut(s) 643
AvaII GGWCC 4 cut(s) 143, 321, 904, 1144
AxyI CCTNAGG 1 cut(s) 977
BamHI GGATCC 1 cut(s) 541
BanII GRGCYC 1 cut(s) 1019
BbvI GCAGC 4 cut(s) 542, 1007, 1096, 1252
BciT130I CCWGG 2 cut(s) 319, 908
BciVI GTATCC 1 cut(s) 121
BcoDI GTCTC 3 cut(s) 27, 700, 1329
BfaI CTAG 3 cut(s) 173, 423, 1040
BfmI CTRYAG 2 cut(s) 459, 1238
BfoI RGCGCY 1 cut(s) 1272
BfrI CTTAAG 1 cut(s) 929
BfuI GTATCC 1 cut(s) 121
BglII AGATCT 2 cut(s) 307, 1234
BisI GCNGC 4 cut(s) 556, 996, 1110, 1241
BlsI GCNGC 4 cut(s) 557, 997, 1111, 1242
BmcAI AGTACT 1 cut(s) 927
Bme1390I CCNGG 2 cut(s) 319, 908
Bme18I GGWCC 4 cut(s) 143, 321, 904, 1144
BmgBI CACGTC 1 cut(s) 1323
BmgT120I GGNCC 4 cut(s) 143, 321, 904, 1144
BmiI GGNNCC 3 cut(s) 145, 543, 758
BmrFI CCNGG 2 cut(s) 319, 908
BmrI ACTGGG 2 cut(s) 268, 649
BmsI GCATC 6 cut(s) 316, 353, 725, 813, 1208, 1223
BmuI ACTGGG 2 cut(s) 268, 649
BplI GAGNNNNNCTC 2 cut(s) 827, 859
Bpu10I CCTNAGC 1 cut(s) 1013
BpuEI CTTGAG 4 cut(s) 233, 984, 1196, 1285
Bsa29I ATCGAT 1 cut(s) 525
BsaAI YACGTR 1 cut(s) 775
BsaI GGTCTC 1 cut(s) 700
BsaJI CCNNGG 3 cut(s) 120, 763, 1160
BsaWI WCCGGW 2 cut(s) 499, 619
BsaXI ACNNNNNCTCC 2 cut(s) 946, 976
Bsc4I CCNNNNNNNGG 2 cut(s) 153, 913
Bse1I ACTGG 4 cut(s) 145, 274, 655, 758
Bse21I CCTNAGG 1 cut(s) 977
BseAI TCCGGA 1 cut(s) 619
BseBI CCWGG 2 cut(s) 319, 908
BseCI ATCGAT 1 cut(s) 525
BseDI CCNNGG 3 cut(s) 120, 763, 1160
BseGI GGATG 2 cut(s) 269, 652
BseLI CCNNNNNNNGG 2 cut(s) 153, 913
BseMII CTCAG 3 cut(s) 456, 1003, 1004
BseNI ACTGG 4 cut(s) 145, 274, 655, 758
BsePI GCGCGC 1 cut(s) 58
BseRI GAGGAG 1 cut(s) 875
BseXI GCAGC 4 cut(s) 542, 1007, 1096, 1252
Bsh1236I CGCG 2 cut(s) 60, 249
BshFI GGCC 2 cut(s) 28, 218
BshVI ATCGAT 1 cut(s) 525
BsiSI CCGG 2 cut(s) 500, 620
BslI CCNNNNNNNGG 2 cut(s) 153, 913
BsmAI GTCTC 3 cut(s) 27, 700, 1329
BsmBI CGTCTC 1 cut(s) 1329
BsnI GGCC 2 cut(s) 28, 218
Bso31I GGTCTC 1 cut(s) 700
Bsp1286I GDGCHC 1 cut(s) 1019
Bsp13I TCCGGA 1 cut(s) 619
Bsp143I GATC 7 cut(s) 180, 307, 449, 541, 898, 1204, 1234
Bsp19I CCATGG 2 cut(s) 763, 1160
BspACI CCGC 5 cut(s) 167, 249, 664, 1118, 1313
BspANI GGCC 2 cut(s) 28, 218
BspCNI CTCAG 3 cut(s) 457, 1002, 1005
BspDI ATCGAT 1 cut(s) 525
BspEI TCCGGA 1 cut(s) 619
BspFNI CGCG 2 cut(s) 60, 249
BspLI GGNNCC 3 cut(s) 145, 543, 758
BspMAI CTGCAG 1 cut(s) 1242
BspPI GGATC 3 cut(s) 536, 549, 1212
BspTI CTTAAG 1 cut(s) 929
BspTNI GGTCTC 1 cut(s) 700
BsrBI CCGCTC 1 cut(s) 167
BsrI ACTGG 4 cut(s) 145, 274, 655, 758
BssECI CCNNGG 3 cut(s) 120, 763, 1160
BssHII GCGCGC 1 cut(s) 58
BssMI GATC 7 cut(s) 180, 307, 449, 541, 898, 1204, 1234
BssT1I CCWWGG 3 cut(s) 120, 763, 1160
Bst2UI CCWGG 2 cut(s) 319, 908
Bst4CI ACNGT 4 cut(s) 404, 496, 552, 739
BstAFI CTTAAG 1 cut(s) 929
BstAPI GCANNNNNTGC 1 cut(s) 810
BstBAI YACGTR 1 cut(s) 775
BstC8I GCNNGC 5 cut(s) 60, 165, 230, 815, 1045
BstDEI CTNAG 4 cut(s) 465, 977, 989, 1013
BstDSI CCRYGG 2 cut(s) 763, 1160
BstF5I GGATG 2 cut(s) 269, 652
BstFNI CGCG 2 cut(s) 60, 249
BstH2I RGCGCY 1 cut(s) 1272
BstHHI GCGC 3 cut(s) 60, 62, 1271
BstKTI GATC 7 cut(s) 183, 310, 452, 544, 901, 1207, 1237
BstMAI GTCTC 3 cut(s) 27, 700, 1329
BstMBI GATC 7 cut(s) 180, 307, 449, 541, 898, 1204, 1234
BstMWI GCNNNNNNNGC 8 cut(s) 59, 461, 784, 810, 1001, 1115, 1266, 1275
BstNI CCWGG 2 cut(s) 319, 908
BstNSI RCATGY 1 cut(s) 817
BstSCI CCNGG 2 cut(s) 317, 906
BstSFI CTRYAG 2 cut(s) 459, 1238
BstUI CGCG 2 cut(s) 60, 249
BstV1I GCAGC 4 cut(s) 542, 1007, 1096, 1252
BstX2I RGATCY 4 cut(s) 307, 541, 1204, 1234
BstYI RGATCY 4 cut(s) 307, 541, 1204, 1234
Bsu15I ATCGAT 1 cut(s) 525
Bsu36I CCTNAGG 1 cut(s) 977
BsuI GTATCC 1 cut(s) 121
BsuRI GGCC 2 cut(s) 28, 218
BsuTUI ATCGAT 1 cut(s) 525
BtgI CCRYGG 2 cut(s) 763, 1160
BtrI CACGTC 1 cut(s) 1323
BtsCI GGATG 2 cut(s) 269, 652
BtsIMutI CAGTG 2 cut(s) 138, 744
Cac8I GCNNGC 5 cut(s) 60, 165, 230, 815, 1045
CaiI CAGNNNCTG 1 cut(s) 907
CfoI GCGC 3 cut(s) 60, 62, 1271
Cfr13I GGNCC 4 cut(s) 143, 321, 904, 1144
ClaI ATCGAT 1 cut(s) 525
CseI GACGC 1 cut(s) 255
Csp6I GTAC 4 cut(s) 267, 497, 926, 1192
CviAII CATG 7 cut(s) 254, 661, 764, 814, 1161, 1223, 1279
CviQI GTAC 4 cut(s) 267, 497, 926, 1192
DdeI CTNAG 4 cut(s) 465, 977, 989, 1013
DpnI GATC 7 cut(s) 182, 309, 451, 543, 900, 1206, 1236
DpnII GATC 7 cut(s) 180, 307, 449, 541, 898, 1204, 1234
EaeI YGGCCR 1 cut(s) 26
Eco130I CCWWGG 3 cut(s) 120, 763, 1160
Eco24I GRGCYC 1 cut(s) 1019
Eco31I GGTCTC 1 cut(s) 700
Eco32I GATATC 1 cut(s) 505
Eco47I GGWCC 4 cut(s) 143, 321, 904, 1144
Eco47III AGCGCT 1 cut(s) 1270
Eco57I CTGAAG 5 cut(s) 48, 279, 296, 720, 1098
Eco81I CCTNAGG 1 cut(s) 977
EcoO109I RGGNCCY 1 cut(s) 904
EcoRI GAATTC 2 cut(s) 418, 669
EcoRII CCWGG 2 cut(s) 317, 906
EcoRV GATATC 1 cut(s) 505
EcoT14I CCWWGG 3 cut(s) 120, 763, 1160
EcoT38I GRGCYC 1 cut(s) 1019
ErhI CCWWGG 3 cut(s) 120, 763, 1160
Esp3I CGTCTC 1 cut(s) 1329
FaeI CATG 7 cut(s) 257, 664, 767, 817, 1164, 1226, 1282
FatI CATG 7 cut(s) 253, 660, 763, 813, 1160, 1222, 1278
FauI CCCGC 1 cut(s) 657
FblI GTMKAC 1 cut(s) 519
Fnu4HI GCNGC 4 cut(s) 556, 996, 1110, 1241
FokI GGATG 2 cut(s) 256, 659
FriOI GRGCYC 1 cut(s) 1019
Fsp4HI GCNGC 4 cut(s) 556, 996, 1110, 1241
FspBI CTAG 3 cut(s) 173, 423, 1040
GlaI GCGC 3 cut(s) 59, 61, 1270
GluI GCNGC 4 cut(s) 556, 996, 1110, 1241
HaeII RGCGCY 1 cut(s) 1272
HaeIII GGCC 2 cut(s) 28, 218
HapII CCGG 2 cut(s) 500, 620
HgaI GACGC 1 cut(s) 255
HhaI GCGC 3 cut(s) 60, 62, 1271
Hin1II CATG 7 cut(s) 257, 664, 767, 817, 1164, 1226, 1282
Hin6I GCGC 3 cut(s) 58, 60, 1269
HinP1I GCGC 3 cut(s) 58, 60, 1269
HincII GTYRAC 2 cut(s) 193, 1062
HindII GTYRAC 2 cut(s) 193, 1062
HinfI GANTC 3 cut(s) 88, 527, 1165
HpaI GTTAAC 1 cut(s) 193
HpaII CCGG 2 cut(s) 500, 620
HphI GGTGA 1 cut(s) 643
Hpy166II GTNNAC 5 cut(s) 103, 193, 520, 1062, 1137
Hpy188III TCNNGA 2 cut(s) 423, 620
Hpy8I GTNNAC 5 cut(s) 103, 193, 520, 1062, 1137
HpyAV CCTTC 2 cut(s) 637, 1107
HpyCH4III ACNGT 4 cut(s) 404, 496, 552, 739
HpyCH4IV ACGT 4 cut(s) 774, 971, 1190, 1322
HpyCH4V TGCA 6 cut(s) 329, 344, 716, 778, 813, 1240
HpyF10VI GCNNNNNNNGC 8 cut(s) 59, 461, 784, 810, 1001, 1115, 1266, 1275
HpyF3I CTNAG 4 cut(s) 465, 977, 989, 1013
HpySE526I ACGT 4 cut(s) 774, 971, 1190, 1322
Hsp92II CATG 7 cut(s) 257, 664, 767, 817, 1164, 1226, 1282
HspAI GCGC 3 cut(s) 58, 60, 1269
Kpn2I TCCGGA 1 cut(s) 619
KspAI GTTAAC 1 cut(s) 193
Kzo9I GATC 7 cut(s) 180, 307, 449, 541, 898, 1204, 1234
LmnI GCTCC 1 cut(s) 853
Lsp1109I GCAGC 4 cut(s) 542, 1007, 1096, 1252
LweI GCATC 6 cut(s) 316, 353, 725, 813, 1208, 1223
MaeI CTAG 3 cut(s) 173, 423, 1040
MaeII ACGT 4 cut(s) 774, 971, 1190, 1322
MaeIII GTNAC 4 cut(s) 70, 289, 301, 649
MalI GATC 7 cut(s) 182, 309, 451, 543, 900, 1206, 1236
MbiI CCGCTC 1 cut(s) 167
MboI GATC 7 cut(s) 180, 307, 449, 541, 898, 1204, 1234
MboII GAAGA 4 cut(s) 169, 302, 713, 1085
MflI RGATCY 4 cut(s) 307, 541, 1204, 1234
MhlI GDGCHC 1 cut(s) 1019
MluCI AATT 5 cut(s) 418, 512, 583, 669, 819
MmeI TCCRAC 1 cut(s) 1193
MroI TCCGGA 1 cut(s) 619
MroXI GAANNNNTTC 1 cut(s) 364
MseI TTAA 6 cut(s) 192, 603, 930, 1067, 1085, 1245
MslI CAYNNNNRTG 1 cut(s) 812
MspA1I CMGCKG 3 cut(s) 395, 464, 1118
MspCI CTTAAG 1 cut(s) 929
MspI CCGG 2 cut(s) 500, 620
MspR9I CCNGG 2 cut(s) 319, 908
MvaI CCWGG 2 cut(s) 319, 908
MvnI CGCG 2 cut(s) 60, 249
MwoI GCNNNNNNNGC 8 cut(s) 59, 461, 784, 810, 1001, 1115, 1266, 1275
NcoI CCATGG 2 cut(s) 763, 1160
NdeII GATC 7 cut(s) 180, 307, 449, 541, 898, 1204, 1234
NlaIII CATG 7 cut(s) 257, 664, 767, 817, 1164, 1226, 1282
NlaIV GGNNCC 3 cut(s) 145, 543, 758
NmeAIII GCCGAG 2 cut(s) 4, 780
NmuCI GTSAC 3 cut(s) 70, 301, 649
NspI RCATGY 1 cut(s) 817
PaeI GCATGC 1 cut(s) 817
PauI GCGCGC 1 cut(s) 58
PdmI GAANNNNTTC 1 cut(s) 364
PfeI GAWTC 3 cut(s) 88, 527, 1165
PflFI GACNNNGTC 1 cut(s) 249
PfoI TCCNGGA 2 cut(s) 317, 906
PkrI GCNGC 4 cut(s) 557, 997, 1111, 1242
Ppu21I YACGTR 1 cut(s) 775
PpuMI RGGWCCY 1 cut(s) 904
PshBI ATTAAT 1 cut(s) 1067
Psp1406I AACGTT 1 cut(s) 971
Psp5II RGGWCCY 1 cut(s) 904
Psp6I CCWGG 2 cut(s) 317, 906
PspGI CCWGG 2 cut(s) 317, 906
PspN4I GGNNCC 3 cut(s) 145, 543, 758
PspPI GGNCC 4 cut(s) 143, 321, 904, 1144
PspPPI RGGWCCY 1 cut(s) 904
PstI CTGCAG 1 cut(s) 1242
PstNI CAGNNNCTG 1 cut(s) 907
PsuI RGATCY 4 cut(s) 307, 541, 1204, 1234
PsyI GACNNNGTC 1 cut(s) 249
PteI GCGCGC 1 cut(s) 58
PvuII CAGCTG 2 cut(s) 395, 464
RsaI GTAC 4 cut(s) 268, 498, 927, 1193
RsaNI GTAC 4 cut(s) 267, 497, 926, 1192
RseI CAYNNNNRTG 1 cut(s) 812
SaqAI TTAA 6 cut(s) 192, 603, 930, 1067, 1085, 1245
SatI GCNGC 4 cut(s) 556, 996, 1110, 1241
Sau3AI GATC 7 cut(s) 180, 307, 449, 541, 898, 1204, 1234
Sau96I GGNCC 4 cut(s) 143, 321, 904, 1144
ScaI AGTACT 1 cut(s) 927
ScrFI CCNGG 2 cut(s) 319, 908
SduI GDGCHC 1 cut(s) 1019
SfaNI GCATC 6 cut(s) 316, 353, 725, 813, 1208, 1223
SfcI CTRYAG 2 cut(s) 459, 1238
SinI GGWCC 4 cut(s) 143, 321, 904, 1144
SmiMI CAYNNNNRTG 1 cut(s) 812
SmlI CTYRAG 5 cut(s) 212, 929, 999, 1175, 1264
SmoI CTYRAG 5 cut(s) 212, 929, 999, 1175, 1264
SphI GCATGC 1 cut(s) 817
Sse9I AATT 5 cut(s) 418, 512, 583, 669, 819
SsiI CCGC 5 cut(s) 167, 249, 664, 1118, 1313
SspMI CTAG 3 cut(s) 173, 423, 1040
StyD4I CCNGG 2 cut(s) 317, 906
StyI CCWWGG 3 cut(s) 120, 763, 1160
TaaI ACNGT 4 cut(s) 404, 496, 552, 739
TaiI ACGT 4 cut(s) 777, 974, 1193, 1325
TaqI TCGA 3 cut(s) 525, 827, 1032
TaqII GACCGA 1 cut(s) 338
TasI AATT 5 cut(s) 418, 512, 583, 669, 819
TatI WGTACW 2 cut(s) 266, 925
TfiI GAWTC 3 cut(s) 88, 527, 1165
Tru1I TTAA 6 cut(s) 192, 603, 930, 1067, 1085, 1245
Tru9I TTAA 6 cut(s) 192, 603, 930, 1067, 1085, 1245
TscAI CASTG 2 cut(s) 145, 744
TseFI GTSAC 3 cut(s) 70, 301, 649
TseI GCWGC 4 cut(s) 555, 995, 1109, 1240
Tsp45I GTSAC 3 cut(s) 70, 301, 649
TspDTI ATGAA 3 cut(s) 862, 1211, 1295
TspGWI ACGGA 2 cut(s) 893, 1090
TspRI CASTG 2 cut(s) 145, 744
Tth111I GACNNNGTC 1 cut(s) 249
Vha464I CTTAAG 1 cut(s) 929
VpaK11BI GGWCC 4 cut(s) 143, 321, 904, 1144
VspI ATTAAT 1 cut(s) 1067
XapI RAATTY 3 cut(s) 418, 512, 669
XbaI TCTAGA 1 cut(s) 422
XceI RCATGY 1 cut(s) 817
XcmI CCANNNNNNNNNTGG 1 cut(s) 1138
XmiI GTMKAC 1 cut(s) 519
XmnI GAANNNNTTC 1 cut(s) 364
XspI CTAG 3 cut(s) 173, 423, 1040
ZrmI AGTACT 1 cut(s) 927
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.