Prupe.1G467200_v2.0.a1

Belongs to the cyclin family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
38930117 .. 38935462
5346 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G467200.1

Sequence Viewer

Length: 1488 bp
ATGAATAAAGAAAATACAAATGCTGCCAAAGTTGAAGAGCCTACCGTCCGAATCACAAGGGCACGGGCTAAAGCCTTTGGCACTTCCGGGGAGGTAGTGTCCTCCTCAAAACCTTTCTTTAAACAAGATCAGAAGCATGGTGTTCGAGCAAATTCCAAAAGAGCAGCATCAGACGAGAACAAAGGATCTGCAATTGCCACCATTGGCTTGCAGCATAAAAGGAGGGCAGTTCTTAAAGATGTAGCAAACGTCATCTGTGAAAATTCATATGTGAAATGCACCACTGATGCCTCTCAGGTTCAGGCTAGTAAGCAGGCCAGAAGAGGTCTTGCAAAGAATGTAAAGGCAGCCTCAAATGTCTCGGAAGAAAGTACAGTGGTTCAAGAGGACGCAAAAGCAAAGTTAGCTGATGAATTATCCAAAATAAGGGTGGCAGAACCCCTAGAAGCCACTTTGCCAGTGAAGTTGGGAGAAAAAGAGCCAGTACCCCAGGGTATGTGTCATATCTTGGGACAACATAGAGGAGCAGATTTGATGCTTAGAGTACAGCCTTCCGCAGAACCTGCTGAACTTCAGAACCCCCAAAAGAAAGAAGAAAATATGATCTGGGAGATATTGGGATCCTCAAATGACCTGGACATCGTGGATATTGACTCAAACTTAAAGGATCCTCAAGCGTGCAGCTTGTATGCCCCTGATATATACAGTAATATAAGCCTTATAGAGGTGGAGCGAAGACCGTCAACTACTTATATGGAAACATTGCAGCAAGATATCACTCCAAGCATGCGAGGAATTTTGATTGATTGGCTTGTAGAGGTTTCCGAAGAATATAAGCTGGTTCCAGATACACTTTACCTCACAGTAAATCTCATTGATCGGTTTCTCTCTCACAATTATGTTGAAAAGCAAAGGCTTCAGCTGCTTGGAGTCACTTGCACGCTAATTGCCTCGAAGTATGAAGAAATATGTGCACCGCGAGTGGAAGAATTTTGCTTCATCACGGACAATACTTACTCAAGAGACGAGGTATTAGAAATGGAGAGTAAAGTTCTAAATTTCTTGCACTTCCAGTTATCTGTTCCCACCACAAAAACATTTCTTAGGAGGTTCATTCATGCAGCACAAGCTTCTTATAAGGTTCCTTGTGTTGAACTGGAGTTATTGGCAAATTATTTAGCAGAGTTGACTCTTGCTGAATATGGTTTCCTGAAGTTCCTACCTTCCCTCATTGCTGCCTCTGCTGTGTTCCTTGCCAGATGGACACTCGATCAGTCTGACCATCCATGGAATCCTACTTTAGAGCGCTATACCTCTTACAAAACATCAGAGCTCAAAACTACAGTTGTTGCACTAGAAGATTTGCAATTGAACACCAAGGGCTGTCCCCTAAATGCGATACGCGAGAAGTACAGACACCAGAAGTTCAAGTCTGTGGCTACTTTGACCTCCAAACAACGGGTGATTCGCTCTTTCCAAGATCAATAA

Protein Analysis

496

Amino Acids

55.75

Weight (kDa)

6.78

Isoelectric Point (pI)

47.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1137
Acc36I ACCTGC 1 cut(s) 571
AccII CGCG 2 cut(s) 979, 1404
AciI CCGC 2 cut(s) 555, 977
AclWI GGATC 5 cut(s) 193, 615, 628, 662, 675
AcsI RAATTY 5 cut(s) 151, 262, 795, 989, 1057
AcuI CTGAAG 3 cut(s) 557, 902, 1232
AfaI GTAC 4 cut(s) 373, 486, 546, 1412
AfeI AGCGCT 1 cut(s) 1307
AfiI CCNNNNNNNGG 3 cut(s) 426, 724, 1458
AgsI TTSAA 6 cut(s) 35, 383, 905, 1154, 1372, 1429
AjnI CCWGG 2 cut(s) 489, 633
AluBI AGCT 6 cut(s) 407, 684, 838, 922, 1130, 1333
AluI AGCT 6 cut(s) 407, 684, 838, 922, 1130, 1333
Alw21I GWGCWC 2 cut(s) 976, 1335
Alw26I GTCTC 2 cut(s) 364, 1017
Alw44I GTGCAC 1 cut(s) 972
AlwI GGATC 5 cut(s) 193, 615, 628, 662, 675
AlwNI CAGNNNCTG 1 cut(s) 563
Aor51HI AGCGCT 1 cut(s) 1307
AoxI GGCC 1 cut(s) 315
ApaLI GTGCAC 1 cut(s) 972
ApeKI GCWGC 9 cut(s) 23, 164, 211, 347, 681, 766, 922, 1121, 1235
ApoI RAATTY 5 cut(s) 151, 262, 795, 989, 1057
AspLEI GCGC 1 cut(s) 1308
AsuC2I CCSGG 1 cut(s) 88
AsuHPI GGTGA 1 cut(s) 1474
BaeGI GKGCMC 2 cut(s) 64, 976
BamHI GGATCC 2 cut(s) 620, 667
BanII GRGCYC 1 cut(s) 1335
BbsI GAAGAC 1 cut(s) 742
Bbv12I GWGCWC 2 cut(s) 976, 1335
BbvI GCAGC 9 cut(s) 10, 176, 223, 359, 693, 778, 909, 1133, 1222
BccI CCATC 2 cut(s) 1254, 1290
BcgI CGANNNNNNTGC 2 cut(s) 125, 159
BciT130I CCWGG 2 cut(s) 491, 635
BcnI CCSGG 1 cut(s) 88
BcoDI GTCTC 2 cut(s) 364, 1017
BfaI CTAG 3 cut(s) 306, 443, 1355
BfmI CTRYAG 1 cut(s) 1341
BfoI RGCGCY 1 cut(s) 1309
BfuAI ACCTGC 1 cut(s) 571
BisI GCNGC 9 cut(s) 24, 165, 212, 348, 682, 767, 923, 1122, 1236
BlsI GCNGC 9 cut(s) 25, 166, 213, 349, 683, 768, 924, 1123, 1237
Bme1390I CCNGG 3 cut(s) 88, 491, 635
BmiI GGNNCC 4 cut(s) 622, 669, 843, 1143
BmrFI CCNGG 3 cut(s) 88, 491, 635
BmsI GCATC 3 cut(s) 176, 277, 525
BpiI GAAGAC 1 cut(s) 742
BpmI CTGGAG 1 cut(s) 1178
BpuEI CTTGAG 2 cut(s) 657, 1003
BpuMI CCSGG 1 cut(s) 88
BsaJI CCNNGG 5 cut(s) 87, 489, 490, 1286, 1377
BsaXI ACNNNNNCTCC 2 cut(s) 83, 113
Bsc4I CCNNNNNNNGG 3 cut(s) 426, 724, 1458
Bse1I ACTGG 4 cut(s) 458, 482, 1072, 1161
Bse3DI GCAATG 2 cut(s) 761, 1230
BseBI CCWGG 2 cut(s) 491, 635
BseDI CCNNGG 5 cut(s) 87, 489, 490, 1286, 1377
BseGI GGATG 1 cut(s) 1282
BseLI CCNNNNNNNGG 3 cut(s) 426, 724, 1458
BseMI GCAATG 2 cut(s) 761, 1230
BseMII CTCAG 1 cut(s) 308
BseNI ACTGG 4 cut(s) 458, 482, 1072, 1161
BseRI GAGGAG 2 cut(s) 94, 537
BseSI GKGCMC 2 cut(s) 64, 976
BseXI GCAGC 9 cut(s) 10, 176, 223, 359, 693, 778, 909, 1133, 1222
BsgI GTGCAG 1 cut(s) 700
Bsh1236I CGCG 2 cut(s) 979, 1404
BshFI GGCC 1 cut(s) 317
BsiHKAI GWGCWC 2 cut(s) 976, 1335
BsiSI CCGG 1 cut(s) 87
BslFI GGGAC 2 cut(s) 525, 1371
BslI CCNNNNNNNGG 3 cut(s) 426, 724, 1458
BsmAI GTCTC 2 cut(s) 364, 1017
BsmBI CGTCTC 1 cut(s) 1017
BsmFI GGGAC 2 cut(s) 525, 1371
BsnI GGCC 1 cut(s) 317
Bsp1286I GDGCHC 3 cut(s) 64, 976, 1335
Bsp143I GATC 8 cut(s) 127, 185, 603, 620, 667, 877, 1270, 1480
Bsp19I CCATGG 1 cut(s) 1286
BspACI CCGC 2 cut(s) 555, 977
BspANI GGCC 1 cut(s) 317
BspCNI CTCAG 1 cut(s) 307
BspFNI CGCG 2 cut(s) 979, 1404
BspLI GGNNCC 4 cut(s) 622, 669, 843, 1143
BspMI ACCTGC 1 cut(s) 571
BspPI GGATC 5 cut(s) 193, 615, 628, 662, 675
BspQI GCTCTTC 1 cut(s) 30
BsrDI GCAATG 2 cut(s) 761, 1230
BsrI ACTGG 4 cut(s) 458, 482, 1072, 1161
BssECI CCNNGG 5 cut(s) 87, 489, 490, 1286, 1377
BssMI GATC 8 cut(s) 127, 185, 603, 620, 667, 877, 1270, 1480
BssT1I CCWWGG 2 cut(s) 1286, 1377
Bst2UI CCWGG 2 cut(s) 491, 635
Bst4CI ACNGT 6 cut(s) 46, 376, 707, 741, 865, 1345
Bst6I CTCTTC 2 cut(s) 30, 316
BstAPI GCANNNNNTGC 1 cut(s) 563
BstC8I GCNNGC 5 cut(s) 209, 315, 679, 788, 941
BstDEI CTNAG 3 cut(s) 294, 539, 1103
BstDSI CCRYGG 1 cut(s) 1286
BstENI CCTNNNNNAGG 1 cut(s) 722
BstF5I GGATG 1 cut(s) 1282
BstFNI CGCG 2 cut(s) 979, 1404
BstH2I RGCGCY 1 cut(s) 1309
BstHHI GCGC 1 cut(s) 1308
BstKTI GATC 8 cut(s) 130, 188, 606, 623, 670, 880, 1273, 1483
BstMAI GTCTC 2 cut(s) 364, 1017
BstMBI GATC 8 cut(s) 127, 185, 603, 620, 667, 877, 1270, 1480
BstMWI GCNNNNNNNGC 5 cut(s) 404, 563, 922, 1127, 1241
BstNI CCWGG 2 cut(s) 491, 635
BstNSI RCATGY 1 cut(s) 790
BstSCI CCNGG 3 cut(s) 86, 489, 633
BstSFI CTRYAG 1 cut(s) 1341
BstSLI GKGCMC 2 cut(s) 64, 976
BstUI CGCG 2 cut(s) 979, 1404
BstV1I GCAGC 9 cut(s) 10, 176, 223, 359, 693, 778, 909, 1133, 1222
BstV2I GAAGAC 1 cut(s) 742
BstX2I RGATCY 3 cut(s) 185, 620, 667
BstYI RGATCY 3 cut(s) 185, 620, 667
BsuRI GGCC 1 cut(s) 317
BtgI CCRYGG 1 cut(s) 1286
BtsCI GGATG 1 cut(s) 1282
BtsIMutI CAGTG 3 cut(s) 282, 381, 465
BveI ACCTGC 1 cut(s) 571
Cac8I GCNNGC 5 cut(s) 209, 315, 679, 788, 941
CaiI CAGNNNCTG 1 cut(s) 563
CfoI GCGC 1 cut(s) 1308
CseI GACGC 1 cut(s) 398
Csp6I GTAC 4 cut(s) 372, 485, 545, 1411
CviAII CATG 4 cut(s) 137, 787, 1118, 1287
CviQI GTAC 4 cut(s) 372, 485, 545, 1411
DdeI CTNAG 3 cut(s) 294, 539, 1103
DpnI GATC 8 cut(s) 129, 187, 605, 622, 669, 879, 1272, 1482
DpnII GATC 8 cut(s) 127, 185, 603, 620, 667, 877, 1270, 1480
DraI TTTAAA 1 cut(s) 121
Eam1104I CTCTTC 2 cut(s) 30, 316
EarI CTCTTC 2 cut(s) 30, 316
Ecl136II GAGCTC 1 cut(s) 1333
Eco130I CCWWGG 2 cut(s) 1286, 1377
Eco24I GRGCYC 1 cut(s) 1335
Eco32I GATATC 1 cut(s) 775
Eco47III AGCGCT 1 cut(s) 1307
Eco53kI GAGCTC 1 cut(s) 1333
Eco57I CTGAAG 3 cut(s) 557, 902, 1232
EcoICRI GAGCTC 1 cut(s) 1333
EcoNI CCTNNNNNAGG 1 cut(s) 722
EcoRII CCWGG 2 cut(s) 489, 633
EcoRV GATATC 1 cut(s) 775
EcoT14I CCWWGG 2 cut(s) 1286, 1377
EcoT38I GRGCYC 1 cut(s) 1335
ErhI CCWWGG 2 cut(s) 1286, 1377
Esp3I CGTCTC 1 cut(s) 1017
FaeI CATG 4 cut(s) 140, 790, 1121, 1290
FaqI GGGAC 2 cut(s) 525, 1371
FatI CATG 4 cut(s) 136, 786, 1117, 1286
FauNDI CATATG 1 cut(s) 268
Fnu4HI GCNGC 9 cut(s) 24, 165, 212, 348, 682, 767, 923, 1122, 1236
FokI GGATG 1 cut(s) 1269
FriOI GRGCYC 1 cut(s) 1335
Fsp4HI GCNGC 9 cut(s) 24, 165, 212, 348, 682, 767, 923, 1122, 1236
FspBI CTAG 3 cut(s) 306, 443, 1355
GlaI GCGC 1 cut(s) 1307
GluI GCNGC 9 cut(s) 24, 165, 212, 348, 682, 767, 923, 1122, 1236
GsuI CTGGAG 1 cut(s) 1178
HaeII RGCGCY 1 cut(s) 1309
HaeIII GGCC 1 cut(s) 317
HapII CCGG 1 cut(s) 87
HgaI GACGC 1 cut(s) 398
HhaI GCGC 1 cut(s) 1308
Hin1II CATG 4 cut(s) 140, 790, 1121, 1290
Hin6I GCGC 1 cut(s) 1306
HinP1I GCGC 1 cut(s) 1306
HincII GTYRAC 2 cut(s) 744, 1188
HindII GTYRAC 2 cut(s) 744, 1188
HindIII AAGCTT 1 cut(s) 1128
HinfI GANTC 6 cut(s) 51, 653, 930, 1189, 1291, 1465
HpaII CCGG 1 cut(s) 87
HphI GGTGA 1 cut(s) 1474
Hpy166II GTNNAC 3 cut(s) 744, 974, 1188
Hpy188I TCNGA 8 cut(s) 50, 132, 172, 364, 576, 826, 1279, 1330
Hpy188III TCNNGA 4 cut(s) 383, 845, 1020, 1210
Hpy8I GTNNAC 3 cut(s) 744, 974, 1188
HpyAV CCTTC 2 cut(s) 561, 1233
HpyCH4III ACNGT 6 cut(s) 46, 376, 707, 741, 865, 1345
HpyCH4IV ACGT 1 cut(s) 249
HpyF10VI GCNNNNNNNGC 5 cut(s) 404, 563, 922, 1127, 1241
HpyF3I CTNAG 3 cut(s) 294, 539, 1103
HpySE526I ACGT 1 cut(s) 249
Hsp92II CATG 4 cut(s) 140, 790, 1121, 1290
HspAI GCGC 1 cut(s) 1306
Kzo9I GATC 8 cut(s) 127, 185, 603, 620, 667, 877, 1270, 1480
LguI GCTCTTC 1 cut(s) 30
LmnI GCTCC 2 cut(s) 524, 730
Lsp1109I GCAGC 9 cut(s) 10, 176, 223, 359, 693, 778, 909, 1133, 1222
LweI GCATC 3 cut(s) 176, 277, 525
MaeI CTAG 3 cut(s) 306, 443, 1355
MaeII ACGT 1 cut(s) 249
MaeIII GTNAC 1 cut(s) 931
MalI GATC 8 cut(s) 129, 187, 605, 622, 669, 879, 1272, 1482
MboI GATC 8 cut(s) 127, 185, 603, 620, 667, 877, 1270, 1480
MboII GAAGA 9 cut(s) 47, 333, 377, 605, 747, 839, 974, 998, 1370
MfeI CAATTG 2 cut(s) 192, 1367
MflI RGATCY 3 cut(s) 185, 620, 667
MhlI GDGCHC 3 cut(s) 64, 976, 1335
MlyI GAGTC 3 cut(s) 647, 939, 1183
MseI TTAA 3 cut(s) 120, 234, 662
MslI CAYNNNNRTG 1 cut(s) 897
MspA1I CMGCKG 1 cut(s) 922
MspI CCGG 1 cut(s) 87
MspR9I CCNGG 3 cut(s) 88, 491, 635
MunI CAATTG 2 cut(s) 192, 1367
MvaI CCWGG 2 cut(s) 491, 635
MvnI CGCG 2 cut(s) 979, 1404
MwoI GCNNNNNNNGC 5 cut(s) 404, 563, 922, 1127, 1241
NciI CCSGG 1 cut(s) 88
NcoI CCATGG 1 cut(s) 1286
NdeI CATATG 1 cut(s) 268
NdeII GATC 8 cut(s) 127, 185, 603, 620, 667, 877, 1270, 1480
NlaIII CATG 4 cut(s) 140, 790, 1121, 1290
NlaIV GGNNCC 4 cut(s) 622, 669, 843, 1143
NmuCI GTSAC 1 cut(s) 931
NspI RCATGY 1 cut(s) 790
PaeI GCATGC 1 cut(s) 790
PasI CCCWGGG 1 cut(s) 490
PciSI GCTCTTC 1 cut(s) 30
PfeI GAWTC 3 cut(s) 51, 1291, 1465
PkrI GCNGC 9 cut(s) 25, 166, 213, 349, 683, 768, 924, 1123, 1237
PleI GAGTC 3 cut(s) 647, 938, 1183
PpsI GAGTC 3 cut(s) 647, 938, 1183
PsiI TTATAA 1 cut(s) 1137
Psp124BI GAGCTC 1 cut(s) 1335
Psp6I CCWGG 2 cut(s) 489, 633
PspGI CCWGG 2 cut(s) 489, 633
PspN4I GGNNCC 4 cut(s) 622, 669, 843, 1143
PstNI CAGNNNCTG 1 cut(s) 563
PsuI RGATCY 3 cut(s) 185, 620, 667
PvuII CAGCTG 1 cut(s) 922
RsaI GTAC 4 cut(s) 373, 486, 546, 1412
RsaNI GTAC 4 cut(s) 372, 485, 545, 1411
RseI CAYNNNNRTG 1 cut(s) 897
SacI GAGCTC 1 cut(s) 1335
SapI GCTCTTC 1 cut(s) 30
SaqAI TTAA 3 cut(s) 120, 234, 662
SatI GCNGC 9 cut(s) 24, 165, 212, 348, 682, 767, 923, 1122, 1236
Sau3AI GATC 8 cut(s) 127, 185, 603, 620, 667, 877, 1270, 1480
SchI GAGTC 3 cut(s) 647, 939, 1183
ScrFI CCNGG 3 cut(s) 88, 491, 635
SduI GDGCHC 3 cut(s) 64, 976, 1335
SfaNI GCATC 3 cut(s) 176, 277, 525
SfcI CTRYAG 1 cut(s) 1341
SmiMI CAYNNNNRTG 1 cut(s) 897
SmlI CTYRAG 2 cut(s) 672, 1018
SmoI CTYRAG 2 cut(s) 672, 1018
SphI GCATGC 1 cut(s) 790
SsiI CCGC 2 cut(s) 555, 977
SspMI CTAG 3 cut(s) 306, 443, 1355
SstI GAGCTC 1 cut(s) 1335
StyD4I CCNGG 3 cut(s) 86, 489, 633
StyI CCWWGG 2 cut(s) 1286, 1377
TaaI ACNGT 6 cut(s) 46, 376, 707, 741, 865, 1345
TaiI ACGT 1 cut(s) 252
TaqI TCGA 3 cut(s) 145, 953, 1269
TatI WGTACW 3 cut(s) 371, 544, 1410
TfiI GAWTC 3 cut(s) 51, 1291, 1465
Tru1I TTAA 3 cut(s) 120, 234, 662
Tru9I TTAA 3 cut(s) 120, 234, 662
TscAI CASTG 3 cut(s) 289, 381, 465
TseFI GTSAC 1 cut(s) 931
TseI GCWGC 9 cut(s) 23, 164, 211, 347, 681, 766, 922, 1121, 1235
Tsp45I GTSAC 1 cut(s) 931
TspDTI ATGAA 7 cut(s) 17, 255, 426, 975, 988, 1102, 1106
TspGWI ACGGA 1 cut(s) 1019
TspRI CASTG 3 cut(s) 289, 381, 465
VneI GTGCAC 1 cut(s) 972
XagI CCTNNNNNAGG 1 cut(s) 722
XapI RAATTY 5 cut(s) 151, 262, 795, 989, 1057
XceI RCATGY 1 cut(s) 790
XcmI CCANNNNNNNNNTGG 1 cut(s) 427
XspI CTAG 3 cut(s) 306, 443, 1355
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.