IQ-domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G18840 AT1G18840 AT1G18840 AT1G74690 |
| fragaria_vesca | FvH4_5g15290 FvH4_5g15290 FvH4_5g15290 FvH4_5g15290 |
| malus_domestica | MD06G1189500.v1.1 MD14G1196500.v1.1 |
| prunus_persica | Prupe.5G188300_v2.0.a1 |
| pyrus_communis | pycom06g16840 pycom14g16320 |
| rosa_chinensis | RchiOBHm_Chr7g0180771 |
| rosa_laevigata | RLG00000005231 |
| rosa_multiflora | Rmu_co8363381.1_g000001 Rmu_co8401147.1_g000001 Rmu_co8418241.1_g000001 Rmu_sc0007457.1_g000011 Rmu_sc0026332.1_g000002 Rmu_sc0030245.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00226750 Rroxscaffold_3G00272540 |
| rosa_rugosa | Rorug06G0435900 |
| rosa_samantha | Rh1AG249900 Rh7AG037600 Rh7BG037300 Rh7CG039000 Rh7DG037500 |
| rosa_wichuraiana | Rw7G003100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 1552 |
| AciI | CCGC | 4 cut(s) | 943, 1404, 1482, 1641 |
| AclWI | GGATC | 1 cut(s) | 153 |
| AcoI | YGGCCR | 1 cut(s) | 1281 |
| AcsI | RAATTY | 2 cut(s) | 315, 1339 |
| AcuI | CTGAAG | 2 cut(s) | 1206, 1557 |
| AdeI | CACNNNGTG | 1 cut(s) | 377 |
| AfaI | GTAC | 2 cut(s) | 33, 1038 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1574 |
| AgsI | TTSAA | 9 cut(s) | 125, 320, 385, 539, 717, 879, 954, 1097, 1415 |
| AhlI | ACTAGT | 1 cut(s) | 1439 |
| AjiI | CACGTC | 1 cut(s) | 377 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 923, 955 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 525, 557 |
| AluBI | AGCT | 9 cut(s) | 449, 631, 658, 665, 919, 939, 1346, 1461, 1495 |
| AluI | AGCT | 9 cut(s) | 449, 631, 658, 665, 919, 939, 1346, 1461, 1495 |
| Alw26I | GTCTC | 4 cut(s) | 188, 838, 1160, 1624 |
| AlwI | GGATC | 1 cut(s) | 153 |
| Ama87I | CYCGRG | 3 cut(s) | 1447, 1627, 1674 |
| AoxI | GGCC | 1 cut(s) | 1281 |
| ApeKI | GCWGC | 5 cut(s) | 167, 332, 350, 682, 936 |
| ApoI | RAATTY | 2 cut(s) | 315, 1339 |
| AspA2I | CCTAGG | 1 cut(s) | 1520 |
| AspS9I | GGNCC | 2 cut(s) | 250, 1218 |
| AsuC2I | CCSGG | 3 cut(s) | 1369, 1448, 1449 |
| AsuHPI | GGTGA | 1 cut(s) | 1509 |
| AvaI | CYCGRG | 3 cut(s) | 1447, 1627, 1674 |
| AvaII | GGWCC | 2 cut(s) | 250, 1218 |
| AvrII | CCTAGG | 1 cut(s) | 1520 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1179, 1211 |
| BauI | CACGAG | 1 cut(s) | 501 |
| BbvCI | CCTCAGC | 2 cut(s) | 765, 1496 |
| BbvI | GCAGC | 5 cut(s) | 179, 337, 344, 669, 948 |
| BccI | CCATC | 2 cut(s) | 58, 1576 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1447, 1481 |
| BciVI | GTATCC | 1 cut(s) | 356 |
| BcnI | CCSGG | 3 cut(s) | 1369, 1448, 1449 |
| BcoDI | GTCTC | 4 cut(s) | 188, 838, 1160, 1624 |
| BcuI | ACTAGT | 1 cut(s) | 1439 |
| BfaI | CTAG | 5 cut(s) | 60, 662, 1007, 1440, 1521 |
| BfmI | CTRYAG | 1 cut(s) | 966 |
| BfuI | GTATCC | 1 cut(s) | 356 |
| BisI | GCNGC | 5 cut(s) | 168, 333, 351, 683, 937 |
| BlnI | CCTAGG | 1 cut(s) | 1520 |
| BlsI | GCNGC | 5 cut(s) | 169, 334, 352, 684, 938 |
| Bme1390I | CCNGG | 3 cut(s) | 1369, 1448, 1449 |
| Bme18I | GGWCC | 2 cut(s) | 250, 1218 |
| BmeT110I | CYCGRG | 3 cut(s) | 1447, 1627, 1674 |
| BmgBI | CACGTC | 1 cut(s) | 377 |
| BmgT120I | GGNCC | 2 cut(s) | 250, 1218 |
| BmiI | GGNNCC | 2 cut(s) | 1080, 1219 |
| BmrFI | CCNGG | 3 cut(s) | 1369, 1448, 1449 |
| BmsI | GCATC | 3 cut(s) | 571, 749, 788 |
| Bpu10I | CCTNAGC | 2 cut(s) | 765, 1496 |
| BpuEI | CTTGAG | 4 cut(s) | 252, 941, 981, 1048 |
| BpuMI | CCSGG | 3 cut(s) | 1369, 1448, 1449 |
| BsaI | GGTCTC | 1 cut(s) | 838 |
| BsaJI | CCNNGG | 5 cut(s) | 424, 894, 1284, 1447, 1520 |
| BsaWI | WCCGGW | 1 cut(s) | 1699 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 525, 555 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1574 |
| Bse1I | ACTGG | 6 cut(s) | 180, 737, 758, 810, 1080, 1548 |
| BseDI | CCNNGG | 5 cut(s) | 424, 894, 1284, 1447, 1520 |
| BseGI | GGATG | 1 cut(s) | 1303 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1574 |
| BseNI | ACTGG | 6 cut(s) | 180, 737, 758, 810, 1080, 1548 |
| BseXI | GCAGC | 5 cut(s) | 179, 337, 344, 669, 948 |
| BseYI | CCCAGC | 1 cut(s) | 1346 |
| BsgI | GTGCAG | 1 cut(s) | 365 |
| BshFI | GGCC | 1 cut(s) | 1283 |
| BsiHKCI | CYCGRG | 3 cut(s) | 1447, 1627, 1674 |
| BsiSI | CCGG | 3 cut(s) | 1368, 1448, 1700 |
| BslFI | GGGAC | 5 cut(s) | 676, 854, 1231, 1546, 1657 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1574 |
| BsmAI | GTCTC | 4 cut(s) | 188, 838, 1160, 1624 |
| BsmBI | CGTCTC | 1 cut(s) | 188 |
| BsmFI | GGGAC | 5 cut(s) | 676, 854, 1231, 1546, 1657 |
| BsmI | GAATGC | 1 cut(s) | 1135 |
| BsnI | GGCC | 1 cut(s) | 1283 |
| Bso31I | GGTCTC | 1 cut(s) | 838 |
| BsoBI | CYCGRG | 3 cut(s) | 1447, 1627, 1674 |
| Bsp143I | GATC | 4 cut(s) | 145, 327, 513, 1003 |
| BspACI | CCGC | 4 cut(s) | 943, 1404, 1482, 1641 |
| BspANI | GGCC | 1 cut(s) | 1283 |
| BspLI | GGNNCC | 2 cut(s) | 1080, 1219 |
| BspPI | GGATC | 1 cut(s) | 153 |
| BspQI | GCTCTTC | 1 cut(s) | 1516 |
| BspTNI | GGTCTC | 1 cut(s) | 838 |
| BsrI | ACTGG | 6 cut(s) | 180, 737, 758, 810, 1080, 1548 |
| BssECI | CCNNGG | 5 cut(s) | 424, 894, 1284, 1447, 1520 |
| BssMI | GATC | 4 cut(s) | 145, 327, 513, 1003 |
| BssSI | CACGAG | 1 cut(s) | 501 |
| BssT1I | CCWWGG | 1 cut(s) | 1520 |
| Bst2BI | CACGAG | 1 cut(s) | 501 |
| Bst4CI | ACNGT | 4 cut(s) | 343, 981, 1171, 1688 |
| Bst6I | CTCTTC | 8 cut(s) | 848, 1137, 1182, 1254, 1302, 1516, 1668, 1706 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 377 |
| BstC8I | GCNNGC | 5 cut(s) | 12, 348, 447, 492, 1470 |
| BstDSI | CCRYGG | 1 cut(s) | 424 |
| BstF5I | GGATG | 1 cut(s) | 1303 |
| BstKTI | GATC | 4 cut(s) | 148, 330, 516, 1006 |
| BstMAI | GTCTC | 4 cut(s) | 188, 838, 1160, 1624 |
| BstMBI | GATC | 4 cut(s) | 145, 327, 513, 1003 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 377, 568, 679, 839, 942 |
| BstSCI | CCNGG | 3 cut(s) | 1367, 1446, 1447 |
| BstSFI | CTRYAG | 1 cut(s) | 966 |
| BstV1I | GCAGC | 5 cut(s) | 179, 337, 344, 669, 948 |
| BstX2I | RGATCY | 1 cut(s) | 145 |
| BstYI | RGATCY | 1 cut(s) | 145 |
| BsuI | GTATCC | 1 cut(s) | 356 |
| BsuRI | GGCC | 1 cut(s) | 1283 |
| BtgI | CCRYGG | 1 cut(s) | 424 |
| BtgZI | GCGATG | 1 cut(s) | 654 |
| BtrI | CACGTC | 1 cut(s) | 377 |
| BtsCI | GGATG | 1 cut(s) | 1303 |
| BtsIMutI | CAGTG | 2 cut(s) | 187, 1176 |
| Cac8I | GCNNGC | 5 cut(s) | 12, 348, 447, 492, 1470 |
| Cfr13I | GGNCC | 2 cut(s) | 250, 1218 |
| Cfr9I | CCCGGG | 1 cut(s) | 1447 |
| CseI | GACGC | 1 cut(s) | 205 |
| Csp6I | GTAC | 2 cut(s) | 32, 1037 |
| CviAII | CATG | 2 cut(s) | 212, 433 |
| CviQI | GTAC | 2 cut(s) | 32, 1037 |
| DpnI | GATC | 4 cut(s) | 147, 329, 515, 1005 |
| DpnII | GATC | 4 cut(s) | 145, 327, 513, 1003 |
| DraIII | CACNNNGTG | 1 cut(s) | 377 |
| EaeI | YGGCCR | 1 cut(s) | 1281 |
| Eam1104I | CTCTTC | 8 cut(s) | 848, 1137, 1182, 1254, 1302, 1516, 1668, 1706 |
| EarI | CTCTTC | 8 cut(s) | 848, 1137, 1182, 1254, 1302, 1516, 1668, 1706 |
| Eco130I | CCWWGG | 1 cut(s) | 1520 |
| Eco31I | GGTCTC | 1 cut(s) | 838 |
| Eco47I | GGWCC | 2 cut(s) | 250, 1218 |
| Eco57I | CTGAAG | 2 cut(s) | 1206, 1557 |
| Eco88I | CYCGRG | 3 cut(s) | 1447, 1627, 1674 |
| EcoRI | GAATTC | 1 cut(s) | 1339 |
| EcoT14I | CCWWGG | 1 cut(s) | 1520 |
| ErhI | CCWWGG | 1 cut(s) | 1520 |
| Esp3I | CGTCTC | 1 cut(s) | 188 |
| FaeI | CATG | 2 cut(s) | 215, 436 |
| FaqI | GGGAC | 5 cut(s) | 676, 854, 1231, 1546, 1657 |
| FatI | CATG | 2 cut(s) | 211, 432 |
| FauI | CCCGC | 1 cut(s) | 1634 |
| FblI | GTMKAC | 1 cut(s) | 1552 |
| Fnu4HI | GCNGC | 5 cut(s) | 168, 333, 351, 683, 937 |
| FokI | GGATG | 1 cut(s) | 1310 |
| Fsp4HI | GCNGC | 5 cut(s) | 168, 333, 351, 683, 937 |
| FspBI | CTAG | 5 cut(s) | 60, 662, 1007, 1440, 1521 |
| GluI | GCNGC | 5 cut(s) | 168, 333, 351, 683, 937 |
| GsaI | CCCAGC | 1 cut(s) | 1350 |
| HaeIII | GGCC | 1 cut(s) | 1283 |
| HapII | CCGG | 3 cut(s) | 1368, 1448, 1700 |
| HgaI | GACGC | 1 cut(s) | 205 |
| Hin1II | CATG | 2 cut(s) | 215, 436 |
| HincII | GTYRAC | 1 cut(s) | 1249 |
| HindII | GTYRAC | 1 cut(s) | 1249 |
| HindIII | AAGCTT | 1 cut(s) | 656 |
| HpaII | CCGG | 3 cut(s) | 1368, 1448, 1700 |
| HphI | GGTGA | 1 cut(s) | 1509 |
| Hpy166II | GTNNAC | 3 cut(s) | 32, 1249, 1553 |
| Hpy188III | TCNNGA | 9 cut(s) | 269, 287, 385, 751, 884, 1007, 1232, 1415, 1674 |
| Hpy8I | GTNNAC | 3 cut(s) | 32, 1249, 1553 |
| Hpy99I | CGWCG | 2 cut(s) | 233, 378 |
| HpyAV | CCTTC | 4 cut(s) | 435, 882, 1345, 1673 |
| HpyCH4III | ACNGT | 4 cut(s) | 343, 981, 1171, 1688 |
| HpyCH4IV | ACGT | 4 cut(s) | 376, 678, 1021, 1555 |
| HpyCH4V | TGCA | 9 cut(s) | 14, 167, 346, 490, 562, 1091, 1177, 1468, 1586 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 377, 568, 679, 839, 942 |
| HpySE526I | ACGT | 4 cut(s) | 376, 678, 1021, 1555 |
| Hsp92II | CATG | 2 cut(s) | 215, 436 |
| Kzo9I | GATC | 4 cut(s) | 145, 327, 513, 1003 |
| LguI | GCTCTTC | 1 cut(s) | 1516 |
| Lsp1109I | GCAGC | 5 cut(s) | 179, 337, 344, 669, 948 |
| LweI | GCATC | 3 cut(s) | 571, 749, 788 |
| MaeI | CTAG | 5 cut(s) | 60, 662, 1007, 1440, 1521 |
| MaeII | ACGT | 4 cut(s) | 376, 678, 1021, 1555 |
| MaeIII | GTNAC | 4 cut(s) | 337, 428, 1387, 1556 |
| MalI | GATC | 4 cut(s) | 147, 329, 515, 1005 |
| MboI | GATC | 4 cut(s) | 145, 327, 513, 1003 |
| MfeI | CAATTG | 1 cut(s) | 156 |
| MflI | RGATCY | 1 cut(s) | 145 |
| MluCI | AATT | 8 cut(s) | 84, 156, 315, 477, 712, 889, 1339, 1526 |
| MlyI | GAGTC | 3 cut(s) | 451, 1309, 1626 |
| MmeI | TCCRAC | 2 cut(s) | 277, 1090 |
| MseI | TTAA | 2 cut(s) | 23, 392 |
| MslI | CAYNNNNRTG | 1 cut(s) | 216 |
| MspA1I | CMGCKG | 1 cut(s) | 1346 |
| MspI | CCGG | 3 cut(s) | 1368, 1448, 1700 |
| MspR9I | CCNGG | 3 cut(s) | 1369, 1448, 1449 |
| MunI | CAATTG | 1 cut(s) | 156 |
| Mva1269I | GAATGC | 1 cut(s) | 1135 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 377, 568, 679, 839, 942 |
| NciI | CCSGG | 3 cut(s) | 1369, 1448, 1449 |
| NdeII | GATC | 4 cut(s) | 145, 327, 513, 1003 |
| NlaIII | CATG | 2 cut(s) | 215, 436 |
| NlaIV | GGNNCC | 2 cut(s) | 1080, 1219 |
| NmeAIII | GCCGAG | 2 cut(s) | 1309, 1432 |
| NmuCI | GTSAC | 1 cut(s) | 428 |
| PaeR7I | CTCGAG | 1 cut(s) | 1627 |
| PciSI | GCTCTTC | 1 cut(s) | 1516 |
| PctI | GAATGC | 1 cut(s) | 1135 |
| PfoI | TCCNGGA | 1 cut(s) | 1367 |
| PkrI | GCNGC | 5 cut(s) | 169, 334, 352, 684, 938 |
| PleI | GAGTC | 3 cut(s) | 451, 1309, 1625 |
| PpsI | GAGTC | 3 cut(s) | 451, 1309, 1625 |
| PspFI | CCCAGC | 1 cut(s) | 1346 |
| PspN4I | GGNNCC | 2 cut(s) | 1080, 1219 |
| PspPI | GGNCC | 2 cut(s) | 250, 1218 |
| PspXI | VCTCGAGB | 1 cut(s) | 1627 |
| PsuI | RGATCY | 1 cut(s) | 145 |
| PvuII | CAGCTG | 1 cut(s) | 1346 |
| RsaI | GTAC | 2 cut(s) | 33, 1038 |
| RsaNI | GTAC | 2 cut(s) | 32, 1037 |
| RseI | CAYNNNNRTG | 1 cut(s) | 216 |
| SapI | GCTCTTC | 1 cut(s) | 1516 |
| SaqAI | TTAA | 2 cut(s) | 23, 392 |
| SatI | GCNGC | 5 cut(s) | 168, 333, 351, 683, 937 |
| Sau3AI | GATC | 4 cut(s) | 145, 327, 513, 1003 |
| Sau96I | GGNCC | 2 cut(s) | 250, 1218 |
| SchI | GAGTC | 3 cut(s) | 451, 1309, 1626 |
| ScrFI | CCNGG | 3 cut(s) | 1369, 1448, 1449 |
| SfaNI | GCATC | 3 cut(s) | 571, 749, 788 |
| SfcI | CTRYAG | 1 cut(s) | 966 |
| Sfr274I | CTCGAG | 1 cut(s) | 1627 |
| SinI | GGWCC | 2 cut(s) | 250, 1218 |
| SlaI | CTCGAG | 1 cut(s) | 1627 |
| SmaI | CCCGGG | 1 cut(s) | 1449 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 216 |
| SmlI | CTYRAG | 5 cut(s) | 267, 920, 996, 1027, 1627 |
| SmoI | CTYRAG | 5 cut(s) | 267, 920, 996, 1027, 1627 |
| SpeI | ACTAGT | 1 cut(s) | 1439 |
| Sse9I | AATT | 8 cut(s) | 84, 156, 315, 477, 712, 889, 1339, 1526 |
| SsiI | CCGC | 4 cut(s) | 943, 1404, 1482, 1641 |
| SspMI | CTAG | 5 cut(s) | 60, 662, 1007, 1440, 1521 |
| StyD4I | CCNGG | 3 cut(s) | 1367, 1446, 1447 |
| StyI | CCWWGG | 1 cut(s) | 1520 |
| TaaI | ACNGT | 4 cut(s) | 343, 981, 1171, 1688 |
| TaiI | ACGT | 4 cut(s) | 379, 681, 1024, 1558 |
| TaqI | TCGA | 6 cut(s) | 455, 696, 828, 885, 1257, 1628 |
| TasI | AATT | 8 cut(s) | 84, 156, 315, 477, 712, 889, 1339, 1526 |
| TatI | WGTACW | 2 cut(s) | 31, 1036 |
| Tru1I | TTAA | 2 cut(s) | 23, 392 |
| Tru9I | TTAA | 2 cut(s) | 23, 392 |
| TscAI | CASTG | 2 cut(s) | 187, 1176 |
| TseFI | GTSAC | 1 cut(s) | 428 |
| TseI | GCWGC | 5 cut(s) | 167, 332, 350, 682, 936 |
| Tsp45I | GTSAC | 1 cut(s) | 428 |
| TspDTI | ATGAA | 6 cut(s) | 141, 228, 657, 1155, 1170, 1239 |
| TspGWI | ACGGA | 1 cut(s) | 413 |
| TspMI | CCCGGG | 1 cut(s) | 1447 |
| TspRI | CASTG | 2 cut(s) | 187, 1176 |
| VpaK11BI | GGWCC | 2 cut(s) | 250, 1218 |
| XapI | RAATTY | 2 cut(s) | 315, 1339 |
| XbaI | TCTAGA | 1 cut(s) | 1006 |
| XhoI | CTCGAG | 1 cut(s) | 1627 |
| XmaI | CCCGGG | 1 cut(s) | 1447 |
| XmaJI | CCTAGG | 1 cut(s) | 1520 |
| XmiI | GTMKAC | 1 cut(s) | 1552 |
| XspI | CTAG | 5 cut(s) | 60, 662, 1007, 1440, 1521 |