AT1G24400

lysine histidine transporter

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
8651407 .. 8653915
2509 bp
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UTR
Exon/CDS
Intron
AT1G24400.1

Sequence Viewer

Length: 1326 bp
ATGGGGAACAGTGAAATGTCAGCGAGTGAGGTTGCGGCGGCCAAGCAGAAGAACGTCGACGATTGGTTACCGATCACATCTTCCAGAAACGCTAAGTGGTGGTACTCTGCTTTTCACAATGTCACCGCCATGGTTGGTGCTGGTGTTCTTAGCTTGCCCTACGCTATGTCCAATCTCGGATGGGGACCTGGAGTGACGATTATGGTGATGTCATGGATCATAACGTTGTACACACTGTGGCAAATGGTGGAGATGCATGAGATTGTTCCAGGGAAGAGGCTTGATAGGTATCACGAGCTAGGTCAACACGCTTTTGGTGAAAAGCTTGGCCTATGGATCGTCGTGCCGCAGCAGCTTATCGTGGAGGTCGGTGTTGACATCGTTTATATGGTCACAGGAGGAGCATCCCTCAAGAAAGTCCATCAACTAGTCTGTCCCGATTGCAAAGAGATCAGAACTACGTTTTGGATCATGATCTTTGCTTCCGTCCACTTTGTTATCTCTCACCTTCCCAATTTCAACTCTATCTCCATCATCTCACTTGCCGCGGCTGTTATGTCCTTAACTTACTCAACTATTGCTTGGGCTGCATCCGTGCACAAAGGGGTACATCCAGATGTGGACTACTCTCCTAGAGCATCAACCGATGTTGGAAAAGTATTCAACTTCTTGAATGCGTTGGGAGATGTGGCTTTTGCTTATGCAGGTCACAACGTTGTGTTGGAGATTCAGGCCACAATCCCTTCGACTCCGGAGATGCCATCCAAGGTCCCAATGTGGAGAGGAGTTATTGTAGCCTACATTGTAGTCGCCATCTGTTACTTCCCTGTAGCATTCCTCGGCTATTATATCTTTGGAAACAGCGTTGATGACAACATCCTCATCACTTTGGAGAAGCCTATCTGGCTTATTGCTATGGCTAACATGTTCGTGGTTATCCATGTCATTGGAAGCTATCAGATATTTGCAATGCCAGTTTTTGACATGCTCGAAACCGTTTTGGTCAAAAAGATGAATTTCAATCCTTCTTTCAAGCTCCGCTTCATTACTCGTAGTCTTTACGTCGCTTTCACGATGATTGTTGCGATATGCGTCCCGTTTTTCGGTGGACTACTCGGCTTCTTTGGAGGATTCGCCTTTGCCCCAACAACTTACTACCTTCCATGCATTATGTGGCTCGTTCTCAAGAAACCAAAGAGGTTTGGTCTATCTTGGACAGCTAACTGGTTCTGCATCATAGTAGGAGTTCTTTTGACGATCCTTGCCCCAATTGGAGGACTCAGAACCATCATTATCAACGCCAAGACCTACAAGTTCTTCTCTTAG

Protein Analysis

441

Amino Acids

49.15

Weight (kDa)

8.86

Isoelectric Point (pI)

33.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aa_trans PF01490 30 - 424 1.1e-108 Transmembrane amino acid transporter protein
Trp_Tyr_perm PF03222 35 - 187 1.4e-08 Tryptophan/tyrosine permease family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 695
AccI GTMKAC 1 cut(s) 57
AccII CGCG 1 cut(s) 548
AccIII TCCGGA 1 cut(s) 751
AciI CCGC 7 cut(s) 35, 38, 126, 347, 546, 548, 1039
AclI AACGTT 2 cut(s) 224, 714
AclWI GGATC 4 cut(s) 224, 344, 476, 1252
AcoI YGGCCR 1 cut(s) 39
AcsI RAATTY 1 cut(s) 1015
AdeI CACNNNGTG 1 cut(s) 237
AfaI GTAC 3 cut(s) 104, 230, 609
AfiI CCNNNNNNNGG 2 cut(s) 1103, 1274
AflIII ACRYGT 1 cut(s) 924
AgsI TTSAA 5 cut(s) 520, 664, 673, 1021, 1033
AhlI ACTAGT 1 cut(s) 427
AjnI CCWGG 2 cut(s) 187, 268
AjuI GAANNNNNNNTTGG 2 cut(s) 448, 480
AluBI AGCT 7 cut(s) 153, 298, 325, 355, 954, 1036, 1220
AluI AGCT 7 cut(s) 153, 298, 325, 355, 954, 1036, 1220
Alw21I GWGCWC 1 cut(s) 600
Alw44I GTGCAC 1 cut(s) 596
AlwI GGATC 4 cut(s) 224, 344, 476, 1252
Aor13HI TCCGGA 1 cut(s) 751
AoxI GGCC 3 cut(s) 39, 328, 732
ApaLI GTGCAC 1 cut(s) 596
ApeKI GCWGC 3 cut(s) 349, 352, 587
ApoI RAATTY 1 cut(s) 1015
AspS9I GGNCC 2 cut(s) 185, 769
AsuHPI GGTGA 4 cut(s) 115, 217, 329, 497
AvaII GGWCC 2 cut(s) 185, 769
BaeGI GKGCMC 1 cut(s) 600
BauI CACGAG 1 cut(s) 293
Bbv12I GWGCWC 1 cut(s) 600
BbvI GCAGC 3 cut(s) 361, 364, 574
BccI CCATC 6 cut(s) 174, 429, 539, 769, 821, 1295
BciT130I CCWGG 2 cut(s) 189, 270
BcuI ACTAGT 1 cut(s) 427
BfaI CTAG 3 cut(s) 299, 428, 633
BfmI CTRYAG 1 cut(s) 828
BfuAI ACCTGC 1 cut(s) 695
BglI GCCNNNNNGGC 1 cut(s) 904
BisI GCNGC 8 cut(s) 36, 39, 347, 350, 353, 546, 549, 588
BlsI GCNGC 8 cut(s) 37, 40, 348, 351, 354, 547, 550, 589
Bme1390I CCNGG 2 cut(s) 189, 270
Bme18I GGWCC 2 cut(s) 185, 769
BmgT120I GGNCC 2 cut(s) 185, 769
BmiI GGNNCC 2 cut(s) 186, 771
BmrFI CCNGG 2 cut(s) 189, 270
BmsI GCATC 6 cut(s) 243, 413, 599, 647, 747, 1242
BplI GAGNNNNNCTC 2 cut(s) 393, 425
BpmI CTGGAG 1 cut(s) 210
BpuEI CTTGAG 2 cut(s) 395, 1169
BsaBI GATNNNNATC 2 cut(s) 288, 473
BsaJI CCNNGG 5 cut(s) 129, 269, 546, 765, 838
BsaWI WCCGGW 1 cut(s) 751
BsaXI ACNNNNNCTCC 4 cut(s) 512, 542, 777, 807
Bsc4I CCNNNNNNNGG 2 cut(s) 1103, 1274
Bse1I ACTGG 2 cut(s) 974, 1229
Bse3DI GCAATG 1 cut(s) 975
Bse8I GATNNNNATC 2 cut(s) 288, 473
BseAI TCCGGA 1 cut(s) 751
BseBI CCWGG 2 cut(s) 189, 270
BseDI CCNNGG 5 cut(s) 129, 269, 546, 765, 838
BseGI GGATG 6 cut(s) 185, 404, 590, 610, 761, 876
BseJI GATNNNNATC 2 cut(s) 288, 473
BseLI CCNNNNNNNGG 2 cut(s) 1103, 1274
BseMI GCAATG 1 cut(s) 975
BseMII CTCAG 1 cut(s) 1294
BseNI ACTGG 2 cut(s) 974, 1229
BseRI GAGGAG 2 cut(s) 414, 798
BseSI GKGCMC 1 cut(s) 600
BseXI GCAGC 3 cut(s) 361, 364, 574
Bsh1236I CGCG 1 cut(s) 548
BshFI GGCC 3 cut(s) 41, 330, 734
BsiHKAI GWGCWC 1 cut(s) 600
BsiSI CCGG 1 cut(s) 752
BslFI GGGAC 4 cut(s) 198, 420, 755, 1079
BslI CCNNNNNNNGG 2 cut(s) 1103, 1274
BsmFI GGGAC 4 cut(s) 198, 420, 755, 1079
BsmI GAATGC 2 cut(s) 679, 833
BsnI GGCC 3 cut(s) 41, 330, 734
Bsp1286I GDGCHC 1 cut(s) 600
Bsp13I TCCGGA 1 cut(s) 751
Bsp1407I TGTACA 1 cut(s) 228
Bsp143I GATC 7 cut(s) 72, 216, 336, 450, 468, 474, 1257
Bsp19I CCATGG 1 cut(s) 129
BspACI CCGC 7 cut(s) 35, 38, 126, 347, 546, 548, 1039
BspANI GGCC 3 cut(s) 41, 330, 734
BspCNI CTCAG 1 cut(s) 1293
BspEI TCCGGA 1 cut(s) 751
BspFNI CGCG 1 cut(s) 548
BspHI TCATGA 1 cut(s) 471
BspLI GGNNCC 2 cut(s) 186, 771
BspMI ACCTGC 1 cut(s) 695
BspPI GGATC 4 cut(s) 224, 344, 476, 1252
BsrDI GCAATG 1 cut(s) 975
BsrGI TGTACA 1 cut(s) 228
BsrI ACTGG 2 cut(s) 974, 1229
BssECI CCNNGG 5 cut(s) 129, 269, 546, 765, 838
BssMI GATC 7 cut(s) 72, 216, 336, 450, 468, 474, 1257
BssSI CACGAG 1 cut(s) 293
BssT1I CCWWGG 2 cut(s) 129, 765
Bst2BI CACGAG 1 cut(s) 293
Bst2UI CCWGG 2 cut(s) 189, 270
Bst4CI ACNGT 3 cut(s) 11, 237, 997
Bst6I CTCTTC 1 cut(s) 269
BstAUI TGTACA 1 cut(s) 228
BstC8I GCNNGC 1 cut(s) 155
BstDEI CTNAG 4 cut(s) 93, 149, 1280, 1323
BstDSI CCRYGG 2 cut(s) 129, 546
BstEII GGTNACC 1 cut(s) 66
BstF5I GGATG 6 cut(s) 185, 404, 590, 610, 761, 876
BstFNI CGCG 1 cut(s) 548
BstKTI GATC 7 cut(s) 75, 219, 339, 453, 471, 477, 1260
BstMBI GATC 7 cut(s) 72, 216, 336, 450, 468, 474, 1257
BstMWI GCNNNNNNNGC 3 cut(s) 352, 587, 904
BstNI CCWGG 2 cut(s) 189, 270
BstNSI RCATGY 2 cut(s) 928, 988
BstPI GGTNACC 1 cut(s) 66
BstSCI CCNGG 2 cut(s) 187, 268
BstSFI CTRYAG 1 cut(s) 828
BstSLI GKGCMC 1 cut(s) 600
BstUI CGCG 1 cut(s) 548
BstV1I GCAGC 3 cut(s) 361, 364, 574
BstXI CCANNNNNNTGG 1 cut(s) 947
BsuRI GGCC 3 cut(s) 41, 330, 734
BtgI CCRYGG 2 cut(s) 129, 546
BtsCI GGATG 6 cut(s) 185, 404, 590, 610, 761, 876
BtsIMutI CAGTG 2 cut(s) 16, 233
BveI ACCTGC 1 cut(s) 695
Cac8I GCNNGC 1 cut(s) 155
CciI TCATGA 1 cut(s) 471
Cfr13I GGNCC 2 cut(s) 185, 769
Cfr42I CCGCGG 1 cut(s) 549
CseI GACGC 1 cut(s) 1081
Csp6I GTAC 3 cut(s) 103, 229, 608
CviAII CATG 8 cut(s) 130, 213, 257, 472, 925, 941, 985, 1164
CviQI GTAC 3 cut(s) 103, 229, 608
DdeI CTNAG 4 cut(s) 93, 149, 1280, 1323
DpnI GATC 7 cut(s) 74, 218, 338, 452, 470, 476, 1259
DpnII GATC 7 cut(s) 72, 216, 336, 450, 468, 474, 1257
DraIII CACNNNGTG 1 cut(s) 237
EaeI YGGCCR 1 cut(s) 39
Eam1104I CTCTTC 1 cut(s) 269
EarI CTCTTC 1 cut(s) 269
Eco130I CCWWGG 2 cut(s) 129, 765
Eco47I GGWCC 2 cut(s) 185, 769
Eco91I GGTNACC 1 cut(s) 66
EcoO109I RGGNCCY 2 cut(s) 185, 769
EcoO65I GGTNACC 1 cut(s) 66
EcoRII CCWGG 2 cut(s) 187, 268
EcoT14I CCWWGG 2 cut(s) 129, 765
EcoT22I ATGCAT 2 cut(s) 258, 1169
ErhI CCWWGG 2 cut(s) 129, 765
FaeI CATG 8 cut(s) 133, 216, 260, 475, 928, 944, 988, 1167
FalI AAGNNNNNCTT 2 cut(s) 1025, 1057
FaqI GGGAC 4 cut(s) 198, 420, 755, 1079
FatI CATG 8 cut(s) 129, 212, 256, 471, 924, 940, 984, 1163
FblI GTMKAC 1 cut(s) 57
Fnu4HI GCNGC 8 cut(s) 36, 39, 347, 350, 353, 546, 549, 588
FokI GGATG 6 cut(s) 192, 391, 577, 597, 748, 863
Fsp4HI GCNGC 8 cut(s) 36, 39, 347, 350, 353, 546, 549, 588
FspBI CTAG 3 cut(s) 299, 428, 633
GluI GCNGC 8 cut(s) 36, 39, 347, 350, 353, 546, 549, 588
GsuI CTGGAG 1 cut(s) 210
HaeIII GGCC 3 cut(s) 41, 330, 734
HapII CCGG 1 cut(s) 752
HgaI GACGC 1 cut(s) 1081
Hin1II CATG 8 cut(s) 133, 216, 260, 475, 928, 944, 988, 1167
HincII GTYRAC 3 cut(s) 58, 305, 376
HindII GTYRAC 3 cut(s) 58, 305, 376
HindIII AAGCTT 1 cut(s) 323
HinfI GANTC 4 cut(s) 727, 748, 1131, 1278
HpaII CCGG 1 cut(s) 752
HphI GGTGA 4 cut(s) 115, 217, 329, 497
Hpy166II GTNNAC 8 cut(s) 58, 231, 305, 376, 490, 598, 622, 1109
Hpy188I TCNGA 4 cut(s) 179, 455, 960, 1283
Hpy8I GTNNAC 8 cut(s) 58, 231, 305, 376, 490, 598, 622, 1109
Hpy99I CGWCG 4 cut(s) 59, 62, 344, 1067
HpyAV CCTTC 4 cut(s) 518, 753, 1035, 1169
HpyCH4III ACNGT 3 cut(s) 11, 237, 997
HpyCH4IV ACGT 5 cut(s) 54, 224, 461, 714, 1062
HpyCH4V TGCA 8 cut(s) 256, 444, 590, 598, 704, 968, 1167, 1233
HpyF10VI GCNNNNNNNGC 3 cut(s) 352, 587, 904
HpyF3I CTNAG 4 cut(s) 93, 149, 1280, 1323
HpySE526I ACGT 5 cut(s) 54, 224, 461, 714, 1062
Hsp92II CATG 8 cut(s) 133, 216, 260, 475, 928, 944, 988, 1167
Kpn2I TCCGGA 1 cut(s) 751
KspI CCGCGG 1 cut(s) 549
Kzo9I GATC 7 cut(s) 72, 216, 336, 450, 468, 474, 1257
LmnI GCTCC 2 cut(s) 401, 1041
Lsp1109I GCAGC 3 cut(s) 361, 364, 574
LweI GCATC 6 cut(s) 243, 413, 599, 647, 747, 1242
MaeI CTAG 3 cut(s) 299, 428, 633
MaeII ACGT 5 cut(s) 54, 224, 461, 714, 1062
MaeIII GTNAC 6 cut(s) 66, 121, 193, 391, 707, 818
MalI GATC 7 cut(s) 74, 218, 338, 452, 470, 476, 1259
MboI GATC 7 cut(s) 72, 216, 336, 450, 468, 474, 1257
MboII GAAGA 4 cut(s) 61, 72, 286, 1309
MfeI CAATTG 1 cut(s) 1269
MhlI GDGCHC 1 cut(s) 600
MluCI AATT 3 cut(s) 514, 1015, 1269
MlyI GAGTC 2 cut(s) 742, 1272
MmeI TCCRAC 2 cut(s) 631, 702
Mph1103I ATGCAT 2 cut(s) 258, 1169
MroI TCCGGA 1 cut(s) 751
MseI TTAA 1 cut(s) 563
MslI CAYNNNNRTG 3 cut(s) 128, 615, 929
MspA1I CMGCKG 1 cut(s) 548
MspI CCGG 1 cut(s) 752
MspR9I CCNGG 2 cut(s) 189, 270
MunI CAATTG 1 cut(s) 1269
Mva1269I GAATGC 2 cut(s) 679, 833
MvaI CCWGG 2 cut(s) 189, 270
MvnI CGCG 1 cut(s) 548
MwoI GCNNNNNNNGC 3 cut(s) 352, 587, 904
NcoI CCATGG 1 cut(s) 129
NdeII GATC 7 cut(s) 72, 216, 336, 450, 468, 474, 1257
NlaIII CATG 8 cut(s) 133, 216, 260, 475, 928, 944, 988, 1167
NlaIV GGNNCC 2 cut(s) 186, 771
NmeAIII GCCGAG 2 cut(s) 819, 1095
NmuCI GTSAC 4 cut(s) 121, 193, 391, 707
NsiI ATGCAT 2 cut(s) 258, 1169
NspI RCATGY 2 cut(s) 928, 988
PagI TCATGA 1 cut(s) 471
PciI ACATGT 1 cut(s) 924
PctI GAATGC 2 cut(s) 679, 833
PfeI GAWTC 2 cut(s) 727, 1131
PkrI GCNGC 8 cut(s) 37, 40, 348, 351, 354, 547, 550, 589
PleI GAGTC 2 cut(s) 742, 1272
PpsI GAGTC 2 cut(s) 742, 1272
PpuMI RGGWCCY 2 cut(s) 185, 769
PscI ACATGT 1 cut(s) 924
Psp1406I AACGTT 2 cut(s) 224, 714
Psp5II RGGWCCY 2 cut(s) 185, 769
Psp6I CCWGG 2 cut(s) 187, 268
PspEI GGTNACC 1 cut(s) 66
PspGI CCWGG 2 cut(s) 187, 268
PspN4I GGNNCC 2 cut(s) 186, 771
PspPI GGNCC 2 cut(s) 185, 769
PspPPI RGGWCCY 2 cut(s) 185, 769
RsaI GTAC 3 cut(s) 104, 230, 609
RsaNI GTAC 3 cut(s) 103, 229, 608
RseI CAYNNNNRTG 3 cut(s) 128, 615, 929
SacII CCGCGG 1 cut(s) 549
SalI GTCGAC 1 cut(s) 56
SaqAI TTAA 1 cut(s) 563
SatI GCNGC 8 cut(s) 36, 39, 347, 350, 353, 546, 549, 588
Sau3AI GATC 7 cut(s) 72, 216, 336, 450, 468, 474, 1257
Sau96I GGNCC 2 cut(s) 185, 769
SchI GAGTC 2 cut(s) 742, 1272
ScrFI CCNGG 2 cut(s) 189, 270
SduI GDGCHC 1 cut(s) 600
SfaNI GCATC 6 cut(s) 243, 413, 599, 647, 747, 1242
SfcI CTRYAG 1 cut(s) 828
Sfr303I CCGCGG 1 cut(s) 549
SgrBI CCGCGG 1 cut(s) 549
SgrDI CGTCGACG 1 cut(s) 56
SinI GGWCC 2 cut(s) 185, 769
SmiMI CAYNNNNRTG 3 cut(s) 128, 615, 929
SmlI CTYRAG 2 cut(s) 410, 1184
SmoI CTYRAG 2 cut(s) 410, 1184
SpeI ACTAGT 1 cut(s) 427
Sse9I AATT 3 cut(s) 514, 1015, 1269
SsiI CCGC 7 cut(s) 35, 38, 126, 347, 546, 548, 1039
SspMI CTAG 3 cut(s) 299, 428, 633
StyD4I CCNGG 2 cut(s) 187, 268
StyI CCWWGG 2 cut(s) 129, 765
TaaI ACNGT 3 cut(s) 11, 237, 997
TaiI ACGT 5 cut(s) 57, 227, 464, 717, 1065
TaqI TCGA 3 cut(s) 57, 746, 990
TasI AATT 3 cut(s) 514, 1015, 1269
TatI WGTACW 1 cut(s) 228
TauI GCSGC 5 cut(s) 38, 41, 349, 548, 551
TfiI GAWTC 2 cut(s) 727, 1131
Tru1I TTAA 1 cut(s) 563
Tru9I TTAA 1 cut(s) 563
TscAI CASTG 2 cut(s) 16, 240
TseFI GTSAC 4 cut(s) 121, 193, 391, 707
TseI GCWGC 3 cut(s) 349, 352, 587
Tsp45I GTSAC 4 cut(s) 121, 193, 391, 707
TspDTI ATGAA 2 cut(s) 1028, 1033
TspGWI ACGGA 2 cut(s) 475, 583
TspRI CASTG 2 cut(s) 16, 240
VneI GTGCAC 1 cut(s) 596
VpaK11BI GGWCC 2 cut(s) 185, 769
XapI RAATTY 1 cut(s) 1015
XceI RCATGY 2 cut(s) 928, 988
XcmI CCANNNNNNNNNTGG 1 cut(s) 1170
XmiI GTMKAC 1 cut(s) 57
XspI CTAG 3 cut(s) 299, 428, 633
Zsp2I ATGCAT 2 cut(s) 258, 1169
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.