MD13G1111700.v1.1

Lysine histidine transporter

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr13
Physical Location & Seq
Forward (+)
8128072 .. 8131491
3420 bp
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UTR
Exon/CDS
Intron
MD13G1111700.v1.1.491

Sequence Viewer

Length: 1317 bp
ATGGCAGAATCATCGATGGAAGCCGAAGAGGCGAGGCAGAAGAAGATTGAGGATTGGCTTCCGGTCACTTCTTCTAGGAATGCCAAATGGTGGTACTCAGCTTTCCACAATGTCACTGCCATGGTTGGGGCTGGTGTCCTCAGCCTTCCGTATGCCATGTCTGAGCTTGGATGGGGTCCTGGTGTGGCTGTCATGCTTCTGTCATGGATCATCACCCTATACACACTGTGGCAAATGGTAGAGATGCATGAAATGGTGCCGGGGAAGCGGTTCGATCGGTACCACGAGCTGGGACAGTATGCCTTCGGGGAGAAGCTGGGGCTCTGGGTTGTGGTGCCCCAACAGCTCGTTGTGGAAGTTGGTGTCAATATTGTCTATATGGTCACAGGGGGAAAATCATTGAAGAAGTTCCATGATGTGATTTGCCCTAGCTGCAAAGACATCAAACTCACCTTATGGATTTTTATTTTTGCTTCTGTCCACTTCGTTATCTCCCACCTCCCCAACTTAAACTCCGTCTCTGGTATCTCACTTGCCGCTGCAGTCATGTCCTTGAGTTACTCAACGATTGCATGGGGAGCTGCCATACACAGGGGGAAGGCACCGGATGTGGACTACAGCTACAAAGCTAAATCCAATTCCGGAGCTGTCTTCAACTTCTTTAGTGGCTTGGGAGAGATAGCATTTGCCTATGCCGGCCACAATGTCGTTTTGGAGATCCAAGCAACGATTCCTTCCACACCCGAGAAGCCTTCCAAGGGACCAATGTGGAAAGGAGTGGTTGTGGCATACATTGTGGTGGCTTTGTGCTACTTCCCTGTTTCTTTTGTTGGCTACTATATTTACGGAAACACTGTTGAAGACAACGTCCTCATCTCACTCGAAAAACCTGTCTGGCTAATTGCAGCGGCTAACATGTTTGTTGTGATCCATGTCATTGGAAGCTACCAAGTTTTCGCAATGGGAGTTTTTGACATGGTTGAAACTTTTCTCGTCACGAAAATGAACTTTGAGCCTTCTTTCACCCTTCGCTTCGTTACTCGCACGACATATGTTGCATTTACCATGGTCGTCGGTATGGCCATCCCTTTCTTTGGTGGCCTTCTCGGATTCTTTGGAGGATTTGCTTTTGCCCCAACTACATACTTCCTTCCCTGCATCATGTGGCTCGCCATCTACAAACCTAGAGTTTTCAGTCTATCTTGGTTCATAAACTGGACATGCATTATACTGGGAGTTACCCTGATGATTCTAGCACCCATCGGTGCCCTACGGAGTATCATCTTGCAAGCGAAAACCTACAAATTCTTCTCTTAA

Protein Analysis

439

Amino Acids

48.78

Weight (kDa)

8.61

Isoelectric Point (pI)

35.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aa_trans PF01490 27 - 423 1.3e-102 Transmembrane amino acid transporter protein
Trp_Tyr_perm PF03222 32 - 159 3e-08 Tryptophan/tyrosine permease family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 279
AccB1I GGYRCC 5 cut(s) 256, 279, 334, 601, 1265
AccB7I CCANNNNNTGG 2 cut(s) 90, 289
AccIII TCCGGA 1 cut(s) 641
AciI CCGC 3 cut(s) 268, 537, 908
AclWI GGATC 3 cut(s) 215, 712, 922
AcoI YGGCCR 2 cut(s) 697, 1080
AcsI RAATTY 1 cut(s) 1304
AdeI CACNNNGTG 1 cut(s) 228
AfaI GTAC 2 cut(s) 95, 281
AfiI CCNNNNNNNGG 6 cut(s) 90, 126, 289, 591, 758, 1094
AflIII ACRYGT 1 cut(s) 915
AgsI TTSAA 4 cut(s) 403, 655, 860, 983
AjnI CCWGG 1 cut(s) 178
AjuI GAANNNNNNNTTGG 2 cut(s) 714, 746
Alw26I GTCTC 1 cut(s) 523
AlwI GGATC 3 cut(s) 215, 712, 922
Ama87I CYCGRG 1 cut(s) 743
Aor13HI TCCGGA 1 cut(s) 641
AoxI GGCC 3 cut(s) 697, 1080, 1099
ApeKI GCWGC 4 cut(s) 432, 539, 581, 905
ApoI RAATTY 1 cut(s) 1304
ArsI GACNNNNNNTTYG 2 cut(s) 876, 908
Asp700I GAANNNNTTC 3 cut(s) 269, 407, 987
Asp718I GGTACC 1 cut(s) 279
AspS9I GGNCC 2 cut(s) 176, 761
AsuC2I CCSGG 1 cut(s) 261
AsuHPI GGTGA 3 cut(s) 205, 442, 1015
AvaI CYCGRG 1 cut(s) 743
AvaII GGWCC 2 cut(s) 176, 761
BaeGI GKGCMC 2 cut(s) 339, 1270
BalI TGGCCA 1 cut(s) 1082
BanI GGYRCC 5 cut(s) 256, 279, 334, 601, 1265
BanII GRGCYC 1 cut(s) 324
BauI CACGAG 1 cut(s) 284
BbsI GAAGAC 2 cut(s) 643, 867
BbvCI CCTCAGC 1 cut(s) 140
BbvI GCAGC 4 cut(s) 419, 526, 568, 917
BccI CCATC 5 cut(s) 10, 165, 1091, 1181, 1268
BcgI CGANNNNNNTGC 1 cut(s) 28
BciT130I CCWGG 1 cut(s) 180
BcnI CCSGG 1 cut(s) 261
BcoDI GTCTC 1 cut(s) 523
BfaI CTAG 4 cut(s) 75, 429, 1185, 1253
BfmI CTRYAG 2 cut(s) 540, 616
BglI GCCNNNNNGGC 1 cut(s) 29
BisI GCNGC 6 cut(s) 433, 537, 540, 582, 906, 909
BlsI GCNGC 6 cut(s) 434, 538, 541, 583, 907, 910
Bme1390I CCNGG 2 cut(s) 180, 261
Bme18I GGWCC 2 cut(s) 176, 761
BmeT110I CYCGRG 1 cut(s) 743
BmgT120I GGNCC 2 cut(s) 176, 761
BmiI GGNNCC 7 cut(s) 177, 258, 281, 336, 603, 762, 1267
BmrFI CCNGG 2 cut(s) 180, 261
BmrI ACTGGG 1 cut(s) 1241
BmsI GCATC 2 cut(s) 234, 1167
BmuI ACTGGG 1 cut(s) 1241
BpiI GAAGAC 2 cut(s) 643, 867
Bpu10I CCTNAGC 1 cut(s) 140
BpuEI CTTGAG 1 cut(s) 574
BpuMI CCSGG 1 cut(s) 261
Bsa29I ATCGAT 1 cut(s) 14
BsaJI CCNNGG 4 cut(s) 120, 260, 756, 1065
BsaWI WCCGGW 3 cut(s) 61, 604, 641
BsaXI ACNNNNNCTCC 4 cut(s) 497, 527, 768, 798
Bsc4I CCNNNNNNNGG 6 cut(s) 90, 126, 289, 591, 758, 1094
Bse118I RCCGGY 1 cut(s) 695
Bse1I ACTGG 2 cut(s) 1220, 1236
Bse3DI GCAATG 1 cut(s) 966
BseAI TCCGGA 1 cut(s) 641
BseBI CCWGG 1 cut(s) 180
BseCI ATCGAT 1 cut(s) 14
BseDI CCNNGG 4 cut(s) 120, 260, 756, 1065
BseGI GGATG 3 cut(s) 176, 613, 1083
BseLI CCNNNNNNNGG 6 cut(s) 90, 126, 289, 591, 758, 1094
BseMI GCAATG 1 cut(s) 966
BseMII CTCAG 3 cut(s) 111, 153, 154
BseNI ACTGG 2 cut(s) 1220, 1236
BseSI GKGCMC 2 cut(s) 339, 1270
BseXI GCAGC 4 cut(s) 419, 526, 568, 917
BseYI CCCAGC 2 cut(s) 289, 316
Bsh1285I CGRYCG 1 cut(s) 277
BshFI GGCC 3 cut(s) 699, 1082, 1101
BshNI GGYRCC 5 cut(s) 256, 279, 334, 601, 1265
BshVI ATCGAT 1 cut(s) 14
BsiEI CGRYCG 1 cut(s) 277
BsiHKCI CYCGRG 1 cut(s) 743
BsiSI CCGG 5 cut(s) 62, 260, 605, 642, 696
BslFI GGGAC 2 cut(s) 306, 774
BslI CCNNNNNNNGG 6 cut(s) 90, 126, 289, 591, 758, 1094
BsmAI GTCTC 1 cut(s) 523
BsmBI CGTCTC 1 cut(s) 523
BsmFI GGGAC 2 cut(s) 306, 774
BsmI GAATGC 1 cut(s) 85
BsnI GGCC 3 cut(s) 699, 1082, 1101
BsoBI CYCGRG 1 cut(s) 743
Bsp1286I GDGCHC 3 cut(s) 324, 339, 1270
Bsp13I TCCGGA 1 cut(s) 641
Bsp143I GATC 4 cut(s) 207, 274, 717, 927
Bsp19I CCATGG 2 cut(s) 120, 1065
BspACI CCGC 3 cut(s) 268, 537, 908
BspANI GGCC 3 cut(s) 699, 1082, 1101
BspCNI CTCAG 3 cut(s) 110, 153, 154
BspDI ATCGAT 1 cut(s) 14
BspEI TCCGGA 1 cut(s) 641
BspLI GGNNCC 7 cut(s) 177, 258, 281, 336, 603, 762, 1267
BspMAI CTGCAG 1 cut(s) 544
BspPI GGATC 3 cut(s) 215, 712, 922
BspT107I GGYRCC 5 cut(s) 256, 279, 334, 601, 1265
BsrDI GCAATG 1 cut(s) 966
BsrFI RCCGGY 1 cut(s) 695
BsrI ACTGG 2 cut(s) 1220, 1236
BssAI RCCGGY 1 cut(s) 695
BssECI CCNNGG 4 cut(s) 120, 260, 756, 1065
BssMI GATC 4 cut(s) 207, 274, 717, 927
BssSI CACGAG 1 cut(s) 284
BssT1I CCWWGG 3 cut(s) 120, 756, 1065
Bst2BI CACGAG 1 cut(s) 284
Bst2UI CCWGG 1 cut(s) 180
Bst4CI ACNGT 3 cut(s) 228, 297, 856
Bst6I CTCTTC 1 cut(s) 21
BstC8I GCNNGC 3 cut(s) 697, 1170, 1290
BstDEI CTNAG 3 cut(s) 97, 140, 162
BstDSI CCRYGG 2 cut(s) 120, 1065
BstF5I GGATG 3 cut(s) 176, 613, 1083
BstKTI GATC 4 cut(s) 210, 277, 720, 930
BstMAI GTCTC 1 cut(s) 523
BstMBI GATC 4 cut(s) 207, 274, 717, 927
BstMCI CGRYCG 1 cut(s) 277
BstMWI GCNNNNNNNGC 5 cut(s) 29, 265, 343, 432, 578
BstNI CCWGG 1 cut(s) 180
BstNSI RCATGY 2 cut(s) 919, 1224
BstSCI CCNGG 2 cut(s) 178, 259
BstSFI CTRYAG 2 cut(s) 540, 616
BstSLI GKGCMC 2 cut(s) 339, 1270
BstV1I GCAGC 4 cut(s) 419, 526, 568, 917
BstV2I GAAGAC 2 cut(s) 643, 867
BstX2I RGATCY 1 cut(s) 717
BstXI CCANNNNNNTGG 1 cut(s) 938
BstYI RGATCY 1 cut(s) 717
Bsu15I ATCGAT 1 cut(s) 14
BsuRI GGCC 3 cut(s) 699, 1082, 1101
BsuTUI ATCGAT 1 cut(s) 14
BtgI CCRYGG 2 cut(s) 120, 1065
BtsCI GGATG 3 cut(s) 176, 613, 1083
BtsI GCAGTG 1 cut(s) 114
BtsIMutI CAGTG 3 cut(s) 114, 224, 852
Cac8I GCNNGC 3 cut(s) 697, 1170, 1290
Cfr10I RCCGGY 1 cut(s) 695
Cfr13I GGNCC 2 cut(s) 176, 761
ClaI ATCGAT 1 cut(s) 14
Csp6I GTAC 2 cut(s) 94, 280
CviQI GTAC 2 cut(s) 94, 280
DdeI CTNAG 3 cut(s) 97, 140, 162
DpnI GATC 4 cut(s) 209, 276, 719, 929
DpnII GATC 4 cut(s) 207, 274, 717, 927
DraIII CACNNNGTG 1 cut(s) 228
EaeI YGGCCR 2 cut(s) 697, 1080
Eam1104I CTCTTC 1 cut(s) 21
EarI CTCTTC 1 cut(s) 21
Eco130I CCWWGG 3 cut(s) 120, 756, 1065
Eco24I GRGCYC 1 cut(s) 324
Eco47I GGWCC 2 cut(s) 176, 761
Eco88I CYCGRG 1 cut(s) 743
EcoO109I RGGNCCY 1 cut(s) 176
EcoRII CCWGG 1 cut(s) 178
EcoT14I CCWWGG 3 cut(s) 120, 756, 1065
EcoT22I ATGCAT 2 cut(s) 249, 1226
EcoT38I GRGCYC 1 cut(s) 324
ErhI CCWWGG 3 cut(s) 120, 756, 1065
Esp3I CGTCTC 1 cut(s) 523
FaqI GGGAC 2 cut(s) 306, 774
FauNDI CATATG 1 cut(s) 1051
Fnu4HI GCNGC 6 cut(s) 433, 537, 540, 582, 906, 909
FokI GGATG 3 cut(s) 183, 620, 1070
FriOI GRGCYC 1 cut(s) 324
Fsp4HI GCNGC 6 cut(s) 433, 537, 540, 582, 906, 909
FspBI CTAG 4 cut(s) 75, 429, 1185, 1253
GluI GCNGC 6 cut(s) 433, 537, 540, 582, 906, 909
GsaI CCCAGC 2 cut(s) 293, 320
HaeIII GGCC 3 cut(s) 699, 1082, 1101
HapII CCGG 5 cut(s) 62, 260, 605, 642, 696
HinfI GANTC 4 cut(s) 8, 730, 1110, 1249
HpaII CCGG 5 cut(s) 62, 260, 605, 642, 696
HphI GGTGA 3 cut(s) 205, 442, 1015
Hpy166II GTNNAC 2 cut(s) 481, 613
Hpy188I TCNGA 2 cut(s) 163, 1109
Hpy188III TCNNGA 2 cut(s) 642, 997
Hpy8I GTNNAC 2 cut(s) 481, 613
Hpy99I CGWCG 1 cut(s) 1076
HpyAV CCTTC 9 cut(s) 155, 313, 592, 744, 762, 1026, 1037, 1112, 1160
HpyCH4III ACNGT 3 cut(s) 228, 297, 856
HpyCH4IV ACGT 1 cut(s) 867
HpyCH4V TGCA 9 cut(s) 247, 435, 542, 572, 905, 1058, 1158, 1224, 1288
HpyF10VI GCNNNNNNNGC 5 cut(s) 29, 265, 343, 432, 578
HpyF3I CTNAG 3 cut(s) 97, 140, 162
HpySE526I ACGT 1 cut(s) 867
Kpn2I TCCGGA 1 cut(s) 641
KpnI GGTACC 1 cut(s) 283
KroI GCCGGC 1 cut(s) 695
KroNI GCCGGC 1 cut(s) 697
Kzo9I GATC 4 cut(s) 207, 274, 717, 927
LmnI GCTCC 2 cut(s) 578, 644
Lsp1109I GCAGC 4 cut(s) 419, 526, 568, 917
LweI GCATC 2 cut(s) 234, 1167
MaeI CTAG 4 cut(s) 75, 429, 1185, 1253
MaeII ACGT 1 cut(s) 867
MaeIII GTNAC 7 cut(s) 64, 112, 382, 557, 994, 1036, 1237
MalI GATC 4 cut(s) 209, 276, 719, 929
MboI GATC 4 cut(s) 207, 274, 717, 927
MboII GAAGA 8 cut(s) 38, 52, 55, 63, 415, 643, 872, 1300
MflI RGATCY 1 cut(s) 717
MhlI GDGCHC 3 cut(s) 324, 339, 1270
MlsI TGGCCA 1 cut(s) 1082
MluCI AATT 3 cut(s) 637, 900, 1304
MluNI TGGCCA 1 cut(s) 1082
MnlI CCTC 7 cut(s) 22, 27, 43, 149, 509, 881, 1112
Mox20I TGGCCA 1 cut(s) 1082
Mph1103I ATGCAT 2 cut(s) 249, 1226
MroI TCCGGA 1 cut(s) 641
MroNI GCCGGC 1 cut(s) 695
MroXI GAANNNNTTC 3 cut(s) 269, 407, 987
MscI TGGCCA 1 cut(s) 1082
MseI TTAA 2 cut(s) 509, 1315
MslI CAYNNNNRTG 3 cut(s) 119, 797, 1001
Msp20I TGGCCA 1 cut(s) 1082
MspA1I CMGCKG 2 cut(s) 539, 908
MspI CCGG 5 cut(s) 62, 260, 605, 642, 696
MspR9I CCNGG 2 cut(s) 180, 261
Mva1269I GAATGC 1 cut(s) 85
MvaI CCWGG 1 cut(s) 180
MwoI GCNNNNNNNGC 5 cut(s) 29, 265, 343, 432, 578
NaeI GCCGGC 1 cut(s) 697
NciI CCSGG 1 cut(s) 261
NcoI CCATGG 2 cut(s) 120, 1065
NdeI CATATG 1 cut(s) 1051
NdeII GATC 4 cut(s) 207, 274, 717, 927
NgoMIV GCCGGC 1 cut(s) 695
NlaIV GGNNCC 7 cut(s) 177, 258, 281, 336, 603, 762, 1267
NmuCI GTSAC 4 cut(s) 64, 112, 382, 994
NsiI ATGCAT 2 cut(s) 249, 1226
NspI RCATGY 2 cut(s) 919, 1224
PciI ACATGT 1 cut(s) 915
PctI GAATGC 1 cut(s) 85
PdiI GCCGGC 1 cut(s) 697
PdmI GAANNNNTTC 3 cut(s) 269, 407, 987
PfeI GAWTC 4 cut(s) 8, 730, 1110, 1249
PflFI GACNNNGTC 1 cut(s) 866
PflMI CCANNNNNTGG 2 cut(s) 90, 289
PkrI GCNGC 6 cut(s) 434, 538, 541, 583, 907, 910
Ple19I CGATCG 1 cut(s) 277
PpuMI RGGWCCY 1 cut(s) 176
PscI ACATGT 1 cut(s) 915
Psp5II RGGWCCY 1 cut(s) 176
Psp6I CCWGG 1 cut(s) 178
PspFI CCCAGC 2 cut(s) 289, 316
PspGI CCWGG 1 cut(s) 178
PspN4I GGNNCC 7 cut(s) 177, 258, 281, 336, 603, 762, 1267
PspPI GGNCC 2 cut(s) 176, 761
PspPPI RGGWCCY 1 cut(s) 176
PstI CTGCAG 1 cut(s) 544
PsuI RGATCY 1 cut(s) 717
PsyI GACNNNGTC 1 cut(s) 866
PvuI CGATCG 1 cut(s) 277
RsaI GTAC 2 cut(s) 95, 281
RsaNI GTAC 2 cut(s) 94, 280
RseI CAYNNNNRTG 3 cut(s) 119, 797, 1001
SaqAI TTAA 2 cut(s) 509, 1315
SatI GCNGC 6 cut(s) 433, 537, 540, 582, 906, 909
Sau3AI GATC 4 cut(s) 207, 274, 717, 927
Sau96I GGNCC 2 cut(s) 176, 761
ScrFI CCNGG 2 cut(s) 180, 261
SduI GDGCHC 3 cut(s) 324, 339, 1270
SfaNI GCATC 2 cut(s) 234, 1167
SfcI CTRYAG 2 cut(s) 540, 616
SinI GGWCC 2 cut(s) 176, 761
SmiMI CAYNNNNRTG 3 cut(s) 119, 797, 1001
SmlI CTYRAG 1 cut(s) 553
SmoI CTYRAG 1 cut(s) 553
Sse9I AATT 3 cut(s) 637, 900, 1304
SsiI CCGC 3 cut(s) 268, 537, 908
SspI AATATT 1 cut(s) 370
SspMI CTAG 4 cut(s) 75, 429, 1185, 1253
StyD4I CCNGG 2 cut(s) 178, 259
StyI CCWWGG 3 cut(s) 120, 756, 1065
TaaI ACNGT 3 cut(s) 228, 297, 856
TaiI ACGT 1 cut(s) 870
TaqI TCGA 3 cut(s) 14, 273, 882
TasI AATT 3 cut(s) 637, 900, 1304
TauI GCSGC 2 cut(s) 539, 911
TfiI GAWTC 4 cut(s) 8, 730, 1110, 1249
Tru1I TTAA 2 cut(s) 509, 1315
Tru9I TTAA 2 cut(s) 509, 1315
TscAI CASTG 3 cut(s) 121, 231, 859
TseFI GTSAC 4 cut(s) 64, 112, 382, 994
TseI GCWGC 4 cut(s) 432, 539, 581, 905
Tsp45I GTSAC 4 cut(s) 64, 112, 382, 994
TspDTI ATGAA 3 cut(s) 264, 1019, 1198
TspGWI ACGGA 4 cut(s) 138, 505, 861, 1288
TspRI CASTG 3 cut(s) 121, 231, 859
Tth111I GACNNNGTC 1 cut(s) 866
Van91I CCANNNNNTGG 2 cut(s) 90, 289
VpaK11BI GGWCC 2 cut(s) 176, 761
XapI RAATTY 1 cut(s) 1304
XceI RCATGY 2 cut(s) 919, 1224
XmnI GAANNNNTTC 3 cut(s) 269, 407, 987
XspI CTAG 4 cut(s) 75, 429, 1185, 1253
Zsp2I ATGCAT 2 cut(s) 249, 1226
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.