AT1G30240

rRNA processing/ribosome biogenesis

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0004705
Physical Location & Seq
Reverse (-)
10641031 .. 10646195
5165 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G30240.1

Sequence Viewer

Length: 2478 bp
ATGGCGTCTTTTGAGCGTTTTGACGACATGTGTGACCTGAGATTGAAACCTAAGATTCTCCGAAACCTTCTCTCCGAATATGTTCCCAACGAGAAGCAGCCTCTCACCAACTTTCTATCACTCTCCAAGGTTGTATCAACCATCTCCACACACAAGCTCTTATCTGAGTCTCCTCCAGCTTCAATTGACCAGAAGCTTCATGCTAAATCGAAATCAGCCGTTGATGATTGGGTTGCTAGATTATCAGCTTTGATTTCTTCTGATATGCCGGATAAAAGCTGGGTGGGTATTTGTTTGATTGGAGTAACATGTCAAGAATGTAGCTCAGATCGTTTCTTTAAGTCATACTCTGTTTGGTTTAACAGTTTATTATCACATCTTAAGAATCCAGCAAGTTCTAGAATTGTCCGAGTGGCTTCATGTACCTCAATCTCTGATCTACTTACAAGGCTGTCTAGATTTTCGAATACGAAGAAAGATGCAGTTTCACACGCTTCGAAACTAATCCTGCCTATCATTAAATTATTGGATGAAGATTCTTCAGAAGCACTATTGGAAGGCATTGTCCATCTGCTAAGTACAATTGTACTCTTGTTTCCTGCTGCCTTCCACAGTAATTATGACAAGATTGAAGCCGCTATTGCCTCCAAAATATTTTCGGCGAAAACCAGTTCTAATATGTTAAAGAAATTTGCCCACTTTCTAGCATTGCTCCCCAAAGCTAAAGGTGACGAGGGCACCTGGTCCTTGATGATGCAAAAGCTGCTGATATCTATAAACGTACATTTAAATAATTTTTTCCAAGGTCTAGAAGAAGAAACAAAAGGAACAAAAGCAATCCAACGATTGACTCCTCCTGGAAAAGACTCTCCTTTGCCCCTCGGAGGTCAAAATGGGGGTTTGGATGATGCATCATGGAACTCTGAACAATTGATTGTATCCAGAGTTTCTGCACTTATGTTCTGCACCTCAACGATGTTAACTACCTCGTACAAATCCAAGATTAATATTCCAGTTGGCTCATTGTTATCCCTTGTTGAGCGAGTGCTGTTGGTGAACGGCTCTCTACCTCGAGCCATGTCACCCTTCATGACAGGGATCCAACAAGAATTGGTTTGTGCAGAACTTCCAGCTTTGCATTCGTCTGCTCTGGAACTCTTGTGCGCTACTTTAAAGAGTATCCGCAGCCAACTTTTACCATATGCTGCATCTGTGGTGAGACTTGTTAGTAGCTACTTCAGGAAATGTTCATTGCCAGAATTGAGGATAAAGCTCTACTCAATCACTACAACCTTACTCAAATCCATGGGAATGGCAATGCAACTGGCACAGGAAGTTGTCATTAATGCCTCTGTGGATCTAGACCAGACAAGTTTAGAAGCATTTGATGTGGCATCTAGCAAAAACCCCTCGCTTACTAATGGAGCTCTTCTTCAGGCTTGCAGTAAAAAAAGGAAGCATTCAGGAGTCGAGGCAGAAAATTCTGTTTTTGAATTGAGAATCCCTCACAATCACTTGAGAAGCCCGATTTCATTGAAAATAGCATCTCTTGAGGCACTGGAAACACTTCTCACCATTGGTGGTGCATTGGGATCGGATAGCTGGAGAGAGTCTGTTGATAATCTTCTTCTGACCACTGCAACAAATGCCTGTGAAGGGAGATGGGCCAATGCTGAAACCTACCATTGTTTACCCAATAAGTCTACGACGGATCTAGTTGAGTTTCAGCTTGCAGCACTCCGTGCCTTTTCGGCATCTCTCGTTTCTCCATCACGAGTACGCCCTGCATTTTTAGCTGAAGGACTTGAGCTTTTCAGAACAGGTAAACTTCAGGCAGGAATGAAAGTTGCTGGATTCTGTGCTCACGCTCTCATGTCCCTTGAAGTTGTTATACATCCGAGGGCACTTCCACTCGATGGCCTCCCGACACTTAGCAACCGATTTCCAGAGAGCAATTCTTTTGGCAGCGAAAAACACAACACACCTAATCTTAATAAGTTGAATGTTATTGCTCATGATGGTGATGATCTAGGCAATAGATGGCAGGCAAAGGCGGATGTTCCTTCTAACAATGCGATTCAGAGAACCTTAGACACGACTTTACCTCTCCAAGAGAGCAACAGATTGAAAGTTGGGAATGATTTAGCTACTGTCGTGTCTTTGAGTGTCCAAGATCATACAGATATAGTTGCATCAGAGAATGGTCAACAAGCTGATGTGCCTGAGAAGGTTCCTGAGGAATCTCTAGGACCGGTTACAGACAAAGATGTTACGGCTCCCAAAGATGGGTATGAAGAAGTGGTGAGTGGGACTCAAGAGGGAGAGGATTTAGCGGTTAAAGACAGTCTGATGGAGGAAGCATCAATTGGTAAGAAGATAGAGTCCTTAGGGGAATCTGATGATGATCCTATTCCTAGTCTTCAGGAAGGTGATTTTCTCTCCTCTTCTTCTGATTCTGATTCTGATATTGAATCGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RIX1

Protein Analysis

825

Amino Acids

89.73

Weight (kDa)

5.72

Isoelectric Point (pI)

40.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RIX1 PF08167 18 - 224 3e-41 rRNA processing/ribosome biogenesis
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 737
AccB7I CCANNNNNTGG 1 cut(s) 1916
AccI GTMKAC 1 cut(s) 1703
AciI CCGC 4 cut(s) 636, 1183, 2054, 2333
AclWI GGATC 6 cut(s) 1093, 1106, 1365, 1600, 1719, 2399
AcsI RAATTY 2 cut(s) 689, 1480
AcuI CTGAAG 6 cut(s) 525, 1222, 1418, 1814, 1818, 2405
AcyI GRCGYC 1 cut(s) 5
AdeI CACNNNGTG 1 cut(s) 1742
AfaI GTAC 6 cut(s) 424, 580, 588, 783, 992, 1779
AfiI CCNNNNNNNGG 5 cut(s) 884, 1656, 1916, 2285, 2286
AflII CTTAAG 1 cut(s) 380
AflIII ACRYGT 2 cut(s) 27, 308
AgeI ACCGGT 1 cut(s) 2251
AgsI TTSAA 9 cut(s) 46, 183, 632, 1493, 1537, 1883, 2002, 2128, 2471
AjnI CCWGG 2 cut(s) 740, 856
AjuI GAANNNNNNNTTGG 2 cut(s) 2349, 2381
Alw21I GWGCWC 2 cut(s) 1429, 1864
Alw26I GTCTC 2 cut(s) 174, 1213
AlwI GGATC 6 cut(s) 1093, 1106, 1365, 1600, 1719, 2399
Ama87I CYCGRG 1 cut(s) 1071
AoxI GGCC 2 cut(s) 1665, 1918
ApeKI GCWGC 7 cut(s) 97, 602, 763, 1185, 1205, 1733, 1965
ApoI RAATTY 2 cut(s) 689, 1480
AseI ATTAAT 2 cut(s) 1005, 1344
AsiGI ACCGGT 1 cut(s) 2251
Asp700I GAANNNNTTC 2 cut(s) 81, 1566
AspLEI GCGC 1 cut(s) 1166
AspS9I GGNCC 3 cut(s) 744, 1665, 2249
AsuHPI GGTGA 9 cut(s) 97, 740, 1066, 1074, 1228, 1564, 2033, 2314, 2441
AsuII TTCGAA 2 cut(s) 464, 497
AvaI CYCGRG 1 cut(s) 1071
AvaII GGWCC 2 cut(s) 744, 2249
AxyI CCTNAGG 2 cut(s) 2235, 2386
BaeGI GKGCMC 2 cut(s) 740, 1906
BamHI GGATCC 1 cut(s) 1098
BanI GGYRCC 1 cut(s) 737
BanII GRGCYC 1 cut(s) 1429
BarI GAAGNNNNNNTAC 2 cut(s) 1875, 1907
BauI CACGAG 1 cut(s) 1773
BbsI GAAGAC 1 cut(s) 2411
Bbv12I GWGCWC 2 cut(s) 1429, 1864
BbvI GCAGC 7 cut(s) 109, 589, 750, 1192, 1197, 1745, 1977
BccI CCATC 9 cut(s) 149, 576, 1656, 1777, 1910, 2012, 2034, 2279, 2344
BceAI ACGGC 3 cut(s) 203, 1075, 2289
BcgI CGANNNNNNTGC 2 cut(s) 1575, 1609
BciT130I CCWGG 2 cut(s) 742, 858
BciVI GTATCC 2 cut(s) 949, 1190
BcoDI GTCTC 2 cut(s) 174, 1213
BfrI CTTAAG 1 cut(s) 380
BfuI GTATCC 2 cut(s) 949, 1190
BglI GCCNNNNNGGC 1 cut(s) 1751
BisI GCNGC 8 cut(s) 98, 603, 636, 764, 1186, 1206, 1734, 1966
BlsI GCNGC 8 cut(s) 99, 604, 637, 765, 1187, 1207, 1735, 1967
Bme1390I CCNGG 2 cut(s) 742, 858
Bme18I GGWCC 2 cut(s) 744, 2249
BmeT110I CYCGRG 1 cut(s) 1071
BmgT120I GGNCC 3 cut(s) 744, 1665, 2249
BmiI GGNNCC 4 cut(s) 739, 1100, 2232, 2277
BmrFI CCNGG 2 cut(s) 742, 858
BpiI GAAGAC 1 cut(s) 2411
BplI GAGNNNNNCTC 4 cut(s) 1489, 1521, 2296, 2328
BpmI CTGGAG 2 cut(s) 159, 1624
Bpu14I TTCGAA 2 cut(s) 464, 497
BpuEI CTTGAG 4 cut(s) 1537, 1571, 1826, 2298
BsaBI GATNNNNATC 1 cut(s) 2403
BsaHI GRCGYC 1 cut(s) 5
BsaJI CCNNGG 5 cut(s) 126, 802, 880, 1305, 1898
BsaWI WCCGGW 1 cut(s) 2251
BsaXI ACNNNNNCTCC 2 cut(s) 56, 86
Bsc4I CCNNNNNNNGG 5 cut(s) 884, 1656, 1916, 2285, 2286
Bse118I RCCGGY 1 cut(s) 2251
Bse1I ACTGG 4 cut(s) 669, 1013, 1329, 1563
Bse21I CCTNAGG 2 cut(s) 2235, 2386
Bse3DI GCAATG 3 cut(s) 707, 1250, 1323
Bse8I GATNNNNATC 1 cut(s) 2403
BseBI CCWGG 2 cut(s) 742, 858
BseDI CCNNGG 5 cut(s) 126, 802, 880, 1305, 1898
BseGI GGATG 4 cut(s) 535, 910, 1894, 2062
BseJI GATNNNNATC 1 cut(s) 2403
BseLI CCNNNNNNNGG 5 cut(s) 884, 1656, 1916, 2285, 2286
BseMI GCAATG 3 cut(s) 707, 1250, 1323
BseMII CTCAG 5 cut(s) 29, 156, 339, 2214, 2226
BseNI ACTGG 4 cut(s) 669, 1013, 1329, 1563
BseRI GAGGAG 3 cut(s) 162, 843, 2431
BseSI GKGCMC 2 cut(s) 740, 1906
BseXI GCAGC 7 cut(s) 109, 589, 750, 1192, 1197, 1745, 1977
BseYI CCCAGC 1 cut(s) 279
BsgI GTGCAG 3 cut(s) 936, 949, 1140
BshFI GGCC 2 cut(s) 1667, 1920
BshNI GGYRCC 1 cut(s) 737
BshTI ACCGGT 1 cut(s) 2251
BsiHKAI GWGCWC 2 cut(s) 1429, 1864
BsiHKCI CYCGRG 1 cut(s) 1071
BsiSI CCGG 2 cut(s) 269, 2252
BslFI GGGAC 2 cut(s) 1861, 2323
BslI CCNNNNNNNGG 5 cut(s) 884, 1656, 1916, 2285, 2286
BsmAI GTCTC 2 cut(s) 174, 1213
BsmFI GGGAC 2 cut(s) 1861, 2323
BsmI GAATGC 2 cut(s) 1138, 1459
BsnI GGCC 2 cut(s) 1667, 1920
BsoBI CYCGRG 1 cut(s) 1071
Bsp119I TTCGAA 2 cut(s) 464, 497
Bsp1286I GDGCHC 4 cut(s) 740, 1429, 1864, 1906
Bsp143I GATC 9 cut(s) 328, 436, 1098, 1357, 1592, 1711, 2026, 2173, 2404
Bsp19I CCATGG 1 cut(s) 1305
BspACI CCGC 4 cut(s) 636, 1183, 2054, 2333
BspANI GGCC 2 cut(s) 1667, 1920
BspCNI CTCAG 5 cut(s) 30, 157, 338, 2215, 2227
BspHI TCATGA 2 cut(s) 1089, 2014
BspLI GGNNCC 4 cut(s) 739, 1100, 2232, 2277
BspPI GGATC 6 cut(s) 1093, 1106, 1365, 1600, 1719, 2399
BspQI GCTCTTC 1 cut(s) 1434
BspT104I TTCGAA 2 cut(s) 464, 497
BspT107I GGYRCC 1 cut(s) 737
BspTI CTTAAG 1 cut(s) 380
BsrDI GCAATG 3 cut(s) 707, 1250, 1323
BsrFI RCCGGY 1 cut(s) 2251
BsrI ACTGG 4 cut(s) 669, 1013, 1329, 1563
BssAI RCCGGY 1 cut(s) 2251
BssECI CCNNGG 5 cut(s) 126, 802, 880, 1305, 1898
BssMI GATC 9 cut(s) 328, 436, 1098, 1357, 1592, 1711, 2026, 2173, 2404
BssNI GRCGYC 1 cut(s) 5
BssSI CACGAG 1 cut(s) 1773
BssT1I CCWWGG 3 cut(s) 126, 802, 1305
Bst2BI CACGAG 1 cut(s) 1773
Bst2UI CCWGG 2 cut(s) 742, 858
Bst4CI ACNGT 4 cut(s) 365, 614, 2152, 2345
Bst6I CTCTTC 2 cut(s) 1434, 2449
BstACI GRCGYC 1 cut(s) 5
BstAFI CTTAAG 1 cut(s) 380
BstAPI GCANNNNNTGC 3 cut(s) 763, 1646, 1742
BstBI TTCGAA 2 cut(s) 464, 497
BstC8I GCNNGC 3 cut(s) 1441, 1731, 2046
BstDSI CCRYGG 1 cut(s) 1305
BstF5I GGATG 4 cut(s) 535, 910, 1894, 2062
BstHHI GCGC 1 cut(s) 1166
BstKTI GATC 9 cut(s) 331, 439, 1101, 1360, 1595, 1714, 2029, 2176, 2407
BstMAI GTCTC 2 cut(s) 174, 1213
BstMBI GATC 9 cut(s) 328, 436, 1098, 1357, 1592, 1711, 2026, 2173, 2404
BstMWI GCNNNNNNNGC 6 cut(s) 641, 763, 1646, 1742, 1751, 1793
BstNI CCWGG 2 cut(s) 742, 858
BstNSI RCATGY 2 cut(s) 31, 312
BstSCI CCNGG 2 cut(s) 740, 856
BstSLI GKGCMC 2 cut(s) 740, 1906
BstV1I GCAGC 7 cut(s) 109, 589, 750, 1192, 1197, 1745, 1977
BstV2I GAAGAC 1 cut(s) 2411
BstX2I RGATCY 3 cut(s) 1098, 1357, 1711
BstXI CCANNNNNNTGG 1 cut(s) 1312
BstYI RGATCY 3 cut(s) 1098, 1357, 1711
Bsu36I CCTNAGG 2 cut(s) 2235, 2386
BsuI GTATCC 2 cut(s) 949, 1190
BsuRI GGCC 2 cut(s) 1667, 1920
BtgI CCRYGG 1 cut(s) 1305
BtsCI GGATG 4 cut(s) 535, 910, 1894, 2062
BtsI GCAGTG 1 cut(s) 1635
BtsIMutI CAGTG 2 cut(s) 1556, 1635
Cac8I GCNNGC 3 cut(s) 1441, 1731, 2046
CciI TCATGA 2 cut(s) 1089, 2014
CfoI GCGC 1 cut(s) 1166
Cfr10I RCCGGY 1 cut(s) 2251
Cfr13I GGNCC 3 cut(s) 744, 1665, 2249
CsiI ACCWGGT 1 cut(s) 740
Csp6I GTAC 6 cut(s) 423, 579, 587, 782, 991, 1778
CspAI ACCGGT 1 cut(s) 2251
CviQI GTAC 6 cut(s) 423, 579, 587, 782, 991, 1778
DpnI GATC 9 cut(s) 330, 438, 1100, 1359, 1594, 1713, 2028, 2175, 2406
DpnII GATC 9 cut(s) 328, 436, 1098, 1357, 1592, 1711, 2026, 2173, 2404
DraI TTTAAA 2 cut(s) 789, 1173
DraIII CACNNNGTG 1 cut(s) 1742
Eam1104I CTCTTC 2 cut(s) 1434, 2449
EarI CTCTTC 2 cut(s) 1434, 2449
EciI GGCGGA 1 cut(s) 2069
Ecl136II GAGCTC 1 cut(s) 1427
Eco130I CCWWGG 3 cut(s) 126, 802, 1305
Eco24I GRGCYC 1 cut(s) 1429
Eco32I GATATC 1 cut(s) 771
Eco47I GGWCC 2 cut(s) 744, 2249
Eco53kI GAGCTC 1 cut(s) 1427
Eco57I CTGAAG 6 cut(s) 525, 1222, 1418, 1814, 1818, 2405
Eco81I CCTNAGG 2 cut(s) 2235, 2386
Eco88I CYCGRG 1 cut(s) 1071
EcoICRI GAGCTC 1 cut(s) 1427
EcoRII CCWGG 2 cut(s) 740, 856
EcoRV GATATC 1 cut(s) 771
EcoT14I CCWWGG 3 cut(s) 126, 802, 1305
EcoT22I ATGCAT 1 cut(s) 913
EcoT38I GRGCYC 1 cut(s) 1429
ErhI CCWWGG 3 cut(s) 126, 802, 1305
FaqI GGGAC 2 cut(s) 1861, 2323
FauNDI CATATG 1 cut(s) 1201
FblI GTMKAC 1 cut(s) 1703
Fnu4HI GCNGC 8 cut(s) 98, 603, 636, 764, 1186, 1206, 1734, 1966
FokI GGATG 4 cut(s) 542, 917, 1881, 2069
FriOI GRGCYC 1 cut(s) 1429
Fsp4HI GCNGC 8 cut(s) 98, 603, 636, 764, 1186, 1206, 1734, 1966
GlaI GCGC 1 cut(s) 1165
GluI GCNGC 8 cut(s) 98, 603, 636, 764, 1186, 1206, 1734, 1966
GsaI CCCAGC 1 cut(s) 283
GsuI CTGGAG 2 cut(s) 159, 1624
HaeIII GGCC 2 cut(s) 1667, 1920
HapII CCGG 2 cut(s) 269, 2252
HhaI GCGC 1 cut(s) 1166
Hin1I GRCGYC 1 cut(s) 5
Hin6I GCGC 1 cut(s) 1164
HinP1I GCGC 1 cut(s) 1164
HincII GTYRAC 2 cut(s) 981, 2207
HindII GTYRAC 2 cut(s) 981, 2207
HindIII AAGCTT 1 cut(s) 194
HpaI GTTAAC 1 cut(s) 981
HpaII CCGG 2 cut(s) 269, 2252
HphI GGTGA 9 cut(s) 97, 740, 1066, 1074, 1228, 1564, 2033, 2314, 2441
Hpy166II GTNNAC 6 cut(s) 981, 1057, 1691, 1704, 1826, 2207
Hpy8I GTNNAC 6 cut(s) 981, 1057, 1691, 1704, 1826, 2207
Hpy99I CGWCG 1 cut(s) 1711
HpyAV CCTTC 9 cut(s) 77, 551, 616, 1096, 1649, 1793, 2073, 2221, 2420
HpyCH4III ACNGT 4 cut(s) 365, 614, 2152, 2345
HpyCH4IV ACGT 1 cut(s) 780
HpyF10VI GCNNNNNNNGC 6 cut(s) 641, 763, 1646, 1742, 1751, 1793
HpySE526I ACGT 1 cut(s) 780
Hsp92I GRCGYC 1 cut(s) 5
HspAI GCGC 1 cut(s) 1164
KspAI GTTAAC 1 cut(s) 981
Kzo9I GATC 9 cut(s) 328, 436, 1098, 1357, 1592, 1711, 2026, 2173, 2404
LguI GCTCTTC 1 cut(s) 1434
LmnI GCTCC 3 cut(s) 717, 1424, 2281
Lsp1109I GCAGC 7 cut(s) 109, 589, 750, 1192, 1197, 1745, 1977
MabI ACCWGGT 1 cut(s) 740
MaeII ACGT 1 cut(s) 780
MaeIII GTNAC 6 cut(s) 32, 304, 728, 1080, 2254, 2269
MalI GATC 9 cut(s) 330, 438, 1100, 1359, 1594, 1713, 2028, 2175, 2406
MboI GATC 9 cut(s) 328, 436, 1098, 1357, 1592, 1711, 2026, 2173, 2404
MfeI CAATTG 4 cut(s) 183, 582, 929, 2364
MflI RGATCY 3 cut(s) 1098, 1357, 1711
MhlI GDGCHC 4 cut(s) 740, 1429, 1864, 1906
MlyI GAGTC 7 cut(s) 176, 844, 860, 1476, 1619, 2305, 2390
MmeI TCCRAC 2 cut(s) 865, 1126
Mph1103I ATGCAT 1 cut(s) 913
MroXI GAANNNNTTC 2 cut(s) 81, 1566
MslI CAYNNNNRTG 2 cut(s) 1310, 2019
MspCI CTTAAG 1 cut(s) 380
MspI CCGG 2 cut(s) 269, 2252
MspR9I CCNGG 2 cut(s) 742, 858
MunI CAATTG 4 cut(s) 183, 582, 929, 2364
Mva1269I GAATGC 2 cut(s) 1138, 1459
MvaI CCWGG 2 cut(s) 742, 858
MwoI GCNNNNNNNGC 6 cut(s) 641, 763, 1646, 1742, 1751, 1793
NcoI CCATGG 1 cut(s) 1305
NdeI CATATG 1 cut(s) 1201
NdeII GATC 9 cut(s) 328, 436, 1098, 1357, 1592, 1711, 2026, 2173, 2404
NlaIV GGNNCC 4 cut(s) 739, 1100, 2232, 2277
NmuCI GTSAC 3 cut(s) 32, 728, 1080
NsiI ATGCAT 1 cut(s) 913
NspI RCATGY 2 cut(s) 31, 312
NspV TTCGAA 2 cut(s) 464, 497
PaeR7I CTCGAG 1 cut(s) 1071
PagI TCATGA 2 cut(s) 1089, 2014
PciI ACATGT 2 cut(s) 27, 308
PciSI GCTCTTC 1 cut(s) 1434
PctI GAATGC 2 cut(s) 1138, 1459
PdmI GAANNNNTTC 2 cut(s) 81, 1566
PflMI CCANNNNNTGG 1 cut(s) 1916
PfoI TCCNGGA 1 cut(s) 856
PinAI ACCGGT 1 cut(s) 2251
PkrI GCNGC 8 cut(s) 99, 604, 637, 765, 1187, 1207, 1735, 1967
PleI GAGTC 7 cut(s) 175, 844, 860, 1475, 1618, 2305, 2389
PpsI GAGTC 7 cut(s) 175, 844, 860, 1475, 1618, 2305, 2389
PscI ACATGT 2 cut(s) 27, 308
PshBI ATTAAT 2 cut(s) 1005, 1344
Psp124BI GAGCTC 1 cut(s) 1429
Psp6I CCWGG 2 cut(s) 740, 856
PspFI CCCAGC 1 cut(s) 279
PspGI CCWGG 2 cut(s) 740, 856
PspN4I GGNNCC 4 cut(s) 739, 1100, 2232, 2277
PspPI GGNCC 3 cut(s) 744, 1665, 2249
PspXI VCTCGAGB 1 cut(s) 1071
PsuI RGATCY 3 cut(s) 1098, 1357, 1711
RsaI GTAC 6 cut(s) 424, 580, 588, 783, 992, 1779
RsaNI GTAC 6 cut(s) 423, 579, 587, 782, 991, 1778
RseI CAYNNNNRTG 2 cut(s) 1310, 2019
SacI GAGCTC 1 cut(s) 1429
SapI GCTCTTC 1 cut(s) 1434
SatI GCNGC 8 cut(s) 98, 603, 636, 764, 1186, 1206, 1734, 1966
Sau3AI GATC 9 cut(s) 328, 436, 1098, 1357, 1592, 1711, 2026, 2173, 2404
Sau96I GGNCC 3 cut(s) 744, 1665, 2249
SchI GAGTC 7 cut(s) 176, 844, 860, 1476, 1619, 2305, 2390
ScrFI CCNGG 2 cut(s) 742, 858
SduI GDGCHC 4 cut(s) 740, 1429, 1864, 1906
SexAI ACCWGGT 1 cut(s) 740
Sfr274I CTCGAG 1 cut(s) 1071
SfuI TTCGAA 2 cut(s) 464, 497
SinI GGWCC 2 cut(s) 744, 2249
SlaI CTCGAG 1 cut(s) 1071
SmiI ATTTAAAT 1 cut(s) 789
SmiMI CAYNNNNRTG 2 cut(s) 1310, 2019
SmlI CTYRAG 6 cut(s) 380, 1071, 1516, 1550, 1805, 2313
SmoI CTYRAG 6 cut(s) 380, 1071, 1516, 1550, 1805, 2313
SsiI CCGC 4 cut(s) 636, 1183, 2054, 2333
SspI AATATT 2 cut(s) 654, 1009
SstI GAGCTC 1 cut(s) 1429
StyD4I CCNGG 2 cut(s) 740, 856
StyI CCWWGG 3 cut(s) 126, 802, 1305
SwaI ATTTAAAT 1 cut(s) 789
TaaI ACNGT 4 cut(s) 365, 614, 2152, 2345
TaiI ACGT 1 cut(s) 783
TaqI TCGA 6 cut(s) 209, 464, 497, 1072, 1470, 1914
TatI WGTACW 2 cut(s) 578, 586
TauI GCSGC 1 cut(s) 638
TscAI CASTG 2 cut(s) 1563, 1642
TseFI GTSAC 3 cut(s) 32, 728, 1080
TseI GCWGC 7 cut(s) 97, 602, 763, 1185, 1205, 1733, 1965
Tsp45I GTSAC 3 cut(s) 32, 728, 1080
TspDTI ATGAA 8 cut(s) 188, 408, 546, 1078, 1239, 1521, 1856, 2307
TspGWI ACGGA 2 cut(s) 1724, 1730
TspRI CASTG 2 cut(s) 1563, 1642
Van91I CCANNNNNTGG 1 cut(s) 1916
Vha464I CTTAAG 1 cut(s) 380
VpaK11BI GGWCC 2 cut(s) 744, 2249
VspI ATTAAT 2 cut(s) 1005, 1344
XapI RAATTY 2 cut(s) 689, 1480
XbaI TCTAGA 4 cut(s) 398, 455, 808, 1360
XceI RCATGY 2 cut(s) 31, 312
XhoI CTCGAG 1 cut(s) 1071
XmiI GTMKAC 1 cut(s) 1703
XmnI GAANNNNTTC 2 cut(s) 81, 1566
Zsp2I ATGCAT 1 cut(s) 913
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.