Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr17

Orthogroup ID

OG0004705

Physical Location & Seq

Genomic Coordinates Reverse (-)

26046409 .. 26053986

Gene Structure 7578 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom17g27990.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2604 bp

ATGTACGATGTTGCTCTAAGGCCTCGTCTGTTGCAAACGCTCATCCGAGACCTCCCCGACGATAAACACCCGTCTGGGAGTCCATTGAAGCTGTCGAAGGTAGTCTACGCGATCAAAACCCACAACCTCCTTTGTGAGTCTGTACAAGATGTGACTGACCAACAGCTAATCACTACGTGGAAATCCGCTATTGATTCCTGGGTCCGTCGCTTGGTGCAGCTTGTTTCTAGTGACATGCCAGATAAATGTTGGGAAGGAATTTGTTTGATGGGGGTGACTTGTCGGGAATGCAGCTCTGAGCGGTTCTTGGAATCATACTCTGGTTGGTTCCAGATACTTCTATCACATATTCAGCCCACAACAACTTCTCAATTTGTGAAGGTGGCCTCTTGTGCCTCGATGTCAGATCTCATCACAAGGCTGGGTGGATCTCTAAATGCAAAAAGGGATGGAACTGCACCTGCCGGGAAACTTGTTCAGCAAATTATTCAACCAGTTTTGAAGTTGTTAAATGATGATCATTCAGAGGTTGTTTGGGAAGGAGCAGTTCAATTGTTATGCACAATTATATCTTTCTTTCCATTGAGCATCAATCGTCATTATGACAGTGTTGAAGATGTTATTGCTTCAACAATTTTGTCAGGAAAAGGAAGTGATAACATGCTGAAGAAACTTGCTCATTGCCTGGCATTACTACCAAAGTCAAGAGGGGATGAGGATAGCTGGTCCTTAATGATTCGGAAGATTTTATTGATGATTAACGGTCACCTGAATGATGTTTTCCAGGGGTTTGAGGAAGAAACGAAACGCCATGAAATTATTAGATTATTGATTCCCCAAGGAAAAGATCCCCCTCCTCAGTTGGGAGGAAATAAAGTGTCAGGAAAAGATTCAACAAAGGGAAGAAAGAGTTCTCAGCGTTTGACAATGTCCAGTATCTCTGCACTGATGGTTTGCTGCTCTACAATGATAACAACTTCGTACCCTGTTCAGGTGACTGTTCCTATTCGGTCCTTATTTGCCCTTATTGAGAGAGTGCTGATTGTGGATGGTTCCATCCCACACTCTCTGCTGCCCTTTATGACTGCCACACAGCAAGAGTTTATTTGTTCGGAACTACCACTTCTGCACCTGTATGGTTTAGAGTTCCTCACTGCTATTATAGAGGGCGTGCAAAGTCAACTTTTACCACATGCTGCTTATTTAGTGCATCTTCTTTCAGTGTACTTAAAGAGATGTGCATTGCCAGAATTAAGGATAAGGGTCTACTCAATCACAAGGATTTTGCTGATATCCATGGGTTTTGGCATGACAGTAAGCTTGGCACGGGAGGTTGCTAACAATGCTTTGATTGATCTGAATCCCATTGTGAATGAGAGTGGCGGTGCACCTTCTAGTGGATACTCAAAGCCTTATACTGAAGCATTGCTTCAAACAACACCACAATCTAGCCATAGAAAGAGGAAGCATGGAGATTCAAGCGGATCTCTTGAGTGGCATAAGACTAGTAGTTTGGGAGAGGGGAACCCCAAGAGCCATACGATATCTCCTATTCCTGTGAAAATCGCTGCACTTGAGGCATTAGAAGCTCTTGTGACTGTGGGTGGTGCGTTGAAATCTGAAGGATGGCGATCGGATGTTGGCCTTCTTCTGATGGACATAGCTACAAATTCTATGAAAGGGGGACGTGCTGGTGATAACAAAAACATATATCAGCTGAAGGAACCTGTTGATATCTGGGGTGATTTGCAGCTTGCTGCTCTACGTGCACTTTTGGCATCGTTACTTTCTTCATCTGGTGTCCGCCCCCCTTATTTAGCTGAGGGTCTCGATCTTTTCCGCAGAGGCAAGCAAGAAACTGGAACCAAAGTAGCTGGATTTTGTGCTCATTCTCTTTTGACCTTAGAGGTCCTTATACATCCCAGGGCACTCCCACTGGCAGGTTTCTCGGATGGAGTTAGCCACAAACTCCCAGAAAACATGTACTCTGGTAGTGTAAAGCACCAAACTCCGTTTTCAAGTGACATACAGGGAATGGTGTATGATGCTTCTGATTCAGATTGTGACGACCTATATAATAGCTGGCTTGCAACTGGTAAACAATTAGAAGCTCCGATGAGTGACCTAGACAAGACTCTGCGGGCGGGAGAGCCATCCAAAACTCTAACAGTTCATCAGGATAAAAAACTTGCTGTAGATGGTTCATTTGGAAAAGAGACTCTAGGAGGAAGTGCACAGGAGCTGAAATTATCCATTCAGGATGTGGAGATGAGAGTCAATGGGGATGAAAATATGGTTGAATGCTGCCAAGTTCAAGAATTTGCAGTGCAACTTGAGAATGGTCTGTCTTCAAAAGTTGGAGTTGCTGAAGAAGTCTTTGGGAGGGTTGCTCTAGGAAGTGGTCCATCTGATCAAGCAGGTAGCATTACGGTTGCAAGCCATGATGTTCCGGTGGCTAAAGGTGATGGGTTTCTTGGCAGAGAGAAGAATTCAGCGTCTACTTCAAATCCTGAGAAGGGCAAGGGAATTGCATATGAACTGGGTAATGATTCAGATGCGGATTCATTTCCTGATATTGTGGATCGAGATTCTGATTCTGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RIX1

Protein Analysis

868

Amino Acids

94.35

Weight (kDa)

5.86

Isoelectric Point (pI)

41.64

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004705)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30240 AT1G30240
fragaria_vesca	FvH4_5g22640 FvH4_5g22640 FvH4_5g22640 FvH4_5g22640 FvH4_5g22640 FvH4_5g22640 FvH4_5g22640
malus_domestica	MD09G1289100.v1.1 MD09G1289200.v1.1 MD09G1292100.v1.1 MD17G1284000.v1.1
prunus_persica	Prupe.3G003400_v2.0.a1 Prupe.6G159300_v2.0.a1
pyrus_communis	pycom09g19730 pycom17g27990
rosa_chinensis	RchiOBHm_Chr7g0211051
rosa_laevigata	RLG00000003025
rosa_multiflora	Rmu_sc0012670.1_g000007
rosa_roxburghii	Rroxscaffold_3G00248140
rosa_rugosa	Rorug07G0124000
rosa_samantha	Rh7AG255800 Rh7AG256000 Rh7AG256600 Rh7BG250200 Rh7CG272200 Rh7CG272400 Rh7CG273100 Rh7DG263000
rosa_wichuraiana	Rw7G021880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	469
Acc36I	ACCTGC	3 cut(s)	469, 1931, 2408
AccBSI	CCGCTC	1 cut(s)	301
AccI	GTMKAC	3 cut(s)	105, 1266, 2498
AccII	CGCG	1 cut(s)	110
AciI	CCGC	9 cut(s)	186, 301, 1383, 1482, 1804, 1840, 2140, 2144, 2558
AclWI	GGATC	4 cut(s)	436, 842, 1492, 2589
AcsI	RAATTY	4 cut(s)	258, 1669, 2318, 2488
AcuI	CTGAAG	5 cut(s)	686, 1440, 1641, 1739, 2388
AdeI	CACNNNGTG	1 cut(s)	177
AfaI	GTAC	5 cut(s)	5, 144, 983, 1226, 1985
AfiI	CCNNNNNNNGG	6 cut(s)	211, 863, 991, 1397, 1940, 2516
AflIII	ACRYGT	1 cut(s)	1980
AhlI	ACTAGT	1 cut(s)	1505
AjiI	CACGTC	1 cut(s)	1688
AjnI	CCWGG	4 cut(s)	197, 684, 783, 1922
AjuI	GAANNNNNNNTTGG	2 cut(s)	2361, 2393
Alw21I	GWGCWC	4 cut(s)	1390, 1771, 1888, 2236
Alw26I	GTCTC	3 cut(s)	42, 1832, 2210
Alw44I	GTGCAC	3 cut(s)	1386, 1767, 2232
AlwI	GGATC	4 cut(s)	436, 842, 1492, 2589
AlwNI	CAGNNNCTG	1 cut(s)	2242
AoxI	GGCC	3 cut(s)	20, 384, 1642
ApaLI	GTGCAC	3 cut(s)	1386, 1767, 2232
ApeKI	GCWGC	9 cut(s)	217, 291, 957, 1072, 1196, 1568, 1750, 1757, 2304
ApoI	RAATTY	4 cut(s)	258, 1669, 2318, 2488
ArsI	GACNNNNNNTTYG	2 cut(s)	1495, 1527
Asp700I	GAANNNNTTC	2 cut(s)	889, 910
AspS9I	GGNCC	5 cut(s)	202, 726, 1011, 1909, 2402
AsuC2I	CCSGG	1 cut(s)	466
AsuHPI	GGTGA	6 cut(s)	286, 758, 1006, 1706, 1754, 2474
AvaII	GGWCC	5 cut(s)	202, 726, 1011, 1909, 2402
BaeGI	GKGCMC	4 cut(s)	1390, 1771, 1930, 2236
BarI	GAAGNNNNNNTAC	2 cut(s)	89, 121
BbsI	GAAGAC	1 cut(s)	2340
Bbv12I	GWGCWC	4 cut(s)	1390, 1771, 1888, 2236
BbvCI	CCTCAGC	1 cut(s)	1821
BbvI	GCAGC	9 cut(s)	229, 303, 944, 1059, 1183, 1555, 1744, 1762, 2291
BcgI	CGANNNNNNTGC	2 cut(s)	1929, 1963
BciT130I	CCWGG	4 cut(s)	199, 686, 785, 1924
BciVI	GTATCC	1 cut(s)	1394
BclI	TGATCA	2 cut(s)	517, 2410
BcnI	CCSGG	1 cut(s)	466
BcoDI	GTCTC	3 cut(s)	42, 1832, 2210
BcuI	ACTAGT	1 cut(s)	1505
BfaI	CTAG	7 cut(s)	228, 1395, 1449, 1506, 2126, 2222, 2393
BfmI	CTRYAG	1 cut(s)	2193
BfuAI	ACCTGC	3 cut(s)	469, 1931, 2408
BfuI	GTATCC	1 cut(s)	1394
BglII	AGATCT	1 cut(s)	406
BisI	GCNGC	9 cut(s)	218, 292, 958, 1073, 1197, 1569, 1751, 1758, 2305
BlsI	GCNGC	9 cut(s)	219, 293, 959, 1074, 1198, 1570, 1752, 1759, 2306
Bme1390I	CCNGG	5 cut(s)	199, 466, 686, 785, 1924
Bme18I	GGWCC	5 cut(s)	202, 726, 1011, 1909, 2402
BmgBI	CACGTC	1 cut(s)	1688
BmgT120I	GGNCC	5 cut(s)	202, 726, 1011, 1909, 2402
BmiI	GGNNCC	6 cut(s)	203, 329, 1054, 1526, 1725, 1864
BmrFI	CCNGG	5 cut(s)	199, 466, 686, 785, 1924
BmrI	ACTGGG	1 cut(s)	2549
BmsI	GCATC	5 cut(s)	597, 1219, 1787, 2035, 2545
BmuI	ACTGGG	1 cut(s)	2549
BpiI	GAAGAC	1 cut(s)	2340
BplI	GAGNNNNNCTC	2 cut(s)	2374, 2406
Bpu10I	CCTNAGC	1 cut(s)	1821
BpuEI	CTTGAG	3 cut(s)	1511, 1595, 2354
BpuMI	CCSGG	1 cut(s)	466
BsaAI	YACGTR	2 cut(s)	177, 1766
BsaBI	GATNNNNATC	2 cut(s)	1359, 1630
BsaI	GGTCTC	2 cut(s)	42, 1832
BsaJI	CCNNGG	6 cut(s)	198, 784, 838, 1296, 1922, 1923
BsaWI	WCCGGW	1 cut(s)	2449
BsaXI	ACNNNNNCTCC	2 cut(s)	1531, 1561
Bsc4I	CCNNNNNNNGG	6 cut(s)	211, 863, 991, 1397, 1940, 2516
Bse1I	ACTGG	6 cut(s)	494, 933, 1864, 1941, 2098, 2544
Bse3DI	GCAATG	3 cut(s)	679, 1241, 1424
Bse8I	GATNNNNATC	2 cut(s)	1359, 1630
BseBI	CCWGG	4 cut(s)	199, 686, 785, 1924
BseDI	CCNNGG	6 cut(s)	198, 784, 838, 1296, 1922, 1923
BseJI	GATNNNNATC	2 cut(s)	1359, 1630
BseLI	CCNNNNNNNGG	6 cut(s)	211, 863, 991, 1397, 1940, 2516
BseMI	GCAATG	3 cut(s)	679, 1241, 1424
BseMII	CTCAG	5 cut(s)	288, 872, 929, 1812, 2502
BseNI	ACTGG	6 cut(s)	494, 933, 1864, 1941, 2098, 2544
BseRI	GAGGAG	1 cut(s)	846
BseSI	GKGCMC	4 cut(s)	1390, 1771, 1930, 2236
BseXI	GCAGC	9 cut(s)	229, 303, 944, 1059, 1183, 1555, 1744, 1762, 2291
BseYI	CCCAGC	1 cut(s)	421
BsgI	GTGCAG	5 cut(s)	236, 441, 927, 1112, 1554
Bsh1236I	CGCG	1 cut(s)	110
Bsh1285I	CGRYCG	1 cut(s)	1634
BshFI	GGCC	3 cut(s)	22, 386, 1644
BsiEI	CGRYCG	1 cut(s)	1634
BsiHKAI	GWGCWC	4 cut(s)	1390, 1771, 1888, 2236
BsiSI	CCGG	2 cut(s)	465, 2450
BslFI	GGGAC	1 cut(s)	1698
BslI	CCNNNNNNNGG	6 cut(s)	211, 863, 991, 1397, 1940, 2516
BsmAI	GTCTC	3 cut(s)	42, 1832, 2210
BsmFI	GGGAC	1 cut(s)	1698
BsmI	GAATGC	2 cut(s)	293, 2306
BsnI	GGCC	3 cut(s)	22, 386, 1644
Bso31I	GGTCTC	2 cut(s)	42, 1832
Bsp1286I	GDGCHC	5 cut(s)	1390, 1771, 1888, 1930, 2236
Bsp1407I	TGTACA	1 cut(s)	142
Bsp19I	CCATGG	1 cut(s)	1296
BspACI	CCGC	9 cut(s)	186, 301, 1383, 1482, 1804, 1840, 2140, 2144, 2558
BspANI	GGCC	3 cut(s)	22, 386, 1644
BspCNI	CTCAG	5 cut(s)	289, 871, 928, 1813, 2503
BspFNI	CGCG	1 cut(s)	110
BspLI	GGNNCC	6 cut(s)	203, 329, 1054, 1526, 1725, 1864
BspMI	ACCTGC	3 cut(s)	469, 1931, 2408
BspPI	GGATC	4 cut(s)	436, 842, 1492, 2589
BspTNI	GGTCTC	2 cut(s)	42, 1832
BsrBI	CCGCTC	1 cut(s)	301
BsrDI	GCAATG	3 cut(s)	679, 1241, 1424
BsrGI	TGTACA	1 cut(s)	142
BsrI	ACTGG	6 cut(s)	494, 933, 1864, 1941, 2098, 2544
BssECI	CCNNGG	6 cut(s)	198, 784, 838, 1296, 1922, 1923
BssT1I	CCWWGG	2 cut(s)	838, 1296
Bst2UI	CCWGG	4 cut(s)	199, 686, 785, 1924
Bst4CI	ACNGT	7 cut(s)	608, 764, 1000, 1315, 1600, 2170, 2431
BstAUI	TGTACA	1 cut(s)	142
BstBAI	YACGTR	2 cut(s)	177, 1766
BstC8I	GCNNGC	7 cut(s)	1172, 1755, 1850, 2084, 2088, 2142, 2437
BstDEI	CTNAG	7 cut(s)	17, 297, 858, 915, 1821, 1903, 2511
BstDSI	CCRYGG	1 cut(s)	1296
BstEII	GGTNACC	1 cut(s)	764
BstFNI	CGCG	1 cut(s)	110
BstMAI	GTCTC	3 cut(s)	42, 1832, 2210
BstMCI	CGRYCG	1 cut(s)	1634
BstMWI	GCNNNNNNNGC	6 cut(s)	392, 1343, 1577, 1586, 1766, 1775
BstNI	CCWGG	4 cut(s)	199, 686, 785, 1924
BstNSI	RCATGY	4 cut(s)	238, 664, 1196, 1984
BstPI	GGTNACC	1 cut(s)	764
BstSCI	CCNGG	5 cut(s)	197, 464, 684, 783, 1922
BstSFI	CTRYAG	1 cut(s)	2193
BstSLI	GKGCMC	4 cut(s)	1390, 1771, 1930, 2236
BstUI	CGCG	1 cut(s)	110
BstV1I	GCAGC	9 cut(s)	229, 303, 944, 1059, 1183, 1555, 1744, 1762, 2291
BstV2I	GAAGAC	1 cut(s)	2340
BstX2I	RGATCY	4 cut(s)	406, 428, 847, 1484
BstYI	RGATCY	4 cut(s)	406, 428, 847, 1484
BsuI	GTATCC	1 cut(s)	1394
BsuRI	GGCC	3 cut(s)	22, 386, 1644
BtgI	CCRYGG	1 cut(s)	1296
BtrI	CACGTC	1 cut(s)	1688
BtsI	GCAGTG	2 cut(s)	1152, 2331
BtsIMutI	CAGTG	6 cut(s)	613, 944, 1152, 1227, 1934, 2331
BveI	ACCTGC	3 cut(s)	469, 1931, 2408
Cac8I	GCNNGC	7 cut(s)	1172, 1755, 1850, 2084, 2088, 2142, 2437
CaiI	CAGNNNCTG	1 cut(s)	2242
Cfr13I	GGNCC	5 cut(s)	202, 726, 1011, 1909, 2402
CseI	GACGC	1 cut(s)	2484
Csp6I	GTAC	5 cut(s)	4, 143, 982, 1225, 1984
CviAII	CATG	9 cut(s)	235, 661, 812, 1193, 1297, 1309, 1469, 1981, 2441
CviQI	GTAC	5 cut(s)	4, 143, 982, 1225, 1984
DdeI	CTNAG	7 cut(s)	17, 297, 858, 915, 1821, 1903, 2511
DraIII	CACNNNGTG	1 cut(s)	177
EciI	GGCGGA	1 cut(s)	1793
Eco130I	CCWWGG	2 cut(s)	838, 1296
Eco147I	AGGCCT	1 cut(s)	22
Eco31I	GGTCTC	2 cut(s)	42, 1832
Eco32I	GATATC	3 cut(s)	1293, 1545, 1735
Eco47I	GGWCC	5 cut(s)	202, 726, 1011, 1909, 2402
Eco57I	CTGAAG	5 cut(s)	686, 1440, 1641, 1739, 2388
Eco91I	GGTNACC	1 cut(s)	764
EcoO109I	RGGNCCY	1 cut(s)	1909
EcoO65I	GGTNACC	1 cut(s)	764
EcoRI	GAATTC	1 cut(s)	2488
EcoRII	CCWGG	4 cut(s)	197, 684, 783, 1922
EcoRV	GATATC	3 cut(s)	1293, 1545, 1735
EcoT14I	CCWWGG	2 cut(s)	838, 1296
ErhI	CCWWGG	2 cut(s)	838, 1296
FaeI	CATG	9 cut(s)	238, 664, 815, 1196, 1300, 1312, 1472, 1984, 2444
FalI	AAGNNNNNCTT	2 cut(s)	1413, 1445
FaqI	GGGAC	1 cut(s)	1698
FatI	CATG	9 cut(s)	234, 660, 811, 1192, 1296, 1308, 1468, 1980, 2440
FauI	CCCGC	2 cut(s)	2133, 2137
FauNDI	CATATG	1 cut(s)	2533
FbaI	TGATCA	2 cut(s)	517, 2410
FblI	GTMKAC	3 cut(s)	105, 1266, 2498
Fnu4HI	GCNGC	9 cut(s)	218, 292, 958, 1073, 1197, 1569, 1751, 1758, 2305
Fsp4HI	GCNGC	9 cut(s)	218, 292, 958, 1073, 1197, 1569, 1751, 1758, 2305
FspBI	CTAG	7 cut(s)	228, 1395, 1449, 1506, 2126, 2222, 2393
GluI	GCNGC	9 cut(s)	218, 292, 958, 1073, 1197, 1569, 1751, 1758, 2305
GsaI	CCCAGC	1 cut(s)	425
HaeIII	GGCC	3 cut(s)	22, 386, 1644
HapII	CCGG	2 cut(s)	465, 2450
HgaI	GACGC	1 cut(s)	2484
Hin1II	CATG	9 cut(s)	238, 664, 815, 1196, 1300, 1312, 1472, 1984, 2444
HincII	GTYRAC	1 cut(s)	1181
HindII	GTYRAC	1 cut(s)	1181
HindIII	AAGCTT	1 cut(s)	1318
HpaII	CCGG	2 cut(s)	465, 2450
HphI	GGTGA	6 cut(s)	286, 758, 1006, 1706, 1754, 2474
Hpy166II	GTNNAC	9 cut(s)	106, 1181, 1225, 1267, 1388, 1769, 2099, 2234, 2499
Hpy8I	GTNNAC	9 cut(s)	106, 1181, 1225, 1267, 1388, 1769, 2099, 2234, 2499
Hpy99I	CGWCG	2 cut(s)	62, 210
HpyAV	CCTTC	9 cut(s)	91, 248, 373, 533, 1401, 1616, 1655, 1714, 2509
HpyCH4III	ACNGT	7 cut(s)	608, 764, 1000, 1315, 1600, 2170, 2431
HpyCH4IV	ACGT	3 cut(s)	176, 1687, 1765
HpyF10VI	GCNNNNNNNGC	6 cut(s)	392, 1343, 1577, 1586, 1766, 1775
HpyF3I	CTNAG	7 cut(s)	17, 297, 858, 915, 1821, 1903, 2511
HpySE526I	ACGT	3 cut(s)	176, 1687, 1765
Hsp92II	CATG	9 cut(s)	238, 664, 815, 1196, 1300, 1312, 1472, 1984, 2444
Ksp22I	TGATCA	2 cut(s)	517, 2410
LmnI	GCTCC	3 cut(s)	542, 2116, 2239
Lsp1109I	GCAGC	9 cut(s)	229, 303, 944, 1059, 1183, 1555, 1744, 1762, 2291
LweI	GCATC	5 cut(s)	597, 1219, 1787, 2035, 2545
MaeI	CTAG	7 cut(s)	228, 1395, 1449, 1506, 2126, 2222, 2393
MaeII	ACGT	3 cut(s)	176, 1687, 1765
MbiI	CCGCTC	1 cut(s)	301
MfeI	CAATTG	1 cut(s)	551
MflI	RGATCY	4 cut(s)	406, 428, 847, 1484
MhlI	GDGCHC	5 cut(s)	1390, 1771, 1888, 1930, 2236
MlyI	GAGTC	5 cut(s)	88, 146, 2128, 2212, 2283
MmeI	TCCRAC	1 cut(s)	2338
MroXI	GAANNNNTTC	2 cut(s)	889, 910
MseI	TTAA	5 cut(s)	509, 731, 759, 1229, 1253
MslI	CAYNNNNRTG	2 cut(s)	771, 1134
MspA1I	CMGCKG	1 cut(s)	1717
MspI	CCGG	2 cut(s)	465, 2450
MspR9I	CCNGG	5 cut(s)	199, 466, 686, 785, 1924
MunI	CAATTG	1 cut(s)	551
Mva1269I	GAATGC	2 cut(s)	293, 2306
MvaI	CCWGG	4 cut(s)	199, 686, 785, 1924
MvnI	CGCG	1 cut(s)	110
MwoI	GCNNNNNNNGC	6 cut(s)	392, 1343, 1577, 1586, 1766, 1775
NciI	CCSGG	1 cut(s)	466
NcoI	CCATGG	1 cut(s)	1296
NdeI	CATATG	1 cut(s)	2533
NlaIII	CATG	9 cut(s)	238, 664, 815, 1196, 1300, 1312, 1472, 1984, 2444
NlaIV	GGNNCC	6 cut(s)	203, 329, 1054, 1526, 1725, 1864
NmuCI	GTSAC	9 cut(s)	151, 230, 274, 764, 994, 1594, 2021, 2063, 2120
NspI	RCATGY	4 cut(s)	238, 664, 1196, 1984
PaqCI	CACCTGC	1 cut(s)	469
PasI	CCCWGGG	1 cut(s)	1923
PceI	AGGCCT	1 cut(s)	22
PciI	ACATGT	1 cut(s)	1980
PctI	GAATGC	2 cut(s)	293, 2306
PdmI	GAANNNNTTC	2 cut(s)	889, 910
PflFI	GACNNNGTC	1 cut(s)	928
PkrI	GCNGC	9 cut(s)	219, 293, 959, 1074, 1198, 1570, 1752, 1759, 2306
Ple19I	CGATCG	1 cut(s)	1634
PleI	GAGTC	5 cut(s)	87, 145, 2128, 2212, 2282
PpsI	GAGTC	5 cut(s)	87, 145, 2128, 2212, 2282
Ppu21I	YACGTR	2 cut(s)	177, 1766
PpuMI	RGGWCCY	1 cut(s)	1909
PscI	ACATGT	1 cut(s)	1980
Psp5II	RGGWCCY	1 cut(s)	1909
Psp6I	CCWGG	4 cut(s)	197, 684, 783, 1922
PspEI	GGTNACC	1 cut(s)	764
PspFI	CCCAGC	1 cut(s)	421
PspGI	CCWGG	4 cut(s)	197, 684, 783, 1922
PspN4I	GGNNCC	6 cut(s)	203, 329, 1054, 1526, 1725, 1864
PspPI	GGNCC	5 cut(s)	202, 726, 1011, 1909, 2402
PspPPI	RGGWCCY	1 cut(s)	1909
PstNI	CAGNNNCTG	1 cut(s)	2242
PsuI	RGATCY	4 cut(s)	406, 428, 847, 1484
PsyI	GACNNNGTC	1 cut(s)	928
PvuI	CGATCG	1 cut(s)	1634
PvuII	CAGCTG	1 cut(s)	1717
RsaI	GTAC	5 cut(s)	5, 144, 983, 1226, 1985
RsaNI	GTAC	5 cut(s)	4, 143, 982, 1225, 1984
RseI	CAYNNNNRTG	2 cut(s)	771, 1134
SaqAI	TTAA	5 cut(s)	509, 731, 759, 1229, 1253
SatI	GCNGC	9 cut(s)	218, 292, 958, 1073, 1197, 1569, 1751, 1758, 2305
Sau96I	GGNCC	5 cut(s)	202, 726, 1011, 1909, 2402
SchI	GAGTC	5 cut(s)	88, 146, 2128, 2212, 2283
ScrFI	CCNGG	5 cut(s)	199, 466, 686, 785, 1924
SduI	GDGCHC	5 cut(s)	1390, 1771, 1888, 1930, 2236
SfaNI	GCATC	5 cut(s)	597, 1219, 1787, 2035, 2545
SfcI	CTRYAG	1 cut(s)	2193
SinI	GGWCC	5 cut(s)	202, 726, 1011, 1909, 2402
SmiMI	CAYNNNNRTG	2 cut(s)	771, 1134
SmlI	CTYRAG	3 cut(s)	1490, 1574, 2333
SmoI	CTYRAG	3 cut(s)	1490, 1574, 2333
SpeI	ACTAGT	1 cut(s)	1505
SseBI	AGGCCT	1 cut(s)	22
SsiI	CCGC	9 cut(s)	186, 301, 1383, 1482, 1804, 1840, 2140, 2144, 2558
SspMI	CTAG	7 cut(s)	228, 1395, 1449, 1506, 2126, 2222, 2393
StuI	AGGCCT	1 cut(s)	22
StyD4I	CCNGG	5 cut(s)	197, 464, 684, 783, 1922
StyI	CCWWGG	2 cut(s)	838, 1296
TaaI	ACNGT	7 cut(s)	608, 764, 1000, 1315, 1600, 2170, 2431
TaiI	ACGT	3 cut(s)	179, 1690, 1768
TaqI	TCGA	4 cut(s)	95, 398, 1830, 2584
TaqII	GACCGA	1 cut(s)	999
TatI	WGTACW	3 cut(s)	142, 1224, 1983
Tru1I	TTAA	5 cut(s)	509, 731, 759, 1229, 1253
Tru9I	TTAA	5 cut(s)	509, 731, 759, 1229, 1253
TscAI	CASTG	6 cut(s)	613, 951, 1159, 1227, 1941, 2331
TseFI	GTSAC	9 cut(s)	151, 230, 274, 764, 994, 1594, 2021, 2063, 2120
TseI	GCWGC	9 cut(s)	217, 291, 957, 1072, 1196, 1568, 1750, 1757, 2304
Tsp45I	GTSAC	9 cut(s)	151, 230, 274, 764, 994, 1594, 2021, 2063, 2120
TspDTI	ATGAA	8 cut(s)	828, 1691, 1782, 2162, 2193, 2301, 2550, 2553
TspGWI	ACGGA	2 cut(s)	194, 2001
TspRI	CASTG	6 cut(s)	613, 951, 1159, 1227, 1941, 2331
Tth111I	GACNNNGTC	1 cut(s)	928
VneI	GTGCAC	3 cut(s)	1386, 1767, 2232
VpaK11BI	GGWCC	5 cut(s)	202, 726, 1011, 1909, 2402
XapI	RAATTY	4 cut(s)	258, 1669, 2318, 2488
XceI	RCATGY	4 cut(s)	238, 664, 1196, 1984
XcmI	CCANNNNNNNNNTGG	2 cut(s)	246, 2260
XmiI	GTMKAC	3 cut(s)	105, 1266, 2498
XmnI	GAANNNNTTC	2 cut(s)	889, 910
XspI	CTAG	7 cut(s)	228, 1395, 1449, 1506, 2126, 2222, 2393

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.