Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0004705

Physical Location & Seq

Genomic Coordinates Forward (+)

232562 .. 243985

Gene Structure 11424 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G003400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2652 bp

ATGGCAGCTTTCGACCATATCAAGGACTTGTACGATGTTGCTCTAAAGCCTCGTCTGTTGCACACTCTCATTAGAGACCATGTCCCCGACACTAAGCACCCTTTTGGGAGCCCATTCGAGCTGTCCAAGGTAGTGTACATGATCAATACTCACAACCTCCTTCGCGAGTCTGTACAAGATTTGACTGATCAAAAGCTAATCAATAATTGGAGGTCCGCCATTGATTCCTGGGTCAACCACTTGATGGAGCTCATCGCCAGTGACATTCCAGATAAATGTTGGGCGGGAATTTGTTTGCTGGGGGTGACTTGTCAGGAATGCAGCTACGAGCGTTTCTTGGAATCATACTCTGGTTGGTTCCAGAAGCTTCTATCACATATTCAGTCTGCCGAAACTTATCAATTTGTGAAGGTGGCCTCTTGCTCCTCAATGGCAGATCTCATCACAAGGTTGGGTGGATCTCCAAATGCAAAAAGGGATGGAACTACCCATGCTGGGAAGCTTGTTCAACAAGTCATTCAACCAGTTTTGAAATTATTAGATGATGATCATTCAGAAGTTGTTTGGGAAGGAGCAGCTCAATTGTTGTGCACAATTATGTCTTTGTTTCCATTTAGCATCAATCGCCATTATGACACTGCTGAAGATGTTCTTGCTTCAAAAATTTTGTCAGGAAAATGCAGTGTTAATATACTGAAGAAACTTGCTCATTGTCTGGCATTACTACCAAAGTCAAGAGGAGATGAGGATAGCTGGTCCTTAATGATTCAGAAGATCTTATTCTTGATTAATGGTCACCTGAATGATGTTTTTCAGGGTTTTGAGGAAGAAACCAAACGCCATGAAATTATTAGATTTTTGGTTCCCCCAGGAAAAGATACACCTCCTCCCTTAGGAGGGAATAAAATGTCAGGAGAAGCCTCAACGAAGGCAAGAAAGAGTTCTGAGCGTTTGCCAATGCCCAGTGTCTCTGCATTGATGGTTTGCTGCTCTACAATGCTAACAACTTCATACCCTGTTCAGGTGACTGTTCCCATTCGGTCCTTTTTAGCCCTTATTGAGAGAGTGCTGATCGTGGATGGCTCCTTGCCACACTCCTTGCTGGCCTTTATGACTGCCATGCAGCAAGAATTCATTTGTTCAGAACTTCCACTTTTGCATTCGTATAGTTTGGAACTCCTCACTGCGATCATAGAGGGTGTGCGCAGTCAACTTTTACCACATGCTGCATATTTAGTGCGTCTGCTTTCATTGTATTTAAAGAGATGTGCATTGCCAGAATTGAGAATAAAGGTCTACTCAATCACCAGGATTTTGCTGATATCCATGGGCGTTGGTATGGCAGTATGCCTTGCTCAAGAAGTTGTTAACAGCGCATTTATTGATCTAAATCCCATTGCCAATGAGAGTGGTGGTGCATCTTCTAGTGGAAACTCAAAGCCTTCTACTGAAGCATTGGTTCAAACACCACAACATAGCCATAGAAAGAGGAAGCATGGAGCTTCGAGCGGATCTCTTGAGTGGCATAACACTAGTAGATTGGAAGGGGGAACCCCCAAGAACCATACAACATCTCCAATTGCTGTTAAAATCGCTGCACTCAGGGCGTTAGAAGCTCTTCTCACTGTGGGTGGTGCATTGAAATCTGAAGGATGGCGATCAGATGTTGATCTTCTTCTGATAAACATAGCTACTAATTCTCTGAAAGGGGCATGGGGTGGTGAGAACGGAAACATTTACCAACTCAATGAACCTGGTGATATTGGGGGTGGTATGCAGCTTGCAGCACTACGTGCACTTTTGGCATCTTTCCTTTCTTCATCTTGTGTCCGCCCCACTTATTTAGCTGAGGGTCTTGATCTTTTCCGTAGAGGCAAACAAGAAACTGGAACCAAACTTGCTGAATTTTGTGCTCATGCTCTTTTGGCCTTAGAGGTGCTTATACATCCCAGGGCCCTCCCACTGGCAGATTTCACCGACGCAACTCTCCTGTCTGATAGAGTTCACTACAAACTCCCAGAAAATATGTACTCTGGTAGTCTAAGACCCCGAACCCCATTTTCAGGTGACATACAGGGAATGATGCATGACGCTGCTGACTCTGATCATGATGACCTATATGATAGCTGGCTTGCAAGTAGTAAAGAAATGGAAGCACCAGTGAGTGACCTAGGAAAGACTATGCAGGCTGGAGAGCCATCAAAAACTGTAACAGTTATTCAGGATAAAACGCTTTCTGTAGATGGGTCATTTAGTAAAGAGACTCTAGCAGGAAGCGTACAGGAGCTCGCAGCAACCATGGAGGATGTGGAGATGAGAGGCAATAGGGATGAAAGTATGGTTGAATCCCACAAATTGAAAGAATCCATAGTGCAATTTCAGGATATCGTGTCTCCAAAGGTTGTCTCAGTTGTTGGAACTACTACTATTACTGAAGAAGTGTTTGGGAGGGTTGATATGGAAAGTGGTCCATCAGATCAAAGAGGTAGCAATACGGTCAATGTTCTGGTGGCTAAGGGTGATGAGTCTCTTGGCGGAGGCAATTTCGCTACCACTCCAAAGCCTGAGAAGAGCAAGGGAGTTGCATTTGAAACGGGTAATGATTCAGATGAGGATTCATTTCCCGATATTGTGGATCCAGAATCTGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RIX1

Protein Analysis

884

Amino Acids

96.54

Weight (kDa)

5.61

Isoelectric Point (pI)

41.35

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004705)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30240 AT1G30240
fragaria_vesca	FvH4_5g22640 FvH4_5g22640 FvH4_5g22640 FvH4_5g22640 FvH4_5g22640 FvH4_5g22640 FvH4_5g22640
malus_domestica	MD09G1289100.v1.1 MD09G1289200.v1.1 MD09G1292100.v1.1 MD17G1284000.v1.1
prunus_persica	Prupe.3G003400_v2.0.a1 Prupe.6G159300_v2.0.a1
pyrus_communis	pycom09g19730 pycom17g27990
rosa_chinensis	RchiOBHm_Chr7g0211051
rosa_laevigata	RLG00000003025
rosa_multiflora	Rmu_sc0012670.1_g000007
rosa_roxburghii	Rroxscaffold_3G00248140
rosa_rugosa	Rorug07G0124000
rosa_samantha	Rh7AG255800 Rh7AG256000 Rh7AG256600 Rh7BG250200 Rh7CG272200 Rh7CG272400 Rh7CG273100 Rh7DG263000
rosa_wichuraiana	Rw7G021880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1205
AccB7I	CCANNNNNTGG	1 cut(s)	244
AccBSI	CCGCTC	1 cut(s)	1509
AccI	GTMKAC	1 cut(s)	1296
AccII	CGCG	1 cut(s)	165
AciI	CCGC	5 cut(s)	216, 284, 1509, 1831, 2535
AclWI	GGATC	4 cut(s)	466, 1519, 2630, 2643
AcsI	RAATTY	4 cut(s)	288, 663, 1130, 1904
AcuI	CTGAAG	5 cut(s)	663, 716, 1470, 1668, 2454
AdeI	CACNNNGTG	1 cut(s)	1793
AfaI	GTAC	5 cut(s)	32, 137, 174, 2030, 2280
AfiI	CCNNNNNNNGG	9 cut(s)	22, 244, 495, 893, 896, 897, 1021, 1963, 2063
AgsI	TTSAA	9 cut(s)	509, 521, 532, 660, 1463, 1642, 2345, 2359, 2591
AhlI	ACTAGT	1 cut(s)	1532
AjnI	CCWGG	5 cut(s)	227, 868, 1307, 1753, 1949
AjuI	GAANNNNNNNTTGG	2 cut(s)	2427, 2459
Alw21I	GWGCWC	5 cut(s)	252, 593, 1798, 1915, 2289
Alw26I	GTCTC	6 cut(s)	69, 973, 2255, 2397, 2410, 2532
Alw44I	GTGCAC	2 cut(s)	589, 1794
AlwI	GGATC	4 cut(s)	466, 1519, 2630, 2643
AlwNI	CAGNNNCTG	1 cut(s)	2645
AoxI	GGCC	4 cut(s)	414, 1104, 1926, 1953
ApaI	GGGCCC	1 cut(s)	1957
ApaLI	GTGCAC	2 cut(s)	589, 1794
ApoI	RAATTY	4 cut(s)	288, 663, 1130, 1904
ArsI	GACNNNNNNTTYG	2 cut(s)	653, 685
AseI	ATTAAT	1 cut(s)	789
Asp700I	GAANNNNTTC	3 cut(s)	648, 940, 1617
AspA2I	CCTAGG	1 cut(s)	2170
AspLEI	GCGC	2 cut(s)	1206, 1376
AspS9I	GGNCC	6 cut(s)	213, 756, 1041, 1953, 1954, 2468
AsuHPI	GGTGA	9 cut(s)	316, 788, 1036, 1297, 1733, 1769, 1966, 2078, 2531
AvaII	GGWCC	4 cut(s)	213, 756, 1041, 2468
AvrII	CCTAGG	1 cut(s)	2170
AxyI	CCTNAGG	1 cut(s)	892
BaeGI	GKGCMC	3 cut(s)	593, 1798, 1957
BamHI	GGATCC	1 cut(s)	2635
BanII	GRGCYC	4 cut(s)	113, 252, 1957, 2289
Bbv12I	GWGCWC	5 cut(s)	252, 593, 1798, 1915, 2289
BbvCI	CCTCAGC	1 cut(s)	1848
BccI	CCATC	8 cut(s)	238, 473, 973, 1073, 1647, 2206, 2237, 2479
BciT130I	CCWGG	5 cut(s)	229, 870, 1309, 1755, 1951
BclI	TGATCA	4 cut(s)	141, 187, 547, 2104
BcoDI	GTCTC	6 cut(s)	69, 973, 2255, 2397, 2410, 2532
BcuI	ACTAGT	1 cut(s)	1532
BfaI	CTAG	4 cut(s)	1425, 1533, 2171, 2267
BfmI	CTRYAG	1 cut(s)	2238
BglII	AGATCT	2 cut(s)	436, 774
BlnI	CCTAGG	1 cut(s)	2170
Bme1390I	CCNGG	5 cut(s)	229, 870, 1309, 1755, 1951
Bme18I	GGWCC	4 cut(s)	213, 756, 1041, 2468
BmgT120I	GGNCC	6 cut(s)	213, 756, 1041, 1953, 1954, 2468
BmiI	GGNNCC	8 cut(s)	110, 359, 864, 1084, 1552, 1891, 1955, 2637
BmrFI	CCNGG	5 cut(s)	229, 870, 1309, 1755, 1951
BmrI	ACTGGG	1 cut(s)	957
BmsI	GCATC	4 cut(s)	627, 1427, 1814, 2073
BmuI	ACTGGG	1 cut(s)	957
BplI	GAGNNNNNCTC	2 cut(s)	1498, 1530
BpmI	CTGGAG	1 cut(s)	2211
Bpu10I	CCTNAGC	2 cut(s)	1848, 2514
BpuEI	CTTGAG	2 cut(s)	1341, 1538
BsaAI	YACGTR	1 cut(s)	1793
BsaBI	GATNNNNATC	4 cut(s)	546, 1389, 1657, 1668
BsaI	GGTCTC	1 cut(s)	69
BsaJI	CCNNGG	8 cut(s)	126, 228, 868, 1326, 1949, 1950, 2170, 2298
BsaXI	ACNNNNNCTCC	4 cut(s)	871, 901, 1558, 1588
Bsc4I	CCNNNNNNNGG	9 cut(s)	22, 244, 495, 893, 896, 897, 1021, 1963, 2063
Bse1I	ACTGG	6 cut(s)	258, 524, 963, 1891, 1968, 2159
Bse21I	CCTNAGG	1 cut(s)	892
Bse3DI	GCAATG	2 cut(s)	1271, 1395
Bse8I	GATNNNNATC	4 cut(s)	546, 1389, 1657, 1668
BseBI	CCWGG	5 cut(s)	229, 870, 1309, 1755, 1951
BseDI	CCNNGG	8 cut(s)	126, 228, 868, 1326, 1949, 1950, 2170, 2298
BseGI	GGATG	6 cut(s)	484, 1084, 1658, 1945, 2311, 2335
BseJI	GATNNNNATC	4 cut(s)	546, 1389, 1657, 1668
BseLI	CCNNNNNNNGG	9 cut(s)	22, 244, 495, 893, 896, 897, 1021, 1963, 2063
BseMI	GCAATG	2 cut(s)	1271, 1395
BseMII	CTCAG	5 cut(s)	936, 1615, 1839, 2421, 2556
BseNI	ACTGG	6 cut(s)	258, 524, 963, 1891, 1968, 2159
BseRI	GAGGAG	4 cut(s)	415, 753, 876, 1169
BseSI	GKGCMC	3 cut(s)	593, 1798, 1957
BseYI	CCCAGC	2 cut(s)	298, 494
BsgI	GTGCAG	1 cut(s)	1581
Bsh1236I	CGCG	1 cut(s)	165
BshFI	GGCC	4 cut(s)	416, 1106, 1928, 1955
BsiHKAI	GWGCWC	5 cut(s)	252, 593, 1798, 1915, 2289
BslFI	GGGAC	1 cut(s)	68
BslI	CCNNNNNNNGG	9 cut(s)	22, 244, 495, 893, 896, 897, 1021, 1963, 2063
BsmAI	GTCTC	6 cut(s)	69, 973, 2255, 2397, 2410, 2532
BsmFI	GGGAC	1 cut(s)	68
BsmI	GAATGC	2 cut(s)	323, 1159
BsnI	GGCC	4 cut(s)	416, 1106, 1928, 1955
Bso31I	GGTCTC	1 cut(s)	69
Bsp120I	GGGCCC	1 cut(s)	1953
Bsp1286I	GDGCHC	7 cut(s)	113, 252, 593, 1798, 1915, 1957, 2289
Bsp1407I	TGTACA	2 cut(s)	135, 172
Bsp19I	CCATGG	2 cut(s)	1326, 2298
Bsp68I	TCGCGA	1 cut(s)	165
BspACI	CCGC	5 cut(s)	216, 284, 1509, 1831, 2535
BspANI	GGCC	4 cut(s)	416, 1106, 1928, 1955
BspCNI	CTCAG	5 cut(s)	937, 1614, 1840, 2420, 2557
BspFNI	CGCG	1 cut(s)	165
BspHI	TCATGA	1 cut(s)	2107
BspLI	GGNNCC	8 cut(s)	110, 359, 864, 1084, 1552, 1891, 1955, 2637
BspPI	GGATC	4 cut(s)	466, 1519, 2630, 2643
BspQI	GCTCTTC	2 cut(s)	1623, 2564
BspTNI	GGTCTC	1 cut(s)	69
BsrBI	CCGCTC	1 cut(s)	1509
BsrDI	GCAATG	2 cut(s)	1271, 1395
BsrGI	TGTACA	2 cut(s)	135, 172
BsrI	ACTGG	6 cut(s)	258, 524, 963, 1891, 1968, 2159
BssECI	CCNNGG	8 cut(s)	126, 228, 868, 1326, 1949, 1950, 2170, 2298
BssT1I	CCWWGG	4 cut(s)	126, 1326, 2170, 2298
Bst2UI	CCWGG	5 cut(s)	229, 870, 1309, 1755, 1951
Bst4CI	ACNGT	5 cut(s)	1030, 1627, 2209, 2215, 2497
Bst6I	CTCTTC	2 cut(s)	1623, 2564
BstAPI	GCANNNNNTGC	1 cut(s)	1793
BstAUI	TGTACA	2 cut(s)	135, 172
BstBAI	YACGTR	1 cut(s)	1793
BstC8I	GCNNGC	6 cut(s)	1104, 1782, 2129, 2133, 2187, 2289
BstDSI	CCRYGG	2 cut(s)	1326, 2298
BstEII	GGTNACC	1 cut(s)	794
BstENI	CCTNNNNNAGG	1 cut(s)	891
BstF5I	GGATG	6 cut(s)	484, 1084, 1658, 1945, 2311, 2335
BstFNI	CGCG	1 cut(s)	165
BstHHI	GCGC	2 cut(s)	1206, 1376
BstMAI	GTCTC	6 cut(s)	69, 973, 2255, 2397, 2410, 2532
BstMWI	GCNNNNNNNGC	6 cut(s)	624, 1604, 1613, 1793, 1802, 1925
BstNI	CCWGG	5 cut(s)	229, 870, 1309, 1755, 1951
BstNSI	RCATGY	1 cut(s)	1226
BstPI	GGTNACC	1 cut(s)	794
BstSCI	CCNGG	5 cut(s)	227, 868, 1307, 1753, 1949
BstSFI	CTRYAG	1 cut(s)	2238
BstSLI	GKGCMC	3 cut(s)	593, 1798, 1957
BstUI	CGCG	1 cut(s)	165
BstX2I	RGATCY	5 cut(s)	436, 458, 774, 1511, 2635
BstYI	RGATCY	5 cut(s)	436, 458, 774, 1511, 2635
Bsu36I	CCTNAGG	1 cut(s)	892
BsuRI	GGCC	4 cut(s)	416, 1106, 1928, 1955
BtgI	CCRYGG	2 cut(s)	1326, 2298
BtgZI	GCGATG	1 cut(s)	238
BtsCI	GGATG	6 cut(s)	484, 1084, 1658, 1945, 2311, 2335
BtsI	GCAGTG	3 cut(s)	636, 688, 1182
BtsIMutI	CAGTG	8 cut(s)	265, 636, 688, 970, 1182, 1623, 1961, 2166
BtuMI	TCGCGA	1 cut(s)	165
Cac8I	GCNNGC	6 cut(s)	1104, 1782, 2129, 2133, 2187, 2289
CaiI	CAGNNNCTG	1 cut(s)	2645
CciI	TCATGA	1 cut(s)	2107
CfoI	GCGC	2 cut(s)	1206, 1376
Cfr13I	GGNCC	6 cut(s)	213, 756, 1041, 1953, 1954, 2468
CseI	GACGC	3 cut(s)	1229, 1988, 2099
CsiI	ACCWGGT	1 cut(s)	1753
Csp6I	GTAC	5 cut(s)	31, 136, 173, 2029, 2279
CspCI	CAANNNNNGTGG	4 cut(s)	1080, 1115, 1390, 1425
CviQI	GTAC	5 cut(s)	31, 136, 173, 2029, 2279
DraI	TTTAAA	1 cut(s)	1260
DraIII	CACNNNGTG	1 cut(s)	1793
Eam1104I	CTCTTC	2 cut(s)	1623, 2564
EarI	CTCTTC	2 cut(s)	1623, 2564
EciI	GGCGGA	3 cut(s)	205, 1820, 2550
Ecl136II	GAGCTC	2 cut(s)	250, 2287
Eco130I	CCWWGG	4 cut(s)	126, 1326, 2170, 2298
Eco24I	GRGCYC	4 cut(s)	113, 252, 1957, 2289
Eco31I	GGTCTC	1 cut(s)	69
Eco32I	GATATC	2 cut(s)	1323, 2386
Eco47I	GGWCC	4 cut(s)	213, 756, 1041, 2468
Eco53kI	GAGCTC	2 cut(s)	250, 2287
Eco57I	CTGAAG	5 cut(s)	663, 716, 1470, 1668, 2454
Eco81I	CCTNAGG	1 cut(s)	892
Eco91I	GGTNACC	1 cut(s)	794
EcoICRI	GAGCTC	2 cut(s)	250, 2287
EcoNI	CCTNNNNNAGG	1 cut(s)	891
EcoO109I	RGGNCCY	2 cut(s)	1953, 1954
EcoO65I	GGTNACC	1 cut(s)	794
EcoRI	GAATTC	1 cut(s)	1130
EcoRII	CCWGG	5 cut(s)	227, 868, 1307, 1753, 1949
EcoRV	GATATC	2 cut(s)	1323, 2386
EcoT14I	CCWWGG	4 cut(s)	126, 1326, 2170, 2298
EcoT22I	ATGCAT	1 cut(s)	2088
EcoT38I	GRGCYC	4 cut(s)	113, 252, 1957, 2289
ErhI	CCWWGG	4 cut(s)	126, 1326, 2170, 2298
FalI	AAGNNNNNCTT	2 cut(s)	636, 668
FaqI	GGGAC	1 cut(s)	68
FauI	CCCGC	1 cut(s)	277
FbaI	TGATCA	4 cut(s)	141, 187, 547, 2104
FblI	GTMKAC	1 cut(s)	1296
FokI	GGATG	6 cut(s)	491, 1091, 1665, 1932, 2318, 2342
FriOI	GRGCYC	4 cut(s)	113, 252, 1957, 2289
FspBI	CTAG	4 cut(s)	1425, 1533, 2171, 2267
FspI	TGCGCA	1 cut(s)	1205
GlaI	GCGC	2 cut(s)	1205, 1375
GsaI	CCCAGC	2 cut(s)	302, 498
GsuI	CTGGAG	1 cut(s)	2211
HaeIII	GGCC	4 cut(s)	416, 1106, 1928, 1955
HgaI	GACGC	3 cut(s)	1229, 1988, 2099
HhaI	GCGC	2 cut(s)	1206, 1376
Hin6I	GCGC	2 cut(s)	1204, 1374
HinP1I	GCGC	2 cut(s)	1204, 1374
HincII	GTYRAC	3 cut(s)	235, 1211, 1369
HindII	GTYRAC	3 cut(s)	235, 1211, 1369
HindIII	AAGCTT	2 cut(s)	365, 500
HpaI	GTTAAC	1 cut(s)	1369
HphI	GGTGA	9 cut(s)	316, 788, 1036, 1297, 1733, 1769, 1966, 2078, 2531
Hpy166II	GTNNAC	8 cut(s)	136, 235, 591, 1211, 1297, 1369, 1796, 2005
Hpy8I	GTNNAC	8 cut(s)	136, 235, 591, 1211, 1297, 1369, 1796, 2005
Hpy99I	CGWCG	1 cut(s)	1982
HpyAV	CCTTC	7 cut(s)	170, 403, 563, 922, 1452, 1538, 1643
HpyCH4III	ACNGT	5 cut(s)	1030, 1627, 2209, 2215, 2497
HpyCH4IV	ACGT	1 cut(s)	1792
HpyF10VI	GCNNNNNNNGC	6 cut(s)	624, 1604, 1613, 1793, 1802, 1925
HpySE526I	ACGT	1 cut(s)	1792
HspAI	GCGC	2 cut(s)	1204, 1374
Ksp22I	TGATCA	4 cut(s)	141, 187, 547, 2104
KspAI	GTTAAC	1 cut(s)	1369
LguI	GCTCTTC	2 cut(s)	1623, 2564
LmnI	GCTCC	7 cut(s)	108, 247, 428, 572, 1088, 1499, 2284
LweI	GCATC	4 cut(s)	627, 1427, 1814, 2073
MabI	ACCWGGT	1 cut(s)	1753
MaeI	CTAG	4 cut(s)	1425, 1533, 2171, 2267
MaeII	ACGT	1 cut(s)	1792
MaeIII	GTNAC	7 cut(s)	260, 304, 794, 1024, 2066, 2165, 2209
MbiI	CCGCTC	1 cut(s)	1509
MfeI	CAATTG	2 cut(s)	581, 1578
MflI	RGATCY	5 cut(s)	436, 458, 774, 1511, 2635
MhlI	GDGCHC	7 cut(s)	113, 252, 593, 1798, 1915, 1957, 2289
MlyI	GAGTC	4 cut(s)	176, 2093, 2257, 2534
MmeI	TCCRAC	1 cut(s)	2395
Mph1103I	ATGCAT	1 cut(s)	2088
MroXI	GAANNNNTTC	3 cut(s)	648, 940, 1617
MseI	TTAA	6 cut(s)	687, 761, 789, 1259, 1368, 1587
MslI	CAYNNNNRTG	2 cut(s)	596, 801
MspR9I	CCNGG	5 cut(s)	229, 870, 1309, 1755, 1951
MunI	CAATTG	2 cut(s)	581, 1578
Mva1269I	GAATGC	2 cut(s)	323, 1159
MvaI	CCWGG	5 cut(s)	229, 870, 1309, 1755, 1951
MvnI	CGCG	1 cut(s)	165
MwoI	GCNNNNNNNGC	6 cut(s)	624, 1604, 1613, 1793, 1802, 1925
NcoI	CCATGG	2 cut(s)	1326, 2298
NlaIV	GGNNCC	8 cut(s)	110, 359, 864, 1084, 1552, 1891, 1955, 2637
NmuCI	GTSAC	6 cut(s)	260, 304, 794, 1024, 2066, 2165
NruI	TCGCGA	1 cut(s)	165
NsbI	TGCGCA	1 cut(s)	1205
NsiI	ATGCAT	1 cut(s)	2088
NspI	RCATGY	1 cut(s)	1226
PagI	TCATGA	1 cut(s)	2107
PasI	CCCWGGG	1 cut(s)	1950
PciSI	GCTCTTC	2 cut(s)	1623, 2564
PctI	GAATGC	2 cut(s)	323, 1159
PdmI	GAANNNNTTC	3 cut(s)	648, 940, 1617
PfeI	GAWTC	8 cut(s)	224, 341, 766, 2345, 2363, 2603, 2615, 2642
PflFI	GACNNNGTC	1 cut(s)	80
PflMI	CCANNNNNTGG	1 cut(s)	244
PleI	GAGTC	4 cut(s)	175, 2093, 2257, 2533
PpsI	GAGTC	4 cut(s)	175, 2093, 2257, 2533
Ppu21I	YACGTR	1 cut(s)	1793
PshBI	ATTAAT	1 cut(s)	789
Psp124BI	GAGCTC	2 cut(s)	252, 2289
Psp6I	CCWGG	5 cut(s)	227, 868, 1307, 1753, 1949
PspEI	GGTNACC	1 cut(s)	794
PspFI	CCCAGC	2 cut(s)	298, 494
PspGI	CCWGG	5 cut(s)	227, 868, 1307, 1753, 1949
PspN4I	GGNNCC	8 cut(s)	110, 359, 864, 1084, 1552, 1891, 1955, 2637
PspOMI	GGGCCC	1 cut(s)	1953
PspPI	GGNCC	6 cut(s)	213, 756, 1041, 1953, 1954, 2468
PstNI	CAGNNNCTG	1 cut(s)	2645
PsuI	RGATCY	5 cut(s)	436, 458, 774, 1511, 2635
PsyI	GACNNNGTC	1 cut(s)	80
RruI	TCGCGA	1 cut(s)	165
RsaI	GTAC	5 cut(s)	32, 137, 174, 2030, 2280
RsaNI	GTAC	5 cut(s)	31, 136, 173, 2029, 2279
RseI	CAYNNNNRTG	2 cut(s)	596, 801
SacI	GAGCTC	2 cut(s)	252, 2289
SapI	GCTCTTC	2 cut(s)	1623, 2564
SaqAI	TTAA	6 cut(s)	687, 761, 789, 1259, 1368, 1587
Sau96I	GGNCC	6 cut(s)	213, 756, 1041, 1953, 1954, 2468
SchI	GAGTC	4 cut(s)	176, 2093, 2257, 2534
ScrFI	CCNGG	5 cut(s)	229, 870, 1309, 1755, 1951
SduI	GDGCHC	7 cut(s)	113, 252, 593, 1798, 1915, 1957, 2289
SexAI	ACCWGGT	1 cut(s)	1753
SfaNI	GCATC	4 cut(s)	627, 1427, 1814, 2073
SfcI	CTRYAG	1 cut(s)	2238
SinI	GGWCC	4 cut(s)	213, 756, 1041, 2468
SmiMI	CAYNNNNRTG	2 cut(s)	596, 801
SmlI	CTYRAG	2 cut(s)	1356, 1517
SmoI	CTYRAG	2 cut(s)	1356, 1517
SpeI	ACTAGT	1 cut(s)	1532
SsiI	CCGC	5 cut(s)	216, 284, 1509, 1831, 2535
SspMI	CTAG	4 cut(s)	1425, 1533, 2171, 2267
SstI	GAGCTC	2 cut(s)	252, 2289
StyD4I	CCNGG	5 cut(s)	227, 868, 1307, 1753, 1949
StyI	CCWWGG	4 cut(s)	126, 1326, 2170, 2298
TaaI	ACNGT	5 cut(s)	1030, 1627, 2209, 2215, 2497
TaiI	ACGT	1 cut(s)	1795
TaqI	TCGA	3 cut(s)	12, 117, 1505
TaqII	GACCGA	1 cut(s)	1029
TatI	WGTACW	3 cut(s)	135, 172, 2028
TfiI	GAWTC	8 cut(s)	224, 341, 766, 2345, 2363, 2603, 2615, 2642
Tru1I	TTAA	6 cut(s)	687, 761, 789, 1259, 1368, 1587
Tru9I	TTAA	6 cut(s)	687, 761, 789, 1259, 1368, 1587
TscAI	CASTG	8 cut(s)	265, 643, 688, 970, 1189, 1630, 1968, 2166
TseFI	GTSAC	6 cut(s)	260, 304, 794, 1024, 2066, 2165
Tsp45I	GTSAC	6 cut(s)	260, 304, 794, 1024, 2066, 2165
TspDTI	ATGAA	8 cut(s)	858, 999, 1123, 1239, 1764, 1809, 2346, 2607
TspGWI	ACGGA	2 cut(s)	1743, 1856
TspRI	CASTG	8 cut(s)	265, 643, 688, 970, 1189, 1630, 1968, 2166
Tth111I	GACNNNGTC	1 cut(s)	80
Van91I	CCANNNNNTGG	1 cut(s)	244
VneI	GTGCAC	2 cut(s)	589, 1794
VpaK11BI	GGWCC	4 cut(s)	213, 756, 1041, 2468
VspI	ATTAAT	1 cut(s)	789
XagI	CCTNNNNNAGG	1 cut(s)	891
XapI	RAATTY	4 cut(s)	288, 663, 1130, 1904
XceI	RCATGY	1 cut(s)	1226
XcmI	CCANNNNNNNNNTGG	2 cut(s)	276, 2305
XmaJI	CCTAGG	1 cut(s)	2170
XmiI	GTMKAC	1 cut(s)	1296
XmnI	GAANNNNTTC	3 cut(s)	648, 940, 1617
XspI	CTAG	4 cut(s)	1425, 1533, 2171, 2267
Zsp2I	ATGCAT	1 cut(s)	2088

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.