Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0004705

Physical Location & Seq

Genomic Coordinates Reverse (-)

13996621 .. 14007388

Gene Structure 10768 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g22640.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2499 bp

ATGGCTCCGACGGCGTCGGCCTTCGACCATGTGAAGGACATGCACGACTCCTCTCTCAAGCCTCGCTTGCTTCAGTCTCTCATCAGAGACCATCTCCCCGACGATAACCTCCCCTCCCGGTCCTCACTCGACCTCTCCAACCTCGTCTACTTGCTCAAAACCCACAGCCTCCTCTCCGAGTCCGTCCCCGATCCGACGGACCACAAGCTCATCGCTCCCTGGAGATCCGCCGTTGATTCCTGGCTCGACCGCTTGTTCCTCCTCCTTTCCAGCGACATGCCAGATAAATGCTGGGGAGGAATTTGTTTGCTAGGGGTGACTTGTCAGGAATGCAGCTCTGATCGTTTCTTGGCATCATATTCTGTTTGGTACCAGAAGCTTCTCTCACCTCTTCAGTCTCCATCAACATCTCAATTCATGAAGGTGGCCTCTTGTGCTTCAATGTCAGATCTCTTTACAAGATTGGGCGGATTTCCAATTGTTAAGAAAGATGGAACTGCCCATGCTGGGAAACTCATTCCATCAGTTTTGAAGTTGTTGGATGATGATCACTCGGAGGTTGTTTGGGAAGAAGTGCTTCGATTGCTTTGCATATTCATATCTTTCTTTCCTGTGTCCGTCAGTCGTCATTATGACAGTGTTGAAGATGCTATTGCTTCAAAAATTCTGTCCGGAAAATGTAGTTTCAATATGCTGAAGAAACTAGCTCACTGCCTGGCAGTACTACCAAAATCGAAAGGGGATGAAGAAAGCTGGTCATTAATGATTCAGAAGGTTTTATTGTCTATTAATCGTCATCTGAATGATGTTTTCCAGGGTTTTGAGGAAGAAACGAAACGTCGTGAAGGTATTAGACTTTTGGTCCTACCTGAAAAAGATCCCCCTTCCCCTTTAGGGGGAAATACATTAACGGGAGAAGCCTCAGAGGAGGCAAGAAAGAGGTCTCATAGTTCACTAGTCTCCAGTGTATCTGCTCTCATAATATGCTGCTCTACAATGCTAACCAGTTCATACCCTGTCCAGGTGCCTGCTCCTGTTCACTCCTTATTAGCTCTTATTGAGAGAGTGATGGATGTGGACGGCTCCTTGTCACACTCGCTGCGGCTCTTTATGACTGCCATGCAACAAGAGTTCGTTTGTTCGGAACTTCCACGTTTGCATTCGTATAGTTTGGACCTCCTCACTGCAATCTTTAAGGGTGTGCGGAGTCAAATTTTACCGCATGATGCACATATAGTGCGTTTGCTTTCAGTGTACTTAAAGAGATGTGTCTTGCCAGAACTGAGAGTTAAGGTCTACTCAATCACAAGAATTTTGCTGATATCCACCGGTGTTGGAGTGGCAGTAAGCCTTGCTCAGGAAGTTGTGAACAGTACTTCGGTTGATTTAAATCCCATTGTTATGGAGAGTAGTGCCAGCGTGAAACCCTCCGAAGCATTGCTCCAAACACCACAATCTAGCAATAGAAAGAGGAAGCATGGAACTTTGACATCTCTCGAGATGCATAACTCAAGTAATTTGGAGGTGGGAACCACCAAGAACCATACAAGATGTTCAATGGCTGTGCAAGTAGCGGCACTTGAGGCATTAGAAGCTCTTCTGACTGTGGATGGTGTATTTAAATCTGAAGGATGGCGATCAAATGTTGATCTTCTTCTGATAAACATAGCTACAAATTCTCTAAAAGGGGGACTTGCTGGTGAGAACGCAAGCATTTATCAGCCAAATGAACCTACTGATGTTTGTAGTGATATACAGCTTGCAGCACTACGTGCACTTTTGGCATCTTTCTTGTCTTCATCTCGTGTTCGGCCCCTATATTTAGCTCAGGGTGTTGATCTTTTCCGTAGAGGCAAGCTTGAAAGTGGTACCAAACTTGCTGAATTTTGTGCTCATGCTCTCTTAGTCTTAGAGGTGCTTATACATCCCAGGGCCCTCCCACTGGCAGATTTCTCAAACTCGACCAGCAATGATGAAAGAGCTCACCACGACTACCAAGGAAATTTCTACTCTGGTAATCTAAAGCACGGAACCTCATATTCAACTAACATTCATGGAACGGCAGATATTGCTCCTGATTTATATCGTGACGAGCTGTACTCGAGCTGGATTGAAACCAGTAAAAAAGTGGAAGCACCAGGGAACAACCTAGGCAAGACTATGCAGACCGGAGAACCATCCAAAATTCCCGCAGTTCAAGGCAATCAAATTCTTTCCGCAGATGCTTCATTAGGCAAAGAAAATGTAGCCAGAAGGGAACAGGAGATTGTAGCAGCAAACATCGAGGATGTGGAGATTAGAGAAAATGGAGATGAAACTTTTGAACTTCATGAACAAATTTTTGGTAGGGCAATGGAAAATGATCCATCGTATCCAGCAGATACCAATATCTCAGTTGCTGAGAACAGCAAGGGATTTGGAATTGGGATGATTATTGATTCGGATACAGACTCAATTCCTGATATTGTGGACATCGGTCCGGATTCTGATTCTGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RIX1

Protein Analysis

833

Amino Acids

91.28

Weight (kDa)

5.56

Isoelectric Point (pI)

43.35

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004705)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30240 AT1G30240
fragaria_vesca	FvH4_5g22640 FvH4_5g22640 FvH4_5g22640 FvH4_5g22640 FvH4_5g22640 FvH4_5g22640 FvH4_5g22640
malus_domestica	MD09G1289100.v1.1 MD09G1289200.v1.1 MD09G1292100.v1.1 MD17G1284000.v1.1
prunus_persica	Prupe.3G003400_v2.0.a1 Prupe.6G159300_v2.0.a1
pyrus_communis	pycom09g19730 pycom17g27990
rosa_chinensis	RchiOBHm_Chr7g0211051
rosa_laevigata	RLG00000003025
rosa_multiflora	Rmu_sc0012670.1_g000007
rosa_roxburghii	Rroxscaffold_3G00248140
rosa_rugosa	Rorug07G0124000
rosa_samantha	Rh7AG255800 Rh7AG256000 Rh7AG256600 Rh7BG250200 Rh7CG272200 Rh7CG272400 Rh7CG273100 Rh7DG263000
rosa_wichuraiana	Rw7G021880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	2 cut(s)	369, 1868
AccB1I	GGYRCC	3 cut(s)	369, 1024, 1868
AccI	GTMKAC	2 cut(s)	147, 1296
AccIII	TCCGGA	2 cut(s)	671, 2479
AciI	CCGC	9 cut(s)	228, 250, 468, 1102, 1204, 1220, 1574, 2190, 2217
AclWI	GGATC	4 cut(s)	185, 219, 872, 2357
AcuI	CTGAAG	4 cut(s)	56, 377, 716, 1647
AcyI	GRCGYC	1 cut(s)	14
AdeI	CACNNNGTG	1 cut(s)	1772
AfaI	GTAC	6 cut(s)	371, 723, 1256, 1375, 1870, 2099
AfiI	CCNNNNNNNGG	8 cut(s)	34, 507, 894, 895, 896, 1021, 1357, 1942
AgeI	ACCGGT	1 cut(s)	1328
AhdI	GACNNNNNGTC	1 cut(s)	860
AhlI	ACTAGT	1 cut(s)	955
AjnI	CCWGG	7 cut(s)	218, 239, 714, 813, 1020, 1928, 2137
AjuI	GAANNNNNNNTTGG	2 cut(s)	2325, 2357
Alw21I	GWGCWC	3 cut(s)	1777, 1894, 1984
Alw26I	GTCTC	5 cut(s)	81, 81, 402, 948, 964
Alw44I	GTGCAC	1 cut(s)	1773
AlwI	GGATC	4 cut(s)	185, 219, 872, 2357
AlwNI	CAGNNNCTG	1 cut(s)	2399
Ama87I	CYCGRG	2 cut(s)	1496, 2101
Aor13HI	TCCGGA	2 cut(s)	671, 2479
AoxI	GGCC	4 cut(s)	18, 426, 1811, 1932
ApaI	GGGCCC	1 cut(s)	1936
ApaLI	GTGCAC	1 cut(s)	1773
ApeKI	GCWGC	5 cut(s)	333, 987, 1099, 1763, 2273
ArsI	GACNNNNNNTTYG	2 cut(s)	653, 685
AseI	ATTAAT	2 cut(s)	761, 789
AsiGI	ACCGGT	1 cut(s)	1328
Asp700I	GAANNNNTTC	2 cut(s)	576, 1596
Asp718I	GGTACC	2 cut(s)	369, 1868
AspA2I	CCTAGG	1 cut(s)	2149
AspS9I	GGNCC	8 cut(s)	120, 199, 862, 1174, 1812, 1932, 1933, 2477
AsuC2I	CCSGG	1 cut(s)	118
AsuHPI	GGTGA	4 cut(s)	328, 378, 1712, 1976
AvaI	CYCGRG	2 cut(s)	1496, 2101
AvaII	GGWCC	5 cut(s)	120, 199, 862, 1174, 2477
AvrII	CCTAGG	1 cut(s)	2149
BaeGI	GKGCMC	2 cut(s)	1777, 1936
BanI	GGYRCC	3 cut(s)	369, 1024, 1868
BanII	GRGCYC	2 cut(s)	1936, 1984
BauI	CACGAG	1 cut(s)	1803
BbsI	GAAGAC	1 cut(s)	1788
Bbv12I	GWGCWC	3 cut(s)	1777, 1894, 1984
BbvI	GCAGC	5 cut(s)	345, 974, 1086, 1775, 2285
BccI	CCATC	9 cut(s)	99, 409, 485, 529, 1063, 1604, 1626, 2185, 2374
BceAI	ACGGC	4 cut(s)	27, 215, 1096, 2076
BcgI	CGANNNNNNTGC	2 cut(s)	570, 604
BciT130I	CCWGG	7 cut(s)	220, 241, 716, 815, 1022, 1930, 2139
BciVI	GTATCC	2 cut(s)	2382, 2437
BclI	TGATCA	1 cut(s)	547
BcnI	CCSGG	1 cut(s)	118
BcoDI	GTCTC	5 cut(s)	81, 81, 402, 948, 964
BcuI	ACTAGT	1 cut(s)	955
BfaI	CTAG	5 cut(s)	311, 704, 956, 1458, 2150
BfuI	GTATCC	2 cut(s)	2382, 2437
BglII	AGATCT	1 cut(s)	448
BisI	GCNGC	7 cut(s)	334, 988, 1100, 1103, 1575, 1764, 2274
BlnI	CCTAGG	1 cut(s)	2149
BlsI	GCNGC	7 cut(s)	335, 989, 1101, 1104, 1576, 1765, 2275
BmcAI	AGTACT	2 cut(s)	723, 1375
Bme1390I	CCNGG	8 cut(s)	118, 220, 241, 716, 815, 1022, 1930, 2139
Bme18I	GGWCC	5 cut(s)	120, 199, 862, 1174, 2477
BmeRI	GACNNNNNGTC	1 cut(s)	860
BmeT110I	CYCGRG	2 cut(s)	1496, 2101
BmgT120I	GGNCC	8 cut(s)	120, 199, 862, 1174, 1812, 1932, 1933, 2477
BmiI	GGNNCC	9 cut(s)	6, 371, 1026, 1084, 1531, 1814, 1870, 1934, 2032
BmrFI	CCNGG	8 cut(s)	118, 220, 241, 716, 815, 1022, 1930, 2139
BmsI	GCATC	6 cut(s)	362, 637, 1216, 1491, 1793, 2212
BoxI	GACNNNNGTC	1 cut(s)	2475
BpiI	GAAGAC	1 cut(s)	1788
BplI	GAGNNNNNCTC	4 cut(s)	78, 110, 2084, 2116
BpmI	CTGGAG	2 cut(s)	241, 946
Bpu10I	CCTNAGC	2 cut(s)	1356, 1827
BpuEI	CTTGAG	3 cut(s)	41, 1495, 1601
BpuMI	CCSGG	1 cut(s)	118
BsaAI	YACGTR	1 cut(s)	1772
BsaBI	GATNNNNATC	4 cut(s)	546, 1389, 1636, 2082
BsaHI	GRCGYC	1 cut(s)	14
BsaI	GGTCTC	2 cut(s)	81, 948
BsaJI	CCNNGG	7 cut(s)	218, 814, 1928, 1929, 1996, 2138, 2149
BsaWI	WCCGGW	4 cut(s)	671, 1328, 2168, 2479
BsaXI	ACNNNNNCTCC	4 cut(s)	98, 128, 1329, 1359
Bsc4I	CCNNNNNNNGG	8 cut(s)	34, 507, 894, 895, 896, 1021, 1357, 1942
Bse118I	RCCGGY	1 cut(s)	1328
Bse1I	ACTGG	4 cut(s)	963, 1005, 1947, 2118
Bse3DI	GCAATG	3 cut(s)	1436, 1975, 2358
Bse8I	GATNNNNATC	4 cut(s)	546, 1389, 1636, 2082
BseAI	TCCGGA	2 cut(s)	671, 2479
BseBI	CCWGG	7 cut(s)	220, 241, 716, 815, 1022, 1930, 2139
BseDI	CCNNGG	7 cut(s)	218, 814, 1928, 1929, 1996, 2138, 2149
BseGI	GGATG	9 cut(s)	547, 748, 1078, 1615, 1637, 1924, 2177, 2293, 2433
BseJI	GATNNNNATC	4 cut(s)	546, 1389, 1636, 2082
BseLI	CCNNNNNNNGG	8 cut(s)	34, 507, 894, 895, 896, 1021, 1357, 1942
BseMI	GCAATG	3 cut(s)	1436, 1975, 2358
BseMII	CTCAG	6 cut(s)	936, 1274, 1370, 1841, 2391, 2406
BseNI	ACTGG	4 cut(s)	963, 1005, 1947, 2118
BseRI	GAGGAG	5 cut(s)	40, 161, 251, 941, 1169
BseSI	GKGCMC	2 cut(s)	1777, 1936
BseXI	GCAGC	5 cut(s)	345, 974, 1086, 1775, 2285
BseYI	CCCAGC	2 cut(s)	291, 506
Bsh1285I	CGRYCG	1 cut(s)	250
BshFI	GGCC	4 cut(s)	20, 428, 1813, 1934
BshNI	GGYRCC	3 cut(s)	369, 1024, 1868
BshTI	ACCGGT	1 cut(s)	1328
BsiEI	CGRYCG	1 cut(s)	250
BsiHKAI	GWGCWC	3 cut(s)	1777, 1894, 1984
BsiHKCI	CYCGRG	2 cut(s)	1496, 2101
BsiSI	CCGG	5 cut(s)	118, 672, 1329, 2169, 2480
BslFI	GGGAC	2 cut(s)	170, 1704
BslI	CCNNNNNNNGG	8 cut(s)	34, 507, 894, 895, 896, 1021, 1357, 1942
BsmAI	GTCTC	5 cut(s)	81, 81, 402, 948, 964
BsmFI	GGGAC	2 cut(s)	170, 1704
BsmI	GAATGC	2 cut(s)	335, 1159
BsnI	GGCC	4 cut(s)	20, 428, 1813, 1934
Bso31I	GGTCTC	2 cut(s)	81, 948
BsoBI	CYCGRG	2 cut(s)	1496, 2101
Bsp120I	GGGCCC	1 cut(s)	1932
Bsp1286I	GDGCHC	4 cut(s)	1777, 1894, 1936, 1984
Bsp13I	TCCGGA	2 cut(s)	671, 2479
BspACI	CCGC	9 cut(s)	228, 250, 468, 1102, 1204, 1220, 1574, 2190, 2217
BspANI	GGCC	4 cut(s)	20, 428, 1813, 1934
BspCNI	CTCAG	6 cut(s)	935, 1275, 1369, 1840, 2392, 2405
BspEI	TCCGGA	2 cut(s)	671, 2479
BspHI	TCATGA	2 cut(s)	417, 2329
BspLI	GGNNCC	9 cut(s)	6, 371, 1026, 1084, 1531, 1814, 1870, 1934, 2032
BspPI	GGATC	4 cut(s)	185, 219, 872, 2357
BspQI	GCTCTTC	1 cut(s)	1602
BspT107I	GGYRCC	3 cut(s)	369, 1024, 1868
BspTNI	GGTCTC	2 cut(s)	81, 948
BsrDI	GCAATG	3 cut(s)	1436, 1975, 2358
BsrFI	RCCGGY	1 cut(s)	1328
BsrI	ACTGG	4 cut(s)	963, 1005, 1947, 2118
BssAI	RCCGGY	1 cut(s)	1328
BssECI	CCNNGG	7 cut(s)	218, 814, 1928, 1929, 1996, 2138, 2149
BssNI	GRCGYC	1 cut(s)	14
BssSI	CACGAG	1 cut(s)	1803
BssT1I	CCWWGG	2 cut(s)	1996, 2149
Bst2BI	CACGAG	1 cut(s)	1803
Bst2UI	CCWGG	7 cut(s)	220, 241, 716, 815, 1022, 1930, 2139
Bst4CI	ACNGT	3 cut(s)	638, 1373, 1606
Bst6I	CTCTTC	2 cut(s)	396, 1602
BstACI	GRCGYC	1 cut(s)	14
BstAPI	GCANNNNNTGC	2 cut(s)	1772, 2069
BstBAI	YACGTR	1 cut(s)	1772
BstC8I	GCNNGC	6 cut(s)	68, 1029, 1417, 1711, 1761, 1856
BstDEI	CTNAG	8 cut(s)	922, 1283, 1356, 1827, 1903, 1909, 2392, 2400
BstENI	CCTNNNNNAGG	1 cut(s)	1355
BstF5I	GGATG	9 cut(s)	547, 748, 1078, 1615, 1637, 1924, 2177, 2293, 2433
BstMAI	GTCTC	5 cut(s)	81, 81, 402, 948, 964
BstMCI	CGRYCG	1 cut(s)	250
BstMWI	GCNNNNNNNGC	9 cut(s)	11, 67, 434, 583, 1583, 1592, 1772, 1781, 2069
BstNI	CCWGG	7 cut(s)	220, 241, 716, 815, 1022, 1930, 2139
BstNSI	RCATGY	2 cut(s)	43, 280
BstPAI	GACNNNNGTC	1 cut(s)	2475
BstSCI	CCNGG	8 cut(s)	116, 218, 239, 714, 813, 1020, 1928, 2137
BstSLI	GKGCMC	2 cut(s)	1777, 1936
BstV1I	GCAGC	5 cut(s)	345, 974, 1086, 1775, 2285
BstV2I	GAAGAC	1 cut(s)	1788
BstX2I	RGATCY	3 cut(s)	224, 448, 877
BstXI	CCANNNNNNTGG	1 cut(s)	1402
BstYI	RGATCY	3 cut(s)	224, 448, 877
BsuI	GTATCC	2 cut(s)	2382, 2437
BsuRI	GGCC	4 cut(s)	20, 428, 1813, 1934
BtgZI	GCGATG	1 cut(s)	196
BtsCI	GGATG	9 cut(s)	547, 748, 1078, 1615, 1637, 1924, 2177, 2293, 2433
BtsI	GCAGTG	2 cut(s)	709, 1182
BtsIMutI	CAGTG	6 cut(s)	643, 709, 970, 1182, 1257, 1940
Cac8I	GCNNGC	6 cut(s)	68, 1029, 1417, 1711, 1761, 1856
CaiI	CAGNNNCTG	1 cut(s)	2399
CciI	TCATGA	2 cut(s)	417, 2329
Cfr10I	RCCGGY	1 cut(s)	1328
Cfr13I	GGNCC	8 cut(s)	120, 199, 862, 1174, 1812, 1932, 1933, 2477
CpoI	CGGWCCG	1 cut(s)	2477
CseI	GACGC	1 cut(s)	3
Csp6I	GTAC	6 cut(s)	370, 722, 1255, 1374, 1869, 2098
CspAI	ACCGGT	1 cut(s)	1328
CspCI	CAANNNNNGTGG	2 cut(s)	1315, 1350
CspI	CGGWCCG	1 cut(s)	2477
CviQI	GTAC	6 cut(s)	370, 722, 1255, 1374, 1869, 2098
DdeI	CTNAG	8 cut(s)	922, 1283, 1356, 1827, 1903, 1909, 2392, 2400
DraI	TTTAAA	2 cut(s)	1389, 1621
DraIII	CACNNNGTG	1 cut(s)	1772
DriI	GACNNNNNGTC	1 cut(s)	860
Eam1104I	CTCTTC	2 cut(s)	396, 1602
Eam1105I	GACNNNNNGTC	1 cut(s)	860
EarI	CTCTTC	2 cut(s)	396, 1602
EciI	GGCGGA	2 cut(s)	217, 483
Ecl136II	GAGCTC	1 cut(s)	1982
Eco130I	CCWWGG	2 cut(s)	1996, 2149
Eco24I	GRGCYC	2 cut(s)	1936, 1984
Eco31I	GGTCTC	2 cut(s)	81, 948
Eco32I	GATATC	1 cut(s)	1323
Eco47I	GGWCC	5 cut(s)	120, 199, 862, 1174, 2477
Eco53kI	GAGCTC	1 cut(s)	1982
Eco57I	CTGAAG	4 cut(s)	56, 377, 716, 1647
Eco88I	CYCGRG	2 cut(s)	1496, 2101
EcoICRI	GAGCTC	1 cut(s)	1982
EcoNI	CCTNNNNNAGG	1 cut(s)	1355
EcoO109I	RGGNCCY	2 cut(s)	1932, 1933
EcoRII	CCWGG	7 cut(s)	218, 239, 714, 813, 1020, 1928, 2137
EcoRV	GATATC	1 cut(s)	1323
EcoT14I	CCWWGG	2 cut(s)	1996, 2149
EcoT22I	ATGCAT	1 cut(s)	1506
EcoT38I	GRGCYC	2 cut(s)	1936, 1984
ErhI	CCWWGG	2 cut(s)	1996, 2149
FalI	AAGNNNNNCTT	6 cut(s)	50, 82, 561, 593, 1677, 1709
FaqI	GGGAC	2 cut(s)	170, 1704
FauI	CCCGC	1 cut(s)	2197
FbaI	TGATCA	1 cut(s)	547
FblI	GTMKAC	2 cut(s)	147, 1296
Fnu4HI	GCNGC	7 cut(s)	334, 988, 1100, 1103, 1575, 1764, 2274
FokI	GGATG	9 cut(s)	554, 755, 1085, 1622, 1644, 1911, 2164, 2300, 2440
FriOI	GRGCYC	2 cut(s)	1936, 1984
Fsp4HI	GCNGC	7 cut(s)	334, 988, 1100, 1103, 1575, 1764, 2274
FspBI	CTAG	5 cut(s)	311, 704, 956, 1458, 2150
GluI	GCNGC	7 cut(s)	334, 988, 1100, 1103, 1575, 1764, 2274
GsaI	CCCAGC	2 cut(s)	295, 510
GsuI	CTGGAG	2 cut(s)	241, 946
HaeIII	GGCC	4 cut(s)	20, 428, 1813, 1934
HapII	CCGG	5 cut(s)	118, 672, 1329, 2169, 2480
HgaI	GACGC	1 cut(s)	3
Hin1I	GRCGYC	1 cut(s)	14
HindIII	AAGCTT	2 cut(s)	377, 1856
HinfI	GANTC	9 cut(s)	47, 179, 236, 766, 1207, 2438, 2450, 2483, 2489
HpaII	CCGG	5 cut(s)	118, 672, 1329, 2169, 2480
HphI	GGTGA	4 cut(s)	328, 378, 1712, 1976
Hpy166II	GTNNAC	9 cut(s)	148, 953, 1039, 1078, 1255, 1297, 1369, 1775, 2470
Hpy8I	GTNNAC	9 cut(s)	148, 953, 1039, 1078, 1255, 1297, 1369, 1775, 2470
Hpy99I	CGWCG	5 cut(s)	13, 19, 104, 199, 843
HpyAV	CCTTC	8 cut(s)	28, 31, 415, 766, 839, 894, 1622, 2247
HpyCH4III	ACNGT	3 cut(s)	638, 1373, 1606
HpyCH4IV	ACGT	3 cut(s)	838, 1153, 1771
HpyF10VI	GCNNNNNNNGC	9 cut(s)	11, 67, 434, 583, 1583, 1592, 1772, 1781, 2069
HpyF3I	CTNAG	8 cut(s)	922, 1283, 1356, 1827, 1903, 1909, 2392, 2400
HpySE526I	ACGT	3 cut(s)	838, 1153, 1771
Hsp92I	GRCGYC	1 cut(s)	14
Kpn2I	TCCGGA	2 cut(s)	671, 2479
KpnI	GGTACC	2 cut(s)	373, 1872
Ksp22I	TGATCA	1 cut(s)	547
LguI	GCTCTTC	1 cut(s)	1602
LmnI	GCTCC	6 cut(s)	10, 220, 1036, 1088, 1446, 2077
Lsp1109I	GCAGC	5 cut(s)	345, 974, 1086, 1775, 2285
LweI	GCATC	6 cut(s)	362, 637, 1216, 1491, 1793, 2212
MaeI	CTAG	5 cut(s)	311, 704, 956, 1458, 2150
MaeII	ACGT	3 cut(s)	838, 1153, 1771
MaeIII	GTNAC	3 cut(s)	316, 1089, 2087
MfeI	CAATTG	1 cut(s)	477
MflI	RGATCY	3 cut(s)	224, 448, 877
MhlI	GDGCHC	4 cut(s)	1777, 1894, 1936, 1984
MlyI	GAGTC	4 cut(s)	41, 188, 1216, 2444
MmeI	TCCRAC	5 cut(s)	32, 162, 218, 519, 1315
Mph1103I	ATGCAT	1 cut(s)	1506
MroI	TCCGGA	2 cut(s)	671, 2479
MroXI	GAANNNNTTC	2 cut(s)	576, 1596
MseI	TTAA	9 cut(s)	483, 761, 789, 908, 1194, 1259, 1290, 1388, 1620
MslI	CAYNNNNRTG	3 cut(s)	422, 801, 1400
MspI	CCGG	5 cut(s)	118, 672, 1329, 2169, 2480
MspR9I	CCNGG	8 cut(s)	118, 220, 241, 716, 815, 1022, 1930, 2139
MunI	CAATTG	1 cut(s)	477
Mva1269I	GAATGC	2 cut(s)	335, 1159
MvaI	CCWGG	7 cut(s)	220, 241, 716, 815, 1022, 1930, 2139
MwoI	GCNNNNNNNGC	9 cut(s)	11, 67, 434, 583, 1583, 1592, 1772, 1781, 2069
NciI	CCSGG	1 cut(s)	118
NlaIV	GGNNCC	9 cut(s)	6, 371, 1026, 1084, 1531, 1814, 1870, 1934, 2032
NmuCI	GTSAC	3 cut(s)	316, 1089, 2087
NsiI	ATGCAT	1 cut(s)	1506
NspI	RCATGY	2 cut(s)	43, 280
PaeR7I	CTCGAG	2 cut(s)	1496, 2101
PagI	TCATGA	2 cut(s)	417, 2329
PasI	CCCWGGG	1 cut(s)	1929
PciSI	GCTCTTC	1 cut(s)	1602
PctI	GAATGC	2 cut(s)	335, 1159
PdmI	GAANNNNTTC	2 cut(s)	576, 1596
PfeI	GAWTC	5 cut(s)	236, 766, 2438, 2483, 2489
PflFI	GACNNNGTC	1 cut(s)	13
PinAI	ACCGGT	1 cut(s)	1328
PkrI	GCNGC	7 cut(s)	335, 989, 1101, 1104, 1576, 1765, 2275
PleI	GAGTC	4 cut(s)	41, 187, 1215, 2444
PpsI	GAGTC	4 cut(s)	41, 187, 1215, 2444
Ppu21I	YACGTR	1 cut(s)	1772
PshAI	GACNNNNGTC	1 cut(s)	2475
PshBI	ATTAAT	2 cut(s)	761, 789
Psp124BI	GAGCTC	1 cut(s)	1984
Psp6I	CCWGG	7 cut(s)	218, 239, 714, 813, 1020, 1928, 2137
PspFI	CCCAGC	2 cut(s)	291, 506
PspGI	CCWGG	7 cut(s)	218, 239, 714, 813, 1020, 1928, 2137
PspN4I	GGNNCC	9 cut(s)	6, 371, 1026, 1084, 1531, 1814, 1870, 1934, 2032
PspOMI	GGGCCC	1 cut(s)	1932
PspPI	GGNCC	8 cut(s)	120, 199, 862, 1174, 1812, 1932, 1933, 2477
PspXI	VCTCGAGB	1 cut(s)	2101
PstNI	CAGNNNCTG	1 cut(s)	2399
PsuI	RGATCY	3 cut(s)	224, 448, 877
PsyI	GACNNNGTC	1 cut(s)	13
RsaI	GTAC	6 cut(s)	371, 723, 1256, 1375, 1870, 2099
RsaNI	GTAC	6 cut(s)	370, 722, 1255, 1374, 1869, 2098
RseI	CAYNNNNRTG	3 cut(s)	422, 801, 1400
Rsr2I	CGGWCCG	1 cut(s)	2477
RsrII	CGGWCCG	1 cut(s)	2477
SacI	GAGCTC	1 cut(s)	1984
SapI	GCTCTTC	1 cut(s)	1602
SaqAI	TTAA	9 cut(s)	483, 761, 789, 908, 1194, 1259, 1290, 1388, 1620
SatI	GCNGC	7 cut(s)	334, 988, 1100, 1103, 1575, 1764, 2274
Sau96I	GGNCC	8 cut(s)	120, 199, 862, 1174, 1812, 1932, 1933, 2477
ScaI	AGTACT	2 cut(s)	723, 1375
SchI	GAGTC	4 cut(s)	41, 188, 1216, 2444
ScrFI	CCNGG	8 cut(s)	118, 220, 241, 716, 815, 1022, 1930, 2139
SduI	GDGCHC	4 cut(s)	1777, 1894, 1936, 1984
SfaNI	GCATC	6 cut(s)	362, 637, 1216, 1491, 1793, 2212
Sfr274I	CTCGAG	2 cut(s)	1496, 2101
SgrAI	CRCCGGYG	1 cut(s)	1328
SinI	GGWCC	5 cut(s)	120, 199, 862, 1174, 2477
SlaI	CTCGAG	2 cut(s)	1496, 2101
SmiI	ATTTAAAT	2 cut(s)	1389, 1621
SmiMI	CAYNNNNRTG	3 cut(s)	422, 801, 1400
SmlI	CTYRAG	5 cut(s)	56, 1496, 1510, 1580, 2101
SmoI	CTYRAG	5 cut(s)	56, 1496, 1510, 1580, 2101
SpeI	ACTAGT	1 cut(s)	955
SsiI	CCGC	9 cut(s)	228, 250, 468, 1102, 1204, 1220, 1574, 2190, 2217
SspMI	CTAG	5 cut(s)	311, 704, 956, 1458, 2150
SstI	GAGCTC	1 cut(s)	1984
StyD4I	CCNGG	8 cut(s)	116, 218, 239, 714, 813, 1020, 1928, 2137
StyI	CCWWGG	2 cut(s)	1996, 2149
SwaI	ATTTAAAT	2 cut(s)	1389, 1621
TaaI	ACNGT	3 cut(s)	638, 1373, 1606
TaiI	ACGT	3 cut(s)	841, 1156, 1774
TaqI	TCGA	9 cut(s)	24, 129, 246, 580, 734, 1497, 1961, 2102, 2283
TaqII	GACCGA	1 cut(s)	2465
TatI	WGTACW	4 cut(s)	721, 1254, 1373, 2097
TauI	GCSGC	2 cut(s)	1105, 1577
TfiI	GAWTC	5 cut(s)	236, 766, 2438, 2483, 2489
Tru1I	TTAA	9 cut(s)	483, 761, 789, 908, 1194, 1259, 1290, 1388, 1620
Tru9I	TTAA	9 cut(s)	483, 761, 789, 908, 1194, 1259, 1290, 1388, 1620
TscAI	CASTG	6 cut(s)	643, 716, 970, 1189, 1257, 1947
TseFI	GTSAC	3 cut(s)	316, 1089, 2087
TseI	GCWGC	5 cut(s)	333, 987, 1099, 1763, 2273
Tsp45I	GTSAC	3 cut(s)	316, 1089, 2087
TspGWI	ACGGA	5 cut(s)	172, 212, 607, 1835, 2043
TspRI	CASTG	6 cut(s)	643, 716, 970, 1189, 1257, 1947
Tth111I	GACNNNGTC	1 cut(s)	13
VneI	GTGCAC	1 cut(s)	1773
VpaK11BI	GGWCC	5 cut(s)	120, 199, 862, 1174, 2477
VspI	ATTAAT	2 cut(s)	761, 789
XagI	CCTNNNNNAGG	1 cut(s)	1355
XceI	RCATGY	2 cut(s)	43, 280
XcmI	CCANNNNNNNNNTGG	2 cut(s)	288, 2125
XhoI	CTCGAG	2 cut(s)	1496, 2101
XmaJI	CCTAGG	1 cut(s)	2149
XmiI	GTMKAC	2 cut(s)	147, 1296
XmnI	GAANNNNTTC	2 cut(s)	576, 1596
XspI	CTAG	5 cut(s)	311, 704, 956, 1458, 2150
ZrmI	AGTACT	2 cut(s)	723, 1375
Zsp2I	ATGCAT	1 cut(s)	1506

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.