Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0012670.1

Orthogroup ID

OG0004705

Physical Location & Seq

Genomic Coordinates Forward (+)

25370 .. 35212

Gene Structure 9843 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0012670.1_g000007.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2373 bp

atgtcgtcggccttcgaccatgtgcaggacatgcacgacgcctccctcaagcctcgcttcctccacaccctcatcagagaccatctccccgacgataacctcccctcccgcacctcattcgacctctccaacctcgtccacatgatcaaaacccacaacctcctctccgagtccgtacaagatccgacggaccagaagctagtcactcactggagatccgccgttgattcctgggtcgaccgcttgctgctgctcgtttccagtgacatgccagataaatgctgggccggaatttgtttgctaggagtgacttgtcaggaatgcagctctgatcgattcttggcatcatactctgtttggtaccagaagcttgtatcacctcttcaggtaaccaatgcatacgatctttctcaaatgaatgcgagggagaatggtcttaagcatttcaatcctcttgagaaccccacggttgtgagatcaacactaaatggttccatcatgtgttttatgcaggttgaagatgctattgcttcaaaaattctgtctggaaaatgtagtttcaatatgctgaagaaacttgctcattgcctggcattaataccaaaatcaaaaggagatgaggaaagctggtcattaatgattcagaagattttattgtcaattaatcgtcatctgaatgatgttttccagggttttgaggaagaaactaaacgtcatgaaggtattagacttttggttcctcctgggaaagacccccctcctcccttgggggaccattcattaacaggagaagcctcagaagacgcaagaaagaggtctcatagttcgctggtctccagtgtctctgcactgatgatatgctgctctacaatgctaaccagttcataccctgttcaggtgaccgcccctattcactccttattagcccttattgagagagtattggatgtggatggctccttgtcacgctccttgcggctgtttatgactgccatgcagcaagagttcgtttgttcggaacttccacgtttgcactcgtatagtttggacctccttactgcaatctttaagggtggccgcagtcaagttttaccgcatgaagcacatatagtgcatttgctttcagtgtacttaaaaagatgtgtattgccagaattgagggttaaggtctactcaatcacaaagattttgctgatatccacgggtgtcggagtgggagtatgccttgcacaggaagtcgtgaacagcgcttttgttgatttgaatcccattgttacggagaatagtagtgccagcgcaaagccctcaaccgaagcattgctccaaacaccacaacctagcaatagaaagagaaagcatggaacttcgatcacatctctcgaggtgcataacccaagtagtttggagttgggaacccccaagaacaatacaagatgttcaatttctgtgcaaatagccgcacttgaggcattagaagctcttctgactgtggatggtgtatttaaatctgaaggatggcgatcagatgttgatcttcttctaataaacatagctacaaattccttgaaagggggacttgctagtgagaacacaagcatttatcagccaaatgaacctactgatgtttggggtgatatacagcttgcagctctacgtgcacttttggcgtctttcttgtcttcatctcgtgtccgtcccccttacttagctcagggtgttgatcttttccgtagaggcaagcttgaaagtggtaccaaacttgctgaattttgtgctcatgctctcttagtcttagaggtgcttatacatcccagggccctcccactggcagatttctccaatacgactagcattgatgaaagagttcaccacaaatacccaggaaatatctactctggtagtctaaagcacagaacctcacattcaactgacatgcagggaacggtgcatgatgctcctaatttatatcacgatgaactgtactcaagctggattgaaaccagtaaagaaatggtagcacccgggaatgacctaggcaagaccatgcagattggagaaccatccaaaattgcagcagttcatggcaatcaaattatttcagcagatgcttcacttagcaaagaaaatgaagccagaagggaaaaggagattgtagcagcgaccattgactatgtgaagattagaggaaatggagatgacagtatggtcgaacctcttcctgaagacatggaaatggagcaatatcaaggagttaccaatatggtcgcagatcctgagaacagcaagggatttgcatatgggataactaatgattcggatacagactcaattcctgatattgtggacgtcggtccagattctgattctgaatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RIX1

Protein Analysis

790

Amino Acids

86.98

Weight (kDa)

5.64

Isoelectric Point (pI)

34.02

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004705)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30240 AT1G30240
fragaria_vesca	FvH4_5g22640 FvH4_5g22640 FvH4_5g22640 FvH4_5g22640 FvH4_5g22640 FvH4_5g22640 FvH4_5g22640
malus_domestica	MD09G1289100.v1.1 MD09G1289200.v1.1 MD09G1292100.v1.1 MD17G1284000.v1.1
prunus_persica	Prupe.3G003400_v2.0.a1 Prupe.6G159300_v2.0.a1
pyrus_communis	pycom09g19730 pycom17g27990
rosa_chinensis	RchiOBHm_Chr7g0211051
rosa_laevigata	RLG00000003025
rosa_multiflora	Rmu_sc0012670.1_g000007
rosa_roxburghii	Rroxscaffold_3G00248140
rosa_rugosa	Rorug07G0124000
rosa_samantha	Rh7AG255800 Rh7AG256000 Rh7AG256600 Rh7BG250200 Rh7CG272200 Rh7CG272400 Rh7CG273100 Rh7DG263000
rosa_wichuraiana	Rw7G021880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2204
AatII	GACGTC	1 cut(s)	2349
Acc36I	ACCTGC	1 cut(s)	502
Acc65I	GGTACC	2 cut(s)	360, 1751
AccB1I	GGYRCC	2 cut(s)	360, 1751
AccI	GTMKAC	2 cut(s)	237, 1170
AciI	CCGC	8 cut(s)	109, 219, 241, 903, 976, 1078, 1094, 1458
AclWI	GGATC	3 cut(s)	176, 210, 2264
AcoI	YGGCCR	1 cut(s)	1075
AcsI	RAATTY	4 cut(s)	291, 537, 1558, 1766
AcuI	CTGAAG	4 cut(s)	368, 590, 1530, 2241
AcyI	GRCGYC	3 cut(s)	39, 1667, 2346
AfaI	GTAC	5 cut(s)	177, 362, 1130, 1753, 1982
AfeI	AGCGCT	1 cut(s)	1249
AfiI	CCNNNNNNNGG	6 cut(s)	25, 767, 895, 1231, 1569, 1825
AflII	CTTAAG	1 cut(s)	437
AjnI	CCWGG	6 cut(s)	230, 588, 687, 742, 1811, 1879
AleI	CACNNNNGTG	1 cut(s)	470
Alw21I	GWGCWC	2 cut(s)	1660, 1777
Alw26I	GTCTC	4 cut(s)	72, 822, 838, 847
Alw44I	GTGCAC	1 cut(s)	1656
AlwI	GGATC	3 cut(s)	176, 210, 2264
AlwNI	CAGNNNCTG	2 cut(s)	2273, 2360
Ama87I	CYCGRG	2 cut(s)	1379, 2021
Aor51HI	AGCGCT	1 cut(s)	1249
AoxI	GGCC	4 cut(s)	9, 285, 1075, 1815
ApaI	GGGCCC	1 cut(s)	1819
ApaLI	GTGCAC	1 cut(s)	1656
ApeKI	GCWGC	8 cut(s)	247, 250, 324, 861, 997, 1646, 2072, 2156
ApoI	RAATTY	4 cut(s)	291, 537, 1558, 1766
ArsI	GACNNNNNNTTYG	2 cut(s)	527, 559
AseI	ATTAAT	3 cut(s)	596, 635, 663
Asp700I	GAANNNNTTC	3 cut(s)	1479, 1863, 2214
Asp718I	GGTACC	2 cut(s)	360, 1751
AspA2I	CCTAGG	1 cut(s)	2032
AspLEI	GCGC	2 cut(s)	1250, 1298
AspS9I	GGNCC	7 cut(s)	190, 285, 772, 1048, 1815, 1816, 2351
AsuC2I	CCSGG	2 cut(s)	2022, 2023
AsuHPI	GGTGA	4 cut(s)	369, 910, 1643, 1859
AvaI	CYCGRG	2 cut(s)	1379, 2021
AvaII	GGWCC	4 cut(s)	190, 772, 1048, 2351
AvrII	CCTAGG	1 cut(s)	2032
BaeGI	GKGCMC	2 cut(s)	1660, 1819
BanI	GGYRCC	2 cut(s)	360, 1751
BanII	GRGCYC	1 cut(s)	1819
BarI	GAAGNNNNNNTAC	2 cut(s)	366, 398
BauI	CACGAG	1 cut(s)	1686
BbsI	GAAGAC	3 cut(s)	807, 1671, 2229
Bbv12I	GWGCWC	2 cut(s)	1660, 1777
BbvI	GCAGC	8 cut(s)	234, 237, 336, 848, 1009, 1658, 2084, 2168
BccI	CCATC	6 cut(s)	90, 503, 947, 1487, 1509, 2068
BceAI	ACGGC	1 cut(s)	206
BcgI	CGANNNNNNTGC	2 cut(s)	100, 134
BciT130I	CCWGG	6 cut(s)	232, 590, 689, 744, 1813, 1881
BciVI	GTATCC	1 cut(s)	2311
BclI	TGATCA	1 cut(s)	144
BcnI	CCSGG	2 cut(s)	2022, 2023
BcoDI	GTCTC	4 cut(s)	72, 822, 838, 847
BfaI	CTAG	6 cut(s)	200, 302, 1338, 1581, 1848, 2033
BfoI	RGCGCY	1 cut(s)	1251
BfrI	CTTAAG	1 cut(s)	437
BfuAI	ACCTGC	1 cut(s)	502
BfuI	GTATCC	1 cut(s)	2311
BlnI	CCTAGG	1 cut(s)	2032
Bme1390I	CCNGG	8 cut(s)	232, 590, 689, 744, 1813, 1881, 2022, 2023
Bme18I	GGWCC	4 cut(s)	190, 772, 1048, 2351
BmeT110I	CYCGRG	2 cut(s)	1379, 2021
BmgT120I	GGNCC	7 cut(s)	190, 285, 772, 1048, 1815, 1816, 2351
BmiI	GGNNCC	8 cut(s)	362, 493, 738, 773, 958, 1414, 1753, 1817
BmrFI	CCNGG	8 cut(s)	232, 590, 689, 744, 1813, 1881, 2022, 2023
BmsI	GCATC	4 cut(s)	353, 511, 1942, 2095
BoxI	GACNNNNGTC	1 cut(s)	2349
BpiI	GAAGAC	3 cut(s)	807, 1671, 2229
BplI	GAGNNNNNCTC	2 cut(s)	69, 101
BpmI	CTGGAG	2 cut(s)	232, 820
Bpu10I	CCTNAGC	1 cut(s)	1710
BpuEI	CTTGAG	4 cut(s)	32, 476, 1484, 1969
BpuMI	CCSGG	2 cut(s)	2022, 2023
Bsa29I	ATCGAT	1 cut(s)	334
BsaAI	YACGTR	1 cut(s)	1655
BsaBI	GATNNNNATC	3 cut(s)	1263, 1519, 1530
BsaHI	GRCGYC	3 cut(s)	39, 1667, 2346
BsaI	GGTCTC	3 cut(s)	72, 822, 838
BsaXI	ACNNNNNCTCC	8 cut(s)	26, 56, 89, 119, 149, 179, 1203, 1233
Bsc4I	CCNNNNNNNGG	6 cut(s)	25, 767, 895, 1231, 1569, 1825
Bse1I	ACTGG	6 cut(s)	215, 261, 837, 879, 1830, 2001
Bse3DI	GCAATG	2 cut(s)	583, 1316
Bse8I	GATNNNNATC	3 cut(s)	1263, 1519, 1530
BseBI	CCWGG	6 cut(s)	232, 590, 689, 744, 1813, 1881
BseCI	ATCGAT	1 cut(s)	334
BseGI	GGATG	6 cut(s)	952, 958, 1498, 1520, 1807, 2060
BseJI	GATNNNNATC	3 cut(s)	1263, 1519, 1530
BseLI	CCNNNNNNNGG	6 cut(s)	25, 767, 895, 1231, 1569, 1825
BseMI	GCAATG	2 cut(s)	583, 1316
BseMII	CTCAG	3 cut(s)	810, 1724, 2265
BseNI	ACTGG	6 cut(s)	215, 261, 837, 879, 1830, 2001
BseRI	GAGGAG	2 cut(s)	152, 750
BseSI	GKGCMC	2 cut(s)	1660, 1819
BseXI	GCAGC	8 cut(s)	234, 237, 336, 848, 1009, 1658, 2084, 2168
BseYI	CCCAGC	1 cut(s)	282
BsgI	GTGCAG	2 cut(s)	44, 831
Bsh1285I	CGRYCG	1 cut(s)	241
BshFI	GGCC	4 cut(s)	11, 287, 1077, 1817
BshNI	GGYRCC	2 cut(s)	360, 1751
BshVI	ATCGAT	1 cut(s)	334
BsiEI	CGRYCG	1 cut(s)	241
BsiHKAI	GWGCWC	2 cut(s)	1660, 1777
BsiHKCI	CYCGRG	2 cut(s)	1379, 2021
BsiSI	CCGG	2 cut(s)	288, 2022
BslFI	GGGAC	3 cut(s)	785, 1587, 1680
BslI	CCNNNNNNNGG	6 cut(s)	25, 767, 895, 1231, 1569, 1825
BsmAI	GTCTC	4 cut(s)	72, 822, 838, 847
BsmFI	GGGAC	3 cut(s)	785, 1587, 1680
BsmI	GAATGC	2 cut(s)	326, 424
BsnI	GGCC	4 cut(s)	11, 287, 1077, 1817
Bso31I	GGTCTC	3 cut(s)	72, 822, 838
BsoBI	CYCGRG	2 cut(s)	1379, 2021
Bsp120I	GGGCCC	1 cut(s)	1815
Bsp1286I	GDGCHC	3 cut(s)	1660, 1777, 1819
BspACI	CCGC	8 cut(s)	109, 219, 241, 903, 976, 1078, 1094, 1458
BspANI	GGCC	4 cut(s)	11, 287, 1077, 1817
BspCNI	CTCAG	3 cut(s)	809, 1723, 2266
BspDI	ATCGAT	1 cut(s)	334
BspHI	TCATGA	1 cut(s)	715
BspLI	GGNNCC	8 cut(s)	362, 493, 738, 773, 958, 1414, 1753, 1817
BspMI	ACCTGC	1 cut(s)	502
BspPI	GGATC	3 cut(s)	176, 210, 2264
BspQI	GCTCTTC	1 cut(s)	1485
BspT107I	GGYRCC	2 cut(s)	360, 1751
BspTI	CTTAAG	1 cut(s)	437
BspTNI	GGTCTC	3 cut(s)	72, 822, 838
BsrDI	GCAATG	2 cut(s)	583, 1316
BsrI	ACTGG	6 cut(s)	215, 261, 837, 879, 1830, 2001
BssNI	GRCGYC	3 cut(s)	39, 1667, 2346
BssSI	CACGAG	1 cut(s)	1686
BssT1I	CCWWGG	2 cut(s)	765, 2032
Bst2BI	CACGAG	1 cut(s)	1686
Bst2UI	CCWGG	6 cut(s)	232, 590, 689, 744, 1813, 1881
Bst4CI	ACNGT	5 cut(s)	469, 1489, 1945, 1980, 2201
Bst6I	CTCTTC	3 cut(s)	387, 1485, 2220
BstACI	GRCGYC	3 cut(s)	39, 1667, 2346
BstAFI	CTTAAG	1 cut(s)	437
BstAPI	GCANNNNNTGC	1 cut(s)	31
BstBAI	YACGTR	1 cut(s)	1655
BstC8I	GCNNGC	4 cut(s)	245, 1294, 1644, 1739
BstDEI	CTNAG	7 cut(s)	796, 1705, 1710, 1786, 1792, 2114, 2274
BstDSI	CCRYGG	2 cut(s)	465, 1200
BstEII	GGTNACC	2 cut(s)	388, 898
BstENI	CCTNNNNNAGG	1 cut(s)	1229
BstF5I	GGATG	6 cut(s)	952, 958, 1498, 1520, 1807, 2060
BstH2I	RGCGCY	1 cut(s)	1251
BstHHI	GCGC	2 cut(s)	1250, 1298
BstMAI	GTCTC	4 cut(s)	72, 822, 838, 847
BstMCI	CGRYCG	1 cut(s)	241
BstMWI	GCNNNNNNNGC	5 cut(s)	31, 1466, 1475, 1655, 1664
BstNI	CCWGG	6 cut(s)	232, 590, 689, 744, 1813, 1881
BstNSI	RCATGY	3 cut(s)	34, 271, 1936
BstPAI	GACNNNNGTC	1 cut(s)	2349
BstPI	GGTNACC	2 cut(s)	388, 898
BstSCI	CCNGG	8 cut(s)	230, 588, 687, 742, 1811, 1879, 2020, 2021
BstSLI	GKGCMC	2 cut(s)	1660, 1819
BstV1I	GCAGC	8 cut(s)	234, 237, 336, 848, 1009, 1658, 2084, 2168
BstV2I	GAAGAC	3 cut(s)	807, 1671, 2229
BstX2I	RGATCY	3 cut(s)	181, 215, 2269
BstYI	RGATCY	3 cut(s)	181, 215, 2269
Bsu15I	ATCGAT	1 cut(s)	334
BsuI	GTATCC	1 cut(s)	2311
BsuRI	GGCC	4 cut(s)	11, 287, 1077, 1817
BsuTUI	ATCGAT	1 cut(s)	334
BtgI	CCRYGG	2 cut(s)	465, 1200
BtsCI	GGATG	6 cut(s)	952, 958, 1498, 1520, 1807, 2060
BtsIMutI	CAGTG	6 cut(s)	208, 268, 844, 848, 1131, 1823
BveI	ACCTGC	1 cut(s)	502
Cac8I	GCNNGC	4 cut(s)	245, 1294, 1644, 1739
CaiI	CAGNNNCTG	2 cut(s)	2273, 2360
CciI	TCATGA	1 cut(s)	715
CfoI	GCGC	2 cut(s)	1250, 1298
Cfr13I	GGNCC	7 cut(s)	190, 285, 772, 1048, 1815, 1816, 2351
Cfr9I	CCCGGG	1 cut(s)	2021
ClaI	ATCGAT	1 cut(s)	334
CseI	GACGC	3 cut(s)	47, 812, 1656
Csp6I	GTAC	5 cut(s)	176, 361, 1129, 1752, 1981
CviQI	GTAC	5 cut(s)	176, 361, 1129, 1752, 1981
DdeI	CTNAG	7 cut(s)	796, 1705, 1710, 1786, 1792, 2114, 2274
DraI	TTTAAA	1 cut(s)	1504
DrdI	GACNNNNNNGTC	1 cut(s)	2204
DseDI	GACNNNNNNGTC	1 cut(s)	2204
EaeI	YGGCCR	1 cut(s)	1075
Eam1104I	CTCTTC	3 cut(s)	387, 1485, 2220
EarI	CTCTTC	3 cut(s)	387, 1485, 2220
EciI	GGCGGA	1 cut(s)	208
Eco130I	CCWWGG	2 cut(s)	765, 2032
Eco24I	GRGCYC	1 cut(s)	1819
Eco31I	GGTCTC	3 cut(s)	72, 822, 838
Eco32I	GATATC	1 cut(s)	1197
Eco47I	GGWCC	4 cut(s)	190, 772, 1048, 2351
Eco47III	AGCGCT	1 cut(s)	1249
Eco57I	CTGAAG	4 cut(s)	368, 590, 1530, 2241
Eco88I	CYCGRG	2 cut(s)	1379, 2021
Eco91I	GGTNACC	2 cut(s)	388, 898
EcoNI	CCTNNNNNAGG	1 cut(s)	1229
EcoO109I	RGGNCCY	2 cut(s)	1815, 1816
EcoO65I	GGTNACC	2 cut(s)	388, 898
EcoRII	CCWGG	6 cut(s)	230, 588, 687, 742, 1811, 1879
EcoRV	GATATC	1 cut(s)	1197
EcoT14I	CCWWGG	2 cut(s)	765, 2032
EcoT22I	ATGCAT	1 cut(s)	400
EcoT38I	GRGCYC	1 cut(s)	1819
ErhI	CCWWGG	2 cut(s)	765, 2032
FalI	AAGNNNNNCTT	4 cut(s)	41, 73, 1560, 1592
FaqI	GGGAC	3 cut(s)	785, 1587, 1680
FauI	CCCGC	1 cut(s)	116
FauNDI	CATATG	1 cut(s)	2296
FbaI	TGATCA	1 cut(s)	144
FblI	GTMKAC	2 cut(s)	237, 1170
FokI	GGATG	6 cut(s)	959, 965, 1505, 1527, 1794, 2047
FriOI	GRGCYC	1 cut(s)	1819
FspBI	CTAG	6 cut(s)	200, 302, 1338, 1581, 1848, 2033
GlaI	GCGC	2 cut(s)	1249, 1297
GsaI	CCCAGC	1 cut(s)	286
GsuI	CTGGAG	2 cut(s)	232, 820
HaeII	RGCGCY	1 cut(s)	1251
HaeIII	GGCC	4 cut(s)	11, 287, 1077, 1817
HapII	CCGG	2 cut(s)	288, 2022
HgaI	GACGC	3 cut(s)	47, 812, 1656
HhaI	GCGC	2 cut(s)	1250, 1298
Hin1I	GRCGYC	3 cut(s)	39, 1667, 2346
Hin6I	GCGC	2 cut(s)	1248, 1296
HinP1I	GCGC	2 cut(s)	1248, 1296
HincII	GTYRAC	1 cut(s)	238
HindII	GTYRAC	1 cut(s)	238
HindIII	AAGCTT	2 cut(s)	368, 1739
HinfI	GANTC	9 cut(s)	170, 227, 336, 640, 1264, 2312, 2324, 2357, 2363
HpaII	CCGG	2 cut(s)	288, 2022
HphI	GGTGA	4 cut(s)	369, 910, 1643, 1859
Hpy166II	GTNNAC	8 cut(s)	139, 238, 1129, 1171, 1243, 1658, 1867, 2344
Hpy8I	GTNNAC	8 cut(s)	139, 238, 1129, 1171, 1243, 1658, 1867, 2344
Hpy99I	CGWCG	5 cut(s)	10, 41, 95, 190, 2351
HpyAV	CCTTC	4 cut(s)	22, 713, 1505, 2130
HpyCH4III	ACNGT	5 cut(s)	469, 1489, 1945, 1980, 2201
HpyCH4IV	ACGT	4 cut(s)	712, 1027, 1654, 2346
HpyF10VI	GCNNNNNNNGC	5 cut(s)	31, 1466, 1475, 1655, 1664
HpyF3I	CTNAG	7 cut(s)	796, 1705, 1710, 1786, 1792, 2114, 2274
HpySE526I	ACGT	4 cut(s)	712, 1027, 1654, 2346
Hsp92I	GRCGYC	3 cut(s)	39, 1667, 2346
HspAI	GCGC	2 cut(s)	1248, 1296
KpnI	GGTACC	2 cut(s)	364, 1755
Ksp22I	TGATCA	1 cut(s)	144
LguI	GCTCTTC	1 cut(s)	1485
LmnI	GCTCC	5 cut(s)	962, 974, 1326, 1960, 2236
Lsp1109I	GCAGC	8 cut(s)	234, 237, 336, 848, 1009, 1658, 2084, 2168
LweI	GCATC	4 cut(s)	353, 511, 1942, 2095
MaeI	CTAG	6 cut(s)	200, 302, 1338, 1581, 1848, 2033
MaeII	ACGT	4 cut(s)	712, 1027, 1654, 2346
MaeIII	GTNAC	8 cut(s)	202, 263, 307, 388, 898, 963, 1273, 2251
MflI	RGATCY	3 cut(s)	181, 215, 2269
MhlI	GDGCHC	3 cut(s)	1660, 1777, 1819
MlyI	GAGTC	2 cut(s)	179, 2318
MmeI	TCCRAC	3 cut(s)	153, 209, 1189
Mph1103I	ATGCAT	1 cut(s)	400
MroXI	GAANNNNTTC	3 cut(s)	1479, 1863, 2214
MseI	TTAA	9 cut(s)	438, 596, 635, 663, 782, 1068, 1133, 1164, 1503
MslI	CAYNNNNRTG	3 cut(s)	470, 675, 2231
MspCI	CTTAAG	1 cut(s)	437
MspI	CCGG	2 cut(s)	288, 2022
MspR9I	CCNGG	8 cut(s)	232, 590, 689, 744, 1813, 1881, 2022, 2023
Mva1269I	GAATGC	2 cut(s)	326, 424
MvaI	CCWGG	6 cut(s)	232, 590, 689, 744, 1813, 1881
MwoI	GCNNNNNNNGC	5 cut(s)	31, 1466, 1475, 1655, 1664
NciI	CCSGG	2 cut(s)	2022, 2023
NdeI	CATATG	1 cut(s)	2296
NlaIV	GGNNCC	8 cut(s)	362, 493, 738, 773, 958, 1414, 1753, 1817
NmuCI	GTSAC	5 cut(s)	202, 263, 307, 898, 963
NsiI	ATGCAT	1 cut(s)	400
NspI	RCATGY	3 cut(s)	34, 271, 1936
OliI	CACNNNNGTG	1 cut(s)	470
PaeR7I	CTCGAG	1 cut(s)	1379
PagI	TCATGA	1 cut(s)	715
PasI	CCCWGGG	1 cut(s)	1812
PciSI	GCTCTTC	1 cut(s)	1485
PctI	GAATGC	2 cut(s)	326, 424
PdmI	GAANNNNTTC	3 cut(s)	1479, 1863, 2214
PfeI	GAWTC	7 cut(s)	227, 336, 640, 1264, 2312, 2357, 2363
PleI	GAGTC	2 cut(s)	178, 2318
PpsI	GAGTC	2 cut(s)	178, 2318
Ppu21I	YACGTR	1 cut(s)	1655
PshAI	GACNNNNGTC	1 cut(s)	2349
PshBI	ATTAAT	3 cut(s)	596, 635, 663
Psp6I	CCWGG	6 cut(s)	230, 588, 687, 742, 1811, 1879
PspEI	GGTNACC	2 cut(s)	388, 898
PspFI	CCCAGC	1 cut(s)	282
PspGI	CCWGG	6 cut(s)	230, 588, 687, 742, 1811, 1879
PspN4I	GGNNCC	8 cut(s)	362, 493, 738, 773, 958, 1414, 1753, 1817
PspOMI	GGGCCC	1 cut(s)	1815
PspPI	GGNCC	7 cut(s)	190, 285, 772, 1048, 1815, 1816, 2351
PstNI	CAGNNNCTG	2 cut(s)	2273, 2360
PsuI	RGATCY	3 cut(s)	181, 215, 2269
RsaI	GTAC	5 cut(s)	177, 362, 1130, 1753, 1982
RsaNI	GTAC	5 cut(s)	176, 361, 1129, 1752, 1981
RseI	CAYNNNNRTG	3 cut(s)	470, 675, 2231
SalI	GTCGAC	1 cut(s)	236
SapI	GCTCTTC	1 cut(s)	1485
SaqAI	TTAA	9 cut(s)	438, 596, 635, 663, 782, 1068, 1133, 1164, 1503
Sau96I	GGNCC	7 cut(s)	190, 285, 772, 1048, 1815, 1816, 2351
SchI	GAGTC	2 cut(s)	179, 2318
ScrFI	CCNGG	8 cut(s)	232, 590, 689, 744, 1813, 1881, 2022, 2023
SduI	GDGCHC	3 cut(s)	1660, 1777, 1819
SfaNI	GCATC	4 cut(s)	353, 511, 1942, 2095
Sfr274I	CTCGAG	1 cut(s)	1379
SinI	GGWCC	4 cut(s)	190, 772, 1048, 2351
SlaI	CTCGAG	1 cut(s)	1379
SmaI	CCCGGG	1 cut(s)	2023
SmiI	ATTTAAAT	1 cut(s)	1504
SmiMI	CAYNNNNRTG	3 cut(s)	470, 675, 2231
SmlI	CTYRAG	6 cut(s)	47, 437, 455, 1379, 1463, 1984
SmoI	CTYRAG	6 cut(s)	47, 437, 455, 1379, 1463, 1984
SsiI	CCGC	8 cut(s)	109, 219, 241, 903, 976, 1078, 1094, 1458
SspMI	CTAG	6 cut(s)	200, 302, 1338, 1581, 1848, 2033
StyD4I	CCNGG	8 cut(s)	230, 588, 687, 742, 1811, 1879, 2020, 2021
StyI	CCWWGG	2 cut(s)	765, 2032
SwaI	ATTTAAAT	1 cut(s)	1504
TaaI	ACNGT	5 cut(s)	469, 1489, 1945, 1980, 2201
TaiI	ACGT	4 cut(s)	715, 1030, 1657, 2349
TaqI	TCGA	7 cut(s)	15, 120, 237, 334, 1367, 1380, 2208
TaqII	GACCGA	1 cut(s)	2339
TatI	WGTACW	2 cut(s)	1128, 1980
TauI	GCSGC	3 cut(s)	979, 1080, 1460
TfiI	GAWTC	7 cut(s)	227, 336, 640, 1264, 2312, 2357, 2363
Tru1I	TTAA	9 cut(s)	438, 596, 635, 663, 782, 1068, 1133, 1164, 1503
Tru9I	TTAA	9 cut(s)	438, 596, 635, 663, 782, 1068, 1133, 1164, 1503
TscAI	CASTG	6 cut(s)	215, 268, 844, 855, 1131, 1830
TseFI	GTSAC	5 cut(s)	202, 263, 307, 898, 963
TseI	GCWGC	8 cut(s)	247, 250, 324, 861, 997, 1646, 2072, 2156
Tsp45I	GTSAC	5 cut(s)	202, 263, 307, 898, 963
TspGWI	ACGGA	5 cut(s)	163, 203, 1292, 1682, 1718
TspMI	CCCGGG	1 cut(s)	2021
TspRI	CASTG	6 cut(s)	215, 268, 844, 855, 1131, 1830
Vha464I	CTTAAG	1 cut(s)	437
VneI	GTGCAC	1 cut(s)	1656
VpaK11BI	GGWCC	4 cut(s)	190, 772, 1048, 2351
VspI	ATTAAT	3 cut(s)	596, 635, 663
XagI	CCTNNNNNAGG	1 cut(s)	1229
XapI	RAATTY	4 cut(s)	291, 537, 1558, 1766
XceI	RCATGY	3 cut(s)	34, 271, 1936
XcmI	CCANNNNNNNNNTGG	2 cut(s)	279, 2008
XhoI	CTCGAG	1 cut(s)	1379
XmaI	CCCGGG	1 cut(s)	2021
XmaJI	CCTAGG	1 cut(s)	2032
XmiI	GTMKAC	2 cut(s)	237, 1170
XmnI	GAANNNNTTC	3 cut(s)	1479, 1863, 2214
XspI	CTAG	6 cut(s)	200, 302, 1338, 1581, 1848, 2033
ZraI	GACGTC	1 cut(s)	2347
Zsp2I	ATGCAT	1 cut(s)	400

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.