Rh7DG263000

rRNA processing/ribosome biogenesis

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0004705
Physical Location & Seq
Reverse (-)
27935774 .. 27946037
10264 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG263000.1

Sequence Viewer

Length: 1893 bp
ATGTCGTCGGCCTTCGACCATGTGAAGGACATGCACGACGCCTCTCTCAAGCCTCGCTTCCTCCACACCCTCATCAGAGACCATCTCCCCGACGATAACCTCCCCTCCCGCACCTCATTCGACCTCTCCAACCTCGTCTACATGATCAAAACCCACAACCTCCTCTCCGAGTCCGTACAGGATCCCACGGACCAGAAGCTTACCACTCACTGGAGATCCGCCGTTGATTCCTGGGCCGACCGCTTGCTGCTTCTCGTTTCCAGTGACATGCCAGATAAATGCTGGGCCGGAATTTGTTTGCTAGGGGTGACTTGTCAGGAATGCAGCTCTGATCGTTTCTTGGCATCATACTCTGTTTGGTACCAGAAGCTTGTATCACCTCTTCAGTCTCCGACAACTTCTCAGTTCGTGAAGGTGGCCTCTTGTGCTTCAATGTCAGATCTCCTTACAAGGTTGGGTGGATTTCCACTTGTTAAGAAAGATGGAACTGCCCATGCTGGGAAACTCATTCCATCAGTTTTGAAGTTGTTAGATGATGATCACTCGGAGGTTGTTTGGGAAGAAGCAGTTCGATTGCTATGCATATTCATATCTTTCTTTCCAATTTCCATCAGTCGTCATTATGACAGTGTTGAAGATGCTATTGCTTCAAAAATTTTGTCTGGAAAATGTAGTTTCAATATGCTGAAGAAACTTGCTCATTGCCTGGCATTAATACCAAAATCAAAAGGAGATGAGGAAAGCTGGTCATTAATGATTCAGAAGATTTTATTGTCAATTAATCGTCATCTGAATGATGTTTTCCAGGGTTTTGAGGAAGAAACTAAACGTCATGAAGGTATTAGACTTTTGGTTCCTCCTGGGAAAGACCCCCCTCCCCCCTTGGGGGACCATACATTAACAGGAGAAGCCTCAGAAGACGCAAGAAAGAGGTCTCATAGTTCGCTGGTCTCCAGTGTCTCTGCACTGATGATATGCTGCTCTACAATGCTAACCCGTTCATACCCTGTTCAGGTGACCGCCCCTATTCACTCCTTATTAGCCCTTATTGAGAGAGTATTGGATGTGGATGGCTCCTTGTCACGCTCCTTGCGGCTGTTTATGACTGCCATGCAGCAAGAGTTCGTTTGTTCGGAACTTCCACGTTTGCACTCGTATAGTTTGGACCTCCTTACTGCAATCTTTAAGGGTGTCCGCAGTCAAGTTTTACCGCATGAAGCACATATAGTGCATTTGCTTTCAGTGTACTTAAAAAGATGTGTATTTCCAGAATTGAGGGTTAAGGTCTACTCAATCACAAAGATTTTGCTGATATCCACGGGTGTCGGAGTGGGAGTATGCCTTGCACAGGAAGTCGTGAACAGCGCTTTTGTTGATTTGAATCCCATTGTTACGGAGAATAGTAGTGCCAGCGCAAAGCCCTCAACCGAAGCATTGCTCCAAACACCACAACCTAGCAATAGAAAGAGAAAGCATGGAACTTCGATCACATCTCTCGAGGTGCATAACCCAAGTAGTTTGGAGTTGGGAACCCCCAAGAACAATACAAGATGTTCAATTTCTGTGCAAATAGCCGCACTTGAGGCATTAGAAGCTCTTCTGACTGTGGATGGTGTATTTAAATCTGAAGGATGGCGATCAGATGTTGATCTTCTTCTAATAAACATAGCTACAAATTCCTTGAAAGGAGGACTTGCTAGTGAGAACACAAGCATTTATCAGCCAAATGAACCTACTGATGTTTGGGGTGATATACAGCTTGCAGCTCTGCGTGCACTTTTGGCGTCTTTCTTGTCTTCATCTTGTGTCCGTCCCCCTTACTTAGCTCAGGGTGTTGATCTTTTCCGTAGAGGTAATTCCTTTAAGAATATGTACTCTCATTCTTTCTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RIX1

Protein Analysis

630

Amino Acids

69.65

Weight (kDa)

6.74

Isoelectric Point (pI)

43.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RIX1 PF08167 34 - 224 3.7e-34 rRNA processing/ribosome biogenesis
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 360
AccB1I GGYRCC 1 cut(s) 360
AccB7I CCANNNNNTGG 1 cut(s) 210
AccI GTMKAC 2 cut(s) 138, 1287
AciI CCGC 8 cut(s) 109, 219, 241, 1020, 1093, 1195, 1211, 1575
AclWI GGATC 3 cut(s) 176, 189, 210
AcsI RAATTY 3 cut(s) 291, 654, 1675
AcuI CTGAAG 3 cut(s) 368, 707, 1647
AcyI GRCGYC 2 cut(s) 39, 1784
AfaI GTAC 4 cut(s) 177, 362, 1247, 1874
AfeI AGCGCT 1 cut(s) 1366
AfiI CCNNNNNNNGG 8 cut(s) 25, 210, 498, 884, 885, 886, 1012, 1348
AgsI TTSAA 8 cut(s) 432, 523, 635, 651, 679, 1381, 1557, 1684
AjnI CCWGG 4 cut(s) 230, 705, 804, 859
AluBI AGCT 9 cut(s) 199, 327, 370, 744, 1595, 1670, 1759, 1766, 1826
AluI AGCT 9 cut(s) 199, 327, 370, 744, 1595, 1670, 1759, 1766, 1826
Alw21I GWGCWC 1 cut(s) 1777
Alw26I GTCTC 5 cut(s) 72, 393, 939, 955, 964
Alw44I GTGCAC 1 cut(s) 1773
AlwI GGATC 3 cut(s) 176, 189, 210
Ama87I CYCGRG 1 cut(s) 1496
Aor51HI AGCGCT 1 cut(s) 1366
AoxI GGCC 4 cut(s) 9, 234, 285, 417
ApaLI GTGCAC 1 cut(s) 1773
ApeKI GCWGC 5 cut(s) 247, 324, 978, 1114, 1763
ApoI RAATTY 3 cut(s) 291, 654, 1675
ArsI GACNNNNNNTTYG 2 cut(s) 644, 676
AseI ATTAAT 3 cut(s) 713, 752, 780
Asp700I GAANNNNTTC 2 cut(s) 567, 1596
Asp718I GGTACC 1 cut(s) 360
AspLEI GCGC 2 cut(s) 1367, 1415
AspS9I GGNCC 5 cut(s) 190, 234, 285, 889, 1165
AsuHPI GGTGA 4 cut(s) 319, 369, 1027, 1760
AvaI CYCGRG 1 cut(s) 1496
AvaII GGWCC 3 cut(s) 190, 889, 1165
BaeGI GKGCMC 1 cut(s) 1777
BamHI GGATCC 1 cut(s) 181
BanI GGYRCC 1 cut(s) 360
BarI GAAGNNNNNNTAC 2 cut(s) 366, 398
BbsI GAAGAC 2 cut(s) 924, 1788
Bbv12I GWGCWC 1 cut(s) 1777
BbvI GCAGC 5 cut(s) 234, 336, 965, 1126, 1775
BccI CCATC 7 cut(s) 90, 476, 520, 617, 1064, 1604, 1626
BceAI ACGGC 1 cut(s) 206
BcgI CGANNNNNNTGC 4 cut(s) 100, 134, 561, 595
BciT130I CCWGG 4 cut(s) 232, 707, 806, 861
BclI TGATCA 2 cut(s) 144, 538
BcoDI GTCTC 5 cut(s) 72, 393, 939, 955, 964
BfaI CTAG 3 cut(s) 302, 1455, 1698
BfoI RGCGCY 1 cut(s) 1368
BglII AGATCT 1 cut(s) 439
BisI GCNGC 7 cut(s) 248, 325, 979, 1094, 1115, 1575, 1764
BlsI GCNGC 7 cut(s) 249, 326, 980, 1095, 1116, 1576, 1765
Bme1390I CCNGG 4 cut(s) 232, 707, 806, 861
Bme18I GGWCC 3 cut(s) 190, 889, 1165
BmeT110I CYCGRG 1 cut(s) 1496
BmgT120I GGNCC 5 cut(s) 190, 234, 285, 889, 1165
BmiI GGNNCC 6 cut(s) 183, 362, 855, 890, 1075, 1531
BmrFI CCNGG 4 cut(s) 232, 707, 806, 861
BmsI GCATC 2 cut(s) 353, 628
BpiI GAAGAC 2 cut(s) 924, 1788
BplI GAGNNNNNCTC 2 cut(s) 69, 101
BpmI CTGGAG 2 cut(s) 232, 937
Bpu10I CCTNAGC 1 cut(s) 1827
BpuEI CTTGAG 2 cut(s) 32, 1601
BsaBI GATNNNNATC 4 cut(s) 537, 1380, 1636, 1647
BsaHI GRCGYC 2 cut(s) 39, 1784
BsaI GGTCTC 3 cut(s) 72, 939, 955
BsaJI CCNNGG 6 cut(s) 186, 231, 805, 860, 882, 1317
BsaXI ACNNNNNCTCC 6 cut(s) 89, 119, 149, 179, 1320, 1350
Bsc4I CCNNNNNNNGG 8 cut(s) 25, 210, 498, 884, 885, 886, 1012, 1348
Bse1I ACTGG 3 cut(s) 215, 261, 954
Bse3DI GCAATG 2 cut(s) 700, 1433
Bse8I GATNNNNATC 4 cut(s) 537, 1380, 1636, 1647
BseBI CCWGG 4 cut(s) 232, 707, 806, 861
BseDI CCNNGG 6 cut(s) 186, 231, 805, 860, 882, 1317
BseGI GGATG 4 cut(s) 1069, 1075, 1615, 1637
BseJI GATNNNNATC 4 cut(s) 537, 1380, 1636, 1647
BseLI CCNNNNNNNGG 8 cut(s) 25, 210, 498, 884, 885, 886, 1012, 1348
BseMI GCAATG 2 cut(s) 700, 1433
BseMII CTCAG 3 cut(s) 416, 927, 1841
BseNI ACTGG 3 cut(s) 215, 261, 954
BseRI GAGGAG 1 cut(s) 152
BseSI GKGCMC 1 cut(s) 1777
BseXI GCAGC 5 cut(s) 234, 336, 965, 1126, 1775
BseYI CCCAGC 2 cut(s) 282, 497
BsgI GTGCAG 1 cut(s) 948
Bsh1285I CGRYCG 1 cut(s) 241
BshFI GGCC 4 cut(s) 11, 236, 287, 419
BshNI GGYRCC 1 cut(s) 360
BsiEI CGRYCG 1 cut(s) 241
BsiHKAI GWGCWC 1 cut(s) 1777
BsiHKCI CYCGRG 1 cut(s) 1496
BsiSI CCGG 1 cut(s) 288
BslFI GGGAC 2 cut(s) 902, 1797
BslI CCNNNNNNNGG 8 cut(s) 25, 210, 498, 884, 885, 886, 1012, 1348
BsmAI GTCTC 5 cut(s) 72, 393, 939, 955, 964
BsmFI GGGAC 2 cut(s) 902, 1797
BsmI GAATGC 1 cut(s) 326
BsnI GGCC 4 cut(s) 11, 236, 287, 419
Bso31I GGTCTC 3 cut(s) 72, 939, 955
BsoBI CYCGRG 1 cut(s) 1496
Bsp1286I GDGCHC 1 cut(s) 1777
BspACI CCGC 8 cut(s) 109, 219, 241, 1020, 1093, 1195, 1211, 1575
BspANI GGCC 4 cut(s) 11, 236, 287, 419
BspCNI CTCAG 3 cut(s) 415, 926, 1840
BspHI TCATGA 1 cut(s) 832
BspLI GGNNCC 6 cut(s) 183, 362, 855, 890, 1075, 1531
BspPI GGATC 3 cut(s) 176, 189, 210
BspQI GCTCTTC 1 cut(s) 1602
BspT107I GGYRCC 1 cut(s) 360
BspTNI GGTCTC 3 cut(s) 72, 939, 955
BsrDI GCAATG 2 cut(s) 700, 1433
BsrI ACTGG 3 cut(s) 215, 261, 954
BssECI CCNNGG 6 cut(s) 186, 231, 805, 860, 882, 1317
BssNI GRCGYC 2 cut(s) 39, 1784
BssT1I CCWWGG 1 cut(s) 882
Bst2UI CCWGG 4 cut(s) 232, 707, 806, 861
Bst4CI ACNGT 2 cut(s) 629, 1606
Bst6I CTCTTC 2 cut(s) 387, 1602
BstACI GRCGYC 2 cut(s) 39, 1784
BstC8I GCNNGC 4 cut(s) 245, 1411, 1761, 1773
BstDEI CTNAG 4 cut(s) 402, 913, 1822, 1827
BstDSI CCRYGG 2 cut(s) 186, 1317
BstEII GGTNACC 1 cut(s) 1015
BstENI CCTNNNNNAGG 1 cut(s) 1346
BstF5I GGATG 4 cut(s) 1069, 1075, 1615, 1637
BstH2I RGCGCY 1 cut(s) 1368
BstHHI GCGC 2 cut(s) 1367, 1415
BstMAI GTCTC 5 cut(s) 72, 393, 939, 955, 964
BstMCI CGRYCG 1 cut(s) 241
BstMWI GCNNNNNNNGC 5 cut(s) 425, 1583, 1592, 1772, 1781
BstNI CCWGG 4 cut(s) 232, 707, 806, 861
BstNSI RCATGY 2 cut(s) 34, 271
BstPI GGTNACC 1 cut(s) 1015
BstSCI CCNGG 4 cut(s) 230, 705, 804, 859
BstSLI GKGCMC 1 cut(s) 1777
BstV1I GCAGC 5 cut(s) 234, 336, 965, 1126, 1775
BstV2I GAAGAC 2 cut(s) 924, 1788
BstX2I RGATCY 3 cut(s) 181, 215, 439
BstYI RGATCY 3 cut(s) 181, 215, 439
BsuRI GGCC 4 cut(s) 11, 236, 287, 419
BtgI CCRYGG 2 cut(s) 186, 1317
BtsCI GGATG 4 cut(s) 1069, 1075, 1615, 1637
BtsIMutI CAGTG 6 cut(s) 208, 268, 634, 961, 965, 1248
Cac8I GCNNGC 4 cut(s) 245, 1411, 1761, 1773
CciI TCATGA 1 cut(s) 832
CfoI GCGC 2 cut(s) 1367, 1415
Cfr13I GGNCC 5 cut(s) 190, 234, 285, 889, 1165
CseI GACGC 3 cut(s) 47, 929, 1773
Csp6I GTAC 4 cut(s) 176, 361, 1246, 1873
CviAII CATG 9 cut(s) 20, 31, 142, 268, 494, 833, 1111, 1214, 1475
CviQI GTAC 4 cut(s) 176, 361, 1246, 1873
DdeI CTNAG 4 cut(s) 402, 913, 1822, 1827
DraI TTTAAA 1 cut(s) 1621
Eam1104I CTCTTC 2 cut(s) 387, 1602
EarI CTCTTC 2 cut(s) 387, 1602
EciI GGCGGA 1 cut(s) 208
Eco130I CCWWGG 1 cut(s) 882
Eco31I GGTCTC 3 cut(s) 72, 939, 955
Eco32I GATATC 1 cut(s) 1314
Eco47I GGWCC 3 cut(s) 190, 889, 1165
Eco47III AGCGCT 1 cut(s) 1366
Eco57I CTGAAG 3 cut(s) 368, 707, 1647
Eco88I CYCGRG 1 cut(s) 1496
Eco91I GGTNACC 1 cut(s) 1015
EcoNI CCTNNNNNAGG 1 cut(s) 1346
EcoO65I GGTNACC 1 cut(s) 1015
EcoRII CCWGG 4 cut(s) 230, 705, 804, 859
EcoRV GATATC 1 cut(s) 1314
EcoT14I CCWWGG 1 cut(s) 882
EcoT22I ATGCAT 1 cut(s) 584
ErhI CCWWGG 1 cut(s) 882
FaeI CATG 9 cut(s) 23, 34, 145, 271, 497, 836, 1114, 1217, 1478
FalI AAGNNNNNCTT 4 cut(s) 41, 73, 1677, 1709
FaqI GGGAC 2 cut(s) 902, 1797
FatI CATG 9 cut(s) 19, 30, 141, 267, 493, 832, 1110, 1213, 1474
FauI CCCGC 1 cut(s) 116
FbaI TGATCA 2 cut(s) 144, 538
FblI GTMKAC 2 cut(s) 138, 1287
Fnu4HI GCNGC 7 cut(s) 248, 325, 979, 1094, 1115, 1575, 1764
FokI GGATG 4 cut(s) 1076, 1082, 1622, 1644
Fsp4HI GCNGC 7 cut(s) 248, 325, 979, 1094, 1115, 1575, 1764
FspBI CTAG 3 cut(s) 302, 1455, 1698
GlaI GCGC 2 cut(s) 1366, 1414
GluI GCNGC 7 cut(s) 248, 325, 979, 1094, 1115, 1575, 1764
GsaI CCCAGC 2 cut(s) 286, 501
GsuI CTGGAG 2 cut(s) 232, 937
HaeII RGCGCY 1 cut(s) 1368
HaeIII GGCC 4 cut(s) 11, 236, 287, 419
HapII CCGG 1 cut(s) 288
HgaI GACGC 3 cut(s) 47, 929, 1773
HhaI GCGC 2 cut(s) 1367, 1415
Hin1I GRCGYC 2 cut(s) 39, 1784
Hin1II CATG 9 cut(s) 23, 34, 145, 271, 497, 836, 1114, 1217, 1478
Hin6I GCGC 2 cut(s) 1365, 1413
HinP1I GCGC 2 cut(s) 1365, 1413
HindIII AAGCTT 2 cut(s) 197, 368
HinfI GANTC 4 cut(s) 170, 227, 757, 1381
HpaII CCGG 1 cut(s) 288
HphI GGTGA 4 cut(s) 319, 369, 1027, 1760
Hpy166II GTNNAC 5 cut(s) 139, 1246, 1288, 1360, 1775
Hpy188III TCNNGA 7 cut(s) 317, 409, 663, 833, 1268, 1357, 1496
Hpy8I GTNNAC 5 cut(s) 139, 1246, 1288, 1360, 1775
Hpy99I CGWCG 3 cut(s) 10, 41, 95
HpyAV CCTTC 5 cut(s) 19, 22, 406, 830, 1622
HpyCH4III ACNGT 2 cut(s) 629, 1606
HpyCH4IV ACGT 2 cut(s) 829, 1144
HpyF10VI GCNNNNNNNGC 5 cut(s) 425, 1583, 1592, 1772, 1781
HpyF3I CTNAG 4 cut(s) 402, 913, 1822, 1827
HpySE526I ACGT 2 cut(s) 829, 1144
Hsp92I GRCGYC 2 cut(s) 39, 1784
Hsp92II CATG 9 cut(s) 23, 34, 145, 271, 497, 836, 1114, 1217, 1478
HspAI GCGC 2 cut(s) 1365, 1413
KpnI GGTACC 1 cut(s) 364
Ksp22I TGATCA 2 cut(s) 144, 538
LguI GCTCTTC 1 cut(s) 1602
LmnI GCTCC 3 cut(s) 1079, 1091, 1443
Lsp1109I GCAGC 5 cut(s) 234, 336, 965, 1126, 1775
LweI GCATC 2 cut(s) 353, 628
MaeI CTAG 3 cut(s) 302, 1455, 1698
MaeII ACGT 2 cut(s) 829, 1144
MaeIII GTNAC 5 cut(s) 263, 307, 1015, 1080, 1390
MflI RGATCY 3 cut(s) 181, 215, 439
MhlI GDGCHC 1 cut(s) 1777
MluCI AATT 8 cut(s) 291, 603, 654, 777, 1271, 1557, 1675, 1855
MlyI GAGTC 1 cut(s) 179
MmeI TCCRAC 3 cut(s) 153, 416, 1306
Mph1103I ATGCAT 1 cut(s) 584
MroXI GAANNNNTTC 2 cut(s) 567, 1596
MslI CAYNNNNRTG 1 cut(s) 792
MspI CCGG 1 cut(s) 288
MspR9I CCNGG 4 cut(s) 232, 707, 806, 861
Mva1269I GAATGC 1 cut(s) 326
MvaI CCWGG 4 cut(s) 232, 707, 806, 861
MwoI GCNNNNNNNGC 5 cut(s) 425, 1583, 1592, 1772, 1781
NlaIII CATG 9 cut(s) 23, 34, 145, 271, 497, 836, 1114, 1217, 1478
NlaIV GGNNCC 6 cut(s) 183, 362, 855, 890, 1075, 1531
NmuCI GTSAC 4 cut(s) 263, 307, 1015, 1080
NsiI ATGCAT 1 cut(s) 584
NspI RCATGY 2 cut(s) 34, 271
PaeR7I CTCGAG 1 cut(s) 1496
PagI TCATGA 1 cut(s) 832
PciSI GCTCTTC 1 cut(s) 1602
PctI GAATGC 1 cut(s) 326
PdmI GAANNNNTTC 2 cut(s) 567, 1596
PfeI GAWTC 3 cut(s) 227, 757, 1381
PflMI CCANNNNNTGG 1 cut(s) 210
PkrI GCNGC 7 cut(s) 249, 326, 980, 1095, 1116, 1576, 1765
PleI GAGTC 1 cut(s) 178
PpsI GAGTC 1 cut(s) 178
PshBI ATTAAT 3 cut(s) 713, 752, 780
Psp6I CCWGG 4 cut(s) 230, 705, 804, 859
PspEI GGTNACC 1 cut(s) 1015
PspFI CCCAGC 2 cut(s) 282, 497
PspGI CCWGG 4 cut(s) 230, 705, 804, 859
PspN4I GGNNCC 6 cut(s) 183, 362, 855, 890, 1075, 1531
PspPI GGNCC 5 cut(s) 190, 234, 285, 889, 1165
PsuI RGATCY 3 cut(s) 181, 215, 439
RsaI GTAC 4 cut(s) 177, 362, 1247, 1874
RsaNI GTAC 4 cut(s) 176, 361, 1246, 1873
RseI CAYNNNNRTG 1 cut(s) 792
SapI GCTCTTC 1 cut(s) 1602
SatI GCNGC 7 cut(s) 248, 325, 979, 1094, 1115, 1575, 1764
Sau96I GGNCC 5 cut(s) 190, 234, 285, 889, 1165
SchI GAGTC 1 cut(s) 179
ScrFI CCNGG 4 cut(s) 232, 707, 806, 861
SduI GDGCHC 1 cut(s) 1777
SfaNI GCATC 2 cut(s) 353, 628
Sfr274I CTCGAG 1 cut(s) 1496
SinI GGWCC 3 cut(s) 190, 889, 1165
SlaI CTCGAG 1 cut(s) 1496
SmiI ATTTAAAT 1 cut(s) 1621
SmiMI CAYNNNNRTG 1 cut(s) 792
SmlI CTYRAG 3 cut(s) 47, 1496, 1580
SmoI CTYRAG 3 cut(s) 47, 1496, 1580
Sse9I AATT 8 cut(s) 291, 603, 654, 777, 1271, 1557, 1675, 1855
SsiI CCGC 8 cut(s) 109, 219, 241, 1020, 1093, 1195, 1211, 1575
SspMI CTAG 3 cut(s) 302, 1455, 1698
StyD4I CCNGG 4 cut(s) 230, 705, 804, 859
StyI CCWWGG 1 cut(s) 882
SwaI ATTTAAAT 1 cut(s) 1621
TaaI ACNGT 2 cut(s) 629, 1606
TaiI ACGT 2 cut(s) 832, 1147
TaqI TCGA 5 cut(s) 15, 120, 571, 1484, 1497
TasI AATT 8 cut(s) 291, 603, 654, 777, 1271, 1557, 1675, 1855
TatI WGTACW 2 cut(s) 1245, 1872
TauI GCSGC 2 cut(s) 1096, 1577
TfiI GAWTC 3 cut(s) 227, 757, 1381
TscAI CASTG 6 cut(s) 215, 268, 634, 961, 972, 1248
TseFI GTSAC 4 cut(s) 263, 307, 1015, 1080
TseI GCWGC 5 cut(s) 247, 324, 978, 1114, 1763
Tsp45I GTSAC 4 cut(s) 263, 307, 1015, 1080
TspDTI ATGAA 6 cut(s) 577, 849, 990, 1230, 1743, 1788
TspGWI ACGGA 5 cut(s) 163, 203, 1409, 1799, 1835
TspRI CASTG 6 cut(s) 215, 268, 634, 961, 972, 1248
Van91I CCANNNNNTGG 1 cut(s) 210
VneI GTGCAC 1 cut(s) 1773
VpaK11BI GGWCC 3 cut(s) 190, 889, 1165
VspI ATTAAT 3 cut(s) 713, 752, 780
XagI CCTNNNNNAGG 1 cut(s) 1346
XapI RAATTY 3 cut(s) 291, 654, 1675
XceI RCATGY 2 cut(s) 34, 271
XcmI CCANNNNNNNNNTGG 1 cut(s) 279
XhoI CTCGAG 1 cut(s) 1496
XmiI GTMKAC 2 cut(s) 138, 1287
XmnI GAANNNNTTC 2 cut(s) 567, 1596
XspI CTAG 3 cut(s) 302, 1455, 1698
Zsp2I ATGCAT 1 cut(s) 584
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.