RchiOBHm_Chr7g0211051

rRNA processing/ribosome biogenesis

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0004705
Physical Location & Seq
Reverse (-)
28387167 .. 28397501
10335 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ18884

Sequence Viewer

Length: 2490 bp
ATGTCGTCGGCCTTCGACCATGTTAAGGACATGCACGACGCCTCTCTCAAGCCTCGCTTCCTCCACACCCTCATCAGAGACCACCTCCCCGACGATAACCTCCCCTCCCGCACCTCATTCGACCTCTCCAACCTCGTCCACATGATCAAAACCCACAACCTCCTCTCCGAGTCCGTACAAGATCCCACGGACCAGAAGCTTACCACTCACTGGAGATCCGCCGTTGATTCCTGGGTCGACCGCTTGCTGCTTCTCGTTTCCAGTGACATGCCAGATAAATGCTGGGCCGGAATTTGTTTGCTAGGAGTGACTTGTCAGGAATGCAGCTCTGATCGATTCTTGGCATCATACTCTGTTTGGTACCAGAAGCTTGTATCACCTCTTCAGTCTCCGACAACTTCTCAGTTCGTGAAGGTGGCCTCTTGTGCTTCAATGTCAGATCTCCTTACAAGGTTGGGTGGATTTCCACTTGTTAAGAAAGATGGAACTGCCCATGCTGGGAAACTCATTCCATCAGTTTTGAAGTTGTTAGATGATGATCACTCGGAGGTTGTTTGGGAAGAAGCAGTTCGATTGCTATGCATATTCATATCTTTCTTTCCAATTTCCATCAGTCGTCATTATGACAGTGTTGAAGATGCTATTGCTTCAAAAATTTTGTCTGGAAAATGTAGTTTCAATATGCTGAAGAAACTTGCTCATTGCCTGGCATTAATACCAAAATCAAAAGGAGATGAGGAAAGCTGGTCATTAATGATTCAGAAGATTTTATTGTCAATTAATCGTCATCTGAATGATGTTTTCCAGGGTTTTGAGGAAGAAACTAAACGTCATGAAGGTATTAGACTTTTGGTTCCTCCTGGGAAAGACCCCCCTCCCCCCTTGGGGGACCATACATTAACAGGAGAAGCCTCAGAAGATGCAAGAAAGAGGTCTCATAGTTCACTGGTCTCCAGTGTCTCTACACTGATGATATGCTGCTCTACAATGCTAACCAGTTCATACCCTGTTCAGGTGACCGCCCCTATTCACTCCTTATTAGCCCTTATTGAGAGAGTATTGGATGTGGATGGCTCCTTGTCACGCTCCTTGCGGCTGTTTATGACTGCCATGCAGCAAGAGTTCGTTTGTTCGGAACTTCCACATTTGCACTCGTATAGTTTGGACCTCCTTACTGCAATCTTTAAGGGTGTCCGCAGTCAAGTTTTACCGCATGAAGCACATATAGTGCATTTGCTTTCAGTGTACTTAAAAAGATGTGTATTGCCAGAATTGAGGGTTAAGGTCTACTCAATCACAAAGATTTTGCTGATATCCACGGGTGTCGGAGTGGGAGTATGCCTTGCACAGGAAGTCGTGAACAGCGCTTTTGTTGACTTGAATCCCATTGTTACGGAGAATAGTAGTGCCAGCGCAAAGCCCTCAACCGAAGCATTGCTCCAAACACCACAACCTAGCAATAGAAAGAGGAAGCATGGAACTTCGATCACATCTCTCGAGGTGCATAACCCAAGTAGTTTGGAGTTGGGAACCCCCAAGAACAATACAAGATGTTCAATTTCTGTGCAAATAGCCGCACTTGAGGCATTAGAAGCTCTTCTGACTGTGGATGGTGTATTTAAATCTGAAGGATGGCGATCAGATGTTGATCTTCTTCTAATAAACATAGCTACAAATTCCTTGAAAGGGGGACTTGCTAGTGAGAACACAAGCATTTATCAGCCAAATGAACCTACTGATGTTTGGGGTGATATACAGCTTGCAGCTCTGCGTGCACTTTTGGCGTCTTTCTTGTCTTCATCTCGTGTCCGTCCCCCTTACTTAGCTCAGGGTGTTGATCTTTTCCGTAGAGGCAAGCTTGAAAGTGGTACCAAACTTGCTGAATTTTGTGCTCATGCTCTCTTAGTCTTAGAGGTGCTTATACATCCCAGGGCCCTCCCACTGGCAGATTTCTCCAATACGACTAGCATTGATGAAAGAGTTCACCACAAATACCCAGGAAATATCTACTCTGGTAGTCTAAAGCACAGAACCTCACATTCAACTGACATGCAGGGAACGGTGCATGATGCTCCTAATTTATATCACGATGAACTGTACTCAAGCTGGATTGAAACCAGTAAAGAAATGGTAGCACCCGGGAATGACCTAGGCAAGACCATGCAGATTGGAGAACCATCCAAAATTGCAGCAGTTCATGGCAATCAAATTATTTCAGCAGATGCTTCACTTAGCAAAGAAAATGAAGCCAGAAGGGAAAAGGAGATTGTAGCAGCGACCATTGACTATGTGAAGATTAGAGGAAATGGAGATGACAGTATGGTCGAACCTCTTCCTGAAGACATGGAAATGGAGCAATATCAAGGAGTTACCAATATGGTCGCAGATCCTGAGAACAGCAAGGGATTTGCATATGGGATAACTAATGATTCGGATACAGACTCAATTCCTGATATTGTGGACGTCGGTCCAGATTCTGATTCTGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RIX1

Protein Analysis

829

Amino Acids

91.2

Weight (kDa)

5.69

Isoelectric Point (pI)

37.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RIX1 PF08167 34 - 224 1.1e-34 rRNA processing/ribosome biogenesis
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2321
AatII GACGTC 1 cut(s) 2466
Acc65I GGTACC 2 cut(s) 360, 1868
AccB1I GGYRCC 2 cut(s) 360, 1868
AccB7I CCANNNNNTGG 1 cut(s) 210
AccI GTMKAC 2 cut(s) 237, 1287
AciI CCGC 8 cut(s) 109, 219, 241, 1020, 1093, 1195, 1211, 1575
AclWI GGATC 3 cut(s) 176, 210, 2381
AcsI RAATTY 4 cut(s) 291, 654, 1675, 1883
AcuI CTGAAG 4 cut(s) 368, 707, 1647, 2358
AcyI GRCGYC 3 cut(s) 39, 1784, 2463
AfaI GTAC 5 cut(s) 177, 362, 1247, 1870, 2099
AfeI AGCGCT 1 cut(s) 1366
AjnI CCWGG 6 cut(s) 230, 705, 804, 859, 1928, 1996
Alw21I GWGCWC 2 cut(s) 1777, 1894
Alw26I GTCTC 5 cut(s) 72, 393, 939, 955, 964
Alw44I GTGCAC 1 cut(s) 1773
AlwI GGATC 3 cut(s) 176, 210, 2381
AlwNI CAGNNNCTG 2 cut(s) 2390, 2477
Ama87I CYCGRG 2 cut(s) 1496, 2138
Aor51HI AGCGCT 1 cut(s) 1366
AoxI GGCC 4 cut(s) 9, 285, 417, 1932
ApaI GGGCCC 1 cut(s) 1936
ApaLI GTGCAC 1 cut(s) 1773
ApeKI GCWGC 7 cut(s) 247, 324, 978, 1114, 1763, 2189, 2273
ApoI RAATTY 4 cut(s) 291, 654, 1675, 1883
ArsI GACNNNNNNTTYG 2 cut(s) 644, 676
AseI ATTAAT 3 cut(s) 713, 752, 780
Asp700I GAANNNNTTC 4 cut(s) 567, 1596, 1980, 2331
Asp718I GGTACC 2 cut(s) 360, 1868
AspA2I CCTAGG 1 cut(s) 2149
AspLEI GCGC 2 cut(s) 1367, 1415
AspS9I GGNCC 7 cut(s) 190, 285, 889, 1165, 1932, 1933, 2468
AsuC2I CCSGG 2 cut(s) 2139, 2140
AsuHPI GGTGA 4 cut(s) 369, 1027, 1760, 1976
AvaI CYCGRG 2 cut(s) 1496, 2138
AvaII GGWCC 4 cut(s) 190, 889, 1165, 2468
AvrII CCTAGG 1 cut(s) 2149
BaeGI GKGCMC 2 cut(s) 1777, 1936
BanI GGYRCC 2 cut(s) 360, 1868
BanII GRGCYC 1 cut(s) 1936
BarI GAAGNNNNNNTAC 2 cut(s) 366, 398
BauI CACGAG 1 cut(s) 1803
BbsI GAAGAC 2 cut(s) 1788, 2346
Bbv12I GWGCWC 2 cut(s) 1777, 1894
BbvI GCAGC 7 cut(s) 234, 336, 965, 1126, 1775, 2201, 2285
BccI CCATC 7 cut(s) 476, 520, 617, 1064, 1604, 1626, 2185
BceAI ACGGC 1 cut(s) 206
BcgI CGANNNNNNTGC 4 cut(s) 100, 134, 561, 595
BciT130I CCWGG 6 cut(s) 232, 707, 806, 861, 1930, 1998
BciVI GTATCC 1 cut(s) 2428
BclI TGATCA 2 cut(s) 144, 538
BcnI CCSGG 2 cut(s) 2139, 2140
BcoDI GTCTC 5 cut(s) 72, 393, 939, 955, 964
BfaI CTAG 5 cut(s) 302, 1455, 1698, 1965, 2150
BfoI RGCGCY 1 cut(s) 1368
BfuI GTATCC 1 cut(s) 2428
BglII AGATCT 1 cut(s) 439
BisI GCNGC 9 cut(s) 248, 325, 979, 1094, 1115, 1575, 1764, 2190, 2274
BlnI CCTAGG 1 cut(s) 2149
BlsI GCNGC 9 cut(s) 249, 326, 980, 1095, 1116, 1576, 1765, 2191, 2275
Bme1390I CCNGG 8 cut(s) 232, 707, 806, 861, 1930, 1998, 2139, 2140
Bme18I GGWCC 4 cut(s) 190, 889, 1165, 2468
BmeT110I CYCGRG 2 cut(s) 1496, 2138
BmgT120I GGNCC 7 cut(s) 190, 285, 889, 1165, 1932, 1933, 2468
BmiI GGNNCC 7 cut(s) 362, 855, 890, 1075, 1531, 1870, 1934
BmrFI CCNGG 8 cut(s) 232, 707, 806, 861, 1930, 1998, 2139, 2140
BmsI GCATC 5 cut(s) 353, 628, 910, 2059, 2212
BoxI GACNNNNGTC 1 cut(s) 2466
BpiI GAAGAC 2 cut(s) 1788, 2346
BplI GAGNNNNNCTC 2 cut(s) 69, 101
BpmI CTGGAG 2 cut(s) 232, 937
Bpu10I CCTNAGC 1 cut(s) 1827
BpuEI CTTGAG 3 cut(s) 32, 1601, 2086
BpuMI CCSGG 2 cut(s) 2139, 2140
Bsa29I ATCGAT 1 cut(s) 334
BsaBI GATNNNNATC 3 cut(s) 537, 1636, 1647
BsaHI GRCGYC 3 cut(s) 39, 1784, 2463
BsaI GGTCTC 3 cut(s) 72, 939, 955
BsaXI ACNNNNNCTCC 6 cut(s) 89, 119, 149, 179, 1320, 1350
Bse1I ACTGG 7 cut(s) 215, 261, 951, 954, 996, 1947, 2118
Bse3DI GCAATG 2 cut(s) 700, 1433
Bse8I GATNNNNATC 3 cut(s) 537, 1636, 1647
BseBI CCWGG 6 cut(s) 232, 707, 806, 861, 1930, 1998
BseCI ATCGAT 1 cut(s) 334
BseGI GGATG 6 cut(s) 1069, 1075, 1615, 1637, 1924, 2177
BseJI GATNNNNATC 3 cut(s) 537, 1636, 1647
BseMI GCAATG 2 cut(s) 700, 1433
BseMII CTCAG 4 cut(s) 416, 927, 1841, 2382
BseNI ACTGG 7 cut(s) 215, 261, 951, 954, 996, 1947, 2118
BseRI GAGGAG 1 cut(s) 152
BseSI GKGCMC 2 cut(s) 1777, 1936
BseXI GCAGC 7 cut(s) 234, 336, 965, 1126, 1775, 2201, 2285
BseYI CCCAGC 2 cut(s) 282, 497
Bsh1285I CGRYCG 1 cut(s) 241
BshFI GGCC 4 cut(s) 11, 287, 419, 1934
BshNI GGYRCC 2 cut(s) 360, 1868
BshVI ATCGAT 1 cut(s) 334
BsiEI CGRYCG 1 cut(s) 241
BsiHKAI GWGCWC 2 cut(s) 1777, 1894
BsiHKCI CYCGRG 2 cut(s) 1496, 2138
BsiSI CCGG 2 cut(s) 288, 2139
BslFI GGGAC 3 cut(s) 902, 1704, 1797
BsmAI GTCTC 5 cut(s) 72, 393, 939, 955, 964
BsmFI GGGAC 3 cut(s) 902, 1704, 1797
BsmI GAATGC 1 cut(s) 326
BsnI GGCC 4 cut(s) 11, 287, 419, 1934
Bso31I GGTCTC 3 cut(s) 72, 939, 955
BsoBI CYCGRG 2 cut(s) 1496, 2138
Bsp120I GGGCCC 1 cut(s) 1932
Bsp1286I GDGCHC 3 cut(s) 1777, 1894, 1936
BspACI CCGC 8 cut(s) 109, 219, 241, 1020, 1093, 1195, 1211, 1575
BspANI GGCC 4 cut(s) 11, 287, 419, 1934
BspCNI CTCAG 4 cut(s) 415, 926, 1840, 2383
BspDI ATCGAT 1 cut(s) 334
BspHI TCATGA 1 cut(s) 832
BspLI GGNNCC 7 cut(s) 362, 855, 890, 1075, 1531, 1870, 1934
BspPI GGATC 3 cut(s) 176, 210, 2381
BspQI GCTCTTC 1 cut(s) 1602
BspT107I GGYRCC 2 cut(s) 360, 1868
BspTNI GGTCTC 3 cut(s) 72, 939, 955
BsrDI GCAATG 2 cut(s) 700, 1433
BsrI ACTGG 7 cut(s) 215, 261, 951, 954, 996, 1947, 2118
BssNI GRCGYC 3 cut(s) 39, 1784, 2463
BssSI CACGAG 1 cut(s) 1803
BssT1I CCWWGG 2 cut(s) 882, 2149
Bst2BI CACGAG 1 cut(s) 1803
Bst2UI CCWGG 6 cut(s) 232, 707, 806, 861, 1930, 1998
Bst4CI ACNGT 5 cut(s) 629, 1606, 2062, 2097, 2318
Bst6I CTCTTC 3 cut(s) 387, 1602, 2337
BstACI GRCGYC 3 cut(s) 39, 1784, 2463
BstC8I GCNNGC 5 cut(s) 245, 1411, 1761, 1773, 1856
BstDEI CTNAG 8 cut(s) 402, 913, 1822, 1827, 1903, 1909, 2231, 2391
BstDSI CCRYGG 2 cut(s) 186, 1317
BstEII GGTNACC 1 cut(s) 1015
BstENI CCTNNNNNAGG 1 cut(s) 1346
BstF5I GGATG 6 cut(s) 1069, 1075, 1615, 1637, 1924, 2177
BstH2I RGCGCY 1 cut(s) 1368
BstHHI GCGC 2 cut(s) 1367, 1415
BstMAI GTCTC 5 cut(s) 72, 393, 939, 955, 964
BstMCI CGRYCG 1 cut(s) 241
BstMWI GCNNNNNNNGC 5 cut(s) 425, 1583, 1592, 1772, 1781
BstNI CCWGG 6 cut(s) 232, 707, 806, 861, 1930, 1998
BstNSI RCATGY 3 cut(s) 34, 271, 2053
BstPAI GACNNNNGTC 1 cut(s) 2466
BstPI GGTNACC 1 cut(s) 1015
BstSCI CCNGG 8 cut(s) 230, 705, 804, 859, 1928, 1996, 2137, 2138
BstSLI GKGCMC 2 cut(s) 1777, 1936
BstV1I GCAGC 7 cut(s) 234, 336, 965, 1126, 1775, 2201, 2285
BstV2I GAAGAC 2 cut(s) 1788, 2346
BstX2I RGATCY 4 cut(s) 181, 215, 439, 2386
BstYI RGATCY 4 cut(s) 181, 215, 439, 2386
Bsu15I ATCGAT 1 cut(s) 334
BsuI GTATCC 1 cut(s) 2428
BsuRI GGCC 4 cut(s) 11, 287, 419, 1934
BsuTUI ATCGAT 1 cut(s) 334
BtgI CCRYGG 2 cut(s) 186, 1317
BtsCI GGATG 6 cut(s) 1069, 1075, 1615, 1637, 1924, 2177
BtsIMutI CAGTG 8 cut(s) 208, 268, 634, 944, 961, 965, 1248, 1940
Cac8I GCNNGC 5 cut(s) 245, 1411, 1761, 1773, 1856
CaiI CAGNNNCTG 2 cut(s) 2390, 2477
CciI TCATGA 1 cut(s) 832
CfoI GCGC 2 cut(s) 1367, 1415
Cfr13I GGNCC 7 cut(s) 190, 285, 889, 1165, 1932, 1933, 2468
Cfr9I CCCGGG 1 cut(s) 2138
ClaI ATCGAT 1 cut(s) 334
CseI GACGC 2 cut(s) 47, 1773
Csp6I GTAC 5 cut(s) 176, 361, 1246, 1869, 2098
CviQI GTAC 5 cut(s) 176, 361, 1246, 1869, 2098
DdeI CTNAG 8 cut(s) 402, 913, 1822, 1827, 1903, 1909, 2231, 2391
DraI TTTAAA 1 cut(s) 1621
DrdI GACNNNNNNGTC 1 cut(s) 2321
DseDI GACNNNNNNGTC 1 cut(s) 2321
Eam1104I CTCTTC 3 cut(s) 387, 1602, 2337
EarI CTCTTC 3 cut(s) 387, 1602, 2337
EciI GGCGGA 1 cut(s) 208
Eco130I CCWWGG 2 cut(s) 882, 2149
Eco24I GRGCYC 1 cut(s) 1936
Eco31I GGTCTC 3 cut(s) 72, 939, 955
Eco32I GATATC 1 cut(s) 1314
Eco47I GGWCC 4 cut(s) 190, 889, 1165, 2468
Eco47III AGCGCT 1 cut(s) 1366
Eco57I CTGAAG 4 cut(s) 368, 707, 1647, 2358
Eco88I CYCGRG 2 cut(s) 1496, 2138
Eco91I GGTNACC 1 cut(s) 1015
EcoNI CCTNNNNNAGG 1 cut(s) 1346
EcoO109I RGGNCCY 2 cut(s) 1932, 1933
EcoO65I GGTNACC 1 cut(s) 1015
EcoRII CCWGG 6 cut(s) 230, 705, 804, 859, 1928, 1996
EcoRV GATATC 1 cut(s) 1314
EcoT14I CCWWGG 2 cut(s) 882, 2149
EcoT22I ATGCAT 1 cut(s) 584
EcoT38I GRGCYC 1 cut(s) 1936
ErhI CCWWGG 2 cut(s) 882, 2149
FalI AAGNNNNNCTT 4 cut(s) 41, 73, 1677, 1709
FaqI GGGAC 3 cut(s) 902, 1704, 1797
FauI CCCGC 1 cut(s) 116
FauNDI CATATG 1 cut(s) 2413
FbaI TGATCA 2 cut(s) 144, 538
FblI GTMKAC 2 cut(s) 237, 1287
Fnu4HI GCNGC 9 cut(s) 248, 325, 979, 1094, 1115, 1575, 1764, 2190, 2274
FokI GGATG 6 cut(s) 1076, 1082, 1622, 1644, 1911, 2164
FriOI GRGCYC 1 cut(s) 1936
Fsp4HI GCNGC 9 cut(s) 248, 325, 979, 1094, 1115, 1575, 1764, 2190, 2274
FspBI CTAG 5 cut(s) 302, 1455, 1698, 1965, 2150
GlaI GCGC 2 cut(s) 1366, 1414
GluI GCNGC 9 cut(s) 248, 325, 979, 1094, 1115, 1575, 1764, 2190, 2274
GsaI CCCAGC 2 cut(s) 286, 501
GsuI CTGGAG 2 cut(s) 232, 937
HaeII RGCGCY 1 cut(s) 1368
HaeIII GGCC 4 cut(s) 11, 287, 419, 1934
HapII CCGG 2 cut(s) 288, 2139
HgaI GACGC 2 cut(s) 47, 1773
HhaI GCGC 2 cut(s) 1367, 1415
Hin1I GRCGYC 3 cut(s) 39, 1784, 2463
Hin6I GCGC 2 cut(s) 1365, 1413
HinP1I GCGC 2 cut(s) 1365, 1413
HincII GTYRAC 2 cut(s) 238, 1375
HindII GTYRAC 2 cut(s) 238, 1375
HindIII AAGCTT 3 cut(s) 197, 368, 1856
HinfI GANTC 9 cut(s) 170, 227, 336, 757, 1381, 2429, 2441, 2474, 2480
HpaII CCGG 2 cut(s) 288, 2139
HphI GGTGA 4 cut(s) 369, 1027, 1760, 1976
Hpy99I CGWCG 4 cut(s) 10, 41, 95, 2468
HpyAV CCTTC 5 cut(s) 22, 406, 830, 1622, 2247
HpyCH4III ACNGT 5 cut(s) 629, 1606, 2062, 2097, 2318
HpyCH4IV ACGT 2 cut(s) 829, 2463
HpyF10VI GCNNNNNNNGC 5 cut(s) 425, 1583, 1592, 1772, 1781
HpyF3I CTNAG 8 cut(s) 402, 913, 1822, 1827, 1903, 1909, 2231, 2391
HpySE526I ACGT 2 cut(s) 829, 2463
Hsp92I GRCGYC 3 cut(s) 39, 1784, 2463
HspAI GCGC 2 cut(s) 1365, 1413
KpnI GGTACC 2 cut(s) 364, 1872
Ksp22I TGATCA 2 cut(s) 144, 538
LguI GCTCTTC 1 cut(s) 1602
LmnI GCTCC 5 cut(s) 1079, 1091, 1443, 2077, 2353
Lsp1109I GCAGC 7 cut(s) 234, 336, 965, 1126, 1775, 2201, 2285
LweI GCATC 5 cut(s) 353, 628, 910, 2059, 2212
MaeI CTAG 5 cut(s) 302, 1455, 1698, 1965, 2150
MaeII ACGT 2 cut(s) 829, 2463
MaeIII GTNAC 6 cut(s) 263, 307, 1015, 1080, 1390, 2368
MflI RGATCY 4 cut(s) 181, 215, 439, 2386
MhlI GDGCHC 3 cut(s) 1777, 1894, 1936
MlyI GAGTC 2 cut(s) 179, 2435
MmeI TCCRAC 3 cut(s) 153, 416, 1306
Mph1103I ATGCAT 1 cut(s) 584
MroXI GAANNNNTTC 4 cut(s) 567, 1596, 1980, 2331
MslI CAYNNNNRTG 2 cut(s) 792, 2348
MspI CCGG 2 cut(s) 288, 2139
MspR9I CCNGG 8 cut(s) 232, 707, 806, 861, 1930, 1998, 2139, 2140
Mva1269I GAATGC 1 cut(s) 326
MvaI CCWGG 6 cut(s) 232, 707, 806, 861, 1930, 1998
MwoI GCNNNNNNNGC 5 cut(s) 425, 1583, 1592, 1772, 1781
NciI CCSGG 2 cut(s) 2139, 2140
NdeI CATATG 1 cut(s) 2413
NlaIV GGNNCC 7 cut(s) 362, 855, 890, 1075, 1531, 1870, 1934
NmuCI GTSAC 4 cut(s) 263, 307, 1015, 1080
NsiI ATGCAT 1 cut(s) 584
NspI RCATGY 3 cut(s) 34, 271, 2053
PaeR7I CTCGAG 1 cut(s) 1496
PagI TCATGA 1 cut(s) 832
PasI CCCWGGG 1 cut(s) 1929
PciSI GCTCTTC 1 cut(s) 1602
PctI GAATGC 1 cut(s) 326
PdmI GAANNNNTTC 4 cut(s) 567, 1596, 1980, 2331
PfeI GAWTC 7 cut(s) 227, 336, 757, 1381, 2429, 2474, 2480
PflMI CCANNNNNTGG 1 cut(s) 210
PkrI GCNGC 9 cut(s) 249, 326, 980, 1095, 1116, 1576, 1765, 2191, 2275
PleI GAGTC 2 cut(s) 178, 2435
PpsI GAGTC 2 cut(s) 178, 2435
PshAI GACNNNNGTC 1 cut(s) 2466
PshBI ATTAAT 3 cut(s) 713, 752, 780
Psp6I CCWGG 6 cut(s) 230, 705, 804, 859, 1928, 1996
PspEI GGTNACC 1 cut(s) 1015
PspFI CCCAGC 2 cut(s) 282, 497
PspGI CCWGG 6 cut(s) 230, 705, 804, 859, 1928, 1996
PspN4I GGNNCC 7 cut(s) 362, 855, 890, 1075, 1531, 1870, 1934
PspOMI GGGCCC 1 cut(s) 1932
PspPI GGNCC 7 cut(s) 190, 285, 889, 1165, 1932, 1933, 2468
PstNI CAGNNNCTG 2 cut(s) 2390, 2477
PsuI RGATCY 4 cut(s) 181, 215, 439, 2386
RsaI GTAC 5 cut(s) 177, 362, 1247, 1870, 2099
RsaNI GTAC 5 cut(s) 176, 361, 1246, 1869, 2098
RseI CAYNNNNRTG 2 cut(s) 792, 2348
SalI GTCGAC 1 cut(s) 236
SapI GCTCTTC 1 cut(s) 1602
SatI GCNGC 9 cut(s) 248, 325, 979, 1094, 1115, 1575, 1764, 2190, 2274
Sau96I GGNCC 7 cut(s) 190, 285, 889, 1165, 1932, 1933, 2468
SchI GAGTC 2 cut(s) 179, 2435
ScrFI CCNGG 8 cut(s) 232, 707, 806, 861, 1930, 1998, 2139, 2140
SduI GDGCHC 3 cut(s) 1777, 1894, 1936
SfaNI GCATC 5 cut(s) 353, 628, 910, 2059, 2212
Sfr274I CTCGAG 1 cut(s) 1496
SinI GGWCC 4 cut(s) 190, 889, 1165, 2468
SlaI CTCGAG 1 cut(s) 1496
SmaI CCCGGG 1 cut(s) 2140
SmiI ATTTAAAT 1 cut(s) 1621
SmiMI CAYNNNNRTG 2 cut(s) 792, 2348
SmlI CTYRAG 4 cut(s) 47, 1496, 1580, 2101
SmoI CTYRAG 4 cut(s) 47, 1496, 1580, 2101
SsiI CCGC 8 cut(s) 109, 219, 241, 1020, 1093, 1195, 1211, 1575
SspMI CTAG 5 cut(s) 302, 1455, 1698, 1965, 2150
StyD4I CCNGG 8 cut(s) 230, 705, 804, 859, 1928, 1996, 2137, 2138
StyI CCWWGG 2 cut(s) 882, 2149
SwaI ATTTAAAT 1 cut(s) 1621
TaaI ACNGT 5 cut(s) 629, 1606, 2062, 2097, 2318
TaiI ACGT 2 cut(s) 832, 2466
TaqI TCGA 8 cut(s) 15, 120, 237, 334, 571, 1484, 1497, 2325
TaqII GACCGA 1 cut(s) 2456
TatI WGTACW 2 cut(s) 1245, 2097
TauI GCSGC 2 cut(s) 1096, 1577
TfiI GAWTC 7 cut(s) 227, 336, 757, 1381, 2429, 2474, 2480
TscAI CASTG 8 cut(s) 215, 268, 634, 951, 961, 972, 1248, 1947
TseFI GTSAC 4 cut(s) 263, 307, 1015, 1080
TseI GCWGC 7 cut(s) 247, 324, 978, 1114, 1763, 2189, 2273
Tsp45I GTSAC 4 cut(s) 263, 307, 1015, 1080
TspGWI ACGGA 5 cut(s) 163, 203, 1409, 1799, 1835
TspMI CCCGGG 1 cut(s) 2138
TspRI CASTG 8 cut(s) 215, 268, 634, 951, 961, 972, 1248, 1947
Van91I CCANNNNNTGG 1 cut(s) 210
VneI GTGCAC 1 cut(s) 1773
VpaK11BI GGWCC 4 cut(s) 190, 889, 1165, 2468
VspI ATTAAT 3 cut(s) 713, 752, 780
XagI CCTNNNNNAGG 1 cut(s) 1346
XapI RAATTY 4 cut(s) 291, 654, 1675, 1883
XceI RCATGY 3 cut(s) 34, 271, 2053
XcmI CCANNNNNNNNNTGG 2 cut(s) 279, 2125
XhoI CTCGAG 1 cut(s) 1496
XmaI CCCGGG 1 cut(s) 2138
XmaJI CCTAGG 1 cut(s) 2149
XmiI GTMKAC 2 cut(s) 237, 1287
XmnI GAANNNNTTC 4 cut(s) 567, 1596, 1980, 2331
XspI CTAG 5 cut(s) 302, 1455, 1698, 1965, 2150
ZraI GACGTC 1 cut(s) 2464
Zsp2I ATGCAT 1 cut(s) 584
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.