Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002491

Physical Location & Seq

Genomic Coordinates Forward (+)

11423906 .. 11426818

Gene Structure 2913 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G31840.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2523 bp

ATGTTACTTTTTTCTTCATCGTCTTTGCAATTACGCGAGATTTTCTTCCCGCGGATTTTCTCTGTGTTCGTGAAGCTGAACTTTCTGAACTCTCGTGGGTTTTCGTCTGATTCTGCTAAAGCCCTCGCCGCCGGTATCTCTAAAGCAATCAAAGAAGGAAACTTTAACTTGTTAGATTCTTCTGTCTACGGTTCAAATTTGCAACGAAACGAGACGAATTTGGTCCTTCTTTCGCTTGAATCAGAACCCAATTCTGCGCTTAAGTACTTTCGATGGGCAGAGATCTCTGGAAAGGATCCTTCTTTCTATACCATTGCTCATGTTTTGATCCGAAATGGGATGTTCGATGTTGCAGATAAGGTGTTCGATGAAATGATCACCAATCGTGGGAAGGATTTCAACGTTCTGGGTTCGATTAGGGATAGGTCATTGGATGCTGATGTTTGCAAGTTTTTGATGGAATGTTGTTGTAGATATGGTATGGTTGATAAGGCTCTGGAGATATTTGTGTATAGTACTCAATTGGGTGTAGTTATACCGCAGGATTCTGTATATAGGATGCTAAATTCTTTGATTGGTTCTGATCGTGTTGACTTAATAGCTGATCATTTTGATAAACTATGTAGAGGAGGAATTGAGCCTTCAGGTGTGAGTGCTCATGGATTTGTGTTGGATGCTCTTTTCTGCAAAGGAGAGGTTACAAAGGCTTTAGATTTTCATCGACTAGTGATGGAGAGAGGTTTTCGTGTTGGTATAGTTTCTTGCAATAAGGTTTTGAAGGGTCTTTCAGTTGATCAGATTGAGGTAGCTTCTCGGTTGTTAAGTTTGGTTTTGGATTGTGGTCCGGCACCTAATGTGGTGACTTTTTGCACGTTGATTAATGGGTTTTGCAAAAGAGGTGAAATGGATAGAGCATTCGATCTTTTTAAAGTTATGGAACAGAGAGGGATAGAGCCAGACTTGATCGCTTACAGTACTCTGATTGATGGATACTTCAAAGCAGGGATGTTAGGAATGGGTCATAAGCTTTTCTCGCAGGCCTTACATAAAGGTGTGAAGTTGGACGTGGTTGTGTTCAGTTCAACGATTGATGTATATGTAAAATCTGGGGATTTAGCAACAGCTTCTGTTGTGTACAAGAGAATGTTGTGTCAAGGGATTTCCCCTAATGTGGTTACTTACACCATTCTCATAAAAGGCTTGTGCCAGGATGGTAGGATTTACGAAGCTTTTGGTATGTATGGTCAGATCTTGAAACGTGGTATGGAGCCATCTATTGTAACTTATAGCAGTCTCATTGATGGTTTTTGCAAGTGTGGGAACTTGAGATCCGGGTTTGCTTTATATGAGGATATGATAAAGATGGGTTATCCACCTGATGTTGTCATTTATGGTGTGCTTGTTGATGGCCTTTCTAAGCAAGGGCTCATGCTCCATGCTATGAGATTCTCTGTTAAGATGCTAGGCCAGTCGATCCGGCTCAATGTTGTAGTTTTTAATTCCTTAATAGATGGCTGGTGTAGGTTAAATCGTTTTGACGAGGCTTTGAAGGTGTTTAGATTAATGGGGATATATGGTATAAAACCTGATGTAGCCACATTCACCACGGTTATGAGGGTGAGTATCATGGAAGGTAGATTAGAAGAAGCATTATTTCTGTTTTTCCGGATGTTCAAAATGGGTTTGGAACCTGATGCCTTAGCATACTGTACCCTAATAGATGCATTCTGCAAGCATATGAAGCCAACCATTGGGCTTCAGCTGTTTGATCTTATGCAGAGGAATAAAATCTCTGCAGATATTGCGGTATGTAATGTCGTCATTCATTTGCTTTTCAAATGTCACCGCATAGAGGATGCTTCTAAGTTCTTCAATAATCTTATTGAAGGAAAGATGGAGCCTGATATTGTGACATATAACACAATGATATGTGGCTACTGCTCTTTGAGAAGGTTAGATGAAGCAGAGAGGATTTTCGAGCTGCTAAAAGTTACACCTTTTGGTCCCAATACCGTTACTTTGACTATACTTATCCATGTACTCTGCAAAAATAATGATATGGATGGTGCTATAAGGATGTTCTCCATAATGGCGGAAAAGGGCTCTAAACCGAATGCTGTCACATACGGTTGTCTAATGGATTGGTTTTCAAAATCCGTCGATATCGAAGGTTCTTTCAAGCTTTTTGAGGAAATGCAAGAGAAAGGTATTTCTCCAAGCATAGTAAGTTATAGCATCATAATTGACGGTCTTTGCAAACGAGGAAGAGTGGATGAAGCAACAAATATCTTCCATCAGGCCATAGATGCAAAGTTATTGCCTGATGTTGTTGCCTACGCAATTCTTATCCGTGGTTATTGCAAGGTTGGAAGACTCGTTGAAGCTGCATTGTTGTATGAACATATGTTAAGAAACGGAGTCAAACCAGATGATTTGCTTCAACGAGCCCTTTCAGAATATAATCCCCCAAAGTGGTTGATGAGCAAAGGGGTCTGGGTACACGATAAACCGATGCCTGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

840

Amino Acids

94.17

Weight (kDa)

7.87

Isoelectric Point (pI)

26.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_1	PF12854	281 - 313	5.9e-13	PPR repeat
PPR_3	PF13812	283 - 330	3.8e-07	Pentatricopeptide repeat domain
PPR_2	PF13041	284 - 333	2.6e-17	PPR repeat family
TPR_24	PF23276	286 - 382	9.6e-06	Fungal tetratrico peptide repeats
PPR	PF01535	287 - 317	3.2e-08	PPR repeat
PPR_2	PF13041	319 - 364	2.1e-06	PPR repeat family
PPR_long	PF17177	342 - 454	2.8e-06	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	343 - 399	5.7e-09	Pentatricopeptide repeat domain
PPR_2	PF13041	355 - 403	1.9e-13	PPR repeat family
PPR_1	PF12854	386 - 413	1.2e-10	PPR repeat
PPR	PF01535	392 - 421	6e-06	PPR repeat
PPR_2	PF13041	398 - 438	1.7e-10	PPR repeat family
PPR_1	PF12854	420 - 452	3.2e-10	PPR repeat
PPR_2	PF13041	424 - 473	1.5e-12	PPR repeat family
PPR	PF01535	427 - 456	2e-07	PPR repeat
PPR_1	PF12854	492 - 522	6e-09	PPR repeat
PPR_2	PF13041	495 - 539	3.6e-12	PPR repeat family
PPR	PF01535	497 - 524	5e-06	PPR repeat
PPR_3	PF13812	518 - 577	8.1e-06	Pentatricopeptide repeat domain
PPR_2	PF13041	544 - 578	5.3e-06	PPR repeat family
PPR_2	PF13041	600 - 647	1.4e-11	PPR repeat family
PPR_1	PF12854	632 - 660	2.9e-10	PPR repeat
PPR_2	PF13041	634 - 682	7.9e-13	PPR repeat family
PPR	PF01535	637 - 663	6.4e-07	PPR repeat
PPR_2	PF13041	669 - 718	1.6e-13	PPR repeat family
PPR_1	PF12854	669 - 697	1.4e-07	PPR repeat
TPR_24	PF23276	673 - 766	6.1e-07	Fungal tetratrico peptide repeats
PPR_long	PF17177	680 - 811	6.1e-09	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	704 - 753	1.1e-15	PPR repeat family
PPR_1	PF12854	735 - 766	5.1e-11	PPR repeat
PPR_2	PF13041	739 - 785	2.8e-10	PPR repeat family
PPR_1	PF12854	772 - 802	1.7e-07	PPR repeat
PPR_2	PF13041	774 - 811	1.6e-09	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0002491)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31840 AT1G31840
malus_domestica	MD12G1033400.v1.1
prunus_persica	Prupe.1G555500_v2.0.a1 Prupe.1G555500_v2.0.a1 Prupe.1G555500_v2.0.a1 Prupe.1G555500_v2.0.a1 Prupe.1G555500_v2.0.a1 Prupe.1G555500_v2.0.a1 Prupe.1G555500_v2.0.a1 Prupe.1G555500_v2.0.a1 Prupe.1G569400_v2.0.a1 Prupe.1G569400_v2.0.a1 Prupe.1G569400_v2.0.a1 Prupe.1G569400_v2.0.a1 Prupe.1G569400_v2.0.a1 Prupe.1G569400_v2.0.a1
pyrus_communis	pycom12g03070
rosa_chinensis	RchiOBHm_Chr2g0139321 RchiOBHm_Chr7g0227311
rosa_laevigata	RLG00000001660
rosa_multiflora	Rmu_sc0001246.1_g000012 Rmu_sc0002525.1_g000013 Rmu_sc0003153.1_g000006 Rmu_sc0011922.1_g000005
rosa_roxburghii	Rroxscaffold_3G00232240
rosa_rugosa	Rorug07G0241200
rosa_samantha	Rh2BG417100 Rh7AG391100 Rh7AG391600 Rh7AG392200 Rh7AG392500 Rh7BG376100 Rh7CG192200 Rh7CG410100 Rh7CG410500 Rh7CG411300 Rh7CG411800 Rh7DG388700
rosa_wichuraiana	Rw7G032710 Rw7G032740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	847
AccB7I	CCANNNNNTGG	1 cut(s)	1751
AccI	GTMKAC	1 cut(s)	186
AccII	CGCG	2 cut(s)	36, 52
AccIII	TCCGGA	1 cut(s)	1665
AciI	CCGC	7 cut(s)	50, 52, 129, 539, 1805, 1846, 2093
AclI	AACGTT	1 cut(s)	402
AclWI	GGATC	5 cut(s)	290, 303, 322, 1323, 1468
AcsI	RAATTY	3 cut(s)	196, 217, 565
AcuI	CTGAAG	2 cut(s)	627, 1742
AfaI	GTAC	7 cut(s)	266, 517, 976, 1136, 1711, 2040, 2499
AfiI	CCNNNNNNNGG	5 cut(s)	387, 1171, 1751, 1852, 2472
AflII	CTTAAG	1 cut(s)	260
AhlI	ACTAGT	1 cut(s)	724
AjiI	CACGTC	1 cut(s)	1066
AjnI	CCWGG	1 cut(s)	1206
AloI	GAACNNNNNNTCC	2 cut(s)	1313, 1345
Alw21I	GWGCWC	1 cut(s)	658
Alw26I	GTCTC	2 cut(s)	206, 1298
AlwI	GGATC	5 cut(s)	290, 303, 322, 1323, 1468
AlwNI	CAGNNNCTG	1 cut(s)	1127
Aor13HI	TCCGGA	1 cut(s)	1665
AoxI	GGCC	4 cut(s)	1038, 1408, 1465, 2298
ApeKI	GCWGC	2 cut(s)	1981, 2384
ApoI	RAATTY	3 cut(s)	196, 217, 565
AseI	ATTAAT	2 cut(s)	879, 1562
Asp700I	GAANNNNTTC	1 cut(s)	395
AspLEI	GCGC	1 cut(s)	259
AspS9I	GGNCC	3 cut(s)	223, 842, 2003
AsuC2I	CCSGG	1 cut(s)	1333
AsuHPI	GGTGA	6 cut(s)	370, 871, 911, 1594, 1630, 1835
AvaII	GGWCC	3 cut(s)	223, 842, 2003
BamHI	GGATCC	1 cut(s)	295
BanI	GGYRCC	1 cut(s)	847
BanII	GRGCYC	3 cut(s)	1428, 2105, 2449
BauI	CACGAG	1 cut(s)	93
BbsI	GAAGAC	1 cut(s)	2377
Bbv12I	GWGCWC	1 cut(s)	658
BbvI	GCAGC	2 cut(s)	1968, 2371
BciT130I	CCWGG	1 cut(s)	1208
BciVI	GTATCC	1 cut(s)	983
BclI	TGATCA	3 cut(s)	375, 604, 793
BcnI	CCSGG	1 cut(s)	1333
BcoDI	GTCTC	2 cut(s)	206, 1298
BcuI	ACTAGT	1 cut(s)	724
BfaI	CTAG	2 cut(s)	725, 1463
BfmI	CTRYAG	1 cut(s)	1794
BfrI	CTTAAG	1 cut(s)	260
BfuI	GTATCC	1 cut(s)	983
BglII	AGATCT	2 cut(s)	282, 1248
BisI	GCNGC	3 cut(s)	129, 1982, 2385
BlsI	GCNGC	3 cut(s)	130, 1983, 2386
BmcAI	AGTACT	3 cut(s)	266, 517, 976
Bme1390I	CCNGG	2 cut(s)	1208, 1333
Bme18I	GGWCC	3 cut(s)	223, 842, 2003
BmgBI	CACGTC	1 cut(s)	1066
BmgT120I	GGNCC	3 cut(s)	223, 842, 2003
BmiI	GGNNCC	6 cut(s)	297, 849, 1269, 1689, 1899, 2005
BmrFI	CCNGG	2 cut(s)	1208, 1333
BpiI	GAAGAC	1 cut(s)	2377
BpmI	CTGGAG	1 cut(s)	518
Bpu10I	CCTNAGC	1 cut(s)	1699
BpuEI	CTTGAG	1 cut(s)	1345
BpuMI	CCSGG	1 cut(s)	1333
BsaBI	GATNNNNATC	1 cut(s)	717
BsaJI	CCNNGG	3 cut(s)	50, 1605, 2350
BsaWI	WCCGGW	1 cut(s)	1665
Bsc4I	CCNNNNNNNGG	5 cut(s)	387, 1171, 1751, 1852, 2472
Bse118I	RCCGGY	1 cut(s)	131
Bse1I	ACTGG	1 cut(s)	1468
Bse3DI	GCAATG	1 cut(s)	312
Bse8I	GATNNNNATC	1 cut(s)	717
BseAI	TCCGGA	1 cut(s)	1665
BseBI	CCWGG	1 cut(s)	1208
BseDI	CCNNGG	3 cut(s)	50, 1605, 2350
BseJI	GATNNNNATC	1 cut(s)	717
BseLI	CCNNNNNNNGG	5 cut(s)	387, 1171, 1751, 1852, 2472
BseMI	GCAATG	1 cut(s)	312
BseNI	ACTGG	1 cut(s)	1468
BseRI	GAGGAG	1 cut(s)	642
BseXI	GCAGC	2 cut(s)	1968, 2371
Bsh1236I	CGCG	2 cut(s)	36, 52
BshFI	GGCC	4 cut(s)	1040, 1410, 1467, 2300
BshNI	GGYRCC	1 cut(s)	847
BsiHKAI	GWGCWC	1 cut(s)	658
BsiSI	CCGG	5 cut(s)	132, 845, 1332, 1477, 1666
BslFI	GGGAC	1 cut(s)	1989
BslI	CCNNNNNNNGG	5 cut(s)	387, 1171, 1751, 1852, 2472
BsmAI	GTCTC	2 cut(s)	206, 1298
BsmBI	CGTCTC	1 cut(s)	206
BsmFI	GGGAC	1 cut(s)	1989
BsmI	GAATGC	3 cut(s)	914, 1724, 2119
BsnI	GGCC	4 cut(s)	1040, 1410, 1467, 2300
Bsp1286I	GDGCHC	4 cut(s)	658, 1428, 2105, 2449
Bsp13I	TCCGGA	1 cut(s)	1665
Bsp1407I	TGTACA	1 cut(s)	1134
BspACI	CCGC	7 cut(s)	50, 52, 129, 539, 1805, 1846, 2093
BspANI	GGCC	4 cut(s)	1040, 1410, 1467, 2300
BspEI	TCCGGA	1 cut(s)	1665
BspFNI	CGCG	2 cut(s)	36, 52
BspLI	GGNNCC	6 cut(s)	297, 849, 1269, 1689, 1899, 2005
BspMAI	CTGCAG	1 cut(s)	1798
BspPI	GGATC	5 cut(s)	290, 303, 322, 1323, 1468
BspT107I	GGYRCC	1 cut(s)	847
BspTI	CTTAAG	1 cut(s)	260
BsrDI	GCAATG	1 cut(s)	312
BsrFI	RCCGGY	1 cut(s)	131
BsrGI	TGTACA	1 cut(s)	1134
BsrI	ACTGG	1 cut(s)	1468
BssAI	RCCGGY	1 cut(s)	131
BssECI	CCNNGG	3 cut(s)	50, 1605, 2350
BssSI	CACGAG	1 cut(s)	93
Bst2BI	CACGAG	1 cut(s)	93
Bst2UI	CCWGG	1 cut(s)	1208
Bst4CI	ACNGT	7 cut(s)	191, 974, 1609, 1709, 2014, 2129, 2249
Bst6I	CTCTTC	1 cut(s)	2260
BstAFI	CTTAAG	1 cut(s)	260
BstAPI	GCANNNNNTGC	1 cut(s)	1802
BstAUI	TGTACA	1 cut(s)	1134
BstC8I	GCNNGC	2 cut(s)	1038, 1733
BstDEI	CTNAG	3 cut(s)	1416, 1699, 1863
BstDSI	CCRYGG	3 cut(s)	50, 1605, 2350
BstFNI	CGCG	2 cut(s)	36, 52
BstHHI	GCGC	1 cut(s)	259
BstMAI	GTCTC	2 cut(s)	206, 1298
BstMWI	GCNNNNNNNGC	5 cut(s)	128, 1033, 1741, 1802, 2306
BstNI	CCWGG	1 cut(s)	1208
BstSCI	CCNGG	2 cut(s)	1206, 1331
BstSFI	CTRYAG	1 cut(s)	1794
BstUI	CGCG	2 cut(s)	36, 52
BstV1I	GCAGC	2 cut(s)	1968, 2371
BstV2I	GAAGAC	1 cut(s)	2377
BstX2I	RGATCY	4 cut(s)	282, 295, 1248, 1328
BstYI	RGATCY	4 cut(s)	282, 295, 1248, 1328
BsuI	GTATCC	1 cut(s)	983
BsuRI	GGCC	4 cut(s)	1040, 1410, 1467, 2300
BtgI	CCRYGG	3 cut(s)	50, 1605, 2350
BtrI	CACGTC	1 cut(s)	1066
Cac8I	GCNNGC	2 cut(s)	1038, 1733
CaiI	CAGNNNCTG	1 cut(s)	1127
CfoI	GCGC	1 cut(s)	259
Cfr10I	RCCGGY	1 cut(s)	131
Cfr13I	GGNCC	3 cut(s)	223, 842, 2003
Cfr42I	CCGCGG	1 cut(s)	53
Csp6I	GTAC	7 cut(s)	265, 516, 975, 1135, 1710, 2039, 2498
CviAII	CATG	6 cut(s)	320, 659, 1429, 1436, 1627, 2036
CviQI	GTAC	7 cut(s)	265, 516, 975, 1135, 1710, 2039, 2498
DdeI	CTNAG	3 cut(s)	1416, 1699, 1863
DraI	TTTAAA	1 cut(s)	928
Eam1104I	CTCTTC	1 cut(s)	2260
EarI	CTCTTC	1 cut(s)	2260
EciI	GGCGGA	1 cut(s)	2108
Eco147I	AGGCCT	1 cut(s)	1040
Eco24I	GRGCYC	3 cut(s)	1428, 2105, 2449
Eco32I	GATATC	1 cut(s)	2164
Eco47I	GGWCC	3 cut(s)	223, 842, 2003
Eco57I	CTGAAG	2 cut(s)	627, 1742
EcoRII	CCWGG	1 cut(s)	1206
EcoRV	GATATC	1 cut(s)	2164
EcoT22I	ATGCAT	1 cut(s)	1726
EcoT38I	GRGCYC	3 cut(s)	1428, 2105, 2449
Esp3I	CGTCTC	1 cut(s)	206
FaeI	CATG	6 cut(s)	323, 662, 1432, 1439, 1630, 2039
FalI	AAGNNNNNCTT	2 cut(s)	65, 97
FaqI	GGGAC	1 cut(s)	1989
FatI	CATG	6 cut(s)	319, 658, 1428, 1435, 1626, 2035
FauI	CCCGC	1 cut(s)	57
FauNDI	CATATG	2 cut(s)	1737, 2403
FbaI	TGATCA	3 cut(s)	375, 604, 793
FblI	GTMKAC	1 cut(s)	186
Fnu4HI	GCNGC	3 cut(s)	129, 1982, 2385
FriOI	GRGCYC	3 cut(s)	1428, 2105, 2449
Fsp4HI	GCNGC	3 cut(s)	129, 1982, 2385
FspBI	CTAG	2 cut(s)	725, 1463
GlaI	GCGC	1 cut(s)	258
GluI	GCNGC	3 cut(s)	129, 1982, 2385
GsuI	CTGGAG	1 cut(s)	518
HaeIII	GGCC	4 cut(s)	1040, 1410, 1467, 2300
HapII	CCGG	5 cut(s)	132, 845, 1332, 1477, 1666
HhaI	GCGC	1 cut(s)	259
Hin1II	CATG	6 cut(s)	323, 662, 1432, 1439, 1630, 2039
Hin6I	GCGC	1 cut(s)	257
HinP1I	GCGC	1 cut(s)	257
HincII	GTYRAC	1 cut(s)	592
HindII	GTYRAC	1 cut(s)	592
HindIII	AAGCTT	3 cut(s)	1025, 1227, 2180
HinfI	GANTC	7 cut(s)	110, 176, 239, 545, 1446, 2373, 2418
HpaII	CCGG	5 cut(s)	132, 845, 1332, 1477, 1666
HphI	GGTGA	6 cut(s)	370, 871, 911, 1594, 1630, 1835
Hpy166II	GTNNAC	4 cut(s)	187, 592, 1135, 2500
Hpy188I	TCNGA	9 cut(s)	87, 109, 244, 332, 583, 798, 981, 1248, 2455
Hpy188III	TCNNGA	5 cut(s)	70, 288, 497, 1252, 1666
Hpy8I	GTNNAC	4 cut(s)	187, 592, 1135, 2500
Hpy99I	CGWCG	1 cut(s)	2162
HpyCH4III	ACNGT	7 cut(s)	191, 974, 1609, 1709, 2014, 2129, 2249
HpyCH4IV	ACGT	4 cut(s)	402, 872, 1065, 1258
HpyF10VI	GCNNNNNNNGC	5 cut(s)	128, 1033, 1741, 1802, 2306
HpyF3I	CTNAG	3 cut(s)	1416, 1699, 1863
HpySE526I	ACGT	4 cut(s)	402, 872, 1065, 1258
Hsp92II	CATG	6 cut(s)	323, 662, 1432, 1439, 1630, 2039
HspAI	GCGC	1 cut(s)	257
Kpn2I	TCCGGA	1 cut(s)	1665
Ksp22I	TGATCA	3 cut(s)	375, 604, 793
KspI	CCGCGG	1 cut(s)	53
LmnI	GCTCC	3 cut(s)	1267, 1437, 1897
Lsp1109I	GCAGC	2 cut(s)	1968, 2371
MaeI	CTAG	2 cut(s)	725, 1463
MaeII	ACGT	4 cut(s)	402, 872, 1065, 1258
MboII	GAAGA	8 cut(s)	6, 37, 171, 1655, 1861, 2277, 2281, 2382
MfeI	CAATTG	1 cut(s)	521
MflI	RGATCY	4 cut(s)	282, 295, 1248, 1328
MhlI	GDGCHC	4 cut(s)	658, 1428, 2105, 2449
MlyI	GAGTC	2 cut(s)	2367, 2427
MmeI	TCCRAC	3 cut(s)	651, 1041, 2347
Mph1103I	ATGCAT	1 cut(s)	1726
MroI	TCCGGA	1 cut(s)	1665
MroXI	GAANNNNTTC	1 cut(s)	395
MslI	CAYNNNNRTG	2 cut(s)	1050, 1610
MspA1I	CMGCKG	2 cut(s)	52, 1762
MspCI	CTTAAG	1 cut(s)	260
MspI	CCGG	5 cut(s)	132, 845, 1332, 1477, 1666
MspR9I	CCNGG	2 cut(s)	1208, 1333
MunI	CAATTG	1 cut(s)	521
Mva1269I	GAATGC	3 cut(s)	914, 1724, 2119
MvaI	CCWGG	1 cut(s)	1208
MvnI	CGCG	2 cut(s)	36, 52
MwoI	GCNNNNNNNGC	5 cut(s)	128, 1033, 1741, 1802, 2306
NciI	CCSGG	1 cut(s)	1333
NdeI	CATATG	2 cut(s)	1737, 2403
NlaIII	CATG	6 cut(s)	323, 662, 1432, 1439, 1630, 2039
NlaIV	GGNNCC	6 cut(s)	297, 849, 1269, 1689, 1899, 2005
NmuCI	GTSAC	4 cut(s)	859, 1841, 1909, 2119
NsiI	ATGCAT	1 cut(s)	1726
PceI	AGGCCT	1 cut(s)	1040
PctI	GAATGC	3 cut(s)	914, 1724, 2119
PdmI	GAANNNNTTC	1 cut(s)	395
PfeI	GAWTC	5 cut(s)	110, 176, 239, 545, 1446
PflMI	CCANNNNNTGG	1 cut(s)	1751
PkrI	GCNGC	3 cut(s)	130, 1983, 2386
PleI	GAGTC	2 cut(s)	2367, 2426
PpsI	GAGTC	2 cut(s)	2367, 2426
PshBI	ATTAAT	2 cut(s)	879, 1562
Psp1406I	AACGTT	1 cut(s)	402
Psp6I	CCWGG	1 cut(s)	1206
PspGI	CCWGG	1 cut(s)	1206
PspN4I	GGNNCC	6 cut(s)	297, 849, 1269, 1689, 1899, 2005
PspPI	GGNCC	3 cut(s)	223, 842, 2003
PstI	CTGCAG	1 cut(s)	1798
PstNI	CAGNNNCTG	1 cut(s)	1127
PsuI	RGATCY	4 cut(s)	282, 295, 1248, 1328
PvuII	CAGCTG	1 cut(s)	1762
RsaI	GTAC	7 cut(s)	266, 517, 976, 1136, 1711, 2040, 2499
RsaNI	GTAC	7 cut(s)	265, 516, 975, 1135, 1710, 2039, 2498
RseI	CAYNNNNRTG	2 cut(s)	1050, 1610
SacII	CCGCGG	1 cut(s)	53
SatI	GCNGC	3 cut(s)	129, 1982, 2385
Sau96I	GGNCC	3 cut(s)	223, 842, 2003
ScaI	AGTACT	3 cut(s)	266, 517, 976
SchI	GAGTC	2 cut(s)	2367, 2427
ScrFI	CCNGG	2 cut(s)	1208, 1333
SduI	GDGCHC	4 cut(s)	658, 1428, 2105, 2449
SfcI	CTRYAG	1 cut(s)	1794
Sfr303I	CCGCGG	1 cut(s)	53
SgrBI	CCGCGG	1 cut(s)	53
SinI	GGWCC	3 cut(s)	223, 842, 2003
SmiMI	CAYNNNNRTG	2 cut(s)	1050, 1610
SmlI	CTYRAG	2 cut(s)	260, 1324
SmoI	CTYRAG	2 cut(s)	260, 1324
SpeI	ACTAGT	1 cut(s)	724
SseBI	AGGCCT	1 cut(s)	1040
SsiI	CCGC	7 cut(s)	50, 52, 129, 539, 1805, 1846, 2093
SspMI	CTAG	2 cut(s)	725, 1463
StuI	AGGCCT	1 cut(s)	1040
StyD4I	CCNGG	2 cut(s)	1206, 1331
TaaI	ACNGT	7 cut(s)	191, 974, 1609, 1709, 2014, 2129, 2249
TaiI	ACGT	4 cut(s)	405, 875, 1068, 1261
TatI	WGTACW	5 cut(s)	264, 515, 974, 1134, 2038
TauI	GCSGC	1 cut(s)	131
TfiI	GAWTC	5 cut(s)	110, 176, 239, 545, 1446
TseFI	GTSAC	4 cut(s)	859, 1841, 1909, 2119
TseI	GCWGC	2 cut(s)	1981, 2384
Tsp45I	GTSAC	4 cut(s)	859, 1841, 1909, 2119
TspDTI	ATGAA	8 cut(s)	6, 384, 707, 1754, 1814, 1974, 2289, 2412
TspGWI	ACGGA	3 cut(s)	2146, 2339, 2430
Van91I	CCANNNNNTGG	1 cut(s)	1751
Vha464I	CTTAAG	1 cut(s)	260
VpaK11BI	GGWCC	3 cut(s)	223, 842, 2003
VspI	ATTAAT	2 cut(s)	879, 1562
XapI	RAATTY	3 cut(s)	196, 217, 565
XmiI	GTMKAC	1 cut(s)	186
XmnI	GAANNNNTTC	1 cut(s)	395
XspI	CTAG	2 cut(s)	725, 1463
ZrmI	AGTACT	3 cut(s)	266, 517, 976
Zsp2I	ATGCAT	1 cut(s)	1726

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.