pentatricopeptide repeat-containing protein At1g31840
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G31840 AT1G31840 |
| malus_domestica | MD12G1033400.v1.1 |
| prunus_persica | Prupe.1G555500_v2.0.a1 Prupe.1G555500_v2.0.a1 Prupe.1G555500_v2.0.a1 Prupe.1G555500_v2.0.a1 Prupe.1G555500_v2.0.a1 Prupe.1G555500_v2.0.a1 Prupe.1G555500_v2.0.a1 Prupe.1G555500_v2.0.a1 Prupe.1G569400_v2.0.a1 Prupe.1G569400_v2.0.a1 Prupe.1G569400_v2.0.a1 Prupe.1G569400_v2.0.a1 Prupe.1G569400_v2.0.a1 Prupe.1G569400_v2.0.a1 |
| pyrus_communis | pycom12g03070 |
| rosa_chinensis | RchiOBHm_Chr2g0139321 RchiOBHm_Chr7g0227311 |
| rosa_laevigata | RLG00000001660 |
| rosa_multiflora | Rmu_sc0001246.1_g000012 Rmu_sc0002525.1_g000013 Rmu_sc0003153.1_g000006 Rmu_sc0011922.1_g000005 |
| rosa_roxburghii | Rroxscaffold_3G00232240 |
| rosa_rugosa | Rorug07G0241200 |
| rosa_samantha | Rh2BG417100 Rh7AG391100 Rh7AG391600 Rh7AG392200 Rh7AG392500 Rh7BG376100 Rh7CG192200 Rh7CG410100 Rh7CG410500 Rh7CG411300 Rh7CG411800 Rh7DG388700 |
| rosa_wichuraiana | Rw7G032710 Rw7G032740 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 5 cut(s) | 52, 73, 106, 201, 340 |
| AfaI | GTAC | 3 cut(s) | 6, 19, 234 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 121 |
| AflIII | ACRYGT | 1 cut(s) | 235 |
| AgsI | TTSAA | 3 cut(s) | 72, 329, 340 |
| AluBI | AGCT | 1 cut(s) | 63 |
| AluI | AGCT | 1 cut(s) | 63 |
| ApeKI | GCWGC | 1 cut(s) | 393 |
| ApoI | RAATTY | 5 cut(s) | 52, 73, 106, 201, 340 |
| AsuHPI | GGTGA | 1 cut(s) | 332 |
| BbvI | GCAGC | 1 cut(s) | 405 |
| BccI | CCATC | 2 cut(s) | 352, 382 |
| BisI | GCNGC | 1 cut(s) | 394 |
| BlsI | GCNGC | 1 cut(s) | 395 |
| BsaBI | GATNNNNATC | 1 cut(s) | 225 |
| BsaJI | CCNNGG | 1 cut(s) | 397 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 121 |
| Bse8I | GATNNNNATC | 1 cut(s) | 225 |
| BseDI | CCNNGG | 1 cut(s) | 397 |
| BseJI | GATNNNNATC | 1 cut(s) | 225 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 121 |
| BseXI | GCAGC | 1 cut(s) | 405 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 121 |
| Bsp1407I | TGTACA | 1 cut(s) | 232 |
| Bsp19I | CCATGG | 1 cut(s) | 397 |
| BsrGI | TGTACA | 1 cut(s) | 232 |
| BssECI | CCNNGG | 1 cut(s) | 397 |
| BssT1I | CCWWGG | 1 cut(s) | 397 |
| Bst4CI | ACNGT | 1 cut(s) | 68 |
| Bst6I | CTCTTC | 1 cut(s) | 405 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 170 |
| BstAUI | TGTACA | 1 cut(s) | 232 |
| BstDSI | CCRYGG | 1 cut(s) | 397 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 143, 170 |
| BstNSI | RCATGY | 1 cut(s) | 239 |
| BstV1I | GCAGC | 1 cut(s) | 405 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 404 |
| BtgI | CCRYGG | 1 cut(s) | 397 |
| BtsI | GCAGTG | 1 cut(s) | 360 |
| BtsIMutI | CAGTG | 1 cut(s) | 360 |
| Csp6I | GTAC | 3 cut(s) | 5, 18, 233 |
| CviAII | CATG | 2 cut(s) | 236, 398 |
| CviJI | RGCY | 3 cut(s) | 63, 307, 396 |
| CviKI_1 | RGCY | 3 cut(s) | 63, 307, 396 |
| CviQI | GTAC | 3 cut(s) | 5, 18, 233 |
| Eam1104I | CTCTTC | 1 cut(s) | 405 |
| EarI | CTCTTC | 1 cut(s) | 405 |
| Eco130I | CCWWGG | 1 cut(s) | 397 |
| EcoT14I | CCWWGG | 1 cut(s) | 397 |
| ErhI | CCWWGG | 1 cut(s) | 397 |
| FaeI | CATG | 2 cut(s) | 239, 401 |
| FaiI | YATR | 7 cut(s) | 84, 158, 237, 253, 255, 299, 399 |
| FatI | CATG | 2 cut(s) | 235, 397 |
| Fnu4HI | GCNGC | 1 cut(s) | 394 |
| Fsp4HI | GCNGC | 1 cut(s) | 394 |
| GluI | GCNGC | 1 cut(s) | 394 |
| Hin1II | CATG | 2 cut(s) | 239, 401 |
| HinfI | GANTC | 4 cut(s) | 131, 226, 241, 383 |
| HphI | GGTGA | 1 cut(s) | 332 |
| Hpy166II | GTNNAC | 3 cut(s) | 233, 269, 286 |
| Hpy188I | TCNGA | 1 cut(s) | 99 |
| Hpy188III | TCNNGA | 1 cut(s) | 245 |
| Hpy8I | GTNNAC | 3 cut(s) | 233, 269, 286 |
| HpyCH4III | ACNGT | 1 cut(s) | 68 |
| HpyCH4V | TGCA | 1 cut(s) | 164 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 143, 170 |
| Hsp92II | CATG | 2 cut(s) | 239, 401 |
| Lsp1109I | GCAGC | 1 cut(s) | 405 |
| MboII | GAAGA | 4 cut(s) | 422, 428, 431, 434 |
| MluCI | AATT | 9 cut(s) | 11, 23, 52, 73, 106, 201, 260, 340, 439 |
| MlyI | GAGTC | 1 cut(s) | 392 |
| MmeI | TCCRAC | 1 cut(s) | 108 |
| MnlI | CCTC | 5 cut(s) | 136, 359, 406, 423, 426 |
| MseI | TTAA | 1 cut(s) | 27 |
| MslI | CAYNNNNRTG | 1 cut(s) | 402 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 143, 170 |
| NcoI | CCATGG | 1 cut(s) | 397 |
| NlaIII | CATG | 2 cut(s) | 239, 401 |
| NspI | RCATGY | 1 cut(s) | 239 |
| PciI | ACATGT | 1 cut(s) | 235 |
| PfeI | GAWTC | 3 cut(s) | 131, 226, 241 |
| PkrI | GCNGC | 1 cut(s) | 395 |
| PleI | GAGTC | 1 cut(s) | 391 |
| PpsI | GAGTC | 1 cut(s) | 391 |
| PscI | ACATGT | 1 cut(s) | 235 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 52, 84 |
| RsaI | GTAC | 3 cut(s) | 6, 19, 234 |
| RsaNI | GTAC | 3 cut(s) | 5, 18, 233 |
| RseI | CAYNNNNRTG | 1 cut(s) | 402 |
| SaqAI | TTAA | 1 cut(s) | 27 |
| SatI | GCNGC | 1 cut(s) | 394 |
| SchI | GAGTC | 1 cut(s) | 392 |
| SetI | ASST | 4 cut(s) | 65, 277, 322, 370 |
| SgeI | CNNG | 9 cut(s) | 225, 242, 248, 257, 284, 301, 315, 389, 410 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 402 |
| Sse9I | AATT | 9 cut(s) | 11, 23, 52, 73, 106, 201, 260, 340, 439 |
| StyI | CCWWGG | 1 cut(s) | 397 |
| TaaI | ACNGT | 1 cut(s) | 68 |
| TaqI | TCGA | 1 cut(s) | 386 |
| TasI | AATT | 9 cut(s) | 11, 23, 52, 73, 106, 201, 260, 340, 439 |
| TatI | WGTACW | 1 cut(s) | 232 |
| TfiI | GAWTC | 3 cut(s) | 131, 226, 241 |
| Tru1I | TTAA | 1 cut(s) | 27 |
| Tru9I | TTAA | 1 cut(s) | 27 |
| TscAI | CASTG | 1 cut(s) | 360 |
| TseI | GCWGC | 1 cut(s) | 393 |
| TspDTI | ATGAA | 1 cut(s) | 335 |
| TspRI | CASTG | 1 cut(s) | 360 |
| XapI | RAATTY | 5 cut(s) | 52, 73, 106, 201, 340 |
| XceI | RCATGY | 1 cut(s) | 239 |