Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0009233

Physical Location & Seq

Genomic Coordinates Reverse (-)

12120886 .. 12123576

Gene Structure 2691 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G33420.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2094 bp

ATGGCGGTGATGAACGGTGGTCGTGCGACGAAGCGAGCGAGGCGTAGCAACAGAATCTCAGCTGATCTTTACGATTTCTCTACTTTCCCGACGGCGGAGATCAACGGCGAGTCGACGACTTTGCCGCCGTTCCGAGACGGTGTGAGAACCTTCCTCGCGACCCACGCGCGTGTCACTTTCCCTCCTTCGACGCTCTTCTCGAGTTTGATGACGTGGCAGATCATGCTTAGACCTGGAGATTCGACGGACGGTTCAGATCTCTCTTCTAAACTCGTCTCTCTCGACGTTGTGGAGGAGGATGTGACGAGATCCTCTAGATCTGTTTACTGTGAACACTGCTGTGTCGTTGGTTGGAGTAGTCATCCAGTGTGTAGAAAGAGGTACCGCTTCATCATAAGGTCAGGAGGAGACACTAAGGCTTGCACGAGGTGTGGTAATACTCAGAATTTGTCTGAAGGTAGCAATTGCAAATGGTGCAGCATGGCTTTAGACATTGAAAACTGGGTTTACTCTCAGCTAGAGGATAACACTCACCTCCTTCACGGCGTTATCCACTCTAATGGCTACGCTCATCTACTGTGTCTTAATGGAAGAGAAGGTGGCTCTGGTTTTTTGACTGGTCGTGCCATTATGGACTTCTGGGATAGGCTTTGTTCCTCCCTTGCTGTTCGAAAAGCTAGTGTGATGGATGTGTCAAGGAAGTATGGGATGGACTACCGGTTGCTTCATGGGATTACTAGAGGGTGTTCGTGGTACAGTGAGTGGGGTTATGAATTCAAATCGGGGAGCTATGCACTCACCAAAGAAGCTTACCAGAGTGCAGTGGATACTTTATCTGCGATTCCTCTCTCTGAGTTTTTGTTCCAGGGGAGGAAACCAAGAACTCAGCTCCACTCCATTATTAGCTTCTACCAATCACTCTCGTGTTCAGAGCTTGTGACTGTCAAAGACCTCTTCTCCTTTCTCCTACAGATGATTCGTGAGAACAGTTCCAAACCTGCATCTAAGTCGTCTGTACTGTGTGCTTGGTCTAAAAGTGATGTGGAACGTGTACAGCAAACCATGGTTAAGATACTGAAAGCTTCAGGACGCCCACAAGCCAACTGGGTTACAAGGTGGGCTCTCAAGAGGTCTATTTGCAAATCAGCCTCTCCACAACTGATTGATTACTGTCTCAAGCATTTTGGAGGGGTTTTGGTGGATGATGGATCTCGAGTAGTCAGCTCACGTTGCAATCCTGGTTCAAACGACTTTGAGTACAGGCTTGAATCTGTCAACAATGTGCACCGCTTATCTAATCAAGATGTAAATAATGCATCAGTGGAGCATGTCAAACAGGATTTAAGATATTTGTATGAAACTTTATTGCACCCACAAACCATGGCCGAGTTTAGGTCTCGAGCTACAAGAGAAAAAATGATTGACGCAGCCACAAAAATACTGGACTGTAAGCATTTCATAAAAGATTACCTGTCTAGCACAGTGAACCCCGTTGCAATCAACCTCTGGTGCTGTGTTGAGCTTTCGGATGAACTCAAAGAATCCCCAGCCCCTCCACCTGAACGGTTGGTTTTGCCATTGAACGCTACTGTTTCCGACCTTAAAATCGAAGCTGCTAAGGCTTTTCAGGAAGTGTATGCAATGTTCAAGAGGTTTGAAGTTGAGGAGCTCCTAGGTTACGGTTCTATAGATGACTCTATTACCCTGAAATTTCTAGTTGGCACAAACGGGGTCATACGGATTAAAGGGAGATGCTCAAAACACGGGCTCCTTAGATACCGCATGGAGAGAGGGGTGGATAATTGGAAAGTTGATTGCAAGTGTGGCACAAAGGATGATGATGGCGAGAGGATGTTGGCCTGTGATGGATGTGGTGTGTGGCACCACACTAGATGTATTGGGATCAATAACGCTGATGCCCTACCTTCCAAGTTCCTTTGTTTCAGATGCATTGAGTTGTACAGCAAGAAACCAAAGCAATCTAAAAAAGAGCGTGGATCTAGTCAAGTGCCCAAAGCTGGCTTTGTTTGTAGAGGTGAGTCAGCTGCTATGGGCAGTGGATCTAATTTATCCGTAACACTTAGAGTAGGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PHD

Protein Analysis

697

Amino Acids

78.09

Weight (kDa)

8.9

Isoelectric Point (pI)

35.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WHD_plant_repro	PF25874	343 - 424	1.1e-12	Winged helix-turn-helix domain in plant reproductive proteins
Ubiquitin_At1g33420	PF25565	497 - 585	3.2e-30	At1g33420-like, ubiquitin-like domain
PHD	PF00628	606 - 650	5.8e-08	PHD-finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009233)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G33420 AT1G33420
fragaria_vesca	FvH4_2g00220 FvH4_2g00220
malus_domestica	MD05G1001000.v1.1 MD10G1001100.v1.1 MD10G1001300.v1.1
prunus_persica	Prupe.8G002100_v2.0.a1
pyrus_communis	pycom05g00030 pycom10g00120
rosa_chinensis	RchiOBHm_Chr6g0249511
rosa_laevigata	RLG00000015574
rosa_multiflora	Rmu_co8352193.1_g000001 Rmu_sc0022339.1_g000001 Rmu_ssc0000407.1_g000008
rosa_roxburghii	Rroxscaffold_7G00217610
rosa_rugosa	Rorug05G0493100
rosa_samantha	Rh6AG002800 Rh6BG007300 Rh6CG001800 Rh6DG001800
rosa_wichuraiana	Rw6G000320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1006
Acc65I	GGTACC	1 cut(s)	381
AccB1I	GGYRCC	2 cut(s)	381, 1881
AccI	GTMKAC	1 cut(s)	113
AccII	CGCG	3 cut(s)	158, 167, 169
AciI	CCGC	6 cut(s)	5, 95, 125, 385, 1288, 1780
AclWI	GGATC	5 cut(s)	303, 1216, 1910, 2005, 2068
AcoI	YGGCCR	1 cut(s)	1383
AcsI	RAATTY	3 cut(s)	445, 773, 1709
AcuI	CTGAAG	2 cut(s)	474, 1068
AcyI	GRCGYC	1 cut(s)	1090
AdeI	CACNNNGTG	1 cut(s)	429
AfaI	GTAC	6 cut(s)	383, 755, 1017, 1053, 1259, 1961
AfiI	CCNNNNNNNGG	3 cut(s)	94, 1392, 2018
AflIII	ACRYGT	1 cut(s)	1048
AgeI	ACCGGT	1 cut(s)	717
AgsI	TTSAA	7 cut(s)	497, 778, 1245, 1268, 1582, 1648, 1658
AjiI	CACGTC	1 cut(s)	213
AjnI	CCWGG	3 cut(s)	232, 864, 1237
AleI	CACNNNNGTG	3 cut(s)	168, 339, 922
Alw21I	GWGCWC	2 cut(s)	1287, 1671
Alw26I	GTCTC	5 cut(s)	129, 280, 402, 1178, 1401
Alw44I	GTGCAC	1 cut(s)	1283
AlwI	GGATC	5 cut(s)	303, 1216, 1910, 2005, 2068
Ama87I	CYCGRG	3 cut(s)	199, 1212, 1398
AoxI	GGCC	2 cut(s)	1383, 1857
ApaLI	GTGCAC	1 cut(s)	1283
ApeKI	GCWGC	4 cut(s)	477, 1427, 1613, 2045
ApoI	RAATTY	3 cut(s)	445, 773, 1709
AsiGI	ACCGGT	1 cut(s)	717
Asp718I	GGTACC	1 cut(s)	381
AspA2I	CCTAGG	1 cut(s)	1672
AspLEI	GCGC	1 cut(s)	169
AsuHPI	GGTGA	4 cut(s)	19, 524, 790, 2048
AsuII	TTCGAA	1 cut(s)	670
AvaI	CYCGRG	3 cut(s)	199, 1212, 1398
AvrII	CCTAGG	1 cut(s)	1672
BaeGI	GKGCMC	2 cut(s)	1287, 2013
BanI	GGYRCC	2 cut(s)	381, 1881
BanII	GRGCYC	3 cut(s)	1123, 1671, 1770
BauI	CACGAG	2 cut(s)	424, 922
Bbv12I	GWGCWC	2 cut(s)	1287, 1671
BbvI	GCAGC	4 cut(s)	489, 1439, 1600, 2032
BccI	CCATC	5 cut(s)	679, 703, 1199, 1835, 1859
BceAI	ACGGC	4 cut(s)	108, 112, 121, 559
BcgI	CGANNNNNNTGC	4 cut(s)	103, 137, 990, 1024
BciT130I	CCWGG	3 cut(s)	234, 866, 1239
BciVI	GTATCC	1 cut(s)	820
BcoDI	GTCTC	5 cut(s)	129, 280, 402, 1178, 1401
BfaI	CTAG	9 cut(s)	315, 518, 678, 738, 1476, 1673, 1715, 1890, 2001
BfmI	CTRYAG	2 cut(s)	968, 1686
BfuAI	ACCTGC	1 cut(s)	1006
BfuI	GTATCC	1 cut(s)	820
BglII	AGATCT	2 cut(s)	256, 317
BisI	GCNGC	5 cut(s)	125, 478, 1428, 1614, 2046
BlnI	CCTAGG	1 cut(s)	1672
BlsI	GCNGC	5 cut(s)	126, 479, 1429, 1615, 2047
Bme1390I	CCNGG	3 cut(s)	234, 866, 1239
BmeT110I	CYCGRG	3 cut(s)	199, 1212, 1398
BmgBI	CACGTC	1 cut(s)	213
BmiI	GGNNCC	3 cut(s)	383, 1769, 1883
BmrFI	CCNGG	3 cut(s)	234, 866, 1239
BmrI	ACTGGG	2 cut(s)	511, 1114
BmsI	GCATC	5 cut(s)	1010, 1325, 1742, 1906, 1937
BmuI	ACTGGG	2 cut(s)	511, 1114
BpmI	CTGGAG	1 cut(s)	255
Bpu10I	CCTNAGC	1 cut(s)	1617
Bpu14I	TTCGAA	1 cut(s)	670
BpuEI	CTTGAG	2 cut(s)	1109, 1160
BsaHI	GRCGYC	1 cut(s)	1090
BsaI	GGTCTC	1 cut(s)	1401
BsaJI	CCNNGG	4 cut(s)	865, 1062, 1380, 1672
BsaWI	WCCGGW	1 cut(s)	717
BsaXI	ACNNNNNCTCC	6 cut(s)	166, 196, 941, 971, 1752, 1782
Bsc4I	CCNNNNNNNGG	3 cut(s)	94, 1392, 2018
Bse118I	RCCGGY	1 cut(s)	717
Bse1I	ACTGG	5 cut(s)	365, 506, 622, 1109, 1446
Bse3DI	GCAATG	1 cut(s)	1647
BseBI	CCWGG	3 cut(s)	234, 866, 1239
BseDI	CCNNGG	4 cut(s)	865, 1062, 1380, 1672
BseGI	GGATG	9 cut(s)	304, 361, 694, 714, 1207, 1534, 1840, 1857, 1874
BseLI	CCNNNNNNNGG	3 cut(s)	94, 1392, 2018
BseMI	GCAATG	1 cut(s)	1647
BseMII	CTCAG	5 cut(s)	72, 455, 527, 843, 899
BseNI	ACTGG	5 cut(s)	365, 506, 622, 1109, 1446
BseRI	GAGGAG	3 cut(s)	308, 420, 1679
BseSI	GKGCMC	2 cut(s)	1287, 2013
BseXI	GCAGC	4 cut(s)	489, 1439, 1600, 2032
BseYI	CCCAGC	1 cut(s)	1546
BsgI	GTGCAG	2 cut(s)	496, 840
Bsh1236I	CGCG	3 cut(s)	158, 167, 169
BshFI	GGCC	2 cut(s)	1385, 1859
BshNI	GGYRCC	2 cut(s)	381, 1881
BshTI	ACCGGT	1 cut(s)	717
BsiHKAI	GWGCWC	2 cut(s)	1287, 1671
BsiHKCI	CYCGRG	3 cut(s)	199, 1212, 1398
BsiSI	CCGG	1 cut(s)	718
BslI	CCNNNNNNNGG	3 cut(s)	94, 1392, 2018
BsmAI	GTCTC	5 cut(s)	129, 280, 402, 1178, 1401
BsmBI	CGTCTC	2 cut(s)	129, 280
BsnI	GGCC	2 cut(s)	1385, 1859
Bso31I	GGTCTC	1 cut(s)	1401
BsoBI	CYCGRG	3 cut(s)	199, 1212, 1398
Bsp119I	TTCGAA	1 cut(s)	670
Bsp1286I	GDGCHC	5 cut(s)	1123, 1287, 1671, 1770, 2013
Bsp1407I	TGTACA	2 cut(s)	1051, 1959
Bsp19I	CCATGG	2 cut(s)	1062, 1380
Bsp68I	TCGCGA	1 cut(s)	158
BspACI	CCGC	6 cut(s)	5, 95, 125, 385, 1288, 1780
BspANI	GGCC	2 cut(s)	1385, 1859
BspCNI	CTCAG	5 cut(s)	71, 454, 526, 844, 898
BspFNI	CGCG	3 cut(s)	158, 167, 169
BspLI	GGNNCC	3 cut(s)	383, 1769, 1883
BspMI	ACCTGC	1 cut(s)	1006
BspPI	GGATC	5 cut(s)	303, 1216, 1910, 2005, 2068
BspQI	GCTCTTC	1 cut(s)	200
BspT104I	TTCGAA	1 cut(s)	670
BspT107I	GGYRCC	2 cut(s)	381, 1881
BspTNI	GGTCTC	1 cut(s)	1401
BsrDI	GCAATG	1 cut(s)	1647
BsrFI	RCCGGY	1 cut(s)	717
BsrGI	TGTACA	2 cut(s)	1051, 1959
BsrI	ACTGG	5 cut(s)	365, 506, 622, 1109, 1446
BssAI	RCCGGY	1 cut(s)	717
BssECI	CCNNGG	4 cut(s)	865, 1062, 1380, 1672
BssNI	GRCGYC	1 cut(s)	1090
BssSI	CACGAG	2 cut(s)	424, 922
BssT1I	CCWWGG	3 cut(s)	1062, 1380, 1672
Bst2BI	CACGAG	2 cut(s)	424, 922
Bst2UI	CCWGG	3 cut(s)	234, 866, 1239
Bst6I	CTCTTC	4 cut(s)	200, 268, 586, 959
BstACI	GRCGYC	1 cut(s)	1090
BstAPI	GCANNNNNTGC	2 cut(s)	223, 474
BstAUI	TGTACA	2 cut(s)	1051, 1959
BstBI	TTCGAA	1 cut(s)	670
BstC8I	GCNNGC	3 cut(s)	36, 421, 2020
BstDSI	CCRYGG	2 cut(s)	1062, 1380
BstF5I	GGATG	9 cut(s)	304, 361, 694, 714, 1207, 1534, 1840, 1857, 1874
BstFNI	CGCG	3 cut(s)	158, 167, 169
BstHHI	GCGC	1 cut(s)	169
BstMAI	GTCTC	5 cut(s)	129, 280, 402, 1178, 1401
BstMWI	GCNNNNNNNGC	7 cut(s)	40, 164, 223, 474, 1230, 1619, 1824
BstNI	CCWGG	3 cut(s)	234, 866, 1239
BstNSI	RCATGY	1 cut(s)	1331
BstSCI	CCNGG	3 cut(s)	232, 864, 1237
BstSFI	CTRYAG	2 cut(s)	968, 1686
BstSLI	GKGCMC	2 cut(s)	1287, 2013
BstUI	CGCG	3 cut(s)	158, 167, 169
BstV1I	GCAGC	4 cut(s)	489, 1439, 1600, 2032
BstX2I	RGATCY	6 cut(s)	256, 308, 317, 1208, 1997, 2060
BstXI	CCANNNNNNTGG	1 cut(s)	560
BstYI	RGATCY	6 cut(s)	256, 308, 317, 1208, 1997, 2060
BsuI	GTATCC	1 cut(s)	820
BsuRI	GGCC	2 cut(s)	1385, 1859
BtgI	CCRYGG	2 cut(s)	1062, 1380
BtrI	CACGTC	1 cut(s)	213
BtsCI	GGATG	9 cut(s)	304, 361, 694, 714, 1207, 1534, 1840, 1857, 1874
BtsI	GCAGTG	3 cut(s)	334, 828, 2062
BtsIMutI	CAGTG	7 cut(s)	334, 372, 763, 828, 1326, 1488, 2062
BtuMI	TCGCGA	1 cut(s)	158
BveI	ACCTGC	1 cut(s)	1006
Cac8I	GCNNGC	3 cut(s)	36, 421, 2020
CfoI	GCGC	1 cut(s)	169
Cfr10I	RCCGGY	1 cut(s)	717
CseI	GACGC	3 cut(s)	199, 1098, 1433
Csp6I	GTAC	6 cut(s)	382, 754, 1016, 1052, 1258, 1960
CspAI	ACCGGT	1 cut(s)	717
CviAII	CATG	7 cut(s)	223, 481, 728, 1063, 1328, 1381, 1783
CviQI	GTAC	6 cut(s)	382, 754, 1016, 1052, 1258, 1960
DraIII	CACNNNGTG	1 cut(s)	429
EaeI	YGGCCR	1 cut(s)	1383
Eam1104I	CTCTTC	4 cut(s)	200, 268, 586, 959
EarI	CTCTTC	4 cut(s)	200, 268, 586, 959
EciI	GGCGGA	1 cut(s)	110
Ecl136II	GAGCTC	1 cut(s)	1669
Eco130I	CCWWGG	3 cut(s)	1062, 1380, 1672
Eco24I	GRGCYC	3 cut(s)	1123, 1671, 1770
Eco31I	GGTCTC	1 cut(s)	1401
Eco53kI	GAGCTC	1 cut(s)	1669
Eco57I	CTGAAG	2 cut(s)	474, 1068
Eco88I	CYCGRG	3 cut(s)	199, 1212, 1398
EcoICRI	GAGCTC	1 cut(s)	1669
EcoRI	GAATTC	1 cut(s)	773
EcoRII	CCWGG	3 cut(s)	232, 864, 1237
EcoT14I	CCWWGG	3 cut(s)	1062, 1380, 1672
EcoT22I	ATGCAT	2 cut(s)	1318, 1952
EcoT38I	GRGCYC	3 cut(s)	1123, 1671, 1770
ErhI	CCWWGG	3 cut(s)	1062, 1380, 1672
Esp3I	CGTCTC	2 cut(s)	129, 280
FaeI	CATG	7 cut(s)	226, 484, 731, 1066, 1331, 1384, 1786
FatI	CATG	7 cut(s)	222, 480, 727, 1062, 1327, 1380, 1782
FblI	GTMKAC	1 cut(s)	113
Fnu4HI	GCNGC	5 cut(s)	125, 478, 1428, 1614, 2046
FokI	GGATG	9 cut(s)	311, 348, 701, 721, 1214, 1541, 1847, 1864, 1881
FriOI	GRGCYC	3 cut(s)	1123, 1671, 1770
Fsp4HI	GCNGC	5 cut(s)	125, 478, 1428, 1614, 2046
FspBI	CTAG	9 cut(s)	315, 518, 678, 738, 1476, 1673, 1715, 1890, 2001
GlaI	GCGC	1 cut(s)	168
GluI	GCNGC	5 cut(s)	125, 478, 1428, 1614, 2046
GsaI	CCCAGC	1 cut(s)	1550
GsuI	CTGGAG	1 cut(s)	255
HaeIII	GGCC	2 cut(s)	1385, 1859
HapII	CCGG	1 cut(s)	718
HgaI	GACGC	3 cut(s)	199, 1098, 1433
HhaI	GCGC	1 cut(s)	169
Hin1I	GRCGYC	1 cut(s)	1090
Hin1II	CATG	7 cut(s)	226, 484, 731, 1066, 1331, 1384, 1786
Hin6I	GCGC	1 cut(s)	167
HinP1I	GCGC	1 cut(s)	167
HincII	GTYRAC	2 cut(s)	114, 1276
HindII	GTYRAC	2 cut(s)	114, 1276
HindIII	AAGCTT	2 cut(s)	807, 1080
HinfI	GANTC	9 cut(s)	54, 110, 239, 841, 976, 1268, 1541, 1694, 2039
HpaII	CCGG	1 cut(s)	718
HphI	GGTGA	4 cut(s)	19, 524, 790, 2048
Hpy166II	GTNNAC	8 cut(s)	114, 325, 332, 508, 1052, 1276, 1285, 1486
Hpy188I	TCNGA	9 cut(s)	134, 256, 444, 454, 853, 931, 1528, 1597, 1946
Hpy8I	GTNNAC	8 cut(s)	114, 325, 332, 508, 1052, 1276, 1285, 1486
Hpy99I	CGWCG	6 cut(s)	31, 94, 118, 193, 247, 287
HpyAV	CCTTC	6 cut(s)	160, 195, 449, 548, 590, 1935
HpyCH4IV	ACGT	4 cut(s)	212, 285, 1048, 1228
HpyF10VI	GCNNNNNNNGC	7 cut(s)	40, 164, 223, 474, 1230, 1619, 1824
HpySE526I	ACGT	4 cut(s)	212, 285, 1048, 1228
Hsp92I	GRCGYC	1 cut(s)	1090
Hsp92II	CATG	7 cut(s)	226, 484, 731, 1066, 1331, 1384, 1786
HspAI	GCGC	1 cut(s)	167
KpnI	GGTACC	1 cut(s)	385
LguI	GCTCTTC	1 cut(s)	200
LmnI	GCTCC	6 cut(s)	786, 894, 1324, 1666, 1674, 1773
Lsp1109I	GCAGC	4 cut(s)	489, 1439, 1600, 2032
LweI	GCATC	5 cut(s)	1010, 1325, 1742, 1906, 1937
MaeI	CTAG	9 cut(s)	315, 518, 678, 738, 1476, 1673, 1715, 1890, 2001
MaeII	ACGT	4 cut(s)	212, 285, 1048, 1228
MaeIII	GTNAC	6 cut(s)	172, 301, 937, 1108, 1676, 2074
MboII	GAAGA	4 cut(s)	187, 255, 603, 946
MfeI	CAATTG	1 cut(s)	463
MflI	RGATCY	6 cut(s)	256, 308, 317, 1208, 1997, 2060
MhlI	GDGCHC	5 cut(s)	1123, 1287, 1671, 1770, 2013
MluCI	AATT	6 cut(s)	445, 463, 773, 1709, 1801, 2065
MlyI	GAGTC	3 cut(s)	119, 1688, 2048
MmeI	TCCRAC	2 cut(s)	332, 1620
Mph1103I	ATGCAT	2 cut(s)	1318, 1952
MseI	TTAA	5 cut(s)	585, 1068, 1343, 1602, 1743
MslI	CAYNNNNRTG	4 cut(s)	168, 339, 558, 922
MspA1I	CMGCKG	2 cut(s)	62, 2045
MspI	CCGG	1 cut(s)	718
MspR9I	CCNGG	3 cut(s)	234, 866, 1239
MunI	CAATTG	1 cut(s)	463
MvaI	CCWGG	3 cut(s)	234, 866, 1239
MvnI	CGCG	3 cut(s)	158, 167, 169
MwoI	GCNNNNNNNGC	7 cut(s)	40, 164, 223, 474, 1230, 1619, 1824
NcoI	CCATGG	2 cut(s)	1062, 1380
NlaIII	CATG	7 cut(s)	226, 484, 731, 1066, 1331, 1384, 1786
NlaIV	GGNNCC	3 cut(s)	383, 1769, 1883
NmeAIII	GCCGAG	1 cut(s)	1411
NmuCI	GTSAC	3 cut(s)	172, 301, 937
NruI	TCGCGA	1 cut(s)	158
NsiI	ATGCAT	2 cut(s)	1318, 1952
NspI	RCATGY	1 cut(s)	1331
NspV	TTCGAA	1 cut(s)	670
OliI	CACNNNNGTG	3 cut(s)	168, 339, 922
PaeR7I	CTCGAG	3 cut(s)	199, 1212, 1398
PciSI	GCTCTTC	1 cut(s)	200
PcsI	WCGNNNNNNNCGW	3 cut(s)	35, 197, 279
PfeI	GAWTC	6 cut(s)	54, 239, 841, 976, 1268, 1541
PinAI	ACCGGT	1 cut(s)	717
PkrI	GCNGC	5 cut(s)	126, 479, 1429, 1615, 2047
PleI	GAGTC	3 cut(s)	118, 1688, 2047
PpsI	GAGTC	3 cut(s)	118, 1688, 2047
Psp124BI	GAGCTC	1 cut(s)	1671
Psp6I	CCWGG	3 cut(s)	232, 864, 1237
PspFI	CCCAGC	1 cut(s)	1546
PspGI	CCWGG	3 cut(s)	232, 864, 1237
PspN4I	GGNNCC	3 cut(s)	383, 1769, 1883
PsrI	GAACNNNNNNTAC	2 cut(s)	1628, 1660
PsuI	RGATCY	6 cut(s)	256, 308, 317, 1208, 1997, 2060
PvuII	CAGCTG	2 cut(s)	62, 2045
RruI	TCGCGA	1 cut(s)	158
RsaI	GTAC	6 cut(s)	383, 755, 1017, 1053, 1259, 1961
RsaNI	GTAC	6 cut(s)	382, 754, 1016, 1052, 1258, 1960
RseI	CAYNNNNRTG	4 cut(s)	168, 339, 558, 922
SacI	GAGCTC	1 cut(s)	1671
SalI	GTCGAC	1 cut(s)	112
SapI	GCTCTTC	1 cut(s)	200
SaqAI	TTAA	5 cut(s)	585, 1068, 1343, 1602, 1743
SatI	GCNGC	5 cut(s)	125, 478, 1428, 1614, 2046
SchI	GAGTC	3 cut(s)	119, 1688, 2048
ScrFI	CCNGG	3 cut(s)	234, 866, 1239
SduI	GDGCHC	5 cut(s)	1123, 1287, 1671, 1770, 2013
SfaNI	GCATC	5 cut(s)	1010, 1325, 1742, 1906, 1937
SfcI	CTRYAG	2 cut(s)	968, 1686
Sfr274I	CTCGAG	3 cut(s)	199, 1212, 1398
SfuI	TTCGAA	1 cut(s)	670
SlaI	CTCGAG	3 cut(s)	199, 1212, 1398
SmiMI	CAYNNNNRTG	4 cut(s)	168, 339, 558, 922
SmlI	CTYRAG	5 cut(s)	199, 1124, 1175, 1212, 1398
SmoI	CTYRAG	5 cut(s)	199, 1124, 1175, 1212, 1398
Sse9I	AATT	6 cut(s)	445, 463, 773, 1709, 1801, 2065
SsiI	CCGC	6 cut(s)	5, 95, 125, 385, 1288, 1780
SspMI	CTAG	9 cut(s)	315, 518, 678, 738, 1476, 1673, 1715, 1890, 2001
SstI	GAGCTC	1 cut(s)	1671
StyD4I	CCNGG	3 cut(s)	232, 864, 1237
StyI	CCWWGG	3 cut(s)	1062, 1380, 1672
TaiI	ACGT	4 cut(s)	215, 288, 1051, 1231
TaqI	TCGA	9 cut(s)	113, 188, 200, 242, 282, 670, 1213, 1399, 1608
TasI	AATT	6 cut(s)	445, 463, 773, 1709, 1801, 2065
TatI	WGTACW	4 cut(s)	1015, 1051, 1257, 1959
TauI	GCSGC	1 cut(s)	127
TfiI	GAWTC	6 cut(s)	54, 239, 841, 976, 1268, 1541
Tru1I	TTAA	5 cut(s)	585, 1068, 1343, 1602, 1743
Tru9I	TTAA	5 cut(s)	585, 1068, 1343, 1602, 1743
TscAI	CASTG	7 cut(s)	341, 372, 763, 828, 1326, 1488, 2062
TseFI	GTSAC	3 cut(s)	172, 301, 937
TseI	GCWGC	4 cut(s)	477, 1427, 1613, 2045
Tsp45I	GTSAC	3 cut(s)	172, 301, 937
TspDTI	ATGAA	7 cut(s)	26, 379, 716, 786, 1371, 1447, 1545
TspGWI	ACGGA	3 cut(s)	260, 1753, 2062
TspRI	CASTG	7 cut(s)	341, 372, 763, 828, 1326, 1488, 2062
VneI	GTGCAC	1 cut(s)	1283
XapI	RAATTY	3 cut(s)	445, 773, 1709
XbaI	TCTAGA	1 cut(s)	314
XceI	RCATGY	1 cut(s)	1331
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1101, 1438
XhoI	CTCGAG	3 cut(s)	199, 1212, 1398
XmaJI	CCTAGG	1 cut(s)	1672
XmiI	GTMKAC	1 cut(s)	113
XspI	CTAG	9 cut(s)	315, 518, 678, 738, 1476, 1673, 1715, 1890, 2001
Zsp2I	ATGCAT	2 cut(s)	1318, 1952

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.