Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0009233

Physical Location & Seq

Genomic Coordinates Forward (+)

322123 .. 325037

Gene Structure 2915 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG001800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2088 bp

ATGGTTGTGAACGAGAGGGCTGCCAAGAGAGCCAGGAGGAAGGTCGCCGCCGATCTGCCCGACCTCTTCACCTTCCCTCCTCCTCCGGAGTCTCCGGAAGCCTTCCGTGACAACGTGCGCGGCTTCCTCGGCCGCCACGCGCGCGTCACGCTCCCGTCTTCATCGCTCTTCCCCTCCCTGCTGACCTGGCAGATCGCCCTCCGGGTCGACCCCGCCGTCGTCCTTCCCTTGGATATCGTCGAGGAGGACGTCACGCGCTCCAGGCGATCCGTCTACTGCGACCAGTGCCGAGTCGTTGGTTGGAGTGGGCATCCAGTGTGCCGAAAGCGATATCACTTCATTATAAGAAGCAACGCTGAGAGTTGTGATAGTGAGACCCCGTTCCAGTTCCAGCAGCAGCAGCAGCCACAACAAGAGAAGTGGTGCAACTCTATTAGTGCCACAGCGGCGGAGGACACTGCCGATGATGTCGAAGAGTGGGCCTATAACCAATTACATGACAACACTCATCTTCTTCATGCTGTCGTTCACTCCAATGGCTTCGCCCACCTGCTTACCCTCAATGGGCGACAAGGAGGTTCCACCACACTCTCCGGTCGTCACATTCTCGACTTGTGGGATAGGCTCTGTCAAGCCCTCTCCGTCAGGAAGGTGAGTGTGATGGATGTATCCAAAAAGTATGGGATGGAGTACCGATTGCTGCATGCAGTCACCCATGGTCGTTCTTGGTATGGGAATTGGGGTTATGAGTTTCGTTCTGGGAGTTATGCTCTCACTCAAGACTCATACCACAAGGCGGTGGAGACCATCTCCACCTTGCCCCTACACCCTTTTCAATTCCAACCTAGGAGACCCAGGACTCGCCTGCAATCTGTTATTGCCTTTTACCAATCTTTCTCTGATGCCCAACTCCAAACAACCAAAGATCTTTTTACATTTATGTTAAGTCTAATTCCTAAATCACATGCGCCTACTGCATCTAAGAAATCCAAGCATGACACTTCCAATGTTTTATGCGTGTGGACGGTCAATGATGTCCAGCATGTGCAACAGGCTATGATCAAGCTGCTTTCAGCAGTTCGTGAGCCCAATTGGGTGTCAAAACGTGCTCTCAGGGGTGCATTATACAAGACTTTCTCCCCAGAGCTTCTTGATTACTCCCTTAAACACTTGGGAGGGCAGTTGGTAGCCAATAACATGGTAATTGAGACTCGATGCAATCCCGATTCTACTGATGTTGAATACAGACTTGAGCCACTGACTGTTGGAAGATCCGAGTTGAAGCCAAATTTTCCATCCGAACAGCAAATCCTCGGTGACCTCAAATTTTTGTATGATTCCATTCTCCACCCTGACACCATGTTAAGCTATGCACCTCAAGCAGTGAGGGAAAATGTTGTTGATGCAGCAACTAAGCTTCTTGATTGCAAGCAATTCATCAAGGACTTCAAGCCTGATAAAATGTTAGCAGCAGACCCGTCTGGTATTCACCTTTGGTGTCATGTACAGCTTTCAGACCACCCAAAAGATGATTTTGTTCTGCCTCCAGAACTAATTGTATTGCCCCTGAATGCAACTCTTGCTGACCTTAAAAGCGAAGCTACCAAAGCCTTTCAGGAAGTATATGCCATGTTTAAAAGGTTTGAAGTTGTGGAGTTGTTTGGATGTGGCTCTATAAATGATTCAATTACAGCAAAACTGCTGGTTGGAACGAGTGGCTCGGTTGATATGAAAGGGAAATGCCCTGCAAAACATGGTCTTAACCGTTTCCGGATGGAGAGAGGAATTGAAAGCTGGATTGTTGATTGCACATGTGGGACAAAGGATGATGATGGGGAGAGAATGTTGGCTTGTGATACCTGTGGTGTTTGGCAGCACACGAGGTGTGCTGGCATTCATTGCTCCGATGAGATCCCTGCAAAGTTTGTTTGCCTGAGATGTATGAGCTCATATCGGGAGAAAAACCAGAGCACCTGTGATTCTGCCAAGGAAGCTAATTGTGTTCCTTTGTCCAACACAACTTGCAGAGCCAAGGCTGCTGGTCCGGGCGTAGCATCTAACTTAAATATGACTTCTAGTGTACGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PHD

Protein Analysis

695

Amino Acids

78.15

Weight (kDa)

8.1

Isoelectric Point (pI)

42.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WHD_plant_repro	PF25874	341 - 418	1.1e-10	Winged helix-turn-helix domain in plant reproductive proteins
Ubiquitin_At1g33420	PF25565	493 - 581	5.1e-27	At1g33420-like, ubiquitin-like domain
PHD	PF00628	603 - 647	5e-06	PHD-finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0009233)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G33420 AT1G33420
fragaria_vesca	FvH4_2g00220 FvH4_2g00220
malus_domestica	MD05G1001000.v1.1 MD10G1001100.v1.1 MD10G1001300.v1.1
prunus_persica	Prupe.8G002100_v2.0.a1
pyrus_communis	pycom05g00030 pycom10g00120
rosa_chinensis	RchiOBHm_Chr6g0249511
rosa_laevigata	RLG00000015574
rosa_multiflora	Rmu_co8352193.1_g000001 Rmu_sc0022339.1_g000001 Rmu_ssc0000407.1_g000008
rosa_roxburghii	Rroxscaffold_7G00217610
rosa_rugosa	Rorug05G0493100
rosa_samantha	Rh6AG002800 Rh6BG007300 Rh6CG001800 Rh6DG001800
rosa_wichuraiana	Rw6G000320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	344
AarI	CACCTGC	1 cut(s)	558
AasI	GACNNNNNNGTC	1 cut(s)	215
AatII	GACGTC	1 cut(s)	252
Acc36I	ACCTGC	1 cut(s)	558
AccI	GTMKAC	2 cut(s)	207, 273
AccII	CGCG	5 cut(s)	120, 140, 142, 144, 256
AccIII	TCCGGA	3 cut(s)	85, 94, 1770
AciI	CCGC	7 cut(s)	48, 120, 133, 213, 446, 449, 797
AclWI	GGATC	3 cut(s)	261, 1266, 1906
AcoI	YGGCCR	1 cut(s)	130
AcsI	RAATTY	2 cut(s)	1288, 1325
AcyI	GRCGYC	1 cut(s)	249
AdeI	CACNNNGTG	1 cut(s)	1884
AfaI	GTAC	3 cut(s)	692, 1506, 2082
AfiI	CCNNNNNNNGG	3 cut(s)	229, 564, 796
AflIII	ACRYGT	1 cut(s)	1811
AgsI	TTSAA	7 cut(s)	836, 1241, 1282, 1450, 1646, 1686, 1790
AjnI	CCWGG	4 cut(s)	32, 185, 260, 854
AloI	GAACNNNNNNTCC	2 cut(s)	1293, 1325
AluBI	AGCT	9 cut(s)	1066, 1147, 1368, 1417, 1510, 1601, 1794, 1947, 1994
AluI	AGCT	9 cut(s)	1066, 1147, 1368, 1417, 1510, 1601, 1794, 1947, 1994
Alw21I	GWGCWC	3 cut(s)	1111, 1949, 1973
Alw26I	GTCTC	5 cut(s)	96, 368, 797, 844, 1202
AlwI	GGATC	3 cut(s)	261, 1266, 1906
Aor13HI	TCCGGA	3 cut(s)	85, 94, 1770
AoxI	GGCC	2 cut(s)	130, 480
ApoI	RAATTY	2 cut(s)	1288, 1325
AspA2I	CCTAGG	1 cut(s)	845
AspLEI	GCGC	5 cut(s)	120, 142, 144, 258, 970
AspS9I	GGNCC	2 cut(s)	480, 2042
AsuC2I	CCSGG	2 cut(s)	203, 2046
AsuHPI	GGTGA	5 cut(s)	61, 664, 703, 1328, 1481
AvaII	GGWCC	1 cut(s)	2042
AvrII	CCTAGG	1 cut(s)	845
BanII	GRGCYC	2 cut(s)	1089, 1949
BauI	CACGAG	1 cut(s)	1879
BbsI	GAAGAC	1 cut(s)	150
Bbv12I	GWGCWC	3 cut(s)	1111, 1949, 1973
BccI	CCATC	6 cut(s)	655, 679, 815, 1303, 1768, 1826
BceAI	ACGGC	1 cut(s)	200
BcgI	CGANNNNNNTGC	1 cut(s)	36
BciT130I	CCWGG	4 cut(s)	34, 187, 262, 856
BciVI	GTATCC	1 cut(s)	679
BclI	TGATCA	1 cut(s)	1059
BcnI	CCSGG	2 cut(s)	203, 2046
BcoDI	GTCTC	5 cut(s)	96, 368, 797, 844, 1202
BfaI	CTAG	2 cut(s)	846, 2076
BfuAI	ACCTGC	1 cut(s)	558
BfuI	GTATCC	1 cut(s)	679
BglI	GCCNNNNNGGC	1 cut(s)	446
BglII	AGATCT	1 cut(s)	925
BlnI	CCTAGG	1 cut(s)	845
Bme1390I	CCNGG	6 cut(s)	34, 187, 203, 262, 856, 2046
Bme18I	GGWCC	1 cut(s)	2042
BmgT120I	GGNCC	2 cut(s)	480, 2042
BmiI	GGNNCC	1 cut(s)	580
BmrFI	CCNGG	6 cut(s)	34, 187, 203, 262, 856, 2046
BmsI	GCATC	6 cut(s)	319, 892, 986, 1205, 1393, 2063
BpiI	GAAGAC	1 cut(s)	150
BplI	GAGNNNNNCTC	4 cut(s)	754, 786, 794, 826
BpmI	CTGGAG	2 cut(s)	244, 1530
BpuEI	CTTGAG	3 cut(s)	762, 1271, 1362
BpuMI	CCSGG	2 cut(s)	203, 2046
BsaHI	GRCGYC	1 cut(s)	249
BsaI	GGTCTC	3 cut(s)	368, 797, 844
BsaJI	CCNNGG	8 cut(s)	127, 228, 715, 845, 854, 1312, 1986, 2031
BsaWI	WCCGGW	4 cut(s)	85, 94, 593, 1770
BsaXI	ACNNNNNCTCC	4 cut(s)	61, 91, 1829, 1859
Bsc4I	CCNNNNNNNGG	3 cut(s)	229, 564, 796
Bse1I	ACTGG	3 cut(s)	283, 314, 385
Bse3DI	GCAATG	1 cut(s)	1897
BseAI	TCCGGA	3 cut(s)	85, 94, 1770
BseBI	CCWGG	4 cut(s)	34, 187, 262, 856
BseDI	CCNNGG	8 cut(s)	127, 228, 715, 845, 854, 1312, 1986, 2031
BseGI	GGATG	7 cut(s)	310, 670, 690, 1295, 1670, 1779, 1831
BseLI	CCNNNNNNNGG	3 cut(s)	229, 564, 796
BseMI	GCAATG	1 cut(s)	1897
BseMII	CTCAG	3 cut(s)	348, 1126, 1925
BseNI	ACTGG	3 cut(s)	283, 314, 385
BsePI	GCGCGC	1 cut(s)	140
BseRI	GAGGAG	3 cut(s)	69, 72, 257
BseX3I	CGGCCG	1 cut(s)	130
Bsh1236I	CGCG	5 cut(s)	120, 140, 142, 144, 256
Bsh1285I	CGRYCG	2 cut(s)	133, 598
BshFI	GGCC	2 cut(s)	132, 482
BsiEI	CGRYCG	2 cut(s)	133, 598
BsiHKAI	GWGCWC	3 cut(s)	1111, 1949, 1973
BsiSI	CCGG	6 cut(s)	86, 95, 202, 594, 1771, 2045
BslFI	GGGAC	1 cut(s)	1831
BslI	CCNNNNNNNGG	3 cut(s)	229, 564, 796
BsmAI	GTCTC	5 cut(s)	96, 368, 797, 844, 1202
BsmFI	GGGAC	1 cut(s)	1831
BsmI	GAATGC	2 cut(s)	1576, 1893
BsnI	GGCC	2 cut(s)	132, 482
Bso31I	GGTCTC	3 cut(s)	368, 797, 844
Bsp1286I	GDGCHC	4 cut(s)	1089, 1111, 1949, 1973
Bsp13I	TCCGGA	3 cut(s)	85, 94, 1770
Bsp1407I	TGTACA	1 cut(s)	1504
Bsp143I	GATC	7 cut(s)	52, 192, 266, 925, 1059, 1271, 1911
Bsp19I	CCATGG	1 cut(s)	715
BspACI	CCGC	7 cut(s)	48, 120, 133, 213, 446, 449, 797
BspANI	GGCC	2 cut(s)	132, 482
BspCNI	CTCAG	3 cut(s)	349, 1125, 1926
BspEI	TCCGGA	3 cut(s)	85, 94, 1770
BspFNI	CGCG	5 cut(s)	120, 140, 142, 144, 256
BspLI	GGNNCC	1 cut(s)	580
BspMI	ACCTGC	1 cut(s)	558
BspPI	GGATC	3 cut(s)	261, 1266, 1906
BspQI	GCTCTTC	1 cut(s)	173
BspTNI	GGTCTC	3 cut(s)	368, 797, 844
BsrDI	GCAATG	1 cut(s)	1897
BsrGI	TGTACA	1 cut(s)	1504
BsrI	ACTGG	3 cut(s)	283, 314, 385
BssECI	CCNNGG	8 cut(s)	127, 228, 715, 845, 854, 1312, 1986, 2031
BssHII	GCGCGC	1 cut(s)	140
BssMI	GATC	7 cut(s)	52, 192, 266, 925, 1059, 1271, 1911
BssNI	GRCGYC	1 cut(s)	249
BssSI	CACGAG	1 cut(s)	1879
BssT1I	CCWWGG	5 cut(s)	228, 715, 845, 1986, 2031
Bst2BI	CACGAG	1 cut(s)	1879
Bst2UI	CCWGG	4 cut(s)	34, 187, 262, 856
Bst4CI	ACNGT	3 cut(s)	1027, 1264, 1766
Bst6I	CTCTTC	3 cut(s)	71, 173, 468
BstACI	GRCGYC	1 cut(s)	249
BstAPI	GCANNNNNTGC	2 cut(s)	1580, 1899
BstAUI	TGTACA	1 cut(s)	1504
BstC8I	GCNNGC	5 cut(s)	142, 705, 866, 1430, 1891
BstDEI	CTNAG	5 cut(s)	357, 981, 1112, 1413, 1934
BstDSI	CCRYGG	1 cut(s)	715
BstEII	GGTNACC	1 cut(s)	1316
BstF5I	GGATG	7 cut(s)	310, 670, 690, 1295, 1670, 1779, 1831
BstFNI	CGCG	5 cut(s)	120, 140, 142, 144, 256
BstHHI	GCGC	5 cut(s)	120, 142, 144, 258, 970
BstKTI	GATC	7 cut(s)	55, 195, 269, 928, 1062, 1274, 1914
BstMAI	GTCTC	5 cut(s)	96, 368, 797, 844, 1202
BstMBI	GATC	7 cut(s)	52, 192, 266, 925, 1059, 1271, 1911
BstMCI	CGRYCG	2 cut(s)	133, 598
BstNI	CCWGG	4 cut(s)	34, 187, 262, 856
BstNSI	RCATGY	4 cut(s)	707, 968, 1046, 1815
BstPI	GGTNACC	1 cut(s)	1316
BstSCI	CCNGG	6 cut(s)	32, 185, 201, 260, 854, 2044
BstUI	CGCG	5 cut(s)	120, 140, 142, 144, 256
BstV2I	GAAGAC	1 cut(s)	150
BstX2I	RGATCY	3 cut(s)	925, 1271, 1911
BstXI	CCANNNNNNTGG	1 cut(s)	1198
BstYI	RGATCY	3 cut(s)	925, 1271, 1911
BstZI	CGGCCG	1 cut(s)	130
BsuI	GTATCC	1 cut(s)	679
BsuRI	GGCC	2 cut(s)	132, 482
BtgI	CCRYGG	1 cut(s)	715
BtgZI	GCGATG	1 cut(s)	147
BtsCI	GGATG	7 cut(s)	310, 670, 690, 1295, 1670, 1779, 1831
BtsI	GCAGTG	2 cut(s)	456, 1389
BtsIMutI	CAGTG	5 cut(s)	290, 321, 456, 1256, 1389
BveI	ACCTGC	1 cut(s)	558
Cac8I	GCNNGC	5 cut(s)	142, 705, 866, 1430, 1891
CfoI	GCGC	5 cut(s)	120, 142, 144, 258, 970
Cfr13I	GGNCC	2 cut(s)	480, 2042
CseI	GACGC	1 cut(s)	133
Csp6I	GTAC	3 cut(s)	691, 1505, 2081
CspCI	CAANNNNNGTGG	2 cut(s)	401, 436
CviQI	GTAC	3 cut(s)	691, 1505, 2081
DdeI	CTNAG	5 cut(s)	357, 981, 1112, 1413, 1934
DpnI	GATC	7 cut(s)	54, 194, 268, 927, 1061, 1273, 1913
DpnII	GATC	7 cut(s)	52, 192, 266, 925, 1059, 1271, 1911
DraI	TTTAAA	1 cut(s)	1636
DraIII	CACNNNGTG	1 cut(s)	1884
DrdI	GACNNNNNNGTC	1 cut(s)	215
DseDI	GACNNNNNNGTC	1 cut(s)	215
EaeI	YGGCCR	1 cut(s)	130
EagI	CGGCCG	1 cut(s)	130
Eam1104I	CTCTTC	3 cut(s)	71, 173, 468
EarI	CTCTTC	3 cut(s)	71, 173, 468
EciI	GGCGGA	1 cut(s)	464
Ecl136II	GAGCTC	1 cut(s)	1947
EclXI	CGGCCG	1 cut(s)	130
Eco130I	CCWWGG	5 cut(s)	228, 715, 845, 1986, 2031
Eco24I	GRGCYC	2 cut(s)	1089, 1949
Eco31I	GGTCTC	3 cut(s)	368, 797, 844
Eco32I	GATATC	2 cut(s)	235, 332
Eco47I	GGWCC	1 cut(s)	2042
Eco52I	CGGCCG	1 cut(s)	130
Eco53kI	GAGCTC	1 cut(s)	1947
Eco91I	GGTNACC	1 cut(s)	1316
EcoICRI	GAGCTC	1 cut(s)	1947
EcoO65I	GGTNACC	1 cut(s)	1316
EcoRII	CCWGG	4 cut(s)	32, 185, 260, 854
EcoRV	GATATC	2 cut(s)	235, 332
EcoT14I	CCWWGG	5 cut(s)	228, 715, 845, 1986, 2031
EcoT38I	GRGCYC	2 cut(s)	1089, 1949
ErhI	CCWWGG	5 cut(s)	228, 715, 845, 1986, 2031
FaqI	GGGAC	1 cut(s)	1831
FauI	CCCGC	1 cut(s)	220
FbaI	TGATCA	1 cut(s)	1059
FblI	GTMKAC	2 cut(s)	207, 273
FokI	GGATG	7 cut(s)	297, 677, 697, 1282, 1677, 1786, 1838
FriOI	GRGCYC	2 cut(s)	1089, 1949
FspBI	CTAG	2 cut(s)	846, 2076
GlaI	GCGC	5 cut(s)	119, 141, 143, 257, 969
GsuI	CTGGAG	2 cut(s)	244, 1530
HaeIII	GGCC	2 cut(s)	132, 482
HapII	CCGG	6 cut(s)	86, 95, 202, 594, 1771, 2045
HgaI	GACGC	1 cut(s)	133
HhaI	GCGC	5 cut(s)	120, 142, 144, 258, 970
Hin1I	GRCGYC	1 cut(s)	249
Hin6I	GCGC	5 cut(s)	118, 140, 142, 256, 968
HinP1I	GCGC	5 cut(s)	118, 140, 142, 256, 968
HincII	GTYRAC	1 cut(s)	208
HindII	GTYRAC	1 cut(s)	208
HindIII	AAGCTT	1 cut(s)	1415
HinfI	GANTC	9 cut(s)	89, 291, 782, 859, 1210, 1226, 1337, 1682, 1979
HpaII	CCGG	6 cut(s)	86, 95, 202, 594, 1771, 2045
HphI	GGTGA	5 cut(s)	61, 664, 703, 1328, 1481
Hpy166II	GTNNAC	6 cut(s)	10, 208, 274, 529, 1023, 2081
Hpy188I	TCNGA	5 cut(s)	901, 1276, 1300, 1516, 1906
Hpy8I	GTNNAC	6 cut(s)	10, 208, 274, 529, 1023, 2081
Hpy99I	CGWCG	2 cut(s)	221, 242
HpyAV	CCTTC	5 cut(s)	34, 82, 112, 233, 643
HpyCH4III	ACNGT	3 cut(s)	1027, 1264, 1766
HpyCH4IV	ACGT	4 cut(s)	114, 249, 1105, 2083
HpyF3I	CTNAG	5 cut(s)	357, 981, 1112, 1413, 1934
HpySE526I	ACGT	4 cut(s)	114, 249, 1105, 2083
Hsp92I	GRCGYC	1 cut(s)	249
HspAI	GCGC	5 cut(s)	118, 140, 142, 256, 968
Kpn2I	TCCGGA	3 cut(s)	85, 94, 1770
Ksp22I	TGATCA	1 cut(s)	1059
Kzo9I	GATC	7 cut(s)	52, 192, 266, 925, 1059, 1271, 1911
LguI	GCTCTTC	1 cut(s)	173
LmnI	GCTCC	3 cut(s)	156, 263, 1907
LweI	GCATC	6 cut(s)	319, 892, 986, 1205, 1393, 2063
MaeI	CTAG	2 cut(s)	846, 2076
MaeII	ACGT	4 cut(s)	114, 249, 1105, 2083
MaeIII	GTNAC	6 cut(s)	107, 145, 250, 599, 709, 1316
MalI	GATC	7 cut(s)	54, 194, 268, 927, 1061, 1273, 1913
MauBI	CGCGCGCG	1 cut(s)	140
MboI	GATC	7 cut(s)	52, 192, 266, 925, 1059, 1271, 1911
MboII	GAAGA	7 cut(s)	58, 150, 160, 485, 503, 506, 1281
MfeI	CAATTG	1 cut(s)	1090
MflI	RGATCY	3 cut(s)	925, 1271, 1911
MhlI	GDGCHC	4 cut(s)	1089, 1111, 1949, 1973
MlyI	GAGTC	5 cut(s)	98, 300, 776, 853, 1204
MmeI	TCCRAC	5 cut(s)	281, 865, 1246, 1687, 2037
MroI	TCCGGA	3 cut(s)	85, 94, 1770
MseI	TTAA	7 cut(s)	944, 1164, 1364, 1590, 1635, 1761, 2063
MslI	CAYNNNNRTG	1 cut(s)	534
MspA1I	CMGCKG	1 cut(s)	446
MspI	CCGG	6 cut(s)	86, 95, 202, 594, 1771, 2045
MspR9I	CCNGG	6 cut(s)	34, 187, 203, 262, 856, 2046
MunI	CAATTG	1 cut(s)	1090
Mva1269I	GAATGC	2 cut(s)	1576, 1893
MvaI	CCWGG	4 cut(s)	34, 187, 262, 856
MvnI	CGCG	5 cut(s)	120, 140, 142, 144, 256
NciI	CCSGG	2 cut(s)	203, 2046
NcoI	CCATGG	1 cut(s)	715
NdeII	GATC	7 cut(s)	52, 192, 266, 925, 1059, 1271, 1911
NlaIV	GGNNCC	1 cut(s)	580
NmeAIII	GCCGAG	2 cut(s)	108, 314
NmuCI	GTSAC	6 cut(s)	107, 145, 250, 599, 709, 1316
NspI	RCATGY	4 cut(s)	707, 968, 1046, 1815
PaeI	GCATGC	1 cut(s)	707
PaqCI	CACCTGC	1 cut(s)	558
PauI	GCGCGC	1 cut(s)	140
PciI	ACATGT	1 cut(s)	1811
PciSI	GCTCTTC	1 cut(s)	173
PcsI	WCGNNNNNNNCGW	2 cut(s)	213, 246
PctI	GAATGC	2 cut(s)	1576, 1893
PfeI	GAWTC	4 cut(s)	1226, 1337, 1682, 1979
PleI	GAGTC	5 cut(s)	97, 299, 776, 853, 1204
PpsI	GAGTC	5 cut(s)	97, 299, 776, 853, 1204
PscI	ACATGT	1 cut(s)	1811
PsiI	TTATAA	1 cut(s)	344
Psp124BI	GAGCTC	1 cut(s)	1949
Psp6I	CCWGG	4 cut(s)	32, 185, 260, 854
PspEI	GGTNACC	1 cut(s)	1316
PspGI	CCWGG	4 cut(s)	32, 185, 260, 854
PspN4I	GGNNCC	1 cut(s)	580
PspPI	GGNCC	2 cut(s)	480, 2042
PsuI	RGATCY	3 cut(s)	925, 1271, 1911
PteI	GCGCGC	1 cut(s)	140
RsaI	GTAC	3 cut(s)	692, 1506, 2082
RsaNI	GTAC	3 cut(s)	691, 1505, 2081
RseI	CAYNNNNRTG	1 cut(s)	534
SacI	GAGCTC	1 cut(s)	1949
SalI	GTCGAC	1 cut(s)	206
SapI	GCTCTTC	1 cut(s)	173
SaqAI	TTAA	7 cut(s)	944, 1164, 1364, 1590, 1635, 1761, 2063
Sau3AI	GATC	7 cut(s)	52, 192, 266, 925, 1059, 1271, 1911
Sau96I	GGNCC	2 cut(s)	480, 2042
SchI	GAGTC	5 cut(s)	98, 300, 776, 853, 1204
ScrFI	CCNGG	6 cut(s)	34, 187, 203, 262, 856, 2046
SduI	GDGCHC	4 cut(s)	1089, 1111, 1949, 1973
SfaNI	GCATC	6 cut(s)	319, 892, 986, 1205, 1393, 2063
SinI	GGWCC	1 cut(s)	2042
SmiMI	CAYNNNNRTG	1 cut(s)	534
SmlI	CTYRAG	3 cut(s)	777, 1250, 1377
SmoI	CTYRAG	3 cut(s)	777, 1250, 1377
SphI	GCATGC	1 cut(s)	707
SsiI	CCGC	7 cut(s)	48, 120, 133, 213, 446, 449, 797
SspMI	CTAG	2 cut(s)	846, 2076
SstI	GAGCTC	1 cut(s)	1949
StyD4I	CCNGG	6 cut(s)	32, 185, 201, 260, 854, 2044
StyI	CCWWGG	5 cut(s)	228, 715, 845, 1986, 2031
TaaI	ACNGT	3 cut(s)	1027, 1264, 1766
TaiI	ACGT	4 cut(s)	117, 252, 1108, 2086
TaqI	TCGA	5 cut(s)	207, 240, 471, 609, 1213
TatI	WGTACW	1 cut(s)	1504
TauI	GCSGC	4 cut(s)	50, 123, 135, 449
TfiI	GAWTC	4 cut(s)	1226, 1337, 1682, 1979
Tru1I	TTAA	7 cut(s)	944, 1164, 1364, 1590, 1635, 1761, 2063
Tru9I	TTAA	7 cut(s)	944, 1164, 1364, 1590, 1635, 1761, 2063
TscAI	CASTG	5 cut(s)	290, 321, 463, 1263, 1389
TseFI	GTSAC	6 cut(s)	107, 145, 250, 599, 709, 1316
Tsp45I	GTSAC	6 cut(s)	107, 145, 250, 599, 709, 1316
TspDTI	ATGAA	6 cut(s)	150, 328, 506, 1426, 1745, 1886
TspGWI	ACGGA	3 cut(s)	95, 259, 631
TspRI	CASTG	5 cut(s)	290, 321, 463, 1263, 1389
VpaK11BI	GGWCC	1 cut(s)	2042
XapI	RAATTY	2 cut(s)	1288, 1325
XceI	RCATGY	4 cut(s)	707, 968, 1046, 1815
XmaJI	CCTAGG	1 cut(s)	845
XmiI	GTMKAC	2 cut(s)	207, 273
XspI	CTAG	2 cut(s)	846, 2076
ZraI	GACGTC	1 cut(s)	250

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.