Rh6AG002800

Phd finger protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0009233
Physical Location & Seq
Forward (+)
564773 .. 567655
2883 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG002800.1

Sequence Viewer

Length: 2079 bp
ATGGTTGTGAACGAGAGGGCTGCCAAGAGAGCCAGGAGGAAGGTCGCCGCCGATCTGCCCGACCTCTTCACCTTCCCTCCCCCTCCGGATTCTCCGGAAGCCTTCCGTGACAACGTGCGCGGCTTCCTCGGCCGCCACGCGCGCGTCACGCTCCCGTCTTCCTCGCTCTTTCCCTCCCTGCTGACCTGGCAGATCGCCCTCCGGGTCGACCCCGCCGTCGTACTTCCCTTGGATATCGTCGAGGAGGACGTCACGCGCTCCAGGCGATCCGTCTACTGCGACCAGTGCCGAGTCGTTGGTTGGAGTGGGCATCCAGTGTGCCGAAAGCGATATCACTTCATTATAAGAAGCAACGCTGAGAGTTGTGATAGTGAGACCCCGTTCCAGTTCCAGCAGCCACAACAAGAGAAGTGGTGCAACTCTATTAGTGCCACCGCGGCGGAGGACGCTGCCGATGATGTCGAAGAGTGGGCCTATAACCAATTACATGACAACACTCATCTTCTTCATGCTGTCGTTCACTCCAATGGCTTCGCCCACCTGCTTACCCTCAATGGGCGACAAGGAGGTTCCACCACACTCTCCGGTCGTCACATTCTCGACTTGTGGGATAGGCTCTGTCAAGCCCTCTCCGTCAGGAAGGTGAGTGTGATGGATGTATCAAAAAAGTATGGGATGGAGTACCGATTGCTGCATGCAGTCACCCATGGTCGTTCTTGGTATGGGAATTGGGGTTATGAGTTTCGTTCTGGGAGCTATGCTCTCACTCAAGACTCATACCACAAGGCAGTGGAGACCATCTCCGCCTTGCCCCTACACCCTTTTCAATTCCAACCTAGGAGACCCAGGACTCGCCTGCAATCTGTTATTGCCTTTTACCAATCTTTCTCTGATGCCCGACTCCAAACAACCAAAGATCTTTTTACATTTTTGTTAAGTCTAATTCCTAAATCACATGCGCCTACCGCATCTAAGAAACCCAAGCATGACACTTCCAATGTTTTATGCGTGTGGACGGCCAATGATGTCCAGCATGTGCAACAGGCTATGATCAAGCTGCTTTCAGCAGTTCGTGAGCCCAATTGGGTGTCAAAACGTGCTCTCAGGGGTGCATTATACAAGACTTTCTCCCCAGAGCTTCTTGATTACTCCCTTAAACACTTGGGAGGGCAGTTGGTAGCCAATAACATGGTAATTGAGACTCGATGCAATCCTGATTCTACCGATGTTGAATACAGACTTGAGCCACTGACTGTTGGAAGATCCGAGTTGAAGCCAAATTTTCCATCCGAACAGCAAATCCTCGGTGACCTCAAATTTTTGTATGATTCCATTCTCCACCCTGACACCATGTTAAGCCATGCACCTCAAGCAGTGAGGGAGAATGTTGTTGATGCAGCAACTAAGCTTCTTGATTGCAAGCAATTCATCAAGGACTTCAAGCCTGATAAAATGTTAGCAGCAGACCCATCTGGTATTCACCTTTGGTGTCATGTACAGCTTTCAGACCACCCAAAAGATGATTTTGTTCTGCCTCCAGAACTAATTGTATTGCCCCTGAATGCTACTCTTGCTGACCTTAAAAGCGAAGCTACCAAAGCCTTTCAGGAAGTATATGCCATGTTTAAAAGGTTTGAAGTTGTGGAGTTGTTTGGATGTGGCTCTATAAATGATTCAATTACAGCAAAACTGCTGGTTGGAATGAGTGGCTCGGTTGATATTAAAGGGAAATGCCCTGCAAAACATGGTCTTAACCGTTTCCGGATGGAGCGAGGAATTGAAAGCTGGATTGTTGATTGCATATGTGGGACAAAGGATGATGATGGGGAGAGAATGTTGGCTTGTGATACATGTGGTGTTTGGCAGCACACGAGGTGTGCTGGCATTCATTGCTCCGATGAGATCCCTGCAAAGTTTGTTTGCCTGATATGTATGAGCTCATATCGGGAGAAAAACCAGAGCACCTGTGATTCTGCCAAGGAAGCTAATTGTGTTCCTTTGTCCAACACAACTTGCAGAGCCAAGGCTGCTGGTCCGGACGTAGCATCTAACTTAAATATGACTTCTAGTGTACGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PHD

Protein Analysis

692

Amino Acids

77.69

Weight (kDa)

7.95

Isoelectric Point (pI)

41.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WHD_plant_repro PF25874 338 - 415 7e-11 Winged helix-turn-helix domain in plant reproductive proteins
Ubiquitin_At1g33420 PF25565 490 - 578 3.5e-27 At1g33420-like, ubiquitin-like domain
PHD_5 PF20826 597 - 644 1.7e-06 PhD finger domain
PHD PF00628 600 - 644 6.1e-06 PHD-finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 344
AarI CACCTGC 1 cut(s) 549
AasI GACNNNNNNGTC 1 cut(s) 215
AatII GACGTC 1 cut(s) 252
Acc36I ACCTGC 1 cut(s) 549
AccI GTMKAC 2 cut(s) 207, 273
AccII CGCG 6 cut(s) 120, 140, 142, 144, 256, 437
AccIII TCCGGA 4 cut(s) 85, 94, 1761, 2035
AciI CCGC 9 cut(s) 48, 120, 133, 213, 435, 437, 440, 804, 966
AclWI GGATC 3 cut(s) 261, 1257, 1897
AcoI YGGCCR 2 cut(s) 130, 1017
AcsI RAATTY 2 cut(s) 1279, 1316
AcyI GRCGYC 1 cut(s) 249
AdeI CACNNNGTG 1 cut(s) 1875
AfaI GTAC 4 cut(s) 222, 683, 1497, 2073
AfiI CCNNNNNNNGG 1 cut(s) 555
AflIII ACRYGT 1 cut(s) 1850
AgsI TTSAA 7 cut(s) 827, 1232, 1273, 1441, 1637, 1677, 1781
AjnI CCWGG 4 cut(s) 32, 185, 260, 845
AloI GAACNNNNNNTCC 2 cut(s) 1284, 1316
AluBI AGCT 9 cut(s) 756, 1057, 1138, 1408, 1501, 1592, 1785, 1938, 1985
AluI AGCT 9 cut(s) 756, 1057, 1138, 1408, 1501, 1592, 1785, 1938, 1985
Alw21I GWGCWC 3 cut(s) 1102, 1940, 1964
Alw26I GTCTC 4 cut(s) 368, 788, 835, 1193
AlwI GGATC 3 cut(s) 261, 1257, 1897
Aor13HI TCCGGA 4 cut(s) 85, 94, 1761, 2035
AoxI GGCC 3 cut(s) 130, 471, 1017
ApeKI GCWGC 9 cut(s) 20, 394, 449, 691, 1057, 1397, 1460, 1864, 2027
ApoI RAATTY 2 cut(s) 1279, 1316
AspA2I CCTAGG 1 cut(s) 836
AspLEI GCGC 5 cut(s) 120, 142, 144, 258, 961
AspS9I GGNCC 2 cut(s) 471, 2033
AsuC2I CCSGG 1 cut(s) 203
AsuHPI GGTGA 5 cut(s) 61, 655, 694, 1319, 1472
AvaII GGWCC 1 cut(s) 2033
AvrII CCTAGG 1 cut(s) 836
BanII GRGCYC 2 cut(s) 1080, 1940
BauI CACGAG 1 cut(s) 1870
BbsI GAAGAC 1 cut(s) 150
Bbv12I GWGCWC 3 cut(s) 1102, 1940, 1964
BbvI GCAGC 9 cut(s) 7, 406, 436, 678, 1044, 1409, 1472, 1876, 2014
BccI CCATC 7 cut(s) 646, 670, 806, 1294, 1477, 1759, 1817
BceAI ACGGC 2 cut(s) 200, 1032
BcgI CGANNNNNNTGC 1 cut(s) 36
BciT130I CCWGG 4 cut(s) 34, 187, 262, 847
BclI TGATCA 1 cut(s) 1050
BcnI CCSGG 1 cut(s) 203
BcoDI GTCTC 4 cut(s) 368, 788, 835, 1193
BfaI CTAG 2 cut(s) 837, 2067
BfuAI ACCTGC 1 cut(s) 549
BglI GCCNNNNNGGC 1 cut(s) 437
BglII AGATCT 1 cut(s) 916
BlnI CCTAGG 1 cut(s) 836
Bme1390I CCNGG 5 cut(s) 34, 187, 203, 262, 847
Bme18I GGWCC 1 cut(s) 2033
BmgT120I GGNCC 2 cut(s) 471, 2033
BmiI GGNNCC 1 cut(s) 571
BmrFI CCNGG 5 cut(s) 34, 187, 203, 262, 847
BmsI GCATC 6 cut(s) 319, 883, 977, 1196, 1384, 2054
BpiI GAAGAC 1 cut(s) 150
BplI GAGNNNNNCTC 4 cut(s) 745, 777, 785, 817
BpmI CTGGAG 2 cut(s) 244, 1521
BpuEI CTTGAG 3 cut(s) 753, 1262, 1353
BpuMI CCSGG 1 cut(s) 203
BsaHI GRCGYC 1 cut(s) 249
BsaI GGTCTC 3 cut(s) 368, 788, 835
BsaJI CCNNGG 9 cut(s) 127, 228, 435, 706, 836, 845, 1303, 1977, 2022
BsaWI WCCGGW 5 cut(s) 85, 94, 584, 1761, 2035
BsaXI ACNNNNNCTCC 4 cut(s) 61, 91, 1820, 1850
Bsc4I CCNNNNNNNGG 1 cut(s) 555
Bse1I ACTGG 3 cut(s) 283, 314, 385
Bse3DI GCAATG 1 cut(s) 1888
BseAI TCCGGA 4 cut(s) 85, 94, 1761, 2035
BseBI CCWGG 4 cut(s) 34, 187, 262, 847
BseDI CCNNGG 9 cut(s) 127, 228, 435, 706, 836, 845, 1303, 1977, 2022
BseGI GGATG 7 cut(s) 310, 661, 681, 1286, 1661, 1770, 1822
BseLI CCNNNNNNNGG 1 cut(s) 555
BseMI GCAATG 1 cut(s) 1888
BseMII CTCAG 2 cut(s) 348, 1117
BseNI ACTGG 3 cut(s) 283, 314, 385
BsePI GCGCGC 1 cut(s) 140
BseRI GAGGAG 1 cut(s) 257
BseX3I CGGCCG 1 cut(s) 130
BseXI GCAGC 9 cut(s) 7, 406, 436, 678, 1044, 1409, 1472, 1876, 2014
Bsh1236I CGCG 6 cut(s) 120, 140, 142, 144, 256, 437
Bsh1285I CGRYCG 2 cut(s) 133, 589
BshFI GGCC 3 cut(s) 132, 473, 1019
BsiEI CGRYCG 2 cut(s) 133, 589
BsiHKAI GWGCWC 3 cut(s) 1102, 1940, 1964
BsiSI CCGG 6 cut(s) 86, 95, 202, 585, 1762, 2036
BslFI GGGAC 1 cut(s) 1822
BslI CCNNNNNNNGG 1 cut(s) 555
BsmAI GTCTC 4 cut(s) 368, 788, 835, 1193
BsmFI GGGAC 1 cut(s) 1822
BsmI GAATGC 2 cut(s) 1567, 1884
BsnI GGCC 3 cut(s) 132, 473, 1019
Bso31I GGTCTC 3 cut(s) 368, 788, 835
Bsp1286I GDGCHC 4 cut(s) 1080, 1102, 1940, 1964
Bsp13I TCCGGA 4 cut(s) 85, 94, 1761, 2035
Bsp1407I TGTACA 1 cut(s) 1495
Bsp143I GATC 7 cut(s) 52, 192, 266, 916, 1050, 1262, 1902
Bsp19I CCATGG 1 cut(s) 706
BspACI CCGC 9 cut(s) 48, 120, 133, 213, 435, 437, 440, 804, 966
BspANI GGCC 3 cut(s) 132, 473, 1019
BspCNI CTCAG 2 cut(s) 349, 1116
BspEI TCCGGA 4 cut(s) 85, 94, 1761, 2035
BspFNI CGCG 6 cut(s) 120, 140, 142, 144, 256, 437
BspLI GGNNCC 1 cut(s) 571
BspMI ACCTGC 1 cut(s) 549
BspPI GGATC 3 cut(s) 261, 1257, 1897
BspTNI GGTCTC 3 cut(s) 368, 788, 835
BsrDI GCAATG 1 cut(s) 1888
BsrGI TGTACA 1 cut(s) 1495
BsrI ACTGG 3 cut(s) 283, 314, 385
BssECI CCNNGG 9 cut(s) 127, 228, 435, 706, 836, 845, 1303, 1977, 2022
BssHII GCGCGC 1 cut(s) 140
BssMI GATC 7 cut(s) 52, 192, 266, 916, 1050, 1262, 1902
BssNI GRCGYC 1 cut(s) 249
BssSI CACGAG 1 cut(s) 1870
BssT1I CCWWGG 5 cut(s) 228, 706, 836, 1977, 2022
Bst2BI CACGAG 1 cut(s) 1870
Bst2UI CCWGG 4 cut(s) 34, 187, 262, 847
Bst4CI ACNGT 2 cut(s) 1255, 1757
Bst6I CTCTTC 2 cut(s) 71, 459
BstACI GRCGYC 1 cut(s) 249
BstAPI GCANNNNNTGC 1 cut(s) 1890
BstAUI TGTACA 1 cut(s) 1495
BstC8I GCNNGC 5 cut(s) 142, 696, 857, 1421, 1882
BstDEI CTNAG 4 cut(s) 357, 972, 1103, 1404
BstDSI CCRYGG 2 cut(s) 435, 706
BstEII GGTNACC 1 cut(s) 1307
BstF5I GGATG 7 cut(s) 310, 661, 681, 1286, 1661, 1770, 1822
BstFNI CGCG 6 cut(s) 120, 140, 142, 144, 256, 437
BstHHI GCGC 5 cut(s) 120, 142, 144, 258, 961
BstKTI GATC 7 cut(s) 55, 195, 269, 919, 1053, 1265, 1905
BstMAI GTCTC 4 cut(s) 368, 788, 835, 1193
BstMBI GATC 7 cut(s) 52, 192, 266, 916, 1050, 1262, 1902
BstMCI CGRYCG 2 cut(s) 133, 589
BstNI CCWGG 4 cut(s) 34, 187, 262, 847
BstNSI RCATGY 4 cut(s) 698, 959, 1037, 1854
BstPI GGTNACC 1 cut(s) 1307
BstSCI CCNGG 5 cut(s) 32, 185, 201, 260, 845
BstUI CGCG 6 cut(s) 120, 140, 142, 144, 256, 437
BstV1I GCAGC 9 cut(s) 7, 406, 436, 678, 1044, 1409, 1472, 1876, 2014
BstV2I GAAGAC 1 cut(s) 150
BstX2I RGATCY 3 cut(s) 916, 1262, 1902
BstXI CCANNNNNNTGG 1 cut(s) 1189
BstYI RGATCY 3 cut(s) 916, 1262, 1902
BstZI CGGCCG 1 cut(s) 130
BsuRI GGCC 3 cut(s) 132, 473, 1019
BtgI CCRYGG 2 cut(s) 435, 706
BtsCI GGATG 7 cut(s) 310, 661, 681, 1286, 1661, 1770, 1822
BtsI GCAGTG 2 cut(s) 795, 1380
BtsIMutI CAGTG 5 cut(s) 290, 321, 795, 1247, 1380
BveI ACCTGC 1 cut(s) 549
Cac8I GCNNGC 5 cut(s) 142, 696, 857, 1421, 1882
CfoI GCGC 5 cut(s) 120, 142, 144, 258, 961
Cfr13I GGNCC 2 cut(s) 471, 2033
Cfr42I CCGCGG 1 cut(s) 438
CseI GACGC 2 cut(s) 133, 455
Csp6I GTAC 4 cut(s) 221, 682, 1496, 2072
CspCI CAANNNNNGTGG 2 cut(s) 392, 427
CviQI GTAC 4 cut(s) 221, 682, 1496, 2072
DdeI CTNAG 4 cut(s) 357, 972, 1103, 1404
DpnI GATC 7 cut(s) 54, 194, 268, 918, 1052, 1264, 1904
DpnII GATC 7 cut(s) 52, 192, 266, 916, 1050, 1262, 1902
DraI TTTAAA 1 cut(s) 1627
DraIII CACNNNGTG 1 cut(s) 1875
DrdI GACNNNNNNGTC 1 cut(s) 215
DseDI GACNNNNNNGTC 1 cut(s) 215
EaeI YGGCCR 2 cut(s) 130, 1017
EagI CGGCCG 1 cut(s) 130
Eam1104I CTCTTC 2 cut(s) 71, 459
EarI CTCTTC 2 cut(s) 71, 459
EciI GGCGGA 2 cut(s) 455, 793
Ecl136II GAGCTC 1 cut(s) 1938
EclXI CGGCCG 1 cut(s) 130
Eco130I CCWWGG 5 cut(s) 228, 706, 836, 1977, 2022
Eco24I GRGCYC 2 cut(s) 1080, 1940
Eco31I GGTCTC 3 cut(s) 368, 788, 835
Eco32I GATATC 2 cut(s) 235, 332
Eco47I GGWCC 1 cut(s) 2033
Eco52I CGGCCG 1 cut(s) 130
Eco53kI GAGCTC 1 cut(s) 1938
Eco91I GGTNACC 1 cut(s) 1307
EcoICRI GAGCTC 1 cut(s) 1938
EcoO65I GGTNACC 1 cut(s) 1307
EcoRII CCWGG 4 cut(s) 32, 185, 260, 845
EcoRV GATATC 2 cut(s) 235, 332
EcoT14I CCWWGG 5 cut(s) 228, 706, 836, 1977, 2022
EcoT38I GRGCYC 2 cut(s) 1080, 1940
ErhI CCWWGG 5 cut(s) 228, 706, 836, 1977, 2022
FaqI GGGAC 1 cut(s) 1822
FauI CCCGC 1 cut(s) 220
FauNDI CATATG 1 cut(s) 1802
FbaI TGATCA 1 cut(s) 1050
FblI GTMKAC 2 cut(s) 207, 273
FokI GGATG 7 cut(s) 297, 668, 688, 1273, 1668, 1777, 1829
FriOI GRGCYC 2 cut(s) 1080, 1940
FspBI CTAG 2 cut(s) 837, 2067
GlaI GCGC 5 cut(s) 119, 141, 143, 257, 960
GsuI CTGGAG 2 cut(s) 244, 1521
HaeIII GGCC 3 cut(s) 132, 473, 1019
HapII CCGG 6 cut(s) 86, 95, 202, 585, 1762, 2036
HgaI GACGC 2 cut(s) 133, 455
HhaI GCGC 5 cut(s) 120, 142, 144, 258, 961
Hin1I GRCGYC 1 cut(s) 249
Hin6I GCGC 5 cut(s) 118, 140, 142, 256, 959
HinP1I GCGC 5 cut(s) 118, 140, 142, 256, 959
HincII GTYRAC 1 cut(s) 208
HindII GTYRAC 1 cut(s) 208
HindIII AAGCTT 1 cut(s) 1406
HpaII CCGG 6 cut(s) 86, 95, 202, 585, 1762, 2036
HphI GGTGA 5 cut(s) 61, 655, 694, 1319, 1472
Hpy166II GTNNAC 6 cut(s) 10, 208, 274, 520, 1014, 2072
Hpy188I TCNGA 5 cut(s) 892, 1267, 1291, 1507, 1897
Hpy8I GTNNAC 6 cut(s) 10, 208, 274, 520, 1014, 2072
Hpy99I CGWCG 2 cut(s) 221, 242
HpyAV CCTTC 4 cut(s) 34, 82, 112, 634
HpyCH4III ACNGT 2 cut(s) 1255, 1757
HpyCH4IV ACGT 5 cut(s) 114, 249, 1096, 2040, 2074
HpyF3I CTNAG 4 cut(s) 357, 972, 1103, 1404
HpySE526I ACGT 5 cut(s) 114, 249, 1096, 2040, 2074
Hsp92I GRCGYC 1 cut(s) 249
HspAI GCGC 5 cut(s) 118, 140, 142, 256, 959
Kpn2I TCCGGA 4 cut(s) 85, 94, 1761, 2035
Ksp22I TGATCA 1 cut(s) 1050
KspI CCGCGG 1 cut(s) 438
Kzo9I GATC 7 cut(s) 52, 192, 266, 916, 1050, 1262, 1902
LmnI GCTCC 5 cut(s) 156, 263, 753, 1768, 1898
Lsp1109I GCAGC 9 cut(s) 7, 406, 436, 678, 1044, 1409, 1472, 1876, 2014
LweI GCATC 6 cut(s) 319, 883, 977, 1196, 1384, 2054
MaeI CTAG 2 cut(s) 837, 2067
MaeII ACGT 5 cut(s) 114, 249, 1096, 2040, 2074
MaeIII GTNAC 6 cut(s) 107, 145, 250, 590, 700, 1307
MalI GATC 7 cut(s) 54, 194, 268, 918, 1052, 1264, 1904
MauBI CGCGCGCG 1 cut(s) 140
MboI GATC 7 cut(s) 52, 192, 266, 916, 1050, 1262, 1902
MboII GAAGA 6 cut(s) 58, 150, 476, 494, 497, 1272
MfeI CAATTG 1 cut(s) 1081
MflI RGATCY 3 cut(s) 916, 1262, 1902
MhlI GDGCHC 4 cut(s) 1080, 1102, 1940, 1964
MlyI GAGTC 5 cut(s) 300, 767, 844, 894, 1195
MmeI TCCRAC 5 cut(s) 281, 856, 1237, 1678, 2028
MroI TCCGGA 4 cut(s) 85, 94, 1761, 2035
MseI TTAA 8 cut(s) 935, 1155, 1355, 1581, 1626, 1722, 1752, 2054
MslI CAYNNNNRTG 1 cut(s) 525
MspA1I CMGCKG 1 cut(s) 437
MspI CCGG 6 cut(s) 86, 95, 202, 585, 1762, 2036
MspR9I CCNGG 5 cut(s) 34, 187, 203, 262, 847
MunI CAATTG 1 cut(s) 1081
Mva1269I GAATGC 2 cut(s) 1567, 1884
MvaI CCWGG 4 cut(s) 34, 187, 262, 847
MvnI CGCG 6 cut(s) 120, 140, 142, 144, 256, 437
NciI CCSGG 1 cut(s) 203
NcoI CCATGG 1 cut(s) 706
NdeI CATATG 1 cut(s) 1802
NdeII GATC 7 cut(s) 52, 192, 266, 916, 1050, 1262, 1902
NlaIV GGNNCC 1 cut(s) 571
NmeAIII GCCGAG 2 cut(s) 108, 314
NmuCI GTSAC 6 cut(s) 107, 145, 250, 590, 700, 1307
NspI RCATGY 4 cut(s) 698, 959, 1037, 1854
PaeI GCATGC 1 cut(s) 698
PaqCI CACCTGC 1 cut(s) 549
PauI GCGCGC 1 cut(s) 140
PciI ACATGT 1 cut(s) 1850
PcsI WCGNNNNNNNCGW 2 cut(s) 213, 246
PctI GAATGC 2 cut(s) 1567, 1884
PfeI GAWTC 5 cut(s) 89, 1217, 1328, 1673, 1970
PleI GAGTC 5 cut(s) 299, 767, 844, 894, 1195
PpsI GAGTC 5 cut(s) 299, 767, 844, 894, 1195
PscI ACATGT 1 cut(s) 1850
PsiI TTATAA 1 cut(s) 344
Psp124BI GAGCTC 1 cut(s) 1940
Psp6I CCWGG 4 cut(s) 32, 185, 260, 845
PspEI GGTNACC 1 cut(s) 1307
PspGI CCWGG 4 cut(s) 32, 185, 260, 845
PspN4I GGNNCC 1 cut(s) 571
PspPI GGNCC 2 cut(s) 471, 2033
PsuI RGATCY 3 cut(s) 916, 1262, 1902
PteI GCGCGC 1 cut(s) 140
RsaI GTAC 4 cut(s) 222, 683, 1497, 2073
RsaNI GTAC 4 cut(s) 221, 682, 1496, 2072
RseI CAYNNNNRTG 1 cut(s) 525
SacI GAGCTC 1 cut(s) 1940
SacII CCGCGG 1 cut(s) 438
SalI GTCGAC 1 cut(s) 206
SaqAI TTAA 8 cut(s) 935, 1155, 1355, 1581, 1626, 1722, 1752, 2054
Sau3AI GATC 7 cut(s) 52, 192, 266, 916, 1050, 1262, 1902
Sau96I GGNCC 2 cut(s) 471, 2033
SchI GAGTC 5 cut(s) 300, 767, 844, 894, 1195
ScrFI CCNGG 5 cut(s) 34, 187, 203, 262, 847
SduI GDGCHC 4 cut(s) 1080, 1102, 1940, 1964
SfaNI GCATC 6 cut(s) 319, 883, 977, 1196, 1384, 2054
Sfr303I CCGCGG 1 cut(s) 438
SgrBI CCGCGG 1 cut(s) 438
SinI GGWCC 1 cut(s) 2033
SmiMI CAYNNNNRTG 1 cut(s) 525
SmlI CTYRAG 3 cut(s) 768, 1241, 1368
SmoI CTYRAG 3 cut(s) 768, 1241, 1368
SphI GCATGC 1 cut(s) 698
SsiI CCGC 9 cut(s) 48, 120, 133, 213, 435, 437, 440, 804, 966
SspMI CTAG 2 cut(s) 837, 2067
SstI GAGCTC 1 cut(s) 1940
StyD4I CCNGG 5 cut(s) 32, 185, 201, 260, 845
StyI CCWWGG 5 cut(s) 228, 706, 836, 1977, 2022
TaaI ACNGT 2 cut(s) 1255, 1757
TaiI ACGT 5 cut(s) 117, 252, 1099, 2043, 2077
TaqI TCGA 5 cut(s) 207, 240, 462, 600, 1204
TatI WGTACW 1 cut(s) 1495
TauI GCSGC 4 cut(s) 50, 123, 135, 440
TfiI GAWTC 5 cut(s) 89, 1217, 1328, 1673, 1970
Tru1I TTAA 8 cut(s) 935, 1155, 1355, 1581, 1626, 1722, 1752, 2054
Tru9I TTAA 8 cut(s) 935, 1155, 1355, 1581, 1626, 1722, 1752, 2054
TscAI CASTG 5 cut(s) 290, 321, 795, 1254, 1380
TseFI GTSAC 6 cut(s) 107, 145, 250, 590, 700, 1307
TseI GCWGC 9 cut(s) 20, 394, 449, 691, 1057, 1397, 1460, 1864, 2027
Tsp45I GTSAC 6 cut(s) 107, 145, 250, 590, 700, 1307
TspDTI ATGAA 4 cut(s) 328, 497, 1417, 1877
TspGWI ACGGA 3 cut(s) 95, 259, 622
TspRI CASTG 5 cut(s) 290, 321, 795, 1254, 1380
VpaK11BI GGWCC 1 cut(s) 2033
XapI RAATTY 2 cut(s) 1279, 1316
XceI RCATGY 4 cut(s) 698, 959, 1037, 1854
XmaJI CCTAGG 1 cut(s) 836
XmiI GTMKAC 2 cut(s) 207, 273
XspI CTAG 2 cut(s) 837, 2067
ZraI GACGTC 1 cut(s) 250
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.