Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0009233

Physical Location & Seq

Genomic Coordinates Forward (+)

376251 .. 379215

Gene Structure 2965 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1001000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1998 bp

ATGGTCATCAACGACAGACCTTCCAAGCGCGCCAGGAGGAGGGTCACCGCCGATCTCCCCGACTTTTTCACCTTCCCCTTCCCCCAAAACCACGAGGTCGAGCCCCTGCCCTTCCGCGACAGCGTTCGCCGCTTCCTCATTCACCACGCGCATGTCACGTGCCCATCCTCCTCGCTGTTCCCTTCCCTGGTGACGTCGCAGATCTCGCTCCGGCTCGGGCATCCGGGCGACCCGACCGCCGTGCTTCCCTTGGACGTGGTGGAGGAGGATGTCACCCGCTCCAGACGATCCGTCTACTGCGACCAGTGCCGAGTCGTTGGTTGGAGTGGGCATCCGGTGTGCAAGAAGCGGTACCACTTCATAATAAGAAGAGGGGCTGAGAGCGGTGAGAATGAGCAGATGCAGAGAAGCGGCGGCAGCAAGTGGTGCAACTCTATTAGTGCCACCACCACGACTGCAGAGATGGATGCTGTGGAAGAGTGGGCGTATCTTCAGCTTCATGACAACGCCCACCTCCTCCACGCCGTCATTCACTCCAATGGCTTCGCCCACCTTCTCACCCTCAACGGTAGACAAGGCGGCTCCGCCATTCTCTCTGGCCGTCACATTTTGGACTTTTGGGATAGGCTATGTCTAGCCCTCTCCGTCAGGAAAGTTAGTGTGATGGATGTGTCCAAGAAGTACGGCATGGAGTACCGAATGCTGCACGCTGTCACCAGCGGCCGTTCTTGGTATGGCAATTGGGGTTATGAATTTGGTGCTGGGAGCTATGCTCTCACTCAACATTCTTACCAAAAAGCAGTGGATACCCTGTCCAGCTTGCCCCTAGACCCTTTTCTATTCCAACCAAGGAAACCCCGGACTCGCCTCCAGTCTGTTATTGCCTTTTACCAATCTTTATCCAATATCCAACTCCTAACAATCAAGGATCTTTTTACGTTTATGCTGAGTCTCATCCATAGAGCCCGTGTGCATACATCATCTAACACGAAACCCGAGCAGCAGTACCCTTCCAATGCTTTATGTGCGTGGACGGCCAATGATGTCGAACATGTGCAGCAAGCGATGATCAAGGTGCTGCTTGCAGCATTTGGTACTGGCGGGGTTAGCTGGGTGTCAAAACGAGCTCTCAGGGGTGCATTGTACAAGAATTCCTCTCTGGAGCTTCTTGATTACTGCCTTAAACACCTAGGAGGGAAGTTGGCACCCAATGGTATGGTAGTTAAGGCCCGATGTAGTCCCGCTTCAGTTGACGTAGAATACAGGCTTGAGTCATCAAGTGTTCAAAATGTTGATGGATACGAGTCCGATTTGAATTTTCCATCAGAAGAGCAAATCCTTTGTGACCTCAAATTTTTATATGATTCCATTCTCCACCCTGACACCATGCTAAGCCATACACCTCAAGTGATGAGGGAACGCATTATCGATGCAGCAACTAAGCTTCTTGATTGCAAGCAATTCGTGAAGGACTATAAGCCTTATAAAATGGCAGAGGAAAGCTCCTTTGGGATTCACCTCTGGTGTCACGTAGCGCTTTCAGACGAGTCCAAGGATGATTTTGTCCTGCCTCCGGAACTAATTGTCTTGCCCTTGAGTGCGACAGTTGCTGACCTTAAAAAGGAAGCCACCACAGCATTTCAGGAAGTATATGCCATGTTCAAGAGGTTTGAAGTAGAGGAATTGCTTGGATATGGCTCCATAAAGGATTCATTTACAGTAAAACTTCTGCTTGGATCATGTGGCTCAATTCCATTGAAAGGGAGATGCCCTGCTAAACATGGGCTGAACCGTTTCCGGATGGAGAGAGGACTTGAAAGCTGGACCGTTGATTGCACATGTGGGGCCAAGGATGACGACGGGGAGAGAATGTTGGCTTGTGATACATGTGGTGTTTGGCAGCACACCAGGTGTGCCGGGATTCATAGCTCTGATGAGATGCCTGCAAAGTTTGTTTGCATGAGATGTGTGAGCCAAGAAAGCCCAAAACACCCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PHD

Protein Analysis

666

Amino Acids

74.82

Weight (kDa)

7.99

Isoelectric Point (pI)

42.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WHD_plant_repro	PF25874	344 - 425	2.4e-08	Winged helix-turn-helix domain in plant reproductive proteins
Ubiquitin_At1g33420	PF25565	504 - 590	5.7e-29	At1g33420-like, ubiquitin-like domain
PHD	PF00628	612 - 656	1e-07	PHD-finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009233)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G33420 AT1G33420
fragaria_vesca	FvH4_2g00220 FvH4_2g00220
malus_domestica	MD05G1001000.v1.1 MD10G1001100.v1.1 MD10G1001300.v1.1
prunus_persica	Prupe.8G002100_v2.0.a1
pyrus_communis	pycom05g00030 pycom10g00120
rosa_chinensis	RchiOBHm_Chr6g0249511
rosa_laevigata	RLG00000015574
rosa_multiflora	Rmu_co8352193.1_g000001 Rmu_sc0022339.1_g000001 Rmu_ssc0000407.1_g000008
rosa_roxburghii	Rroxscaffold_7G00217610
rosa_rugosa	Rorug05G0493100
rosa_samantha	Rh6AG002800 Rh6BG007300 Rh6CG001800 Rh6DG001800
rosa_wichuraiana	Rw6G000320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1485
AatII	GACGTC	1 cut(s)	197
Acc65I	GGTACC	1 cut(s)	351
AccB1I	GGYRCC	2 cut(s)	351, 1204
AccBSI	CCGCTC	2 cut(s)	279, 384
AccI	GTMKAC	2 cut(s)	294, 571
AccII	CGCG	3 cut(s)	30, 117, 149
AccIII	TCCGGA	2 cut(s)	1573, 1797
AclWI	GGATC	3 cut(s)	282, 936, 1744
AcoI	YGGCCR	3 cut(s)	598, 721, 1035
AcsI	RAATTY	4 cut(s)	752, 1150, 1315, 1352
AcuI	CTGAAG	2 cut(s)	476, 1230
AcvI	CACGTG	1 cut(s)	159
AcyI	GRCGYC	1 cut(s)	194
AdeI	CACNNNGTG	1 cut(s)	1911
AfaI	GTAC	6 cut(s)	353, 683, 695, 1007, 1096, 1145
AfeI	AGCGCT	1 cut(s)	1536
AfiI	CCNNNNNNNGG	5 cut(s)	39, 187, 1573, 1621, 1760
AflIII	ACRYGT	3 cut(s)	1051, 1838, 1886
AgsI	TTSAA	6 cut(s)	1286, 1315, 1663, 1673, 1759, 1817
AhdI	GACNNNNNGTC	1 cut(s)	290
AjiI	CACGTC	1 cut(s)	256
AjnI	CCWGG	3 cut(s)	32, 186, 1907
AjuI	GAANNNNNNNTTGG	2 cut(s)	1491, 1523
Alw21I	GWGCWC	1 cut(s)	1129
Alw26I	GTCTC	1 cut(s)	956
AlwI	GGATC	3 cut(s)	282, 936, 1744
AlwNI	CAGNNNCTG	1 cut(s)	1610
Ama87I	CYCGRG	2 cut(s)	215, 995
Aor13HI	TCCGGA	2 cut(s)	1573, 1797
Aor51HI	AGCGCT	1 cut(s)	1536
AoxI	GGCC	5 cut(s)	598, 721, 1035, 1227, 1845
ApeKI	GCWGC	8 cut(s)	417, 703, 1000, 1057, 1078, 1085, 1433, 1900
ApoI	RAATTY	4 cut(s)	752, 1150, 1315, 1352
Asp700I	GAANNNNTTC	1 cut(s)	1793
Asp718I	GGTACC	1 cut(s)	351
AspA2I	CCTAGG	1 cut(s)	1189
AspLEI	GCGC	4 cut(s)	30, 32, 151, 1537
AspS9I	GGNCC	3 cut(s)	1228, 1824, 1845
AsuC2I	CCSGG	3 cut(s)	225, 859, 1918
AsuHPI	GGTGA	9 cut(s)	37, 61, 134, 202, 265, 398, 550, 706, 1508
AvaI	CYCGRG	2 cut(s)	215, 995
AvaII	GGWCC	1 cut(s)	1824
AvrII	CCTAGG	1 cut(s)	1189
BaeGI	GKGCMC	1 cut(s)	164
BanI	GGYRCC	2 cut(s)	351, 1204
BanII	GRGCYC	3 cut(s)	105, 967, 1129
BarI	GAAGNNNNNNTAC	2 cut(s)	1228, 1260
BauI	CACGAG	1 cut(s)	92
BbrPI	CACGTG	1 cut(s)	159
Bbv12I	GWGCWC	1 cut(s)	1129
BbvI	GCAGC	8 cut(s)	429, 690, 1012, 1065, 1069, 1097, 1445, 1912
BccI	CCATC	6 cut(s)	172, 457, 658, 1289, 1330, 1795
BceAI	ACGGC	6 cut(s)	224, 509, 585, 700, 708, 1050
BcgI	CGANNNNNNTGC	4 cut(s)	223, 257, 1444, 1478
BciT130I	CCWGG	3 cut(s)	34, 188, 1909
BciVI	GTATCC	2 cut(s)	799, 1292
BclI	TGATCA	1 cut(s)	1068
BcnI	CCSGG	3 cut(s)	225, 859, 1918
BcoDI	GTCTC	1 cut(s)	956
BfaI	CTAG	3 cut(s)	635, 827, 1190
BfmI	CTRYAG	1 cut(s)	456
BfoI	RGCGCY	1 cut(s)	1538
BfuI	GTATCC	2 cut(s)	799, 1292
BglII	AGATCT	1 cut(s)	201
BlnI	CCTAGG	1 cut(s)	1189
BlpI	GCTNAGC	1 cut(s)	1391
Bme1390I	CCNGG	6 cut(s)	34, 188, 225, 859, 1909, 1918
Bme18I	GGWCC	1 cut(s)	1824
BmeRI	GACNNNNNGTC	1 cut(s)	290
BmeT110I	CYCGRG	2 cut(s)	215, 995
BmgBI	CACGTC	1 cut(s)	256
BmgT120I	GGNCC	3 cut(s)	1228, 1824, 1845
BmiI	GGNNCC	5 cut(s)	353, 583, 1206, 1699, 1846
BmrFI	CCNGG	6 cut(s)	34, 188, 225, 859, 1909, 1918
BmsI	GCATC	7 cut(s)	229, 340, 390, 457, 1420, 1757, 1929
BplI	GAGNNNNNCTC	4 cut(s)	757, 789, 1487, 1519
BpmI	CTGGAG	3 cut(s)	265, 854, 1181
Bpu1102I	GCTNAGC	1 cut(s)	1391
BpuEI	CTTGAG	3 cut(s)	1289, 1389, 1615
BpuMI	CCSGG	3 cut(s)	225, 859, 1918
Bsa29I	ATCGAT	1 cut(s)	1428
BsaAI	YACGTR	2 cut(s)	159, 1531
BsaHI	GRCGYC	1 cut(s)	194
BsaJI	CCNNGG	7 cut(s)	186, 249, 848, 857, 1189, 1551, 1848
BsaWI	WCCGGW	3 cut(s)	334, 1573, 1797
BsaXI	ACNNNNNCTCC	2 cut(s)	1856, 1886
Bsc4I	CCNNNNNNNGG	5 cut(s)	39, 187, 1573, 1621, 1760
Bse1I	ACTGG	3 cut(s)	304, 871, 1102
BseAI	TCCGGA	2 cut(s)	1573, 1797
BseBI	CCWGG	3 cut(s)	34, 188, 1909
BseCI	ATCGAT	1 cut(s)	1428
BseDI	CCNNGG	7 cut(s)	186, 249, 848, 857, 1189, 1551, 1848
BseLI	CCNNNNNNNGG	5 cut(s)	39, 187, 1573, 1621, 1760
BseMII	CTCAG	3 cut(s)	369, 938, 1144
BseNI	ACTGG	3 cut(s)	304, 871, 1102
BsePI	GCGCGC	1 cut(s)	28
BseRI	GAGGAG	4 cut(s)	52, 160, 278, 506
BseSI	GKGCMC	1 cut(s)	164
BseX3I	CGGCCG	1 cut(s)	721
BseXI	GCAGC	8 cut(s)	429, 690, 1012, 1065, 1069, 1097, 1445, 1912
BseYI	CCCAGC	2 cut(s)	761, 1110
BsgI	GTGCAG	2 cut(s)	689, 1076
Bsh1236I	CGCG	3 cut(s)	30, 117, 149
Bsh1285I	CGRYCG	2 cut(s)	237, 724
BshFI	GGCC	5 cut(s)	600, 723, 1037, 1229, 1847
BshNI	GGYRCC	2 cut(s)	351, 1204
BshVI	ATCGAT	1 cut(s)	1428
BsiEI	CGRYCG	2 cut(s)	237, 724
BsiHKAI	GWGCWC	1 cut(s)	1129
BsiHKCI	CYCGRG	2 cut(s)	215, 995
BsiSI	CCGG	7 cut(s)	211, 224, 335, 859, 1574, 1798, 1917
BslFI	GGGAC	1 cut(s)	1224
BslI	CCNNNNNNNGG	5 cut(s)	39, 187, 1573, 1621, 1760
BsmAI	GTCTC	1 cut(s)	956
BsmFI	GGGAC	1 cut(s)	1224
BsmI	GAATGC	1 cut(s)	705
BsnI	GGCC	5 cut(s)	600, 723, 1037, 1229, 1847
BsoBI	CYCGRG	2 cut(s)	215, 995
Bsp1286I	GDGCHC	4 cut(s)	105, 164, 967, 1129
Bsp13I	TCCGGA	2 cut(s)	1573, 1797
Bsp1407I	TGTACA	1 cut(s)	1143
Bsp143I	GATC	6 cut(s)	52, 201, 287, 928, 1068, 1736
Bsp1720I	GCTNAGC	1 cut(s)	1391
BspANI	GGCC	5 cut(s)	600, 723, 1037, 1229, 1847
BspCNI	CTCAG	3 cut(s)	370, 939, 1143
BspDI	ATCGAT	1 cut(s)	1428
BspEI	TCCGGA	2 cut(s)	1573, 1797
BspFNI	CGCG	3 cut(s)	30, 117, 149
BspHI	TCATGA	1 cut(s)	499
BspLI	GGNNCC	5 cut(s)	353, 583, 1206, 1699, 1846
BspMAI	CTGCAG	1 cut(s)	460
BspPI	GGATC	3 cut(s)	282, 936, 1744
BspQI	GCTCTTC	1 cut(s)	1323
BspT107I	GGYRCC	2 cut(s)	351, 1204
BsrBI	CCGCTC	2 cut(s)	279, 384
BsrGI	TGTACA	1 cut(s)	1143
BsrI	ACTGG	3 cut(s)	304, 871, 1102
BssECI	CCNNGG	7 cut(s)	186, 249, 848, 857, 1189, 1551, 1848
BssHII	GCGCGC	1 cut(s)	28
BssMI	GATC	6 cut(s)	52, 201, 287, 928, 1068, 1736
BssNI	GRCGYC	1 cut(s)	194
BssSI	CACGAG	1 cut(s)	92
BssT1I	CCWWGG	5 cut(s)	249, 848, 1189, 1551, 1848
Bst2BI	CACGAG	1 cut(s)	92
Bst2UI	CCWGG	3 cut(s)	34, 188, 1909
Bst4CI	ACNGT	5 cut(s)	569, 1606, 1720, 1793, 1828
Bst6I	CTCTTC	3 cut(s)	364, 471, 1323
BstACI	GRCGYC	1 cut(s)	194
BstAPI	GCANNNNNTGC	1 cut(s)	426
BstAUI	TGTACA	1 cut(s)	1143
BstBAI	YACGTR	2 cut(s)	159, 1531
BstC8I	GCNNGC	7 cut(s)	30, 708, 821, 1062, 1083, 1457, 1944
BstDEI	CTNAG	5 cut(s)	378, 947, 1130, 1391, 1440
BstEII	GGTNACC	1 cut(s)	43
BstENI	CCTNNNNNAGG	1 cut(s)	1619
BstFNI	CGCG	3 cut(s)	30, 117, 149
BstH2I	RGCGCY	1 cut(s)	1538
BstHHI	GCGC	4 cut(s)	30, 32, 151, 1537
BstKTI	GATC	6 cut(s)	55, 204, 290, 931, 1071, 1739
BstMAI	GTCTC	1 cut(s)	956
BstMBI	GATC	6 cut(s)	52, 201, 287, 928, 1068, 1736
BstMCI	CGRYCG	2 cut(s)	237, 724
BstNI	CCWGG	3 cut(s)	34, 188, 1909
BstNSI	RCATGY	4 cut(s)	155, 1055, 1842, 1890
BstPI	GGTNACC	1 cut(s)	43
BstSCI	CCNGG	6 cut(s)	32, 186, 223, 857, 1907, 1916
BstSFI	CTRYAG	1 cut(s)	456
BstSLI	GKGCMC	1 cut(s)	164
BstUI	CGCG	3 cut(s)	30, 117, 149
BstV1I	GCAGC	8 cut(s)	429, 690, 1012, 1065, 1069, 1097, 1445, 1912
BstX2I	RGATCY	2 cut(s)	201, 928
BstXI	CCANNNNNNTGG	1 cut(s)	1216
BstYI	RGATCY	2 cut(s)	201, 928
BstZI	CGGCCG	1 cut(s)	721
Bsu15I	ATCGAT	1 cut(s)	1428
BsuI	GTATCC	2 cut(s)	799, 1292
BsuRI	GGCC	5 cut(s)	600, 723, 1037, 1229, 1847
BsuTUI	ATCGAT	1 cut(s)	1428
BtgZI	GCGATG	1 cut(s)	1079
BtrI	CACGTC	1 cut(s)	256
BtsI	GCAGTG	1 cut(s)	807
BtsIMutI	CAGTG	2 cut(s)	311, 807
Cac8I	GCNNGC	7 cut(s)	30, 708, 821, 1062, 1083, 1457, 1944
CaiI	CAGNNNCTG	1 cut(s)	1610
CciI	TCATGA	1 cut(s)	499
CfoI	GCGC	4 cut(s)	30, 32, 151, 1537
Cfr13I	GGNCC	3 cut(s)	1228, 1824, 1845
ClaI	ATCGAT	1 cut(s)	1428
CsiI	ACCWGGT	1 cut(s)	1907
Csp6I	GTAC	6 cut(s)	352, 682, 694, 1006, 1095, 1144
CviQI	GTAC	6 cut(s)	352, 682, 694, 1006, 1095, 1144
DdeI	CTNAG	5 cut(s)	378, 947, 1130, 1391, 1440
DpnI	GATC	6 cut(s)	54, 203, 289, 930, 1070, 1738
DpnII	GATC	6 cut(s)	52, 201, 287, 928, 1068, 1736
DraIII	CACNNNGTG	1 cut(s)	1911
DriI	GACNNNNNGTC	1 cut(s)	290
EaeI	YGGCCR	3 cut(s)	598, 721, 1035
EagI	CGGCCG	1 cut(s)	721
Eam1104I	CTCTTC	3 cut(s)	364, 471, 1323
Eam1105I	GACNNNNNGTC	1 cut(s)	290
EarI	CTCTTC	3 cut(s)	364, 471, 1323
EciI	GGCGGA	1 cut(s)	574
Ecl136II	GAGCTC	1 cut(s)	1127
EclXI	CGGCCG	1 cut(s)	721
Eco130I	CCWWGG	5 cut(s)	249, 848, 1189, 1551, 1848
Eco24I	GRGCYC	3 cut(s)	105, 967, 1129
Eco47I	GGWCC	1 cut(s)	1824
Eco47III	AGCGCT	1 cut(s)	1536
Eco52I	CGGCCG	1 cut(s)	721
Eco53kI	GAGCTC	1 cut(s)	1127
Eco57I	CTGAAG	2 cut(s)	476, 1230
Eco72I	CACGTG	1 cut(s)	159
Eco88I	CYCGRG	2 cut(s)	215, 995
Eco91I	GGTNACC	1 cut(s)	43
EcoICRI	GAGCTC	1 cut(s)	1127
EcoNI	CCTNNNNNAGG	1 cut(s)	1619
EcoO65I	GGTNACC	1 cut(s)	43
EcoRI	GAATTC	1 cut(s)	1150
EcoRII	CCWGG	3 cut(s)	32, 186, 1907
EcoT14I	CCWWGG	5 cut(s)	249, 848, 1189, 1551, 1848
EcoT38I	GRGCYC	3 cut(s)	105, 967, 1129
ErhI	CCWWGG	5 cut(s)	249, 848, 1189, 1551, 1848
FaqI	GGGAC	1 cut(s)	1224
FauI	CCCGC	3 cut(s)	284, 1094, 1249
FbaI	TGATCA	1 cut(s)	1068
FblI	GTMKAC	2 cut(s)	294, 571
FriOI	GRGCYC	3 cut(s)	105, 967, 1129
FspBI	CTAG	3 cut(s)	635, 827, 1190
GlaI	GCGC	4 cut(s)	29, 31, 150, 1536
GsaI	CCCAGC	2 cut(s)	765, 1114
GsuI	CTGGAG	3 cut(s)	265, 854, 1181
HaeII	RGCGCY	1 cut(s)	1538
HaeIII	GGCC	5 cut(s)	600, 723, 1037, 1229, 1847
HapII	CCGG	7 cut(s)	211, 224, 335, 859, 1574, 1798, 1917
HhaI	GCGC	4 cut(s)	30, 32, 151, 1537
Hin1I	GRCGYC	1 cut(s)	194
Hin6I	GCGC	4 cut(s)	28, 30, 149, 1535
HinP1I	GCGC	4 cut(s)	28, 30, 149, 1535
HincII	GTYRAC	1 cut(s)	1252
HindII	GTYRAC	1 cut(s)	1252
HindIII	AAGCTT	1 cut(s)	1442
HpaII	CCGG	7 cut(s)	211, 224, 335, 859, 1574, 1798, 1917
HphI	GGTGA	9 cut(s)	37, 61, 134, 202, 265, 398, 550, 706, 1508
Hpy166II	GTNNAC	4 cut(s)	295, 572, 1032, 1252
Hpy188I	TCNGA	4 cut(s)	1309, 1327, 1543, 1933
Hpy8I	GTNNAC	4 cut(s)	295, 572, 1032, 1252
Hpy99I	CGWCG	2 cut(s)	199, 1862
HpyAV	CCTTC	8 cut(s)	30, 82, 88, 121, 192, 563, 1020, 1462
HpyCH4III	ACNGT	5 cut(s)	569, 1606, 1720, 1793, 1828
HpyCH4IV	ACGT	6 cut(s)	158, 194, 255, 938, 1254, 1530
HpyF3I	CTNAG	5 cut(s)	378, 947, 1130, 1391, 1440
HpySE526I	ACGT	6 cut(s)	158, 194, 255, 938, 1254, 1530
Hsp92I	GRCGYC	1 cut(s)	194
HspAI	GCGC	4 cut(s)	28, 30, 149, 1535
Kpn2I	TCCGGA	2 cut(s)	1573, 1797
KpnI	GGTACC	1 cut(s)	355
Ksp22I	TGATCA	1 cut(s)	1068
Kzo9I	GATC	6 cut(s)	52, 201, 287, 928, 1068, 1736
LguI	GCTCTTC	1 cut(s)	1323
LmnI	GCTCC	7 cut(s)	213, 284, 587, 765, 1162, 1508, 1703
Lsp1109I	GCAGC	8 cut(s)	429, 690, 1012, 1065, 1069, 1097, 1445, 1912
LweI	GCATC	7 cut(s)	229, 340, 390, 457, 1420, 1757, 1929
MabI	ACCWGGT	1 cut(s)	1907
MaeI	CTAG	3 cut(s)	635, 827, 1190
MaeII	ACGT	6 cut(s)	158, 194, 255, 938, 1254, 1530
MaeIII	GTNAC	8 cut(s)	43, 154, 190, 271, 602, 712, 1343, 1526
MalI	GATC	6 cut(s)	54, 203, 289, 930, 1070, 1738
MbiI	CCGCTC	2 cut(s)	279, 384
MboI	GATC	6 cut(s)	52, 201, 287, 928, 1068, 1736
MboII	GAAGA	4 cut(s)	381, 482, 488, 1340
MfeI	CAATTG	1 cut(s)	739
MflI	RGATCY	2 cut(s)	201, 928
MhlI	GDGCHC	4 cut(s)	105, 164, 967, 1129
MluCI	AATT	9 cut(s)	739, 752, 1150, 1315, 1352, 1460, 1581, 1682, 1749
MlyI	GAGTC	6 cut(s)	321, 856, 958, 1280, 1313, 1556
MmeI	TCCRAC	3 cut(s)	302, 868, 934
MroI	TCCGGA	2 cut(s)	1573, 1797
MroXI	GAANNNNTTC	1 cut(s)	1793
MseI	TTAA	3 cut(s)	1182, 1224, 1617
MslI	CAYNNNNRTG	2 cut(s)	150, 537
MspA1I	CMGCKG	1 cut(s)	720
MspI	CCGG	7 cut(s)	211, 224, 335, 859, 1574, 1798, 1917
MspR9I	CCNGG	6 cut(s)	34, 188, 225, 859, 1909, 1918
MunI	CAATTG	1 cut(s)	739
Mva1269I	GAATGC	1 cut(s)	705
MvaI	CCWGG	3 cut(s)	34, 188, 1909
MvnI	CGCG	3 cut(s)	30, 117, 149
NciI	CCSGG	3 cut(s)	225, 859, 1918
NdeII	GATC	6 cut(s)	52, 201, 287, 928, 1068, 1736
NlaIV	GGNNCC	5 cut(s)	353, 583, 1206, 1699, 1846
NmeAIII	GCCGAG	1 cut(s)	335
NmuCI	GTSAC	8 cut(s)	43, 154, 190, 271, 602, 712, 1343, 1526
NspI	RCATGY	4 cut(s)	155, 1055, 1842, 1890
PagI	TCATGA	1 cut(s)	499
PauI	GCGCGC	1 cut(s)	28
PciI	ACATGT	3 cut(s)	1051, 1838, 1886
PciSI	GCTCTTC	1 cut(s)	1323
PctI	GAATGC	1 cut(s)	705
PdmI	GAANNNNTTC	1 cut(s)	1793
PfeI	GAWTC	4 cut(s)	1364, 1513, 1709, 1921
PleI	GAGTC	6 cut(s)	320, 856, 957, 1279, 1312, 1555
PmaCI	CACGTG	1 cut(s)	159
PmlI	CACGTG	1 cut(s)	159
PpsI	GAGTC	6 cut(s)	320, 856, 957, 1279, 1312, 1555
Ppu21I	YACGTR	2 cut(s)	159, 1531
PscI	ACATGT	3 cut(s)	1051, 1838, 1886
PsiI	TTATAA	1 cut(s)	1485
Psp124BI	GAGCTC	1 cut(s)	1129
Psp6I	CCWGG	3 cut(s)	32, 186, 1907
PspCI	CACGTG	1 cut(s)	159
PspEI	GGTNACC	1 cut(s)	43
PspFI	CCCAGC	2 cut(s)	761, 1110
PspGI	CCWGG	3 cut(s)	32, 186, 1907
PspN4I	GGNNCC	5 cut(s)	353, 583, 1206, 1699, 1846
PspPI	GGNCC	3 cut(s)	1228, 1824, 1845
PstI	CTGCAG	1 cut(s)	460
PstNI	CAGNNNCTG	1 cut(s)	1610
PsuI	RGATCY	2 cut(s)	201, 928
PteI	GCGCGC	1 cut(s)	28
RsaI	GTAC	6 cut(s)	353, 683, 695, 1007, 1096, 1145
RsaNI	GTAC	6 cut(s)	352, 682, 694, 1006, 1095, 1144
RseI	CAYNNNNRTG	2 cut(s)	150, 537
SacI	GAGCTC	1 cut(s)	1129
SapI	GCTCTTC	1 cut(s)	1323
SaqAI	TTAA	3 cut(s)	1182, 1224, 1617
Sau3AI	GATC	6 cut(s)	52, 201, 287, 928, 1068, 1736
Sau96I	GGNCC	3 cut(s)	1228, 1824, 1845
SchI	GAGTC	6 cut(s)	321, 856, 958, 1280, 1313, 1556
ScrFI	CCNGG	6 cut(s)	34, 188, 225, 859, 1909, 1918
SduI	GDGCHC	4 cut(s)	105, 164, 967, 1129
SexAI	ACCWGGT	1 cut(s)	1907
SfaNI	GCATC	7 cut(s)	229, 340, 390, 457, 1420, 1757, 1929
SfcI	CTRYAG	1 cut(s)	456
SinI	GGWCC	1 cut(s)	1824
SmiMI	CAYNNNNRTG	2 cut(s)	150, 537
SmlI	CTYRAG	3 cut(s)	1268, 1404, 1594
SmoI	CTYRAG	3 cut(s)	1268, 1404, 1594
Sse9I	AATT	9 cut(s)	739, 752, 1150, 1315, 1352, 1460, 1581, 1682, 1749
SspMI	CTAG	3 cut(s)	635, 827, 1190
SstI	GAGCTC	1 cut(s)	1129
StyD4I	CCNGG	6 cut(s)	32, 186, 223, 857, 1907, 1916
StyI	CCWWGG	5 cut(s)	249, 848, 1189, 1551, 1848
TaaI	ACNGT	5 cut(s)	569, 1606, 1720, 1793, 1828
TaiI	ACGT	6 cut(s)	161, 197, 258, 941, 1257, 1533
TaqI	TCGA	3 cut(s)	99, 1047, 1428
TasI	AATT	9 cut(s)	739, 752, 1150, 1315, 1352, 1460, 1581, 1682, 1749
TatI	WGTACW	1 cut(s)	1143
TauI	GCSGC	5 cut(s)	132, 414, 417, 582, 723
TfiI	GAWTC	4 cut(s)	1364, 1513, 1709, 1921
Tru1I	TTAA	3 cut(s)	1182, 1224, 1617
Tru9I	TTAA	3 cut(s)	1182, 1224, 1617
TscAI	CASTG	2 cut(s)	311, 807
TseFI	GTSAC	8 cut(s)	43, 154, 190, 271, 602, 712, 1343, 1526
TseI	GCWGC	8 cut(s)	417, 703, 1000, 1057, 1078, 1085, 1433, 1900
Tsp45I	GTSAC	8 cut(s)	43, 154, 190, 271, 602, 712, 1343, 1526
TspDTI	ATGAA	5 cut(s)	349, 488, 765, 1701, 1913
TspGWI	ACGGA	2 cut(s)	280, 634
TspRI	CASTG	2 cut(s)	311, 807
VpaK11BI	GGWCC	1 cut(s)	1824
XagI	CCTNNNNNAGG	1 cut(s)	1619
XapI	RAATTY	4 cut(s)	752, 1150, 1315, 1352
XceI	RCATGY	4 cut(s)	155, 1055, 1842, 1890
XmaJI	CCTAGG	1 cut(s)	1189
XmiI	GTMKAC	2 cut(s)	294, 571
XmnI	GAANNNNTTC	1 cut(s)	1793
XspI	CTAG	3 cut(s)	635, 827, 1190
ZraI	GACGTC	1 cut(s)	195

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.