Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0009233

Physical Location & Seq

Genomic Coordinates Forward (+)

314565 .. 318751

Gene Structure 4187 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g00220.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2097 bp

ATGGTTGTGAACGAGAGGCCTTCCAAGAGAGCCAGGCGGCGGGTTTTCGCCGATCTGCCCGACCTCTTCACCTTCCCTCCTCCTCCTCCTCCTGACTCTCCCGAAGCCTTCCGTGACAACGTGCGCGGCTTTCTCGGCCGCCACGCGCGCGTCACGCTCCCGTCTTCCTCTCTCTTCCCCTCCCTGCTGACCTGGCAGATCGCCCTCCGGGTCGACCCCGCCGTCGTCCTTCCCTTGGATATCGTCGAGGAGGACGTCACGCGCTCCCGGCGATCCGTCTACTGCGACCAGTGCCGAGTCGTTGGTTGGAGTGGGCATCCTGTTTGCCGAAAGCGATATCACTTCATTATTAGAAGCAACGCTGAGAGCTGTGATAGTGAGACTCCCTTCCAGTTCCAGCAGCCGCCACAGCAAGAGAAGTGGTGCAACTCTATTAGTGCCACCGGGGCGGAGGACACGGCCGATGATGTTGAAGAGTGGGCCTATAACCAATTGCATGACAACACTCATCTTCTTCATGCTGTCATCCACTCCAATGGCTTCGCCCATCTTCTTACCCTCAATGGCAGACAAGGAGGCTCCACCTCTCTCTCCGGCCGTCACATTATGGACTTGTGGGATAGGCTCTGTCTAGCCCTCTCCGTCAGGAAGGTCAGTGTGATGGATGTATCAAAAAAGTATGGGATGGAGTACAGATTGCTGCATGCAGTCACCCATGGCCGCTCTTGGTATGGAAATTGGGGTTATGAATTTCGATGTGGGAGCTATGCTCTCACACAAGACTCATACCACAAAGCAGTGGAAACCATCTCCATCTTGCCCCTACACCCTTTCCAATTCCAGCCTAGGAAACCCAGGACTCGCCTGCAAGCTGTCATTGCCTTTTACCAATCTTTCTCCAATGCCCAACTCCAAACAACAAAAGATCTTTTTACATTTATGTTTAGTCTAATTCCTAAGCCCCGTGGACCTACTTCATCCAAGAAACTCAACCTTGACACTTACAATATTTTGTGCGTGTGGACAGCCAACGATGTCCAACATGTGCAACAAGCTATGATCAAGCTGCTTTCAGCAGTTCGTGAGCCCAATTGGGTGTCAAAACGTGCTCTCAAGGGTGCATTATACAAAACTTTCTCCGCAGAGCTTCTTGATTACTCCCTTAAACACTTGGGAGGTCAGTTGGTAGCTAATAACATGGTAGTTGAAACTAGATGCAATCCCGATTCTACCGGTGTTGAATACAGACTTGAGCCATTTGCTATTGGAAGATCTGAGTTCAAGCCAAATTTTCCATCCGAACAGCAAATCCTTGGTGACCTCAAATTTTTGTATGATTCCATTCTCCACCCTGACACCATGCTATGCTATGCACCTCAAGAGATGAGGGATAATGTTATTGATGCAGCAACTAAGCTTCTTGATTGCAAGCAATTTATCAAGGACTACAAGCCTGATACAATTGAAGCAGCACACCTTTCTCGTATTCACCTCTGGTGTGATGTGCAGCTTTCAGACCACCTAAAAGATGATTTTGTCCTGCCTCCAGAACTAGTTGTTTTGCCTCTGAATGCAACTCTTGCCGATCTTAAAAGTGAAGCTACCAAAGCCTTTCAGGAAGTATATGCCATGTTTAAAAGGTTTGAAGTGGAGGAGTTGCTTGAATGTGGCTCTATAAATGATTCAATTACAGCAAAACTGCTGTTTGGAACAAGTGGCACAGTTCATTTGAAAGGGAAATGCCCGGCAAAACATGGTCTTAACCGATTCCGGATGGAGAGAGGAATTGAAAGCTGGATTGTTGATTGCACATGTGGGACGAAGGATGATGATGGGGAGAGAATGATGGCTTGTGATACATGTGGTGTTTGGCAGCACACGAGGTGTGCTGGCATTCGTTGCTCTGATGAGATCCCTGCGAAGTTTGTTTGCCTGAGATGTATGAGCTCATACCAGGAGAAAAGCCATAGCAACTGTGATTCTGCCAAGGACGCTAATTATGTTCCTGTGACTAACACAACTTGCAGAGCCAAGGCAGTCAGGGCAGATGGTCGAGGTGTAGCTTCTAACCTGAATATGACTTCTAGTGTACGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PHD

Protein Analysis

699

Amino Acids

79.02

Weight (kDa)

8.08

Isoelectric Point (pI)

42.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WHD_plant_repro	PF25874	341 - 418	1.6e-10	Winged helix-turn-helix domain in plant reproductive proteins
Ubiquitin_At1g33420	PF25565	495 - 581	4.7e-27	At1g33420-like, ubiquitin-like domain
PHD	PF00628	603 - 647	4e-06	PHD-finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009233)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G33420 AT1G33420
fragaria_vesca	FvH4_2g00220 FvH4_2g00220
malus_domestica	MD05G1001000.v1.1 MD10G1001100.v1.1 MD10G1001300.v1.1
prunus_persica	Prupe.8G002100_v2.0.a1
pyrus_communis	pycom05g00030 pycom10g00120
rosa_chinensis	RchiOBHm_Chr6g0249511
rosa_laevigata	RLG00000015574
rosa_multiflora	Rmu_co8352193.1_g000001 Rmu_sc0022339.1_g000001 Rmu_ssc0000407.1_g000008
rosa_roxburghii	Rroxscaffold_7G00217610
rosa_rugosa	Rorug05G0493100
rosa_samantha	Rh6AG002800 Rh6BG007300 Rh6CG001800 Rh6DG001800
rosa_wichuraiana	Rw6G000320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	221
AatII	GACGTC	1 cut(s)	258
AccBSI	CCGCTC	1 cut(s)	723
AccI	GTMKAC	2 cut(s)	213, 279
AccII	CGCG	5 cut(s)	126, 146, 148, 150, 262
AccIII	TCCGGA	1 cut(s)	1770
AciI	CCGC	9 cut(s)	37, 40, 126, 139, 219, 404, 449, 721, 1140
AclWI	GGATC	2 cut(s)	267, 1906
AcoI	YGGCCR	4 cut(s)	136, 459, 595, 718
AcsI	RAATTY	3 cut(s)	749, 1288, 1325
AcyI	GRCGYC	1 cut(s)	255
AdeI	CACNNNGTG	1 cut(s)	1884
AfaI	GTAC	2 cut(s)	692, 2091
AfiI	CCNNNNNNNGG	2 cut(s)	39, 235
AflIII	ACRYGT	3 cut(s)	1042, 1811, 1859
AgeI	ACCGGT	1 cut(s)	1232
AhlI	ACTAGT	1 cut(s)	1552
AjnI	CCWGG	4 cut(s)	32, 191, 854, 1953
AloI	GAACNNNNNNTCC	2 cut(s)	1293, 1325
Alw21I	GWGCWC	2 cut(s)	1111, 1949
Alw26I	GTCTC	1 cut(s)	374
AlwI	GGATC	2 cut(s)	267, 1906
Aor13HI	TCCGGA	1 cut(s)	1770
AoxI	GGCC	6 cut(s)	17, 136, 459, 480, 595, 718
ApeKI	GCWGC	7 cut(s)	400, 700, 1066, 1406, 1469, 1507, 1873
ApoI	RAATTY	3 cut(s)	749, 1288, 1325
AsiGI	ACCGGT	1 cut(s)	1232
AspA2I	CCTAGG	1 cut(s)	845
AspLEI	GCGC	4 cut(s)	126, 148, 150, 264
AspS9I	GGNCC	2 cut(s)	480, 968
AsuC2I	CCSGG	4 cut(s)	209, 268, 445, 1745
AsuHPI	GGTGA	4 cut(s)	61, 703, 1328, 1481
AvaII	GGWCC	1 cut(s)	968
AvrII	CCTAGG	1 cut(s)	845
BanII	GRGCYC	2 cut(s)	1089, 1949
BauI	CACGAG	1 cut(s)	1879
BbsI	GAAGAC	1 cut(s)	156
Bbv12I	GWGCWC	2 cut(s)	1111, 1949
BbvI	GCAGC	7 cut(s)	412, 687, 1053, 1418, 1481, 1519, 1885
BceAI	ACGGC	3 cut(s)	206, 474, 582
BciT130I	CCWGG	4 cut(s)	34, 193, 856, 1955
BclI	TGATCA	1 cut(s)	1059
BcnI	CCSGG	4 cut(s)	209, 268, 445, 1745
BcoDI	GTCTC	1 cut(s)	374
BcuI	ACTAGT	1 cut(s)	1552
BfaI	CTAG	5 cut(s)	632, 846, 1212, 1553, 2085
BglI	GCCNNNNNGGC	1 cut(s)	446
BglII	AGATCT	2 cut(s)	925, 1271
BlnI	CCTAGG	1 cut(s)	845
Bme1390I	CCNGG	8 cut(s)	34, 193, 209, 268, 445, 856, 1745, 1955
Bme18I	GGWCC	1 cut(s)	968
BmgT120I	GGNCC	2 cut(s)	480, 968
BmiI	GGNNCC	1 cut(s)	580
BmrFI	CCNGG	8 cut(s)	34, 193, 209, 268, 445, 856, 1745, 1955
BmsI	GCATC	3 cut(s)	325, 1205, 1393
BpiI	GAAGAC	1 cut(s)	156
BplI	GAGNNNNNCTC	2 cut(s)	754, 786
BpmI	CTGGAG	1 cut(s)	1530
Bpu10I	CCTNAGC	1 cut(s)	957
BpuEI	CTTGAG	3 cut(s)	1097, 1271, 1362
BpuMI	CCSGG	4 cut(s)	209, 268, 445, 1745
BsaHI	GRCGYC	1 cut(s)	255
BsaJI	CCNNGG	9 cut(s)	234, 444, 715, 845, 854, 964, 1312, 1986, 2031
BsaWI	WCCGGW	2 cut(s)	1232, 1770
BsaXI	ACNNNNNCTCC	2 cut(s)	61, 91
Bsc4I	CCNNNNNNNGG	2 cut(s)	39, 235
Bse118I	RCCGGY	1 cut(s)	1232
Bse1I	ACTGG	2 cut(s)	289, 391
Bse3DI	GCAATG	1 cut(s)	876
BseAI	TCCGGA	1 cut(s)	1770
BseBI	CCWGG	4 cut(s)	34, 193, 856, 1955
BseDI	CCNNGG	9 cut(s)	234, 444, 715, 845, 854, 964, 1312, 1986, 2031
BseGI	GGATG	8 cut(s)	316, 525, 670, 690, 977, 1295, 1779, 1831
BseLI	CCNNNNNNNGG	2 cut(s)	39, 235
BseMI	GCAATG	1 cut(s)	876
BseMII	CTCAG	3 cut(s)	354, 1266, 1925
BseNI	ACTGG	2 cut(s)	289, 391
BsePI	GCGCGC	1 cut(s)	146
BseRI	GAGGAG	6 cut(s)	69, 72, 75, 78, 263, 1667
BseX3I	CGGCCG	3 cut(s)	136, 459, 595
BseXI	GCAGC	7 cut(s)	412, 687, 1053, 1418, 1481, 1519, 1885
BsgI	GTGCAG	1 cut(s)	1526
Bsh1236I	CGCG	5 cut(s)	126, 146, 148, 150, 262
Bsh1285I	CGRYCG	3 cut(s)	139, 462, 598
BshFI	GGCC	6 cut(s)	19, 138, 461, 482, 597, 720
BshTI	ACCGGT	1 cut(s)	1232
BsiEI	CGRYCG	3 cut(s)	139, 462, 598
BsiHKAI	GWGCWC	2 cut(s)	1111, 1949
BsiSI	CCGG	7 cut(s)	208, 268, 444, 594, 1233, 1745, 1771
BslFI	GGGAC	1 cut(s)	1831
BslI	CCNNNNNNNGG	2 cut(s)	39, 235
BsmAI	GTCTC	1 cut(s)	374
BsmFI	GGGAC	1 cut(s)	1831
BsmI	GAATGC	2 cut(s)	1576, 1893
BsnI	GGCC	6 cut(s)	19, 138, 461, 482, 597, 720
Bsp1286I	GDGCHC	3 cut(s)	1089, 1111, 1949
Bsp13I	TCCGGA	1 cut(s)	1770
Bsp143I	GATC	8 cut(s)	52, 198, 272, 925, 1059, 1271, 1585, 1911
Bsp19I	CCATGG	1 cut(s)	715
BspACI	CCGC	9 cut(s)	37, 40, 126, 139, 219, 404, 449, 721, 1140
BspANI	GGCC	6 cut(s)	19, 138, 461, 482, 597, 720
BspCNI	CTCAG	3 cut(s)	355, 1267, 1926
BspEI	TCCGGA	1 cut(s)	1770
BspFNI	CGCG	5 cut(s)	126, 146, 148, 150, 262
BspLI	GGNNCC	1 cut(s)	580
BspPI	GGATC	2 cut(s)	267, 1906
BsrBI	CCGCTC	1 cut(s)	723
BsrDI	GCAATG	1 cut(s)	876
BsrFI	RCCGGY	1 cut(s)	1232
BsrI	ACTGG	2 cut(s)	289, 391
BssAI	RCCGGY	1 cut(s)	1232
BssECI	CCNNGG	9 cut(s)	234, 444, 715, 845, 854, 964, 1312, 1986, 2031
BssHII	GCGCGC	1 cut(s)	146
BssMI	GATC	8 cut(s)	52, 198, 272, 925, 1059, 1271, 1585, 1911
BssNI	GRCGYC	1 cut(s)	255
BssSI	CACGAG	1 cut(s)	1879
BssT1I	CCWWGG	6 cut(s)	234, 715, 845, 1312, 1986, 2031
Bst2BI	CACGAG	1 cut(s)	1879
Bst2UI	CCWGG	4 cut(s)	34, 193, 856, 1955
Bst4CI	ACNGT	2 cut(s)	1723, 1976
Bst6I	CTCTTC	3 cut(s)	71, 179, 468
BstACI	GRCGYC	1 cut(s)	255
BstAPI	GCANNNNNTGC	2 cut(s)	1580, 1899
BstC8I	GCNNGC	6 cut(s)	148, 705, 866, 870, 1430, 1891
BstDEI	CTNAG	5 cut(s)	363, 957, 1275, 1413, 1934
BstDSI	CCRYGG	2 cut(s)	715, 964
BstEII	GGTNACC	1 cut(s)	1316
BstF5I	GGATG	8 cut(s)	316, 525, 670, 690, 977, 1295, 1779, 1831
BstFNI	CGCG	5 cut(s)	126, 146, 148, 150, 262
BstHHI	GCGC	4 cut(s)	126, 148, 150, 264
BstKTI	GATC	8 cut(s)	55, 201, 275, 928, 1062, 1274, 1588, 1914
BstMAI	GTCTC	1 cut(s)	374
BstMBI	GATC	8 cut(s)	52, 198, 272, 925, 1059, 1271, 1585, 1911
BstMCI	CGRYCG	3 cut(s)	139, 462, 598
BstNI	CCWGG	4 cut(s)	34, 193, 856, 1955
BstNSI	RCATGY	4 cut(s)	707, 1046, 1815, 1863
BstPI	GGTNACC	1 cut(s)	1316
BstSCI	CCNGG	8 cut(s)	32, 191, 207, 266, 443, 854, 1743, 1953
BstUI	CGCG	5 cut(s)	126, 146, 148, 150, 262
BstV1I	GCAGC	7 cut(s)	412, 687, 1053, 1418, 1481, 1519, 1885
BstV2I	GAAGAC	1 cut(s)	156
BstX2I	RGATCY	3 cut(s)	925, 1271, 1911
BstXI	CCANNNNNNTGG	1 cut(s)	536
BstYI	RGATCY	3 cut(s)	925, 1271, 1911
BstZI	CGGCCG	3 cut(s)	136, 459, 595
BsuRI	GGCC	6 cut(s)	19, 138, 461, 482, 597, 720
BtgI	CCRYGG	2 cut(s)	715, 964
BtsCI	GGATG	8 cut(s)	316, 525, 670, 690, 977, 1295, 1779, 1831
BtsI	GCAGTG	1 cut(s)	804
BtsIMutI	CAGTG	3 cut(s)	296, 661, 804
Cac8I	GCNNGC	6 cut(s)	148, 705, 866, 870, 1430, 1891
CfoI	GCGC	4 cut(s)	126, 148, 150, 264
Cfr10I	RCCGGY	1 cut(s)	1232
Cfr13I	GGNCC	2 cut(s)	480, 968
CseI	GACGC	2 cut(s)	139, 2000
Csp6I	GTAC	2 cut(s)	691, 2090
CspAI	ACCGGT	1 cut(s)	1232
CspCI	CAANNNNNGTGG	2 cut(s)	401, 436
CviQI	GTAC	2 cut(s)	691, 2090
DdeI	CTNAG	5 cut(s)	363, 957, 1275, 1413, 1934
DpnI	GATC	8 cut(s)	54, 200, 274, 927, 1061, 1273, 1587, 1913
DpnII	GATC	8 cut(s)	52, 198, 272, 925, 1059, 1271, 1585, 1911
DraI	TTTAAA	1 cut(s)	1636
DraIII	CACNNNGTG	1 cut(s)	1884
DrdI	GACNNNNNNGTC	1 cut(s)	221
DseDI	GACNNNNNNGTC	1 cut(s)	221
EaeI	YGGCCR	4 cut(s)	136, 459, 595, 718
EagI	CGGCCG	3 cut(s)	136, 459, 595
Eam1104I	CTCTTC	3 cut(s)	71, 179, 468
EarI	CTCTTC	3 cut(s)	71, 179, 468
EciI	GGCGGA	1 cut(s)	464
Ecl136II	GAGCTC	1 cut(s)	1947
EclXI	CGGCCG	3 cut(s)	136, 459, 595
Eco130I	CCWWGG	6 cut(s)	234, 715, 845, 1312, 1986, 2031
Eco147I	AGGCCT	1 cut(s)	19
Eco24I	GRGCYC	2 cut(s)	1089, 1949
Eco32I	GATATC	2 cut(s)	241, 338
Eco47I	GGWCC	1 cut(s)	968
Eco52I	CGGCCG	3 cut(s)	136, 459, 595
Eco53kI	GAGCTC	1 cut(s)	1947
Eco91I	GGTNACC	1 cut(s)	1316
EcoICRI	GAGCTC	1 cut(s)	1947
EcoO65I	GGTNACC	1 cut(s)	1316
EcoRII	CCWGG	4 cut(s)	32, 191, 854, 1953
EcoRV	GATATC	2 cut(s)	241, 338
EcoT14I	CCWWGG	6 cut(s)	234, 715, 845, 1312, 1986, 2031
EcoT38I	GRGCYC	2 cut(s)	1089, 1949
ErhI	CCWWGG	6 cut(s)	234, 715, 845, 1312, 1986, 2031
FaqI	GGGAC	1 cut(s)	1831
FauI	CCCGC	2 cut(s)	33, 226
FbaI	TGATCA	1 cut(s)	1059
FblI	GTMKAC	2 cut(s)	213, 279
FokI	GGATG	8 cut(s)	303, 512, 677, 697, 964, 1282, 1786, 1838
FriOI	GRGCYC	2 cut(s)	1089, 1949
FspBI	CTAG	5 cut(s)	632, 846, 1212, 1553, 2085
GlaI	GCGC	4 cut(s)	125, 147, 149, 263
GsuI	CTGGAG	1 cut(s)	1530
HaeIII	GGCC	6 cut(s)	19, 138, 461, 482, 597, 720
HapII	CCGG	7 cut(s)	208, 268, 444, 594, 1233, 1745, 1771
HgaI	GACGC	2 cut(s)	139, 2000
HhaI	GCGC	4 cut(s)	126, 148, 150, 264
Hin1I	GRCGYC	1 cut(s)	255
Hin6I	GCGC	4 cut(s)	124, 146, 148, 262
HinP1I	GCGC	4 cut(s)	124, 146, 148, 262
HincII	GTYRAC	1 cut(s)	214
HindII	GTYRAC	1 cut(s)	214
HindIII	AAGCTT	1 cut(s)	1415
HpaII	CCGG	7 cut(s)	208, 268, 444, 594, 1233, 1745, 1771
HphI	GGTGA	4 cut(s)	61, 703, 1328, 1481
Hpy166II	GTNNAC	6 cut(s)	10, 214, 280, 968, 1023, 2090
Hpy188I	TCNGA	5 cut(s)	1276, 1300, 1516, 1569, 1906
Hpy8I	GTNNAC	6 cut(s)	10, 214, 280, 968, 1023, 2090
Hpy99I	CGWCG	2 cut(s)	227, 248
HpyAV	CCTTC	7 cut(s)	30, 82, 118, 239, 397, 643, 1816
HpyCH4III	ACNGT	2 cut(s)	1723, 1976
HpyCH4IV	ACGT	4 cut(s)	120, 255, 1105, 2092
HpyF3I	CTNAG	5 cut(s)	363, 957, 1275, 1413, 1934
HpySE526I	ACGT	4 cut(s)	120, 255, 1105, 2092
Hsp92I	GRCGYC	1 cut(s)	255
HspAI	GCGC	4 cut(s)	124, 146, 148, 262
Kpn2I	TCCGGA	1 cut(s)	1770
Ksp22I	TGATCA	1 cut(s)	1059
Kzo9I	GATC	8 cut(s)	52, 198, 272, 925, 1059, 1271, 1585, 1911
LmnI	GCTCC	4 cut(s)	162, 269, 584, 762
Lsp1109I	GCAGC	7 cut(s)	412, 687, 1053, 1418, 1481, 1519, 1885
LweI	GCATC	3 cut(s)	325, 1205, 1393
MaeI	CTAG	5 cut(s)	632, 846, 1212, 1553, 2085
MaeII	ACGT	4 cut(s)	120, 255, 1105, 2092
MaeIII	GTNAC	7 cut(s)	113, 151, 256, 599, 709, 1316, 2008
MalI	GATC	8 cut(s)	54, 200, 274, 927, 1061, 1273, 1587, 1913
MauBI	CGCGCGCG	1 cut(s)	146
MbiI	CCGCTC	1 cut(s)	723
MboI	GATC	8 cut(s)	52, 198, 272, 925, 1059, 1271, 1585, 1911
MboII	GAAGA	8 cut(s)	58, 156, 166, 485, 503, 506, 542, 1281
MfeI	CAATTG	3 cut(s)	491, 1090, 1461
MflI	RGATCY	3 cut(s)	925, 1271, 1911
MhlI	GDGCHC	3 cut(s)	1089, 1111, 1949
MlyI	GAGTC	5 cut(s)	89, 306, 376, 776, 853
MmeI	TCCRAC	2 cut(s)	287, 1063
MroI	TCCGGA	1 cut(s)	1770
MseI	TTAA	4 cut(s)	1164, 1590, 1635, 1761
MslI	CAYNNNNRTG	1 cut(s)	534
MspI	CCGG	7 cut(s)	208, 268, 444, 594, 1233, 1745, 1771
MspR9I	CCNGG	8 cut(s)	34, 193, 209, 268, 445, 856, 1745, 1955
MunI	CAATTG	3 cut(s)	491, 1090, 1461
Mva1269I	GAATGC	2 cut(s)	1576, 1893
MvaI	CCWGG	4 cut(s)	34, 193, 856, 1955
MvnI	CGCG	5 cut(s)	126, 146, 148, 150, 262
NciI	CCSGG	4 cut(s)	209, 268, 445, 1745
NcoI	CCATGG	1 cut(s)	715
NdeII	GATC	8 cut(s)	52, 198, 272, 925, 1059, 1271, 1585, 1911
NlaIV	GGNNCC	1 cut(s)	580
NmeAIII	GCCGAG	2 cut(s)	114, 320
NmuCI	GTSAC	7 cut(s)	113, 151, 256, 599, 709, 1316, 2008
NspI	RCATGY	4 cut(s)	707, 1046, 1815, 1863
PaeI	GCATGC	1 cut(s)	707
PauI	GCGCGC	1 cut(s)	146
PceI	AGGCCT	1 cut(s)	19
PciI	ACATGT	3 cut(s)	1042, 1811, 1859
PcsI	WCGNNNNNNNCGW	2 cut(s)	219, 252
PctI	GAATGC	2 cut(s)	1576, 1893
PfeI	GAWTC	5 cut(s)	1226, 1337, 1682, 1767, 1979
PinAI	ACCGGT	1 cut(s)	1232
PleI	GAGTC	5 cut(s)	89, 305, 376, 776, 853
PpsI	GAGTC	5 cut(s)	89, 305, 376, 776, 853
PscI	ACATGT	3 cut(s)	1042, 1811, 1859
Psp124BI	GAGCTC	1 cut(s)	1949
Psp6I	CCWGG	4 cut(s)	32, 191, 854, 1953
PspEI	GGTNACC	1 cut(s)	1316
PspGI	CCWGG	4 cut(s)	32, 191, 854, 1953
PspN4I	GGNNCC	1 cut(s)	580
PspPI	GGNCC	2 cut(s)	480, 968
PsuI	RGATCY	3 cut(s)	925, 1271, 1911
PteI	GCGCGC	1 cut(s)	146
RsaI	GTAC	2 cut(s)	692, 2091
RsaNI	GTAC	2 cut(s)	691, 2090
RseI	CAYNNNNRTG	1 cut(s)	534
SacI	GAGCTC	1 cut(s)	1949
SalI	GTCGAC	1 cut(s)	212
SaqAI	TTAA	4 cut(s)	1164, 1590, 1635, 1761
Sau3AI	GATC	8 cut(s)	52, 198, 272, 925, 1059, 1271, 1585, 1911
Sau96I	GGNCC	2 cut(s)	480, 968
SchI	GAGTC	5 cut(s)	89, 306, 376, 776, 853
ScrFI	CCNGG	8 cut(s)	34, 193, 209, 268, 445, 856, 1745, 1955
SduI	GDGCHC	3 cut(s)	1089, 1111, 1949
SfaNI	GCATC	3 cut(s)	325, 1205, 1393
SinI	GGWCC	1 cut(s)	968
SmiMI	CAYNNNNRTG	1 cut(s)	534
SmlI	CTYRAG	3 cut(s)	1112, 1250, 1377
SmoI	CTYRAG	3 cut(s)	1112, 1250, 1377
SpeI	ACTAGT	1 cut(s)	1552
SphI	GCATGC	1 cut(s)	707
SseBI	AGGCCT	1 cut(s)	19
SsiI	CCGC	9 cut(s)	37, 40, 126, 139, 219, 404, 449, 721, 1140
SspI	AATATT	1 cut(s)	1009
SspMI	CTAG	5 cut(s)	632, 846, 1212, 1553, 2085
SstI	GAGCTC	1 cut(s)	1949
StuI	AGGCCT	1 cut(s)	19
StyD4I	CCNGG	8 cut(s)	32, 191, 207, 266, 443, 854, 1743, 1953
StyI	CCWWGG	6 cut(s)	234, 715, 845, 1312, 1986, 2031
TaaI	ACNGT	2 cut(s)	1723, 1976
TaiI	ACGT	4 cut(s)	123, 258, 1108, 2095
TaqI	TCGA	4 cut(s)	213, 246, 754, 2053
TatI	WGTACW	1 cut(s)	690
TauI	GCSGC	5 cut(s)	40, 129, 141, 406, 723
TfiI	GAWTC	5 cut(s)	1226, 1337, 1682, 1767, 1979
Tru1I	TTAA	4 cut(s)	1164, 1590, 1635, 1761
Tru9I	TTAA	4 cut(s)	1164, 1590, 1635, 1761
TscAI	CASTG	3 cut(s)	296, 661, 804
TseFI	GTSAC	7 cut(s)	113, 151, 256, 599, 709, 1316, 2008
TseI	GCWGC	7 cut(s)	400, 700, 1066, 1406, 1469, 1507, 1873
Tsp45I	GTSAC	7 cut(s)	113, 151, 256, 599, 709, 1316, 2008
TspDTI	ATGAA	5 cut(s)	334, 506, 762, 966, 1715
TspGWI	ACGGA	3 cut(s)	101, 265, 631
TspRI	CASTG	3 cut(s)	296, 661, 804
VpaK11BI	GGWCC	1 cut(s)	968
XapI	RAATTY	3 cut(s)	749, 1288, 1325
XceI	RCATGY	4 cut(s)	707, 1046, 1815, 1863
XmaJI	CCTAGG	1 cut(s)	845
XmiI	GTMKAC	2 cut(s)	213, 279
XspI	CTAG	5 cut(s)	632, 846, 1212, 1553, 2085
ZraI	GACGTC	1 cut(s)	256

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.