Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0009233

Physical Location & Seq

Genomic Coordinates Reverse (-)

67979666 .. 67982064

Gene Structure 2399 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000015574

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2091 bp

ATGGTTGTGAACGAGAGGGCTGCCAAGAGAGCCAGGAGGAAGGTCGCCGCCGATCTGCCCGACCTCTTCACCTTCCCTCCTCCTCCGGAGTCTCCGGAAGCCTTCCGTGACAACGTGCGCGGCTTCCTCGGCCGCCACGCGCGCGTCACGCTCCCGTCTTCCTCGCTCTTCCCCTCCCTGCTGACCTGGCAGATCCTCCTCCGGGTCGACCCCGCCGTCGTCCTTCCCTTGGATATCGTCGAGGAGGACGTCACGCGCTCCAGGCGATCCGTCTACTGCGACCAGTGCCGAGTCGTTGGTTGGAGTGGGCATCCAGTGTGCCGAAAGCGATATCACTTCATTATAAGAAGCAATGCTGAGAGTTGTGATAGTGAGACCCCGTTCCAGTTCCAGCAGCAGCAGCAGCAGCAGCAGCCACAACAAGAGAAATGGTGCAACTCTATTAGTGCCACCGCGGCGGAGGACACTGCCGATGATGTCGAAGAGTGGGCCTATAACCAATTACATGACAACACTCATCTTCTACATGCTGTCGTTCACTCCAATGGCTTCGCCCACCTGCTTACCCTCAATGGGCGACAAGGAGGTTCCACCACACTCTCCGGCCGTCACATTCTCGACTTGTGGGATAGGCTCTGTCAAGCCCTCTCCGTCAGGAAGGTGAGTGTGATGGATGTATCAAAAAAGTATGGGATGGAGTACCGATTGCTGCATGCAGTCACCCATGGTCGTTCTTGGTATGGGAATTGGGGTTATGAGTTTCGTTCTGGGAGCTATGCTCTCACTCAAGACTCATACCACAAGGCTGTGGAAACCATCTCCACCTTGCCCTTACACCCTTTTCAATTCCAACCTAGGAGACCCAGGACTCGCCTGCAATCTGTTATTGCCTTTTACCAATCTTTCTCCGATGCCCAACTCCGAACAACCAAAGATCTTTTTACATTTATGTTAAGTCTAATTCCTAAATCACATGCGCCTACTGCATCTAAGAAACCCAAGCATGACACTTCCAATGTTTTATGCGTGTGGACGGCCAATGATGTCCAGCATGTGCAACAAGCTATGATCAAGCTGCTCTCAGCAGTTCGGGAGCCCAATTGGGTGTCAAAACGTGCTCTCAAGGGTGCATTATACAAGACTTTCTCCCCAGAGCTTCTTGATTACTCCCTTAAACACTTGGGAGGGCAGTTGGTAGCCAACAACATGGTAATTGAGACTCGATGCAATCCCGATTCTACTGATGTTGAATACAGACTTCAGCCACTAACTGCTGGAAGATCTGAGTTGAAGCCAAATTTTCCATCCGAACAGCAAATCCTTGGTGACCTCAAATTTTTGTATGATTCCATTCTCCACCCTGACACCATGTTAAGCTATGCACCTCAAGCAGTGAGGGAGAATGTTGTTGATGCAGCAACTAAGCTTCTTGATTGCAAGCAATTCATCAAGGACTTCAAGCCTGATAAAATGTTAGCAGCAGACCCGTCTGGTATTTACCTTTGGTGTCATGTACAGCTTTCAGACCACCCAAAAGATGATTTTGTTCTGCCTCCAGAACTAATTGTATTGCCCCTGAATGCAACTCTTGCTGACCTTAAAAGCGAAGCTACCAAAGCCTTTCAGGAAGTATATGCCATGTTTAAAAGGTTTGAAGTTGTGGAGTTGTTTGGATGTGGCTCTATAAATGATTCAATTACAGCAAAACTGCTGGTTGGAACGAGTGGCTCGGTTGATATGAAAGGGAAATGCCCTGCAAAAAGTAACCGTTTCCGGATGGAGAGAGGAATTGAGAGCTGGATTGTTGATTGCACATGTGGGACAAAGGATGATGATGGGGAGAGAATGTTGGCTTGTGATACATGTGGTGTTTGGCAGCACACGAGGTGTGCTGGCATTCATTGCTCCGATGAGATCCCTGCAAAGTTTGTTTGCCTGAGATGTATGAGCTCATATCGGGAGAAAAACCAGAGCACCTGTGATTCTGCCAAGGAAGCTAATTGTGTTCCTTTGACCAACACAACTTGCAGAGCCAAGGCTACTGGTCCGGGCGTAGCATCTAACTTAAATATGACTTCTAGTGTACGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PHD

Protein Analysis

697

Amino Acids

78.37

Weight (kDa)

8.32

Isoelectric Point (pI)

43.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WHD_plant_repro	PF25874	344 - 421	4.2e-10	Winged helix-turn-helix domain in plant reproductive proteins
Ubiquitin_At1g33420	PF25565	497 - 584	1.9e-26	At1g33420-like, ubiquitin-like domain
PHD	PF00628	604 - 648	5e-06	PHD-finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0009233)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G33420 AT1G33420
fragaria_vesca	FvH4_2g00220 FvH4_2g00220
malus_domestica	MD05G1001000.v1.1 MD10G1001100.v1.1 MD10G1001300.v1.1
prunus_persica	Prupe.8G002100_v2.0.a1
pyrus_communis	pycom05g00030 pycom10g00120
rosa_chinensis	RchiOBHm_Chr6g0249511
rosa_laevigata	RLG00000015574
rosa_multiflora	Rmu_co8352193.1_g000001 Rmu_sc0022339.1_g000001 Rmu_ssc0000407.1_g000008
rosa_roxburghii	Rroxscaffold_7G00217610
rosa_rugosa	Rorug05G0493100
rosa_samantha	Rh6AG002800 Rh6BG007300 Rh6CG001800 Rh6DG001800
rosa_wichuraiana	Rw6G000320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	344
AarI	CACCTGC	1 cut(s)	567
AasI	GACNNNNNNGTC	1 cut(s)	215
AatII	GACGTC	1 cut(s)	252
Acc36I	ACCTGC	1 cut(s)	567
AccI	GTMKAC	2 cut(s)	207, 273
AccII	CGCG	6 cut(s)	120, 140, 142, 144, 256, 455
AccIII	TCCGGA	3 cut(s)	85, 94, 1773
AciI	CCGC	7 cut(s)	48, 120, 133, 213, 453, 455, 458
AclWI	GGATC	3 cut(s)	187, 261, 1909
AcoI	YGGCCR	3 cut(s)	130, 604, 1035
AcsI	RAATTY	2 cut(s)	1297, 1334
AcuI	CTGAAG	1 cut(s)	1244
AcyI	GRCGYC	1 cut(s)	249
AdeI	CACNNNGTG	1 cut(s)	1887
AfaI	GTAC	3 cut(s)	701, 1515, 2085
AfiI	CCNNNNNNNGG	3 cut(s)	202, 229, 573
AflIII	ACRYGT	2 cut(s)	1814, 1862
AgsI	TTSAA	6 cut(s)	845, 1250, 1291, 1459, 1655, 1695
AjnI	CCWGG	4 cut(s)	32, 185, 260, 863
AloI	GAACNNNNNNTCC	2 cut(s)	1302, 1334
Alw21I	GWGCWC	3 cut(s)	1120, 1952, 1976
Alw26I	GTCTC	4 cut(s)	96, 368, 853, 1211
AlwI	GGATC	3 cut(s)	187, 261, 1909
Aor13HI	TCCGGA	3 cut(s)	85, 94, 1773
AoxI	GGCC	4 cut(s)	130, 489, 604, 1035
ApoI	RAATTY	2 cut(s)	1297, 1334
AspA2I	CCTAGG	1 cut(s)	854
AspLEI	GCGC	5 cut(s)	120, 142, 144, 258, 979
AspS9I	GGNCC	2 cut(s)	489, 2045
AsuC2I	CCSGG	2 cut(s)	203, 2049
AsuHPI	GGTGA	4 cut(s)	61, 673, 712, 1337
AvaII	GGWCC	1 cut(s)	2045
AvrII	CCTAGG	1 cut(s)	854
BanII	GRGCYC	2 cut(s)	1098, 1952
BauI	CACGAG	1 cut(s)	1882
BbsI	GAAGAC	1 cut(s)	150
Bbv12I	GWGCWC	3 cut(s)	1120, 1952, 1976
BccI	CCATC	6 cut(s)	664, 688, 824, 1312, 1771, 1829
BceAI	ACGGC	3 cut(s)	200, 591, 1050
BcgI	CGANNNNNNTGC	1 cut(s)	36
BciT130I	CCWGG	4 cut(s)	34, 187, 262, 865
BclI	TGATCA	1 cut(s)	1068
BcnI	CCSGG	2 cut(s)	203, 2049
BcoDI	GTCTC	4 cut(s)	96, 368, 853, 1211
BfaI	CTAG	2 cut(s)	855, 2079
BfuAI	ACCTGC	1 cut(s)	567
BglI	GCCNNNNNGGC	1 cut(s)	455
BglII	AGATCT	2 cut(s)	934, 1280
BlnI	CCTAGG	1 cut(s)	854
Bme1390I	CCNGG	6 cut(s)	34, 187, 203, 262, 865, 2049
Bme18I	GGWCC	1 cut(s)	2045
BmgT120I	GGNCC	2 cut(s)	489, 2045
BmiI	GGNNCC	2 cut(s)	589, 1095
BmrFI	CCNGG	6 cut(s)	34, 187, 203, 262, 865, 2049
BmsI	GCATC	6 cut(s)	319, 901, 995, 1214, 1402, 2066
BpiI	GAAGAC	1 cut(s)	150
BplI	GAGNNNNNCTC	2 cut(s)	763, 795
BpmI	CTGGAG	2 cut(s)	244, 1539
BpuEI	CTTGAG	3 cut(s)	771, 1106, 1371
BpuMI	CCSGG	2 cut(s)	203, 2049
BsaHI	GRCGYC	1 cut(s)	249
BsaI	GGTCTC	2 cut(s)	368, 853
BsaJI	CCNNGG	9 cut(s)	127, 228, 453, 724, 854, 863, 1321, 1989, 2034
BsaWI	WCCGGW	3 cut(s)	85, 94, 1773
BsaXI	ACNNNNNCTCC	4 cut(s)	61, 91, 1832, 1862
Bsc4I	CCNNNNNNNGG	3 cut(s)	202, 229, 573
Bse1I	ACTGG	4 cut(s)	283, 314, 385, 2047
Bse3DI	GCAATG	2 cut(s)	358, 1900
BseAI	TCCGGA	3 cut(s)	85, 94, 1773
BseBI	CCWGG	4 cut(s)	34, 187, 262, 865
BseDI	CCNNGG	9 cut(s)	127, 228, 453, 724, 854, 863, 1321, 1989, 2034
BseGI	GGATG	7 cut(s)	310, 679, 699, 1304, 1679, 1782, 1834
BseLI	CCNNNNNNNGG	3 cut(s)	202, 229, 573
BseMI	GCAATG	2 cut(s)	358, 1900
BseMII	CTCAG	4 cut(s)	348, 1095, 1275, 1928
BseNI	ACTGG	4 cut(s)	283, 314, 385, 2047
BsePI	GCGCGC	1 cut(s)	140
BseRI	GAGGAG	4 cut(s)	69, 72, 188, 257
BseX3I	CGGCCG	2 cut(s)	130, 604
Bsh1236I	CGCG	6 cut(s)	120, 140, 142, 144, 256, 455
Bsh1285I	CGRYCG	2 cut(s)	133, 607
BshFI	GGCC	4 cut(s)	132, 491, 606, 1037
BsiEI	CGRYCG	2 cut(s)	133, 607
BsiHKAI	GWGCWC	3 cut(s)	1120, 1952, 1976
BsiSI	CCGG	6 cut(s)	86, 95, 202, 603, 1774, 2048
BslFI	GGGAC	1 cut(s)	1834
BslI	CCNNNNNNNGG	3 cut(s)	202, 229, 573
BsmAI	GTCTC	4 cut(s)	96, 368, 853, 1211
BsmFI	GGGAC	1 cut(s)	1834
BsmI	GAATGC	2 cut(s)	1585, 1896
BsnI	GGCC	4 cut(s)	132, 491, 606, 1037
Bso31I	GGTCTC	2 cut(s)	368, 853
Bsp1286I	GDGCHC	4 cut(s)	1098, 1120, 1952, 1976
Bsp13I	TCCGGA	3 cut(s)	85, 94, 1773
Bsp1407I	TGTACA	1 cut(s)	1513
Bsp143I	GATC	7 cut(s)	52, 192, 266, 934, 1068, 1280, 1914
Bsp19I	CCATGG	1 cut(s)	724
BspACI	CCGC	7 cut(s)	48, 120, 133, 213, 453, 455, 458
BspANI	GGCC	4 cut(s)	132, 491, 606, 1037
BspCNI	CTCAG	4 cut(s)	349, 1094, 1276, 1929
BspEI	TCCGGA	3 cut(s)	85, 94, 1773
BspFNI	CGCG	6 cut(s)	120, 140, 142, 144, 256, 455
BspLI	GGNNCC	2 cut(s)	589, 1095
BspMI	ACCTGC	1 cut(s)	567
BspPI	GGATC	3 cut(s)	187, 261, 1909
BspQI	GCTCTTC	1 cut(s)	173
BspTNI	GGTCTC	2 cut(s)	368, 853
BsrDI	GCAATG	2 cut(s)	358, 1900
BsrGI	TGTACA	1 cut(s)	1513
BsrI	ACTGG	4 cut(s)	283, 314, 385, 2047
BssECI	CCNNGG	9 cut(s)	127, 228, 453, 724, 854, 863, 1321, 1989, 2034
BssHII	GCGCGC	1 cut(s)	140
BssMI	GATC	7 cut(s)	52, 192, 266, 934, 1068, 1280, 1914
BssNI	GRCGYC	1 cut(s)	249
BssSI	CACGAG	1 cut(s)	1882
BssT1I	CCWWGG	6 cut(s)	228, 724, 854, 1321, 1989, 2034
Bst2BI	CACGAG	1 cut(s)	1882
Bst2UI	CCWGG	4 cut(s)	34, 187, 262, 865
Bst4CI	ACNGT	1 cut(s)	1769
Bst6I	CTCTTC	3 cut(s)	71, 173, 477
BstACI	GRCGYC	1 cut(s)	249
BstAPI	GCANNNNNTGC	2 cut(s)	1589, 1902
BstAUI	TGTACA	1 cut(s)	1513
BstC8I	GCNNGC	5 cut(s)	142, 714, 875, 1439, 1894
BstDEI	CTNAG	6 cut(s)	357, 990, 1081, 1284, 1422, 1937
BstDSI	CCRYGG	2 cut(s)	453, 724
BstEII	GGTNACC	1 cut(s)	1325
BstF5I	GGATG	7 cut(s)	310, 679, 699, 1304, 1679, 1782, 1834
BstFNI	CGCG	6 cut(s)	120, 140, 142, 144, 256, 455
BstHHI	GCGC	5 cut(s)	120, 142, 144, 258, 979
BstKTI	GATC	7 cut(s)	55, 195, 269, 937, 1071, 1283, 1917
BstMAI	GTCTC	4 cut(s)	96, 368, 853, 1211
BstMBI	GATC	7 cut(s)	52, 192, 266, 934, 1068, 1280, 1914
BstMCI	CGRYCG	2 cut(s)	133, 607
BstNI	CCWGG	4 cut(s)	34, 187, 262, 865
BstNSI	RCATGY	6 cut(s)	530, 716, 977, 1055, 1818, 1866
BstPI	GGTNACC	1 cut(s)	1325
BstSCI	CCNGG	6 cut(s)	32, 185, 201, 260, 863, 2047
BstUI	CGCG	6 cut(s)	120, 140, 142, 144, 256, 455
BstV2I	GAAGAC	1 cut(s)	150
BstX2I	RGATCY	4 cut(s)	192, 934, 1280, 1914
BstXI	CCANNNNNNTGG	1 cut(s)	1207
BstYI	RGATCY	4 cut(s)	192, 934, 1280, 1914
BstZI	CGGCCG	2 cut(s)	130, 604
BsuRI	GGCC	4 cut(s)	132, 491, 606, 1037
BtgI	CCRYGG	2 cut(s)	453, 724
BtsCI	GGATG	7 cut(s)	310, 679, 699, 1304, 1679, 1782, 1834
BtsI	GCAGTG	2 cut(s)	465, 1398
BtsIMutI	CAGTG	4 cut(s)	290, 321, 465, 1398
BveI	ACCTGC	1 cut(s)	567
Cac8I	GCNNGC	5 cut(s)	142, 714, 875, 1439, 1894
CfoI	GCGC	5 cut(s)	120, 142, 144, 258, 979
Cfr13I	GGNCC	2 cut(s)	489, 2045
Cfr42I	CCGCGG	1 cut(s)	456
CseI	GACGC	1 cut(s)	133
Csp6I	GTAC	3 cut(s)	700, 1514, 2084
CviQI	GTAC	3 cut(s)	700, 1514, 2084
DdeI	CTNAG	6 cut(s)	357, 990, 1081, 1284, 1422, 1937
DpnI	GATC	7 cut(s)	54, 194, 268, 936, 1070, 1282, 1916
DpnII	GATC	7 cut(s)	52, 192, 266, 934, 1068, 1280, 1914
DraI	TTTAAA	1 cut(s)	1645
DraIII	CACNNNGTG	1 cut(s)	1887
DrdI	GACNNNNNNGTC	1 cut(s)	215
DseDI	GACNNNNNNGTC	1 cut(s)	215
EaeI	YGGCCR	3 cut(s)	130, 604, 1035
EagI	CGGCCG	2 cut(s)	130, 604
Eam1104I	CTCTTC	3 cut(s)	71, 173, 477
EarI	CTCTTC	3 cut(s)	71, 173, 477
EciI	GGCGGA	1 cut(s)	473
Ecl136II	GAGCTC	1 cut(s)	1950
EclXI	CGGCCG	2 cut(s)	130, 604
Eco130I	CCWWGG	6 cut(s)	228, 724, 854, 1321, 1989, 2034
Eco24I	GRGCYC	2 cut(s)	1098, 1952
Eco31I	GGTCTC	2 cut(s)	368, 853
Eco32I	GATATC	2 cut(s)	235, 332
Eco47I	GGWCC	1 cut(s)	2045
Eco52I	CGGCCG	2 cut(s)	130, 604
Eco53kI	GAGCTC	1 cut(s)	1950
Eco57I	CTGAAG	1 cut(s)	1244
Eco91I	GGTNACC	1 cut(s)	1325
EcoICRI	GAGCTC	1 cut(s)	1950
EcoO65I	GGTNACC	1 cut(s)	1325
EcoRII	CCWGG	4 cut(s)	32, 185, 260, 863
EcoRV	GATATC	2 cut(s)	235, 332
EcoT14I	CCWWGG	6 cut(s)	228, 724, 854, 1321, 1989, 2034
EcoT38I	GRGCYC	2 cut(s)	1098, 1952
ErhI	CCWWGG	6 cut(s)	228, 724, 854, 1321, 1989, 2034
FaqI	GGGAC	1 cut(s)	1834
FauI	CCCGC	1 cut(s)	220
FbaI	TGATCA	1 cut(s)	1068
FblI	GTMKAC	2 cut(s)	207, 273
FokI	GGATG	7 cut(s)	297, 686, 706, 1291, 1686, 1789, 1841
FriOI	GRGCYC	2 cut(s)	1098, 1952
FspBI	CTAG	2 cut(s)	855, 2079
GlaI	GCGC	5 cut(s)	119, 141, 143, 257, 978
GsuI	CTGGAG	2 cut(s)	244, 1539
HaeIII	GGCC	4 cut(s)	132, 491, 606, 1037
HapII	CCGG	6 cut(s)	86, 95, 202, 603, 1774, 2048
HgaI	GACGC	1 cut(s)	133
HhaI	GCGC	5 cut(s)	120, 142, 144, 258, 979
Hin1I	GRCGYC	1 cut(s)	249
Hin6I	GCGC	5 cut(s)	118, 140, 142, 256, 977
HinP1I	GCGC	5 cut(s)	118, 140, 142, 256, 977
HincII	GTYRAC	1 cut(s)	208
HindII	GTYRAC	1 cut(s)	208
HindIII	AAGCTT	1 cut(s)	1424
HinfI	GANTC	9 cut(s)	89, 291, 791, 868, 1219, 1235, 1346, 1691, 1982
HpaII	CCGG	6 cut(s)	86, 95, 202, 603, 1774, 2048
HphI	GGTGA	4 cut(s)	61, 673, 712, 1337
Hpy166II	GTNNAC	6 cut(s)	10, 208, 274, 538, 1032, 2084
Hpy188I	TCNGA	6 cut(s)	910, 923, 1285, 1309, 1525, 1909
Hpy8I	GTNNAC	6 cut(s)	10, 208, 274, 538, 1032, 2084
Hpy99I	CGWCG	2 cut(s)	221, 242
HpyAV	CCTTC	5 cut(s)	34, 82, 112, 233, 652
HpyCH4III	ACNGT	1 cut(s)	1769
HpyCH4IV	ACGT	4 cut(s)	114, 249, 1114, 2086
HpyF3I	CTNAG	6 cut(s)	357, 990, 1081, 1284, 1422, 1937
HpySE526I	ACGT	4 cut(s)	114, 249, 1114, 2086
Hsp92I	GRCGYC	1 cut(s)	249
HspAI	GCGC	5 cut(s)	118, 140, 142, 256, 977
Kpn2I	TCCGGA	3 cut(s)	85, 94, 1773
Ksp22I	TGATCA	1 cut(s)	1068
KspI	CCGCGG	1 cut(s)	456
Kzo9I	GATC	7 cut(s)	52, 192, 266, 934, 1068, 1280, 1914
LguI	GCTCTTC	1 cut(s)	173
LmnI	GCTCC	5 cut(s)	156, 263, 771, 1093, 1910
LweI	GCATC	6 cut(s)	319, 901, 995, 1214, 1402, 2066
MaeI	CTAG	2 cut(s)	855, 2079
MaeII	ACGT	4 cut(s)	114, 249, 1114, 2086
MaeIII	GTNAC	7 cut(s)	107, 145, 250, 608, 718, 1325, 1763
MalI	GATC	7 cut(s)	54, 194, 268, 936, 1070, 1282, 1916
MauBI	CGCGCGCG	1 cut(s)	140
MboI	GATC	7 cut(s)	52, 192, 266, 934, 1068, 1280, 1914
MboII	GAAGA	6 cut(s)	58, 150, 160, 494, 512, 1290
MfeI	CAATTG	1 cut(s)	1099
MflI	RGATCY	4 cut(s)	192, 934, 1280, 1914
MhlI	GDGCHC	4 cut(s)	1098, 1120, 1952, 1976
MlyI	GAGTC	5 cut(s)	98, 300, 785, 862, 1213
MmeI	TCCRAC	3 cut(s)	281, 874, 1696
MroI	TCCGGA	3 cut(s)	85, 94, 1773
MseI	TTAA	6 cut(s)	953, 1173, 1373, 1599, 1644, 2066
MslI	CAYNNNNRTG	1 cut(s)	543
MspA1I	CMGCKG	1 cut(s)	455
MspI	CCGG	6 cut(s)	86, 95, 202, 603, 1774, 2048
MspR9I	CCNGG	6 cut(s)	34, 187, 203, 262, 865, 2049
MunI	CAATTG	1 cut(s)	1099
Mva1269I	GAATGC	2 cut(s)	1585, 1896
MvaI	CCWGG	4 cut(s)	34, 187, 262, 865
MvnI	CGCG	6 cut(s)	120, 140, 142, 144, 256, 455
NciI	CCSGG	2 cut(s)	203, 2049
NcoI	CCATGG	1 cut(s)	724
NdeII	GATC	7 cut(s)	52, 192, 266, 934, 1068, 1280, 1914
NlaIV	GGNNCC	2 cut(s)	589, 1095
NmeAIII	GCCGAG	2 cut(s)	108, 314
NmuCI	GTSAC	6 cut(s)	107, 145, 250, 608, 718, 1325
NspI	RCATGY	6 cut(s)	530, 716, 977, 1055, 1818, 1866
PaeI	GCATGC	1 cut(s)	716
PaqCI	CACCTGC	1 cut(s)	567
PauI	GCGCGC	1 cut(s)	140
PciI	ACATGT	2 cut(s)	1814, 1862
PciSI	GCTCTTC	1 cut(s)	173
PcsI	WCGNNNNNNNCGW	2 cut(s)	213, 246
PctI	GAATGC	2 cut(s)	1585, 1896
PfeI	GAWTC	4 cut(s)	1235, 1346, 1691, 1982
PleI	GAGTC	5 cut(s)	97, 299, 785, 862, 1213
PpsI	GAGTC	5 cut(s)	97, 299, 785, 862, 1213
PscI	ACATGT	2 cut(s)	1814, 1862
PsiI	TTATAA	1 cut(s)	344
Psp124BI	GAGCTC	1 cut(s)	1952
Psp6I	CCWGG	4 cut(s)	32, 185, 260, 863
PspEI	GGTNACC	1 cut(s)	1325
PspGI	CCWGG	4 cut(s)	32, 185, 260, 863
PspN4I	GGNNCC	2 cut(s)	589, 1095
PspPI	GGNCC	2 cut(s)	489, 2045
PsuI	RGATCY	4 cut(s)	192, 934, 1280, 1914
PteI	GCGCGC	1 cut(s)	140
RsaI	GTAC	3 cut(s)	701, 1515, 2085
RsaNI	GTAC	3 cut(s)	700, 1514, 2084
RseI	CAYNNNNRTG	1 cut(s)	543
SacI	GAGCTC	1 cut(s)	1952
SacII	CCGCGG	1 cut(s)	456
SalI	GTCGAC	1 cut(s)	206
SapI	GCTCTTC	1 cut(s)	173
SaqAI	TTAA	6 cut(s)	953, 1173, 1373, 1599, 1644, 2066
Sau3AI	GATC	7 cut(s)	52, 192, 266, 934, 1068, 1280, 1914
Sau96I	GGNCC	2 cut(s)	489, 2045
SchI	GAGTC	5 cut(s)	98, 300, 785, 862, 1213
ScrFI	CCNGG	6 cut(s)	34, 187, 203, 262, 865, 2049
SduI	GDGCHC	4 cut(s)	1098, 1120, 1952, 1976
SfaNI	GCATC	6 cut(s)	319, 901, 995, 1214, 1402, 2066
Sfr303I	CCGCGG	1 cut(s)	456
SgrBI	CCGCGG	1 cut(s)	456
SinI	GGWCC	1 cut(s)	2045
SmiMI	CAYNNNNRTG	1 cut(s)	543
SmlI	CTYRAG	3 cut(s)	786, 1121, 1386
SmoI	CTYRAG	3 cut(s)	786, 1121, 1386
SphI	GCATGC	1 cut(s)	716
SsiI	CCGC	7 cut(s)	48, 120, 133, 213, 453, 455, 458
SspMI	CTAG	2 cut(s)	855, 2079
SstI	GAGCTC	1 cut(s)	1952
StyD4I	CCNGG	6 cut(s)	32, 185, 201, 260, 863, 2047
StyI	CCWWGG	6 cut(s)	228, 724, 854, 1321, 1989, 2034
TaaI	ACNGT	1 cut(s)	1769
TaiI	ACGT	4 cut(s)	117, 252, 1117, 2089
TaqI	TCGA	5 cut(s)	207, 240, 480, 618, 1222
TatI	WGTACW	1 cut(s)	1513
TauI	GCSGC	4 cut(s)	50, 123, 135, 458
TfiI	GAWTC	4 cut(s)	1235, 1346, 1691, 1982
Tru1I	TTAA	6 cut(s)	953, 1173, 1373, 1599, 1644, 2066
Tru9I	TTAA	6 cut(s)	953, 1173, 1373, 1599, 1644, 2066
TscAI	CASTG	4 cut(s)	290, 321, 472, 1398
TseFI	GTSAC	6 cut(s)	107, 145, 250, 608, 718, 1325
Tsp45I	GTSAC	6 cut(s)	107, 145, 250, 608, 718, 1325
TspDTI	ATGAA	4 cut(s)	328, 1435, 1754, 1889
TspGWI	ACGGA	3 cut(s)	95, 259, 640
TspRI	CASTG	4 cut(s)	290, 321, 472, 1398
VpaK11BI	GGWCC	1 cut(s)	2045
XapI	RAATTY	2 cut(s)	1297, 1334
XceI	RCATGY	6 cut(s)	530, 716, 977, 1055, 1818, 1866
XmaJI	CCTAGG	1 cut(s)	854
XmiI	GTMKAC	2 cut(s)	207, 273
XspI	CTAG	2 cut(s)	855, 2079
ZraI	GACGTC	1 cut(s)	250

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.