AT1G48870

WD domain, G-beta repeat

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0005653
Physical Location & Seq
Reverse (-)
18072123 .. 18076405
4283 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G48870.2

Sequence Viewer

Length: 1782 bp
ATGATGAGTGTGGGAAGAAGTGAAGTTGTTGTTGATGATTTGTTCTTTGATTCATCTGATGTTTTGTCTATTGGTGAACAAGTAGTAGTAGAAGAAGAAGAAGTAGAAGAAGCAGAGTTTCAAGTTTGGTCTGGTGAGCCAATTAGTGTTGAGGAACGTCGTGTACGGTTTCTCAAGAAAATGGGTTTATTAGAAGAGAGGTGTCTGGAGAGGATGGTAAGCGATTACAGTGATGAGGTTACTAGTTCTTCTTCAGATTCATCTCTCTGTGATAGTGGATTGCAGTGTTGTGTTAGAGAGGAGAACTATGGATCAACTACTTCAATCTCTGATGAGGAACTAGAAGGAGTGGATGATGATGATGATGATTCAGAAGAAATCTCAAGTAATGCTTCCACCAGTCCATCGCGGAGTTCCAGCAAGAAAAGCGCGAAAAAATGGTTGTTCAATTGCTTTTCAGCAGGAGTGAAGGATAAAGATTTCAAATACAAATCAAGTGAAGAGACAATGAGCAAAGTGAAAGTGAAGACTAACAAGAAGAGTCATGTAGAGTTATCTGCAGCTTACATGGTACAAAAGATTAATGGACACAAAGGGAAAATTTGGACATTAAAGTTTAGTCCTGATGGTAAATACTTAGCAACCGGAGGCGAAGATGGAGTTGTAAAGATATGGCGAATCACGCTATCGGATTCTCTACTCGCCTCTTTTCTTCGACAACAAGAACCAATAAACCAACAAGCAGCATTGGTTCTGTTTCCTCAGAAAGCTTTTCATATCGAAGAAACACCGTTTCAAGAACTTTATGGTCATACCGGAGATGTCTTGGACTTAGCATGGTCAGACTCAAATTTGCTTCTTTCAGCTTCTAAAGACAAGACAGTTCGGTTATGGAGAACTGGTTGTGATCAATGTCTTCATGTCTTCCATCATAACAACTACGTGACTTGCGTTGAATTCAATCCTGTAAATAAGAACAACTTCGCAAGTGGGTCTATAGATGGAAAAGCTCGAATCTGGGGTTTGTCAGAAGAAAGAGTTGTCGCTTGGACCGATGTTCGTGATTCCATTTCTGCAATCTCTTACCAACCAAACGGAAATGGGTTTGTTGTTGGTTGCATCACTGGGAACTGTAGGTTCTATCAAATCTTAGATAACGATGTGATAATGGATGAACAGATTCTTATCCGGGGAAGGAATAGAATCACCGCCGTGGAGTTTTGTCCTGGAAGCTCCGAGAAAATTTTAGTATCTTCTGAAGATTCGAAAGTTCGAATATTTGACAAAACACAAATGATTCACAAATTCAAAGCTCCATCGAATTTTGGGAGACAATCGTCGGCGTCGTTTGTTTCTTCCACCGGAAAACATATTTTATCAGTTAGACGAGGTGTCGGAGTTTATCTCTGGAACAACGATGCGTTTCCTTCGAGGAAAGGCGCAAAATCGTCGCGTTCTTTCGAGTATTTTCATTCGCCGGGGGTTTCCGCGGTGGCGGCTTGGACTCAACCGGAAACAAAAGTGTCGAAAGTAGCCGGTGATGATGAAGAATCACGGCGCGTTATGAGAAAAATACAGAGCTCTGGGAGATTGTCTCGCTCCTGTCGTGTTACCGCCACGTGGCCGGAGGAGAAGCTCCTTATGAATGTAGGAAGTTACGATAGTAACCTTCCCGTCGGCGAGTTTGATCTTGCCGAGGCGTGGAGACTGGTGATCGTGACCGTGAGCTTGGATGGGATGATTAGGACATTCCATAACTATGGACTGCCACGTACATTTTAG

Protein Analysis

593

Amino Acids

66.41

Weight (kDa)

5.52

Isoelectric Point (pI)

50.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_WDR3_2nd PF25172 173 - 231 1e-07 WDR3 second beta-propeller domain
Beta-prop_CAF1B_HIR1 PF24105 181 - 349 1.9e-16 CAF1B/HIR1 beta-propeller domain
NBCH_WD40 PF20426 183 - 295 1.1e-06 Neurobeachin beta propeller domain
Beta-prop_THOC3 PF25174 185 - 228 6.7e-09 THOC3 beta-propeller domain
WD40_Prp19 PF24814 186 - 226 4.2e-06 Prp19 WD40 domain
WD40_CDC20-Fz PF24807 186 - 230 9e-08 CDC20/Fizzy WD40 domain
WD40_WDHD1_1st PF24817 188 - 231 2.5e-06 WDHD1 first WD40 domain
Beta-prop_WDR3_1st PF25173 190 - 227 1.8e-06 WDR3 first beta-propeller domain
WD40 PF00400 191 - 225 7.6e-11 WD domain, G-beta repeat
Beta-prop_WDR5 PF25175 194 - 229 2.3e-06 WDR5 beta-propeller domain
Beta-prop_WDR3_1st PF25173 261 - 341 2e-10 WDR3 first beta-propeller domain
Beta-prop_WDR5 PF25175 263 - 472 1.1e-31 WDR5 beta-propeller domain
WD40_Prp19 PF24814 263 - 389 4.4e-15 Prp19 WD40 domain
Beta-prop_WDR3_2nd PF25172 264 - 382 2.4e-09 WDR3 second beta-propeller domain
WD40 PF00400 264 - 298 1.4e-07 WD domain, G-beta repeat
WD40_CDC20-Fz PF24807 265 - 427 9.5e-12 CDC20/Fizzy WD40 domain
Beta-prop_THOC3 PF25174 266 - 467 4e-20 THOC3 beta-propeller domain
WD40_Gbeta PF25391 266 - 429 1.2e-10 G protein beta WD-40 repeat protein
WDR55 PF24796 272 - 431 9.5e-08 WDR55
Beta-prop_WDR75_1st PF23869 281 - 367 1.1e-07 WD repeat-containing protein 75 first beta-propeller
EIF3I PF24805 282 - 431 3.3e-06 EIF3I
Beta-prop_WDR90_POC16_2nd PF23393 286 - 387 6.7e-08 WDR90/POC16, second beta-propeller
WD40 PF00400 304 - 340 7e-06 WD domain, G-beta repeat
Beta-prop_WDR36-Utp21_2nd PF25168 311 - 474 2.2e-06 WDR36/Utp21 second beta-propeller domain
WD40_WDHD1_1st PF24817 313 - 473 2.6e-07 WDHD1 first WD40 domain
Beta-prop_EML_2 PF23414 325 - 474 1.2e-11 Echinoderm microtubule-associated protein second beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 5 cut(s) 409, 431, 1453, 1490, 1560
AciI CCGC 6 cut(s) 409, 1209, 1488, 1490, 1496, 1614
AclWI GGATC 1 cut(s) 319
AcoI YGGCCR 1 cut(s) 1622
AcsI RAATTY 6 cut(s) 600, 850, 956, 1242, 1304, 1321
AcuI CTGAAG 2 cut(s) 237, 1278
AcvI CACGTG 1 cut(s) 1620
AcyI GRCGYC 1 cut(s) 1343
AfaI GTAC 3 cut(s) 165, 573, 1774
AfiI CCNNNNNNNGG 2 cut(s) 1620, 1701
AgsI TTSAA 8 cut(s) 122, 324, 448, 484, 797, 956, 961, 1309
AhdI GACNNNNNGTC 1 cut(s) 1391
AhlI ACTAGT 1 cut(s) 242
AjnI CCWGG 1 cut(s) 1225
AleI CACNNNNGTG 1 cut(s) 1211
AluBI AGCT 9 cut(s) 563, 770, 866, 1010, 1233, 1313, 1581, 1636, 1728
AluI AGCT 9 cut(s) 563, 770, 866, 1010, 1233, 1313, 1581, 1636, 1728
Alw21I GWGCWC 1 cut(s) 1583
Alw26I GTCTC 4 cut(s) 497, 1324, 1599, 1699
AlwI GGATC 1 cut(s) 319
AoxI GGCC 1 cut(s) 1622
ApeKI GCWGC 2 cut(s) 560, 743
ApoI RAATTY 6 cut(s) 600, 850, 956, 1242, 1304, 1321
AseI ATTAAT 1 cut(s) 582
Asp700I GAANNNNTTC 2 cut(s) 980, 1179
AspLEI GCGC 3 cut(s) 431, 1442, 1560
AspS9I GGNCC 1 cut(s) 1050
AsuC2I CCSGG 2 cut(s) 1190, 1479
AsuHPI GGTGA 5 cut(s) 86, 146, 1198, 1550, 1723
AsuII TTCGAA 2 cut(s) 1265, 1273
AvaII GGWCC 1 cut(s) 1050
BanII GRGCYC 1 cut(s) 1583
BbrPI CACGTG 1 cut(s) 1620
BbsI GAAGAC 3 cut(s) 533, 908, 916
Bbv12I GWGCWC 1 cut(s) 1583
BbvI GCAGC 2 cut(s) 572, 755
BccI CCATC 8 cut(s) 208, 412, 620, 650, 936, 995, 1324, 1727
BceAI ACGGC 2 cut(s) 1196, 1571
BcgI CGANNNNNNTGC 2 cut(s) 1431, 1465
BciT130I CCWGG 1 cut(s) 1227
BclI TGATCA 1 cut(s) 907
BcnI CCSGG 2 cut(s) 1190, 1479
BcoDI GTCTC 4 cut(s) 497, 1324, 1599, 1699
BcuI ACTAGT 1 cut(s) 242
BfaI CTAG 2 cut(s) 243, 341
BfmI CTRYAG 3 cut(s) 558, 996, 1132
BisI GCNGC 3 cut(s) 561, 744, 1497
BlsI GCNGC 3 cut(s) 562, 745, 1498
Bme1390I CCNGG 3 cut(s) 1190, 1227, 1479
Bme18I GGWCC 1 cut(s) 1050
BmeRI GACNNNNNGTC 1 cut(s) 1391
BmgT120I GGNCC 1 cut(s) 1050
BmrFI CCNGG 3 cut(s) 1190, 1227, 1479
BmrI ACTGGG 1 cut(s) 1134
BmsI GCATC 2 cut(s) 1128, 1408
BmuI ACTGGG 1 cut(s) 1134
BoxI GACNNNNGTC 1 cut(s) 1336
BpiI GAAGAC 3 cut(s) 533, 908, 916
BplI GAGNNNNNCTC 4 cut(s) 1389, 1421, 1579, 1611
BpmI CTGGAG 1 cut(s) 227
Bpu14I TTCGAA 2 cut(s) 1265, 1273
BpuEI CTTGAG 2 cut(s) 158, 367
BpuMI CCSGG 2 cut(s) 1190, 1479
BsaAI YACGTR 3 cut(s) 943, 1620, 1772
BsaBI GATNNNNATC 1 cut(s) 1184
BsaHI GRCGYC 1 cut(s) 1343
BsaJI CCNNGG 5 cut(s) 1189, 1212, 1478, 1488, 1695
BsaWI WCCGGW 4 cut(s) 644, 815, 1361, 1510
BsaXI ACNNNNNCTCC 2 cut(s) 886, 916
Bsc4I CCNNNNNNNGG 2 cut(s) 1620, 1701
Bse118I RCCGGY 1 cut(s) 1535
Bse1I ACTGG 4 cut(s) 399, 904, 1129, 1713
Bse8I GATNNNNATC 1 cut(s) 1184
BseBI CCWGG 1 cut(s) 1227
BseDI CCNNGG 5 cut(s) 1189, 1212, 1478, 1488, 1695
BseGI GGATG 5 cut(s) 219, 358, 1177, 1738, 1743
BseJI GATNNNNATC 1 cut(s) 1184
BseLI CCNNNNNNNGG 2 cut(s) 1620, 1701
BseMII CTCAG 1 cut(s) 776
BseNI ACTGG 4 cut(s) 399, 904, 1129, 1713
BseRI GAGGAG 2 cut(s) 314, 1643
BseXI GCAGC 2 cut(s) 572, 755
Bsh1236I CGCG 5 cut(s) 409, 431, 1453, 1490, 1560
BshFI GGCC 1 cut(s) 1624
BsiHKAI GWGCWC 1 cut(s) 1583
BsiSI CCGG 8 cut(s) 645, 816, 1189, 1362, 1478, 1511, 1536, 1625
BslI CCNNNNNNNGG 2 cut(s) 1620, 1701
BsmAI GTCTC 4 cut(s) 497, 1324, 1599, 1699
BsnI GGCC 1 cut(s) 1624
Bsp119I TTCGAA 2 cut(s) 1265, 1273
Bsp1286I GDGCHC 1 cut(s) 1583
Bsp143I GATC 4 cut(s) 311, 907, 1687, 1713
BspACI CCGC 6 cut(s) 409, 1209, 1488, 1490, 1496, 1614
BspANI GGCC 1 cut(s) 1624
BspCNI CTCAG 1 cut(s) 775
BspFNI CGCG 5 cut(s) 409, 431, 1453, 1490, 1560
BspMAI CTGCAG 1 cut(s) 562
BspPI GGATC 1 cut(s) 319
BspT104I TTCGAA 2 cut(s) 1265, 1273
BsrFI RCCGGY 1 cut(s) 1535
BsrI ACTGG 4 cut(s) 399, 904, 1129, 1713
BssAI RCCGGY 1 cut(s) 1535
BssECI CCNNGG 5 cut(s) 1189, 1212, 1478, 1488, 1695
BssMI GATC 4 cut(s) 311, 907, 1687, 1713
BssNI GRCGYC 1 cut(s) 1343
Bst2UI CCWGG 1 cut(s) 1227
Bst4CI ACNGT 6 cut(s) 168, 230, 792, 883, 1133, 1723
Bst6I CTCTTC 3 cut(s) 189, 495, 533
BstACI GRCGYC 1 cut(s) 1343
BstBAI YACGTR 3 cut(s) 943, 1620, 1772
BstBI TTCGAA 2 cut(s) 1265, 1273
BstDEI CTNAG 4 cut(s) 637, 762, 832, 1150
BstDSI CCRYGG 2 cut(s) 1212, 1488
BstF5I GGATG 5 cut(s) 219, 358, 1177, 1738, 1743
BstFNI CGCG 5 cut(s) 409, 431, 1453, 1490, 1560
BstHHI GCGC 3 cut(s) 431, 1442, 1560
BstKTI GATC 4 cut(s) 314, 910, 1690, 1716
BstMAI GTCTC 4 cut(s) 497, 1324, 1599, 1699
BstMBI GATC 4 cut(s) 311, 907, 1687, 1713
BstMWI GCNNNNNNNGC 3 cut(s) 426, 682, 1496
BstNI CCWGG 1 cut(s) 1227
BstPAI GACNNNNGTC 1 cut(s) 1336
BstSCI CCNGG 3 cut(s) 1188, 1225, 1477
BstSFI CTRYAG 3 cut(s) 558, 996, 1132
BstUI CGCG 5 cut(s) 409, 431, 1453, 1490, 1560
BstV1I GCAGC 2 cut(s) 572, 755
BstV2I GAAGAC 3 cut(s) 533, 908, 916
BstXI CCANNNNNNTGG 1 cut(s) 1760
BsuRI GGCC 1 cut(s) 1624
BtgI CCRYGG 2 cut(s) 1212, 1488
BtgZI GCGATG 1 cut(s) 390
BtsCI GGATG 5 cut(s) 219, 358, 1177, 1738, 1743
BtsI GCAGTG 1 cut(s) 290
BtsIMutI CAGTG 3 cut(s) 235, 290, 1122
CfoI GCGC 3 cut(s) 431, 1442, 1560
Cfr10I RCCGGY 1 cut(s) 1535
Cfr13I GGNCC 1 cut(s) 1050
Cfr42I CCGCGG 1 cut(s) 1491
CseI GACGC 1 cut(s) 1332
Csp6I GTAC 3 cut(s) 164, 572, 1773
CviAII CATG 4 cut(s) 545, 568, 837, 920
CviQI GTAC 3 cut(s) 164, 572, 1773
DdeI CTNAG 4 cut(s) 637, 762, 832, 1150
DpnI GATC 4 cut(s) 313, 909, 1689, 1715
DpnII GATC 4 cut(s) 311, 907, 1687, 1713
DriI GACNNNNNGTC 1 cut(s) 1391
EaeI YGGCCR 1 cut(s) 1622
Eam1104I CTCTTC 3 cut(s) 189, 495, 533
Eam1105I GACNNNNNGTC 1 cut(s) 1391
EarI CTCTTC 3 cut(s) 189, 495, 533
Ecl136II GAGCTC 1 cut(s) 1581
Eco24I GRGCYC 1 cut(s) 1583
Eco47I GGWCC 1 cut(s) 1050
Eco53kI GAGCTC 1 cut(s) 1581
Eco57I CTGAAG 2 cut(s) 237, 1278
Eco72I CACGTG 1 cut(s) 1620
EcoICRI GAGCTC 1 cut(s) 1581
EcoRI GAATTC 1 cut(s) 956
EcoRII CCWGG 1 cut(s) 1225
EcoT38I GRGCYC 1 cut(s) 1583
FaeI CATG 4 cut(s) 548, 571, 840, 923
FalI AAGNNNNNCTT 4 cut(s) 376, 408, 965, 997
FatI CATG 4 cut(s) 544, 567, 836, 919
FbaI TGATCA 1 cut(s) 907
Fnu4HI GCNGC 3 cut(s) 561, 744, 1497
FokI GGATG 5 cut(s) 226, 365, 1184, 1745, 1750
FriOI GRGCYC 1 cut(s) 1583
Fsp4HI GCNGC 3 cut(s) 561, 744, 1497
FspBI CTAG 2 cut(s) 243, 341
GlaI GCGC 3 cut(s) 430, 1441, 1559
GluI GCNGC 3 cut(s) 561, 744, 1497
GsuI CTGGAG 1 cut(s) 227
HaeIII GGCC 1 cut(s) 1624
HapII CCGG 8 cut(s) 645, 816, 1189, 1362, 1478, 1511, 1536, 1625
HgaI GACGC 1 cut(s) 1332
HhaI GCGC 3 cut(s) 431, 1442, 1560
Hin1I GRCGYC 1 cut(s) 1343
Hin1II CATG 4 cut(s) 548, 571, 840, 923
Hin6I GCGC 3 cut(s) 429, 1440, 1558
HinP1I GCGC 3 cut(s) 429, 1440, 1558
HindIII AAGCTT 1 cut(s) 768
HpaII CCGG 8 cut(s) 645, 816, 1189, 1362, 1478, 1511, 1536, 1625
HphI GGTGA 5 cut(s) 86, 146, 1198, 1550, 1723
Hpy166II GTNNAC 2 cut(s) 77, 164
Hpy188III TCNNGA 7 cut(s) 175, 206, 623, 797, 1061, 1408, 1717
Hpy8I GTNNAC 2 cut(s) 77, 164
Hpy99I CGWCG 5 cut(s) 162, 1342, 1348, 1453, 1679
HpyAV CCTTC 5 cut(s) 338, 463, 1188, 1437, 1679
HpyCH4III ACNGT 6 cut(s) 168, 230, 792, 883, 1133, 1723
HpyCH4IV ACGT 4 cut(s) 157, 942, 1619, 1771
HpyCH4V TGCA 4 cut(s) 283, 560, 1076, 1119
HpyF10VI GCNNNNNNNGC 3 cut(s) 426, 682, 1496
HpyF3I CTNAG 4 cut(s) 637, 762, 832, 1150
HpySE526I ACGT 4 cut(s) 157, 942, 1619, 1771
Hsp92I GRCGYC 1 cut(s) 1343
Hsp92II CATG 4 cut(s) 548, 571, 840, 923
HspAI GCGC 3 cut(s) 429, 1440, 1558
Ksp22I TGATCA 1 cut(s) 907
KspI CCGCGG 1 cut(s) 1491
Kzo9I GATC 4 cut(s) 311, 907, 1687, 1713
LmnI GCTCC 4 cut(s) 1238, 1318, 1604, 1641
Lsp1109I GCAGC 2 cut(s) 572, 755
LweI GCATC 2 cut(s) 1128, 1408
MaeI CTAG 2 cut(s) 243, 341
MaeII ACGT 4 cut(s) 157, 942, 1619, 1771
MaeIII GTNAC 6 cut(s) 238, 943, 1609, 1655, 1664, 1717
MalI GATC 4 cut(s) 313, 909, 1689, 1715
MboI GATC 4 cut(s) 311, 907, 1687, 1713
MfeI CAATTG 1 cut(s) 448
MhlI GDGCHC 1 cut(s) 1583
MluCI AATT 8 cut(s) 141, 448, 600, 850, 956, 1242, 1304, 1321
MlyI GAGTC 3 cut(s) 550, 839, 1498
MmeI TCCRAC 1 cut(s) 1375
MroXI GAANNNNTTC 2 cut(s) 980, 1179
MseI TTAA 2 cut(s) 582, 611
MslI CAYNNNNRTG 2 cut(s) 1211, 1758
MspA1I CMGCKG 1 cut(s) 1490
MspI CCGG 8 cut(s) 645, 816, 1189, 1362, 1478, 1511, 1536, 1625
MspR9I CCNGG 3 cut(s) 1190, 1227, 1479
MunI CAATTG 1 cut(s) 448
MvaI CCWGG 1 cut(s) 1227
MvnI CGCG 5 cut(s) 409, 431, 1453, 1490, 1560
MwoI GCNNNNNNNGC 3 cut(s) 426, 682, 1496
NciI CCSGG 2 cut(s) 1190, 1479
NdeII GATC 4 cut(s) 311, 907, 1687, 1713
NlaIII CATG 4 cut(s) 548, 571, 840, 923
NmeAIII GCCGAG 1 cut(s) 1720
NmuCI GTSAC 2 cut(s) 943, 1717
NspV TTCGAA 2 cut(s) 1265, 1273
OliI CACNNNNGTG 1 cut(s) 1211
PcsI WCGNNNNNNNCGW 4 cut(s) 948, 1050, 1343, 1603
PdmI GAANNNNTTC 2 cut(s) 980, 1179
PfoI TCCNGGA 1 cut(s) 1225
PkrI GCNGC 3 cut(s) 562, 745, 1498
PleI GAGTC 3 cut(s) 549, 839, 1498
PmaCI CACGTG 1 cut(s) 1620
PmlI CACGTG 1 cut(s) 1620
PpsI GAGTC 3 cut(s) 549, 839, 1498
Ppu21I YACGTR 3 cut(s) 943, 1620, 1772
PshAI GACNNNNGTC 1 cut(s) 1336
PshBI ATTAAT 1 cut(s) 582
Psp124BI GAGCTC 1 cut(s) 1583
Psp6I CCWGG 1 cut(s) 1225
PspCI CACGTG 1 cut(s) 1620
PspGI CCWGG 1 cut(s) 1225
PspPI GGNCC 1 cut(s) 1050
PsrI GAACNNNNNNTAC 2 cut(s) 147, 179
PstI CTGCAG 1 cut(s) 562
RsaI GTAC 3 cut(s) 165, 573, 1774
RsaNI GTAC 3 cut(s) 164, 572, 1773
RseI CAYNNNNRTG 2 cut(s) 1211, 1758
SacI GAGCTC 1 cut(s) 1583
SacII CCGCGG 1 cut(s) 1491
SaqAI TTAA 2 cut(s) 582, 611
SatI GCNGC 3 cut(s) 561, 744, 1497
Sau3AI GATC 4 cut(s) 311, 907, 1687, 1713
Sau96I GGNCC 1 cut(s) 1050
SchI GAGTC 3 cut(s) 550, 839, 1498
ScrFI CCNGG 3 cut(s) 1190, 1227, 1479
SduI GDGCHC 1 cut(s) 1583
SfaNI GCATC 2 cut(s) 1128, 1408
SfcI CTRYAG 3 cut(s) 558, 996, 1132
Sfr303I CCGCGG 1 cut(s) 1491
SfuI TTCGAA 2 cut(s) 1265, 1273
SgrBI CCGCGG 1 cut(s) 1491
SinI GGWCC 1 cut(s) 1050
SmiMI CAYNNNNRTG 2 cut(s) 1211, 1758
SmlI CTYRAG 2 cut(s) 173, 382
SmoI CTYRAG 2 cut(s) 173, 382
SpeI ACTAGT 1 cut(s) 242
Sse9I AATT 8 cut(s) 141, 448, 600, 850, 956, 1242, 1304, 1321
SsiI CCGC 6 cut(s) 409, 1209, 1488, 1490, 1496, 1614
SspI AATATT 1 cut(s) 1278
SspMI CTAG 2 cut(s) 243, 341
SstI GAGCTC 1 cut(s) 1583
StyD4I CCNGG 3 cut(s) 1188, 1225, 1477
TaaI ACNGT 6 cut(s) 168, 230, 792, 883, 1133, 1723
TaiI ACGT 4 cut(s) 160, 945, 1622, 1774
TaqI TCGA 9 cut(s) 715, 780, 1012, 1265, 1273, 1319, 1430, 1461, 1526
TaqII GACCGA 1 cut(s) 1067
TasI AATT 8 cut(s) 141, 448, 600, 850, 956, 1242, 1304, 1321
TauI GCSGC 1 cut(s) 1499
Tru1I TTAA 2 cut(s) 582, 611
Tru9I TTAA 2 cut(s) 582, 611
TscAI CASTG 3 cut(s) 235, 290, 1129
TseFI GTSAC 2 cut(s) 943, 1717
TseI GCWGC 2 cut(s) 560, 743
Tsp45I GTSAC 2 cut(s) 943, 1717
TspDTI ATGAA 8 cut(s) 42, 249, 764, 908, 1188, 1460, 1560, 1658
TspGWI ACGGA 1 cut(s) 1110
TspRI CASTG 3 cut(s) 235, 290, 1129
VpaK11BI GGWCC 1 cut(s) 1050
VspI ATTAAT 1 cut(s) 582
XapI RAATTY 6 cut(s) 600, 850, 956, 1242, 1304, 1321
XmnI GAANNNNTTC 2 cut(s) 980, 1179
XspI CTAG 2 cut(s) 243, 341
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.