WD repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G48870 AT1G48870 AT1G48870 |
| fragaria_vesca | FvH4_1g24010 FvH4_1g24010 |
| malus_domestica | MD01G1011600.v1.1 MD15G1338300.v1.1 MD15G1338400.v1.1 |
| prunus_persica | Prupe.6G159500_v2.0.a1 |
| pyrus_communis | pycom01g04160 |
| rosa_chinensis | RchiOBHm_Chr2g0120151 |
| rosa_laevigata | RLG00000018526 RLG00000020843 RLG00000027801 RLG00000035164 |
| rosa_multiflora | Rmu_co8333869.1_g000001 Rmu_co8364489.1_g000001 Rmu_sc0015469.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00123670 Rroxscaffold_7G00185390 |
| rosa_rugosa | Rorug02G0227100.1 Rorug02G0227200 |
| rosa_samantha | Rh2AG283800 Rh2BG295100 Rh2CG272500 Rh2DG308800 |
| rosa_wichuraiana | Rw2G022730 Rw5G023580 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 5 cut(s) | 972, 1622, 2270, 2504, 3830 |
| AarI | CACCTGC | 1 cut(s) | 1237 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 1135, 2474 |
| AatII | GACGTC | 1 cut(s) | 2630 |
| Acc16I | TGCGCA | 1 cut(s) | 1773 |
| Acc36I | ACCTGC | 1 cut(s) | 1237 |
| Acc65I | GGTACC | 1 cut(s) | 2791 |
| AccB1I | GGYRCC | 1 cut(s) | 2791 |
| AccBSI | CCGCTC | 1 cut(s) | 2649 |
| AccII | CGCG | 4 cut(s) | 1950, 2683, 2789, 3702 |
| AciI | CCGC | 6 cut(s) | 446, 1833, 1991, 2649, 2789, 3069 |
| AclWI | GGATC | 3 cut(s) | 359, 2200, 3424 |
| AcoI | YGGCCR | 3 cut(s) | 1813, 2008, 2798 |
| AcuI | CTGAAG | 1 cut(s) | 2348 |
| AcyI | GRCGYC | 3 cut(s) | 210, 2627, 3695 |
| AdeI | CACNNNGTG | 1 cut(s) | 1286 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 1123, 1967, 2801, 2921, 3944, 4015 |
| AflII | CTTAAG | 1 cut(s) | 1925 |
| AflIII | ACRYGT | 2 cut(s) | 3634, 3700 |
| AgeI | ACCGGT | 1 cut(s) | 2977 |
| AhlI | ACTAGT | 1 cut(s) | 2602 |
| AjiI | CACGTC | 1 cut(s) | 2148 |
| AjnI | CCWGG | 4 cut(s) | 1496, 2031, 2800, 3475 |
| Alw21I | GWGCWC | 1 cut(s) | 1172 |
| Alw26I | GTCTC | 3 cut(s) | 217, 1291, 2722 |
| AlwI | GGATC | 3 cut(s) | 359, 2200, 3424 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1679 |
| AoxI | GGCC | 9 cut(s) | 359, 1145, 1494, 1813, 2008, 2798, 2939, 4024, 4188 |
| AseI | ATTAAT | 3 cut(s) | 965, 995, 999 |
| AsiGI | ACCGGT | 1 cut(s) | 2977 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 3486 |
| Asp718I | GGTACC | 1 cut(s) | 2791 |
| AspLEI | GCGC | 3 cut(s) | 293, 1774, 3379 |
| AspS9I | GGNCC | 5 cut(s) | 138, 1114, 1145, 2912, 2940 |
| AsuC2I | CCSGG | 1 cut(s) | 2859 |
| AsuII | TTCGAA | 1 cut(s) | 1975 |
| AvaII | GGWCC | 3 cut(s) | 138, 1114, 2912 |
| AxyI | CCTNAGG | 1 cut(s) | 4192 |
| BalI | TGGCCA | 3 cut(s) | 1815, 2010, 2800 |
| BanI | GGYRCC | 1 cut(s) | 2791 |
| BanII | GRGCYC | 1 cut(s) | 1172 |
| BbsI | GAAGAC | 3 cut(s) | 1601, 2472, 3698 |
| Bbv12I | GWGCWC | 1 cut(s) | 1172 |
| BbvCI | CCTCAGC | 1 cut(s) | 1548 |
| BccI | CCATC | 4 cut(s) | 1805, 1835, 2195, 2288 |
| BciT130I | CCWGG | 4 cut(s) | 1498, 2033, 2802, 3477 |
| BciVI | GTATCC | 1 cut(s) | 3941 |
| BclI | TGATCA | 1 cut(s) | 1174 |
| BcnI | CCSGG | 1 cut(s) | 2859 |
| BcoDI | GTCTC | 3 cut(s) | 217, 1291, 2722 |
| BcuI | ACTAGT | 1 cut(s) | 2602 |
| BfaI | CTAG | 2 cut(s) | 1428, 2603 |
| BfmI | CTRYAG | 2 cut(s) | 276, 3398 |
| BfoI | RGCGCY | 1 cut(s) | 3380 |
| BfrI | CTTAAG | 1 cut(s) | 1925 |
| BfuAI | ACCTGC | 1 cut(s) | 1237 |
| BfuI | GTATCC | 1 cut(s) | 3941 |
| BlpI | GCTNAGC | 1 cut(s) | 1166 |
| BmcAI | AGTACT | 3 cut(s) | 37, 154, 4123 |
| Bme1390I | CCNGG | 5 cut(s) | 1498, 2033, 2802, 2859, 3477 |
| Bme18I | GGWCC | 3 cut(s) | 138, 1114, 2912 |
| BmgBI | CACGTC | 1 cut(s) | 2148 |
| BmgT120I | GGNCC | 5 cut(s) | 138, 1114, 1145, 2912, 2940 |
| BmiI | GGNNCC | 5 cut(s) | 1554, 2793, 3081, 3617, 3997 |
| BmrFI | CCNGG | 5 cut(s) | 1498, 2033, 2802, 2859, 3477 |
| BmrI | ACTGGG | 1 cut(s) | 2257 |
| BmuI | ACTGGG | 1 cut(s) | 2257 |
| BpiI | GAAGAC | 3 cut(s) | 1601, 2472, 3698 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1094, 1126 |
| BpmI | CTGGAG | 6 cut(s) | 376, 1161, 1539, 2867, 3917, 4052 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1548 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1166 |
| Bpu14I | TTCGAA | 1 cut(s) | 1975 |
| BpuEI | CTTGAG | 2 cut(s) | 1134, 1887 |
| BpuMI | CCSGG | 1 cut(s) | 2859 |
| Bsa29I | ATCGAT | 1 cut(s) | 2195 |
| BsaBI | GATNNNNATC | 1 cut(s) | 3766 |
| BsaHI | GRCGYC | 3 cut(s) | 210, 2627, 3695 |
| BsaJI | CCNNGG | 5 cut(s) | 2070, 2795, 3083, 3316, 3611 |
| BsaWI | WCCGGW | 1 cut(s) | 2977 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 460, 490, 1208, 1238, 1635, 1665 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 1123, 1967, 2801, 2921, 3944, 4015 |
| Bse118I | RCCGGY | 2 cut(s) | 2977, 3009 |
| Bse1I | ACTGG | 6 cut(s) | 794, 1816, 1834, 2252, 2428, 3152 |
| Bse21I | CCTNAGG | 1 cut(s) | 4192 |
| Bse3DI | GCAATG | 1 cut(s) | 2882 |
| Bse8I | GATNNNNATC | 1 cut(s) | 3766 |
| BseBI | CCWGG | 4 cut(s) | 1498, 2033, 2802, 3477 |
| BseCI | ATCGAT | 1 cut(s) | 2195 |
| BseDI | CCNNGG | 5 cut(s) | 2070, 2795, 3083, 3316, 3611 |
| BseJI | GATNNNNATC | 1 cut(s) | 3766 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 1123, 1967, 2801, 2921, 3944, 4015 |
| BseMI | GCAATG | 1 cut(s) | 2882 |
| BseMII | CTCAG | 5 cut(s) | 417, 906, 1157, 1539, 3500 |
| BseNI | ACTGG | 6 cut(s) | 794, 1816, 1834, 2252, 2428, 3152 |
| BseRI | GAGGAG | 2 cut(s) | 1268, 1656 |
| BseYI | CCCAGC | 1 cut(s) | 3788 |
| BsgI | GTGCAG | 3 cut(s) | 1215, 1728, 2938 |
| Bsh1236I | CGCG | 4 cut(s) | 1950, 2683, 2789, 3702 |
| BshFI | GGCC | 9 cut(s) | 361, 1147, 1496, 1815, 2010, 2800, 2941, 4026, 4190 |
| BshNI | GGYRCC | 1 cut(s) | 2791 |
| BshTI | ACCGGT | 1 cut(s) | 2977 |
| BshVI | ATCGAT | 1 cut(s) | 2195 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1172 |
| BsiSI | CCGG | 4 cut(s) | 2409, 2858, 2978, 3010 |
| BslFI | GGGAC | 8 cut(s) | 1141, 1791, 2235, 2369, 2711, 3102, 3173, 3542 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 1123, 1967, 2801, 2921, 3944, 4015 |
| BsmAI | GTCTC | 3 cut(s) | 217, 1291, 2722 |
| BsmBI | CGTCTC | 2 cut(s) | 217, 1291 |
| BsmFI | GGGAC | 8 cut(s) | 1141, 1791, 2235, 2369, 2711, 3102, 3173, 3542 |
| BsmI | GAATGC | 3 cut(s) | 1394, 2151, 2385 |
| BsnI | GGCC | 9 cut(s) | 361, 1147, 1496, 1815, 2010, 2800, 2941, 4026, 4190 |
| Bsp119I | TTCGAA | 1 cut(s) | 1975 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1172 |
| Bsp1407I | TGTACA | 1 cut(s) | 3333 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1166 |
| Bsp19I | CCATGG | 3 cut(s) | 2070, 3083, 3611 |
| BspACI | CCGC | 6 cut(s) | 446, 1833, 1991, 2649, 2789, 3069 |
| BspANI | GGCC | 9 cut(s) | 361, 1147, 1496, 1815, 2010, 2800, 2941, 4026, 4190 |
| BspCNI | CTCAG | 5 cut(s) | 418, 907, 1158, 1540, 3501 |
| BspDI | ATCGAT | 1 cut(s) | 2195 |
| BspFNI | CGCG | 4 cut(s) | 1950, 2683, 2789, 3702 |
| BspHI | TCATGA | 2 cut(s) | 3678, 3840 |
| BspLI | GGNNCC | 5 cut(s) | 1554, 2793, 3081, 3617, 3997 |
| BspMAI | CTGCAG | 1 cut(s) | 280 |
| BspMI | ACCTGC | 1 cut(s) | 1237 |
| BspPI | GGATC | 3 cut(s) | 359, 2200, 3424 |
| BspT104I | TTCGAA | 1 cut(s) | 1975 |
| BspT107I | GGYRCC | 1 cut(s) | 2791 |
| BspTI | CTTAAG | 1 cut(s) | 1925 |
| BsrBI | CCGCTC | 1 cut(s) | 2649 |
| BsrDI | GCAATG | 1 cut(s) | 2882 |
| BsrFI | RCCGGY | 2 cut(s) | 2977, 3009 |
| BsrGI | TGTACA | 1 cut(s) | 3333 |
| BsrI | ACTGG | 6 cut(s) | 794, 1816, 1834, 2252, 2428, 3152 |
| BssAI | RCCGGY | 2 cut(s) | 2977, 3009 |
| BssECI | CCNNGG | 5 cut(s) | 2070, 2795, 3083, 3316, 3611 |
| BssNI | GRCGYC | 3 cut(s) | 210, 2627, 3695 |
| BssT1I | CCWWGG | 5 cut(s) | 2070, 2795, 3083, 3316, 3611 |
| Bst2UI | CCWGG | 4 cut(s) | 1498, 2033, 2802, 3477 |
| Bst4CI | ACNGT | 9 cut(s) | 78, 106, 575, 658, 696, 745, 1617, 2083, 3313 |
| Bst6I | CTCTTC | 5 cut(s) | 1628, 1633, 2806, 2940, 3752 |
| BstACI | GRCGYC | 3 cut(s) | 210, 2627, 3695 |
| BstAFI | CTTAAG | 1 cut(s) | 1925 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2582 |
| BstAUI | TGTACA | 1 cut(s) | 3333 |
| BstBI | TTCGAA | 1 cut(s) | 1975 |
| BstC8I | GCNNGC | 3 cut(s) | 18, 514, 3659 |
| BstDEI | CTNAG | 9 cut(s) | 386, 426, 915, 1166, 1548, 3509, 3815, 4147, 4192 |
| BstDSI | CCRYGG | 3 cut(s) | 2070, 3083, 3611 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2799 |
| BstFNI | CGCG | 4 cut(s) | 1950, 2683, 2789, 3702 |
| BstH2I | RGCGCY | 1 cut(s) | 3380 |
| BstHHI | GCGC | 3 cut(s) | 293, 1774, 3379 |
| BstMAI | GTCTC | 3 cut(s) | 217, 1291, 2722 |
| BstNI | CCWGG | 4 cut(s) | 1498, 2033, 2802, 3477 |
| BstNSI | RCATGY | 3 cut(s) | 20, 65, 3638 |
| BstSCI | CCNGG | 5 cut(s) | 1496, 2031, 2800, 2857, 3475 |
| BstSFI | CTRYAG | 2 cut(s) | 276, 3398 |
| BstUI | CGCG | 4 cut(s) | 1950, 2683, 2789, 3702 |
| BstV2I | GAAGAC | 3 cut(s) | 1601, 2472, 3698 |
| BstX2I | RGATCY | 1 cut(s) | 351 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2423 |
| BstYI | RGATCY | 1 cut(s) | 351 |
| Bsu15I | ATCGAT | 1 cut(s) | 2195 |
| Bsu36I | CCTNAGG | 1 cut(s) | 4192 |
| BsuI | GTATCC | 1 cut(s) | 3941 |
| BsuRI | GGCC | 9 cut(s) | 361, 1147, 1496, 1815, 2010, 2800, 2941, 4026, 4190 |
| BsuTUI | ATCGAT | 1 cut(s) | 2195 |
| BtgI | CCRYGG | 3 cut(s) | 2070, 3083, 3611 |
| BtgZI | GCGATG | 1 cut(s) | 2034 |
| BtrI | CACGTC | 1 cut(s) | 2148 |
| BtsI | GCAGTG | 5 cut(s) | 423, 1399, 1740, 1759, 2110 |
| BtsIMutI | CAGTG | 7 cut(s) | 423, 741, 1399, 1740, 1759, 2110, 2421 |
| BveI | ACCTGC | 1 cut(s) | 1237 |
| Cac8I | GCNNGC | 3 cut(s) | 18, 514, 3659 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1679 |
| CciI | TCATGA | 2 cut(s) | 3678, 3840 |
| CfoI | GCGC | 3 cut(s) | 293, 1774, 3379 |
| Cfr10I | RCCGGY | 2 cut(s) | 2977, 3009 |
| Cfr13I | GGNCC | 5 cut(s) | 138, 1114, 1145, 2912, 2940 |
| ClaI | ATCGAT | 1 cut(s) | 2195 |
| CpoI | CGGWCCG | 1 cut(s) | 1114 |
| CseI | GACGC | 4 cut(s) | 199, 3212, 3574, 3703 |
| CspAI | ACCGGT | 1 cut(s) | 2977 |
| CspI | CGGWCCG | 1 cut(s) | 1114 |
| DdeI | CTNAG | 9 cut(s) | 386, 426, 915, 1166, 1548, 3509, 3815, 4147, 4192 |
| DraI | TTTAAA | 2 cut(s) | 340, 1005 |
| DraIII | CACNNNGTG | 1 cut(s) | 1286 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 1135, 2474 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 1135, 2474 |
| EaeI | YGGCCR | 3 cut(s) | 1813, 2008, 2798 |
| Eam1104I | CTCTTC | 5 cut(s) | 1628, 1633, 2806, 2940, 3752 |
| EarI | CTCTTC | 5 cut(s) | 1628, 1633, 2806, 2940, 3752 |
| Ecl136II | GAGCTC | 1 cut(s) | 1170 |
| Eco130I | CCWWGG | 5 cut(s) | 2070, 2795, 3083, 3316, 3611 |
| Eco147I | AGGCCT | 1 cut(s) | 361 |
| Eco24I | GRGCYC | 1 cut(s) | 1172 |
| Eco47I | GGWCC | 3 cut(s) | 138, 1114, 2912 |
| Eco53kI | GAGCTC | 1 cut(s) | 1170 |
| Eco57I | CTGAAG | 1 cut(s) | 2348 |
| Eco81I | CCTNAGG | 1 cut(s) | 4192 |
| EcoICRI | GAGCTC | 1 cut(s) | 1170 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2799 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1145 |
| EcoRI | GAATTC | 3 cut(s) | 1573, 1977, 3295 |
| EcoRII | CCWGG | 4 cut(s) | 1496, 2031, 2800, 3475 |
| EcoT14I | CCWWGG | 5 cut(s) | 2070, 2795, 3083, 3316, 3611 |
| EcoT22I | ATGCAT | 1 cut(s) | 3767 |
| EcoT38I | GRGCYC | 1 cut(s) | 1172 |
| ErhI | CCWWGG | 5 cut(s) | 2070, 2795, 3083, 3316, 3611 |
| Esp3I | CGTCTC | 2 cut(s) | 217, 1291 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2937, 2969 |
| FaqI | GGGAC | 8 cut(s) | 1141, 1791, 2235, 2369, 2711, 3102, 3173, 3542 |
| FauI | CCCGC | 1 cut(s) | 2642 |
| FauNDI | CATATG | 1 cut(s) | 2581 |
| FbaI | TGATCA | 1 cut(s) | 1174 |
| FriOI | GRGCYC | 1 cut(s) | 1172 |
| FspAI | RTGCGCAY | 1 cut(s) | 1773 |
| FspBI | CTAG | 2 cut(s) | 1428, 2603 |
| FspI | TGCGCA | 1 cut(s) | 1773 |
| GlaI | GCGC | 3 cut(s) | 292, 1773, 3378 |
| GsaI | CCCAGC | 1 cut(s) | 3792 |
| GsuI | CTGGAG | 6 cut(s) | 376, 1161, 1539, 2867, 3917, 4052 |
| HaeII | RGCGCY | 1 cut(s) | 3380 |
| HaeIII | GGCC | 9 cut(s) | 361, 1147, 1496, 1815, 2010, 2800, 2941, 4026, 4190 |
| HapII | CCGG | 4 cut(s) | 2409, 2858, 2978, 3010 |
| HgaI | GACGC | 4 cut(s) | 199, 3212, 3574, 3703 |
| HhaI | GCGC | 3 cut(s) | 293, 1774, 3379 |
| Hin1I | GRCGYC | 3 cut(s) | 210, 2627, 3695 |
| Hin6I | GCGC | 3 cut(s) | 291, 1772, 3377 |
| HinP1I | GCGC | 3 cut(s) | 291, 1772, 3377 |
| HincII | GTYRAC | 4 cut(s) | 874, 1099, 2170, 3002 |
| HindII | GTYRAC | 4 cut(s) | 874, 1099, 2170, 3002 |
| HindIII | AAGCTT | 1 cut(s) | 169 |
| HpaI | GTTAAC | 2 cut(s) | 874, 1099 |
| HpaII | CCGG | 4 cut(s) | 2409, 2858, 2978, 3010 |
| Hpy166II | GTNNAC | 6 cut(s) | 74, 874, 1099, 1740, 2170, 3002 |
| Hpy8I | GTNNAC | 6 cut(s) | 74, 874, 1099, 1740, 2170, 3002 |
| Hpy99I | CGWCG | 3 cut(s) | 618, 903, 3568 |
| HpyAV | CCTTC | 7 cut(s) | 954, 1434, 1539, 1699, 2768, 3781, 4037 |
| HpyCH4III | ACNGT | 9 cut(s) | 78, 106, 575, 658, 696, 745, 1617, 2083, 3313 |
| HpyCH4IV | ACGT | 6 cut(s) | 613, 2147, 2627, 3016, 3969, 4048 |
| HpyF3I | CTNAG | 9 cut(s) | 386, 426, 915, 1166, 1548, 3509, 3815, 4147, 4192 |
| HpySE526I | ACGT | 6 cut(s) | 613, 2147, 2627, 3016, 3969, 4048 |
| Hsp92I | GRCGYC | 3 cut(s) | 210, 2627, 3695 |
| HspAI | GCGC | 3 cut(s) | 291, 1772, 3377 |
| KpnI | GGTACC | 1 cut(s) | 2795 |
| Ksp22I | TGATCA | 1 cut(s) | 1174 |
| KspAI | GTTAAC | 2 cut(s) | 874, 1099 |
| LmnI | GCTCC | 8 cut(s) | 261, 1397, 1558, 2823, 2860, 3503, 3621, 3898 |
| MaeI | CTAG | 2 cut(s) | 1428, 2603 |
| MaeII | ACGT | 6 cut(s) | 613, 2147, 2627, 3016, 3969, 4048 |
| MbiI | CCGCTC | 1 cut(s) | 2649 |
| MflI | RGATCY | 1 cut(s) | 351 |
| MhlI | GDGCHC | 1 cut(s) | 1172 |
| MlsI | TGGCCA | 3 cut(s) | 1815, 2010, 2800 |
| MluI | ACGCGT | 1 cut(s) | 3700 |
| MluNI | TGGCCA | 3 cut(s) | 1815, 2010, 2800 |
| MlyI | GAGTC | 9 cut(s) | 447, 1205, 1495, 1994, 2217, 2462, 2672, 2921, 3853 |
| MmeI | TCCRAC | 1 cut(s) | 2650 |
| Mox20I | TGGCCA | 3 cut(s) | 1815, 2010, 2800 |
| Mph1103I | ATGCAT | 1 cut(s) | 3767 |
| MroXI | GAANNNNTTC | 1 cut(s) | 3486 |
| MscI | TGGCCA | 3 cut(s) | 1815, 2010, 2800 |
| MslI | CAYNNNNRTG | 4 cut(s) | 146, 1790, 2340, 3199 |
| Msp20I | TGGCCA | 3 cut(s) | 1815, 2010, 2800 |
| MspA1I | CMGCKG | 4 cut(s) | 711, 1993, 2368, 3071 |
| MspCI | CTTAAG | 1 cut(s) | 1925 |
| MspI | CCGG | 4 cut(s) | 2409, 2858, 2978, 3010 |
| MspR9I | CCNGG | 5 cut(s) | 1498, 2033, 2802, 2859, 3477 |
| Mva1269I | GAATGC | 3 cut(s) | 1394, 2151, 2385 |
| MvaI | CCWGG | 4 cut(s) | 1498, 2033, 2802, 3477 |
| MvnI | CGCG | 4 cut(s) | 1950, 2683, 2789, 3702 |
| NciI | CCSGG | 1 cut(s) | 2859 |
| NcoI | CCATGG | 3 cut(s) | 2070, 3083, 3611 |
| NdeI | CATATG | 1 cut(s) | 2581 |
| NlaIV | GGNNCC | 5 cut(s) | 1554, 2793, 3081, 3617, 3997 |
| NmuCI | GTSAC | 6 cut(s) | 1153, 1224, 1986, 2108, 2143, 3113 |
| NsbI | TGCGCA | 1 cut(s) | 1773 |
| NsiI | ATGCAT | 1 cut(s) | 3767 |
| NspI | RCATGY | 3 cut(s) | 20, 65, 3638 |
| NspV | TTCGAA | 1 cut(s) | 1975 |
| PacI | TTAATTAA | 1 cut(s) | 999 |
| PaeI | GCATGC | 1 cut(s) | 20 |
| PagI | TCATGA | 2 cut(s) | 3678, 3840 |
| PaqCI | CACCTGC | 1 cut(s) | 1237 |
| PceI | AGGCCT | 1 cut(s) | 361 |
| PciI | ACATGT | 1 cut(s) | 3634 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 4054 |
| PctI | GAATGC | 3 cut(s) | 1394, 2151, 2385 |
| PdmI | GAANNNNTTC | 1 cut(s) | 3486 |
| PfeI | GAWTC | 5 cut(s) | 1340, 2870, 3074, 3159, 3482 |
| PfoI | TCCNGGA | 1 cut(s) | 2857 |
| PinAI | ACCGGT | 1 cut(s) | 2977 |
| PleI | GAGTC | 9 cut(s) | 447, 1205, 1495, 1993, 2217, 2462, 2672, 2921, 3852 |
| PpsI | GAGTC | 9 cut(s) | 447, 1205, 1495, 1993, 2217, 2462, 2672, 2921, 3852 |
| PscI | ACATGT | 1 cut(s) | 3634 |
| PshBI | ATTAAT | 3 cut(s) | 965, 995, 999 |
| PsiI | TTATAA | 5 cut(s) | 972, 1622, 2270, 2504, 3830 |
| Psp124BI | GAGCTC | 1 cut(s) | 1172 |
| Psp6I | CCWGG | 4 cut(s) | 1496, 2031, 2800, 3475 |
| PspFI | CCCAGC | 1 cut(s) | 3788 |
| PspGI | CCWGG | 4 cut(s) | 1496, 2031, 2800, 3475 |
| PspN4I | GGNNCC | 5 cut(s) | 1554, 2793, 3081, 3617, 3997 |
| PspPI | GGNCC | 5 cut(s) | 138, 1114, 1145, 2912, 2940 |
| PstI | CTGCAG | 1 cut(s) | 280 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1679 |
| PsuI | RGATCY | 1 cut(s) | 351 |
| PvuII | CAGCTG | 2 cut(s) | 711, 2368 |
| RseI | CAYNNNNRTG | 4 cut(s) | 146, 1790, 2340, 3199 |
| Rsr2I | CGGWCCG | 1 cut(s) | 1114 |
| RsrII | CGGWCCG | 1 cut(s) | 1114 |
| SacI | GAGCTC | 1 cut(s) | 1172 |
| Sau96I | GGNCC | 5 cut(s) | 138, 1114, 1145, 2912, 2940 |
| ScaI | AGTACT | 3 cut(s) | 37, 154, 4123 |
| SchI | GAGTC | 9 cut(s) | 447, 1205, 1495, 1994, 2217, 2462, 2672, 2921, 3853 |
| ScrFI | CCNGG | 5 cut(s) | 1498, 2033, 2802, 2859, 3477 |
| SduI | GDGCHC | 1 cut(s) | 1172 |
| SfcI | CTRYAG | 2 cut(s) | 276, 3398 |
| SfuI | TTCGAA | 1 cut(s) | 1975 |
| SinI | GGWCC | 3 cut(s) | 138, 1114, 2912 |
| SmiI | ATTTAAAT | 1 cut(s) | 1005 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 146, 1790, 2340, 3199 |
| SmlI | CTYRAG | 3 cut(s) | 1149, 1902, 1925 |
| SmoI | CTYRAG | 3 cut(s) | 1149, 1902, 1925 |
| SpeI | ACTAGT | 1 cut(s) | 2602 |
| SphI | GCATGC | 1 cut(s) | 20 |
| SseBI | AGGCCT | 1 cut(s) | 361 |
| SsiI | CCGC | 6 cut(s) | 446, 1833, 1991, 2649, 2789, 3069 |
| SspI | AATATT | 2 cut(s) | 314, 860 |
| SspMI | CTAG | 2 cut(s) | 1428, 2603 |
| SstI | GAGCTC | 1 cut(s) | 1172 |
| StuI | AGGCCT | 1 cut(s) | 361 |
| StyD4I | CCNGG | 5 cut(s) | 1496, 2031, 2800, 2857, 3475 |
| StyI | CCWWGG | 5 cut(s) | 2070, 2795, 3083, 3316, 3611 |
| SwaI | ATTTAAAT | 1 cut(s) | 1005 |
| TaaI | ACNGT | 9 cut(s) | 78, 106, 575, 658, 696, 745, 1617, 2083, 3313 |
| TaiI | ACGT | 6 cut(s) | 616, 2150, 2630, 3019, 3972, 4051 |
| TaqII | GACCGA | 3 cut(s) | 464, 1102, 2096 |
| TatI | WGTACW | 8 cut(s) | 35, 71, 152, 696, 1257, 2605, 3333, 4121 |
| TauI | GCSGC | 1 cut(s) | 448 |
| TfiI | GAWTC | 5 cut(s) | 1340, 2870, 3074, 3159, 3482 |
| TscAI | CASTG | 7 cut(s) | 423, 748, 1399, 1747, 1759, 2117, 2428 |
| TseFI | GTSAC | 6 cut(s) | 1153, 1224, 1986, 2108, 2143, 3113 |
| Tsp45I | GTSAC | 6 cut(s) | 1153, 1224, 1986, 2108, 2143, 3113 |
| TspGWI | ACGGA | 6 cut(s) | 1106, 2468, 2505, 2904, 3132, 3159 |
| TspRI | CASTG | 7 cut(s) | 423, 748, 1399, 1747, 1759, 2117, 2428 |
| Vha464I | CTTAAG | 1 cut(s) | 1925 |
| VpaK11BI | GGWCC | 3 cut(s) | 138, 1114, 2912 |
| VspI | ATTAAT | 3 cut(s) | 965, 995, 999 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2799 |
| XceI | RCATGY | 3 cut(s) | 20, 65, 3638 |
| XmnI | GAANNNNTTC | 1 cut(s) | 3486 |
| XspI | CTAG | 2 cut(s) | 1428, 2603 |
| ZraI | GACGTC | 1 cut(s) | 2628 |
| ZrmI | AGTACT | 3 cut(s) | 37, 154, 4123 |
| Zsp2I | ATGCAT | 1 cut(s) | 3767 |