exoribonuclease
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G54490 AT1G54490 |
| fragaria_vesca | FvH4_6g03690 FvH4_6g03690 |
| malus_domestica | MD04G1219200.v1.1 MD12G1236200.v1.1 |
| prunus_persica | Prupe.6G338500_v2.0.a1 Prupe.6G338500_v2.0.a1 |
| pyrus_communis | pycom04g19450 pycom12g21730 |
| rosa_chinensis | RchiOBHm_Chr3g0452231 |
| rosa_laevigata | RLG00000025615 |
| rosa_multiflora | Rmu_sc0037132.1_g000001 Rmu_sc0041263.1_g000001 |
| rosa_roxburghii | Rroxscaffold_164G00435930 Rroxscaffold_6G00429350 |
| rosa_rugosa | Rorug02G0639400 |
| rosa_samantha | Rh3AG041300 Rh3BG043000 Rh3BG043200 Rh3CG041400 Rh3CG041600 Rh3DG042300 Rh3DG042500 |
| rosa_wichuraiana | Rw3G003160 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 223 |
| AatII | GACGTC | 2 cut(s) | 63, 2141 |
| Acc36I | ACCTGC | 1 cut(s) | 223 |
| Acc65I | GGTACC | 1 cut(s) | 1282 |
| AccB1I | GGYRCC | 1 cut(s) | 1282 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 1582, 2513, 2700 |
| AccBSI | CCGCTC | 1 cut(s) | 1853 |
| AccII | CGCG | 1 cut(s) | 1216 |
| AccIII | TCCGGA | 1 cut(s) | 2122 |
| AciI | CCGC | 6 cut(s) | 444, 1216, 1851, 1870, 2216, 2309 |
| AclI | AACGTT | 1 cut(s) | 2477 |
| AclWI | GGATC | 4 cut(s) | 662, 947, 1640, 2711 |
| AcoI | YGGCCR | 2 cut(s) | 814, 942 |
| AcsI | RAATTY | 6 cut(s) | 143, 1053, 1355, 1667, 1942, 2668 |
| AcuI | CTGAAG | 5 cut(s) | 219, 408, 509, 810, 1491 |
| AcyI | GRCGYC | 3 cut(s) | 60, 2138, 2194 |
| AfeI | AGCGCT | 1 cut(s) | 1709 |
| AflII | CTTAAG | 2 cut(s) | 754, 1514 |
| AgsI | TTSAA | 8 cut(s) | 68, 474, 597, 1172, 1421, 1784, 2643, 2674 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 639, 671 |
| AleI | CACNNNNGTG | 1 cut(s) | 2571 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2528, 2560 |
| Alw21I | GWGCWC | 1 cut(s) | 2395 |
| Alw26I | GTCTC | 2 cut(s) | 647, 2409 |
| AlwI | GGATC | 4 cut(s) | 662, 947, 1640, 2711 |
| AlwNI | CAGNNNCTG | 5 cut(s) | 386, 866, 901, 1133, 2657 |
| Ama87I | CYCGRG | 2 cut(s) | 2205, 2434 |
| Aor13HI | TCCGGA | 1 cut(s) | 2122 |
| Aor51HI | AGCGCT | 1 cut(s) | 1709 |
| AoxI | GGCC | 7 cut(s) | 430, 814, 942, 1864, 2213, 2240, 2805 |
| ApoI | RAATTY | 6 cut(s) | 143, 1053, 1355, 1667, 1942, 2668 |
| AseI | ATTAAT | 1 cut(s) | 2321 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1920, 1991 |
| Asp718I | GGTACC | 1 cut(s) | 1282 |
| AspLEI | GCGC | 3 cut(s) | 322, 1615, 1710 |
| AspS9I | GGNCC | 7 cut(s) | 430, 492, 1270, 1864, 2240, 2399, 2489 |
| AsuC2I | CCSGG | 3 cut(s) | 606, 2355, 2397 |
| AsuHPI | GGTGA | 4 cut(s) | 107, 109, 1148, 2679 |
| AsuII | TTCGAA | 1 cut(s) | 141 |
| AvaI | CYCGRG | 2 cut(s) | 2205, 2434 |
| AvaII | GGWCC | 4 cut(s) | 492, 1270, 2399, 2489 |
| BalI | TGGCCA | 2 cut(s) | 816, 944 |
| BanI | GGYRCC | 1 cut(s) | 1282 |
| BanII | GRGCYC | 1 cut(s) | 1560 |
| BbsI | GAAGAC | 2 cut(s) | 1913, 2184 |
| Bbv12I | GWGCWC | 1 cut(s) | 2395 |
| BbvCI | CCTCAGC | 1 cut(s) | 393 |
| BceAI | ACGGC | 3 cut(s) | 151, 695, 2635 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 332, 366 |
| BciVI | GTATCC | 2 cut(s) | 2330, 2732 |
| BclI | TGATCA | 2 cut(s) | 966, 2271 |
| BcnI | CCSGG | 3 cut(s) | 606, 2355, 2397 |
| BcoDI | GTCTC | 2 cut(s) | 647, 2409 |
| BfaI | CTAG | 5 cut(s) | 543, 1148, 1263, 1947, 2001 |
| BfmI | CTRYAG | 5 cut(s) | 19, 306, 1877, 2232, 2743 |
| BfoI | RGCGCY | 1 cut(s) | 1711 |
| BfrI | CTTAAG | 2 cut(s) | 754, 1514 |
| BfuAI | ACCTGC | 1 cut(s) | 223 |
| BfuI | GTATCC | 2 cut(s) | 2330, 2732 |
| BglII | AGATCT | 3 cut(s) | 1259, 1510, 2130 |
| BmcAI | AGTACT | 1 cut(s) | 1883 |
| Bme18I | GGWCC | 4 cut(s) | 492, 1270, 2399, 2489 |
| BmeT110I | CYCGRG | 2 cut(s) | 2205, 2434 |
| BmgT120I | GGNCC | 7 cut(s) | 430, 492, 1270, 1864, 2240, 2399, 2489 |
| BmiI | GGNNCC | 7 cut(s) | 493, 494, 1271, 1272, 1284, 1588, 2400 |
| BmrI | ACTGGG | 1 cut(s) | 1871 |
| BmsI | GCATC | 3 cut(s) | 691, 1071, 1815 |
| BmuI | ACTGGG | 1 cut(s) | 1871 |
| BpiI | GAAGAC | 2 cut(s) | 1913, 2184 |
| BpmI | CTGGAG | 2 cut(s) | 586, 1641 |
| Bpu10I | CCTNAGC | 2 cut(s) | 393, 724 |
| Bpu14I | TTCGAA | 1 cut(s) | 141 |
| BpuMI | CCSGG | 3 cut(s) | 606, 2355, 2397 |
| Bsa29I | ATCGAT | 1 cut(s) | 2606 |
| BsaAI | YACGTR | 2 cut(s) | 222, 1843 |
| BsaHI | GRCGYC | 3 cut(s) | 60, 2138, 2194 |
| BsaWI | WCCGGW | 4 cut(s) | 1629, 2122, 2412, 2532 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2528, 2558 |
| Bse118I | RCCGGY | 3 cut(s) | 10, 1440, 1594 |
| Bse1I | ACTGG | 5 cut(s) | 817, 1053, 1576, 1866, 2308 |
| Bse3DI | GCAATG | 1 cut(s) | 1478 |
| BseAI | TCCGGA | 1 cut(s) | 2122 |
| BseCI | ATCGAT | 1 cut(s) | 2606 |
| BseGI | GGATG | 8 cut(s) | 181, 193, 534, 706, 1652, 1855, 1935, 2755 |
| BseMI | GCAATG | 1 cut(s) | 1478 |
| BseMII | CTCAG | 5 cut(s) | 384, 1269, 1341, 1374, 2109 |
| BseNI | ACTGG | 5 cut(s) | 817, 1053, 1576, 1866, 2308 |
| BseRI | GAGGAG | 2 cut(s) | 1763, 2124 |
| BseYI | CCCAGC | 1 cut(s) | 1431 |
| BsgI | GTGCAG | 1 cut(s) | 195 |
| Bsh1236I | CGCG | 1 cut(s) | 1216 |
| BshFI | GGCC | 7 cut(s) | 432, 816, 944, 1866, 2215, 2242, 2807 |
| BshNI | GGYRCC | 1 cut(s) | 1282 |
| BshVI | ATCGAT | 1 cut(s) | 2606 |
| BsiHKAI | GWGCWC | 1 cut(s) | 2395 |
| BsiHKCI | CYCGRG | 2 cut(s) | 2205, 2434 |
| BsiWI | CGTACG | 1 cut(s) | 222 |
| BslFI | GGGAC | 2 cut(s) | 505, 1283 |
| BsmAI | GTCTC | 2 cut(s) | 647, 2409 |
| BsmBI | CGTCTC | 2 cut(s) | 647, 2409 |
| BsmFI | GGGAC | 2 cut(s) | 505, 1283 |
| BsnI | GGCC | 7 cut(s) | 432, 816, 944, 1866, 2215, 2242, 2807 |
| BsoBI | CYCGRG | 2 cut(s) | 2205, 2434 |
| Bsp119I | TTCGAA | 1 cut(s) | 141 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1560, 2395 |
| Bsp13I | TCCGGA | 1 cut(s) | 2122 |
| Bsp19I | CCATGG | 1 cut(s) | 1925 |
| BspACI | CCGC | 6 cut(s) | 444, 1216, 1851, 1870, 2216, 2309 |
| BspANI | GGCC | 7 cut(s) | 432, 816, 944, 1866, 2215, 2242, 2807 |
| BspCNI | CTCAG | 5 cut(s) | 385, 1270, 1342, 1375, 2108 |
| BspDI | ATCGAT | 1 cut(s) | 2606 |
| BspEI | TCCGGA | 1 cut(s) | 2122 |
| BspFNI | CGCG | 1 cut(s) | 1216 |
| BspLI | GGNNCC | 7 cut(s) | 493, 494, 1271, 1272, 1284, 1588, 2400 |
| BspMAI | CTGCAG | 1 cut(s) | 1881 |
| BspMI | ACCTGC | 1 cut(s) | 223 |
| BspPI | GGATC | 4 cut(s) | 662, 947, 1640, 2711 |
| BspQI | GCTCTTC | 1 cut(s) | 528 |
| BspT104I | TTCGAA | 1 cut(s) | 141 |
| BspT107I | GGYRCC | 1 cut(s) | 1282 |
| BspTI | CTTAAG | 2 cut(s) | 754, 1514 |
| BsrBI | CCGCTC | 1 cut(s) | 1853 |
| BsrDI | GCAATG | 1 cut(s) | 1478 |
| BsrFI | RCCGGY | 3 cut(s) | 10, 1440, 1594 |
| BsrI | ACTGG | 5 cut(s) | 817, 1053, 1576, 1866, 2308 |
| BssAI | RCCGGY | 3 cut(s) | 10, 1440, 1594 |
| BssNI | GRCGYC | 3 cut(s) | 60, 2138, 2194 |
| BssT1I | CCWWGG | 3 cut(s) | 1453, 1925, 1951 |
| Bst4CI | ACNGT | 7 cut(s) | 513, 1227, 1798, 1820, 1964, 2573, 2765 |
| Bst6I | CTCTTC | 2 cut(s) | 393, 528 |
| BstACI | GRCGYC | 3 cut(s) | 60, 2138, 2194 |
| BstAFI | CTTAAG | 2 cut(s) | 754, 1514 |
| BstBAI | YACGTR | 2 cut(s) | 222, 1843 |
| BstBI | TTCGAA | 1 cut(s) | 141 |
| BstC8I | GCNNGC | 5 cut(s) | 30, 210, 1596, 1603, 1868 |
| BstDEI | CTNAG | 6 cut(s) | 393, 724, 1278, 1350, 1383, 2095 |
| BstDSI | CCRYGG | 2 cut(s) | 1925, 2572 |
| BstEII | GGTNACC | 1 cut(s) | 95 |
| BstF5I | GGATG | 8 cut(s) | 181, 193, 534, 706, 1652, 1855, 1935, 2755 |
| BstFNI | CGCG | 1 cut(s) | 1216 |
| BstH2I | RGCGCY | 1 cut(s) | 1711 |
| BstHHI | GCGC | 3 cut(s) | 322, 1615, 1710 |
| BstMAI | GTCTC | 2 cut(s) | 647, 2409 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 326, 374, 383, 1437, 1502, 1876, 2193, 2663 |
| BstNSI | RCATGY | 2 cut(s) | 1088, 1906 |
| BstPI | GGTNACC | 1 cut(s) | 95 |
| BstSFI | CTRYAG | 5 cut(s) | 19, 306, 1877, 2232, 2743 |
| BstSNI | TACGTA | 1 cut(s) | 1843 |
| BstUI | CGCG | 1 cut(s) | 1216 |
| BstV2I | GAAGAC | 2 cut(s) | 1913, 2184 |
| BstX2I | RGATCY | 4 cut(s) | 952, 1259, 1510, 2130 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 560 |
| BstYI | RGATCY | 4 cut(s) | 952, 1259, 1510, 2130 |
| Bsu15I | ATCGAT | 1 cut(s) | 2606 |
| BsuI | GTATCC | 2 cut(s) | 2330, 2732 |
| BsuRI | GGCC | 7 cut(s) | 432, 816, 944, 1866, 2215, 2242, 2807 |
| BsuTUI | ATCGAT | 1 cut(s) | 2606 |
| BtgI | CCRYGG | 2 cut(s) | 1925, 2572 |
| BtsCI | GGATG | 8 cut(s) | 181, 193, 534, 706, 1652, 1855, 1935, 2755 |
| BtsIMutI | CAGTG | 4 cut(s) | 1046, 1825, 1859, 2770 |
| BveI | ACCTGC | 1 cut(s) | 223 |
| Cac8I | GCNNGC | 5 cut(s) | 30, 210, 1596, 1603, 1868 |
| CaiI | CAGNNNCTG | 5 cut(s) | 386, 866, 901, 1133, 2657 |
| CfoI | GCGC | 3 cut(s) | 322, 1615, 1710 |
| Cfr10I | RCCGGY | 3 cut(s) | 10, 1440, 1594 |
| Cfr13I | GGNCC | 7 cut(s) | 430, 492, 1270, 1864, 2240, 2399, 2489 |
| ClaI | ATCGAT | 1 cut(s) | 2606 |
| CseI | GACGC | 3 cut(s) | 269, 383, 2202 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2557, 2592 |
| DdeI | CTNAG | 6 cut(s) | 393, 724, 1278, 1350, 1383, 2095 |
| DraI | TTTAAA | 2 cut(s) | 238, 1564 |
| EaeI | YGGCCR | 2 cut(s) | 814, 942 |
| Eam1104I | CTCTTC | 2 cut(s) | 393, 528 |
| EarI | CTCTTC | 2 cut(s) | 393, 528 |
| Eco105I | TACGTA | 1 cut(s) | 1843 |
| Eco130I | CCWWGG | 3 cut(s) | 1453, 1925, 1951 |
| Eco24I | GRGCYC | 1 cut(s) | 1560 |
| Eco32I | GATATC | 2 cut(s) | 115, 2498 |
| Eco47I | GGWCC | 4 cut(s) | 492, 1270, 2399, 2489 |
| Eco47III | AGCGCT | 1 cut(s) | 1709 |
| Eco57I | CTGAAG | 5 cut(s) | 219, 408, 509, 810, 1491 |
| Eco88I | CYCGRG | 2 cut(s) | 2205, 2434 |
| Eco91I | GGTNACC | 1 cut(s) | 95 |
| EcoO109I | RGGNCCY | 3 cut(s) | 492, 1270, 2240 |
| EcoO65I | GGTNACC | 1 cut(s) | 95 |
| EcoRI | GAATTC | 1 cut(s) | 1942 |
| EcoRV | GATATC | 2 cut(s) | 115, 2498 |
| EcoT14I | CCWWGG | 3 cut(s) | 1453, 1925, 1951 |
| EcoT22I | ATGCAT | 2 cut(s) | 1086, 2036 |
| EcoT38I | GRGCYC | 1 cut(s) | 1560 |
| ErhI | CCWWGG | 3 cut(s) | 1453, 1925, 1951 |
| Esp3I | CGTCTC | 2 cut(s) | 647, 2409 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2485, 2517 |
| FaqI | GGGAC | 2 cut(s) | 505, 1283 |
| FauI | CCCGC | 1 cut(s) | 1858 |
| FauNDI | CATATG | 1 cut(s) | 1038 |
| FbaI | TGATCA | 2 cut(s) | 966, 2271 |
| FokI | GGATG | 8 cut(s) | 168, 180, 521, 713, 1639, 1842, 1942, 2762 |
| FriOI | GRGCYC | 1 cut(s) | 1560 |
| FspBI | CTAG | 5 cut(s) | 543, 1148, 1263, 1947, 2001 |
| GlaI | GCGC | 3 cut(s) | 321, 1614, 1709 |
| GsaI | CCCAGC | 1 cut(s) | 1435 |
| GsuI | CTGGAG | 2 cut(s) | 586, 1641 |
| HaeII | RGCGCY | 1 cut(s) | 1711 |
| HaeIII | GGCC | 7 cut(s) | 432, 816, 944, 1866, 2215, 2242, 2807 |
| HgaI | GACGC | 3 cut(s) | 269, 383, 2202 |
| HhaI | GCGC | 3 cut(s) | 322, 1615, 1710 |
| Hin1I | GRCGYC | 3 cut(s) | 60, 2138, 2194 |
| Hin6I | GCGC | 3 cut(s) | 320, 1613, 1708 |
| HinP1I | GCGC | 3 cut(s) | 320, 1613, 1708 |
| HindIII | AAGCTT | 2 cut(s) | 1778, 2418 |
| HphI | GGTGA | 4 cut(s) | 107, 109, 1148, 2679 |
| Hpy166II | GTNNAC | 7 cut(s) | 742, 806, 1090, 1104, 1846, 2579, 2711 |
| Hpy188I | TCNGA | 9 cut(s) | 285, 362, 592, 829, 1206, 1279, 1510, 2098, 2271 |
| Hpy8I | GTNNAC | 7 cut(s) | 742, 806, 1090, 1104, 1846, 2579, 2711 |
| Hpy99I | CGWCG | 3 cut(s) | 65, 357, 2196 |
| HpyAV | CCTTC | 5 cut(s) | 194, 605, 1260, 1415, 2253 |
| HpyCH4III | ACNGT | 7 cut(s) | 513, 1227, 1798, 1820, 1964, 2573, 2765 |
| HpyCH4IV | ACGT | 7 cut(s) | 60, 221, 355, 649, 1842, 2138, 2477 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 326, 374, 383, 1437, 1502, 1876, 2193, 2663 |
| HpyF3I | CTNAG | 6 cut(s) | 393, 724, 1278, 1350, 1383, 2095 |
| HpySE526I | ACGT | 7 cut(s) | 60, 221, 355, 649, 1842, 2138, 2477 |
| Hsp92I | GRCGYC | 3 cut(s) | 60, 2138, 2194 |
| HspAI | GCGC | 3 cut(s) | 320, 1613, 1708 |
| KflI | GGGWCCC | 2 cut(s) | 492, 1270 |
| Kpn2I | TCCGGA | 1 cut(s) | 2122 |
| KpnI | GGTACC | 1 cut(s) | 1286 |
| KroI | GCCGGC | 1 cut(s) | 1594 |
| KroNI | GCCGGC | 1 cut(s) | 1596 |
| Ksp22I | TGATCA | 2 cut(s) | 966, 2271 |
| LguI | GCTCTTC | 1 cut(s) | 528 |
| LmnI | GCTCC | 4 cut(s) | 1501, 2111, 2228, 2585 |
| LweI | GCATC | 3 cut(s) | 691, 1071, 1815 |
| MaeI | CTAG | 5 cut(s) | 543, 1148, 1263, 1947, 2001 |
| MaeII | ACGT | 7 cut(s) | 60, 221, 355, 649, 1842, 2138, 2477 |
| MaeIII | GTNAC | 4 cut(s) | 56, 95, 2059, 2517 |
| MbiI | CCGCTC | 1 cut(s) | 1853 |
| MfeI | CAATTG | 1 cut(s) | 2633 |
| MflI | RGATCY | 4 cut(s) | 952, 1259, 1510, 2130 |
| MhlI | GDGCHC | 2 cut(s) | 1560, 2395 |
| MlsI | TGGCCA | 2 cut(s) | 816, 944 |
| MluNI | TGGCCA | 2 cut(s) | 816, 944 |
| MlyI | GAGTC | 2 cut(s) | 2385, 2426 |
| MmeI | TCCRAC | 2 cut(s) | 670, 2206 |
| Mox20I | TGGCCA | 2 cut(s) | 816, 944 |
| Mph1103I | ATGCAT | 2 cut(s) | 1086, 2036 |
| MroI | TCCGGA | 1 cut(s) | 2122 |
| MroNI | GCCGGC | 1 cut(s) | 1594 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1920, 1991 |
| MscI | TGGCCA | 2 cut(s) | 816, 944 |
| MslI | CAYNNNNRTG | 5 cut(s) | 911, 1915, 2068, 2571, 2829 |
| Msp20I | TGGCCA | 2 cut(s) | 816, 944 |
| MspA1I | CMGCKG | 2 cut(s) | 866, 1870 |
| MspCI | CTTAAG | 2 cut(s) | 754, 1514 |
| MunI | CAATTG | 1 cut(s) | 2633 |
| MvnI | CGCG | 1 cut(s) | 1216 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 326, 374, 383, 1437, 1502, 1876, 2193, 2663 |
| NaeI | GCCGGC | 1 cut(s) | 1596 |
| NciI | CCSGG | 3 cut(s) | 606, 2355, 2397 |
| NcoI | CCATGG | 1 cut(s) | 1925 |
| NdeI | CATATG | 1 cut(s) | 1038 |
| NgoMIV | GCCGGC | 1 cut(s) | 1594 |
| NlaIV | GGNNCC | 7 cut(s) | 493, 494, 1271, 1272, 1284, 1588, 2400 |
| NmeAIII | GCCGAG | 1 cut(s) | 348 |
| NmuCI | GTSAC | 3 cut(s) | 56, 95, 2517 |
| NsiI | ATGCAT | 2 cut(s) | 1086, 2036 |
| NspI | RCATGY | 2 cut(s) | 1088, 1906 |
| NspV | TTCGAA | 1 cut(s) | 141 |
| OliI | CACNNNNGTG | 1 cut(s) | 2571 |
| PaeR7I | CTCGAG | 1 cut(s) | 2434 |
| PaqCI | CACCTGC | 1 cut(s) | 223 |
| PasI | CCCWGGG | 1 cut(s) | 776 |
| PciSI | GCTCTTC | 1 cut(s) | 528 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 646 |
| PdiI | GCCGGC | 1 cut(s) | 1596 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1920, 1991 |
| PfeI | GAWTC | 8 cut(s) | 292, 337, 470, 593, 1130, 1519, 1873, 2009 |
| Pfl23II | CGTACG | 1 cut(s) | 222 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 1582, 2513, 2700 |
| PfoI | TCCNGGA | 1 cut(s) | 604 |
| PleI | GAGTC | 2 cut(s) | 2384, 2426 |
| PpsI | GAGTC | 2 cut(s) | 2384, 2426 |
| Ppu21I | YACGTR | 2 cut(s) | 222, 1843 |
| PpuMI | RGGWCCY | 2 cut(s) | 492, 1270 |
| PshBI | ATTAAT | 1 cut(s) | 2321 |
| Psp1406I | AACGTT | 1 cut(s) | 2477 |
| Psp5II | RGGWCCY | 2 cut(s) | 492, 1270 |
| PspEI | GGTNACC | 1 cut(s) | 95 |
| PspFI | CCCAGC | 1 cut(s) | 1431 |
| PspLI | CGTACG | 1 cut(s) | 222 |
| PspN4I | GGNNCC | 7 cut(s) | 493, 494, 1271, 1272, 1284, 1588, 2400 |
| PspPI | GGNCC | 7 cut(s) | 430, 492, 1270, 1864, 2240, 2399, 2489 |
| PspPPI | RGGWCCY | 2 cut(s) | 492, 1270 |
| PspXI | VCTCGAGB | 1 cut(s) | 2434 |
| PstI | CTGCAG | 1 cut(s) | 1881 |
| PstNI | CAGNNNCTG | 5 cut(s) | 386, 866, 901, 1133, 2657 |
| PsuI | RGATCY | 4 cut(s) | 952, 1259, 1510, 2130 |
| PvuII | CAGCTG | 1 cut(s) | 866 |
| RseI | CAYNNNNRTG | 5 cut(s) | 911, 1915, 2068, 2571, 2829 |
| SapI | GCTCTTC | 1 cut(s) | 528 |
| Sau96I | GGNCC | 7 cut(s) | 430, 492, 1270, 1864, 2240, 2399, 2489 |
| ScaI | AGTACT | 1 cut(s) | 1883 |
| SchI | GAGTC | 2 cut(s) | 2385, 2426 |
| SduI | GDGCHC | 2 cut(s) | 1560, 2395 |
| SfaNI | GCATC | 3 cut(s) | 691, 1071, 1815 |
| SfcI | CTRYAG | 5 cut(s) | 19, 306, 1877, 2232, 2743 |
| Sfr274I | CTCGAG | 1 cut(s) | 2434 |
| SfuI | TTCGAA | 1 cut(s) | 141 |
| SinI | GGWCC | 4 cut(s) | 492, 1270, 2399, 2489 |
| SlaI | CTCGAG | 1 cut(s) | 2434 |
| SmiI | ATTTAAAT | 1 cut(s) | 238 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 911, 1915, 2068, 2571, 2829 |
| SmlI | CTYRAG | 3 cut(s) | 754, 1514, 2434 |
| SmoI | CTYRAG | 3 cut(s) | 754, 1514, 2434 |
| SnaBI | TACGTA | 1 cut(s) | 1843 |
| SsiI | CCGC | 6 cut(s) | 444, 1216, 1851, 1870, 2216, 2309 |
| SspI | AATATT | 1 cut(s) | 1200 |
| SspMI | CTAG | 5 cut(s) | 543, 1148, 1263, 1947, 2001 |
| StyI | CCWWGG | 3 cut(s) | 1453, 1925, 1951 |
| SwaI | ATTTAAAT | 1 cut(s) | 238 |
| TaaI | ACNGT | 7 cut(s) | 513, 1227, 1798, 1820, 1964, 2573, 2765 |
| TaiI | ACGT | 7 cut(s) | 63, 224, 358, 652, 1845, 2141, 2480 |
| TaqI | TCGA | 7 cut(s) | 141, 162, 352, 1057, 2435, 2606, 2827 |
| TaqII | GACCGA | 1 cut(s) | 51 |
| TatI | WGTACW | 2 cut(s) | 252, 1881 |
| TauI | GCSGC | 2 cut(s) | 2218, 2312 |
| TfiI | GAWTC | 8 cut(s) | 292, 337, 470, 593, 1130, 1519, 1873, 2009 |
| TscAI | CASTG | 4 cut(s) | 1053, 1825, 1866, 2770 |
| TseFI | GTSAC | 3 cut(s) | 56, 95, 2517 |
| Tsp45I | GTSAC | 3 cut(s) | 56, 95, 2517 |
| TspGWI | ACGGA | 2 cut(s) | 2349, 2391 |
| TspRI | CASTG | 4 cut(s) | 1053, 1825, 1866, 2770 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 1582, 2513, 2700 |
| Vha464I | CTTAAG | 2 cut(s) | 754, 1514 |
| VpaK11BI | GGWCC | 4 cut(s) | 492, 1270, 2399, 2489 |
| VspI | ATTAAT | 1 cut(s) | 2321 |
| XapI | RAATTY | 6 cut(s) | 143, 1053, 1355, 1667, 1942, 2668 |
| XbaI | TCTAGA | 1 cut(s) | 1262 |
| XceI | RCATGY | 2 cut(s) | 1088, 1906 |
| XhoI | CTCGAG | 1 cut(s) | 2434 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1920, 1991 |
| XspI | CTAG | 5 cut(s) | 543, 1148, 1263, 1947, 2001 |
| ZraI | GACGTC | 2 cut(s) | 61, 2139 |
| ZrmI | AGTACT | 1 cut(s) | 1883 |
| Zsp2I | ATGCAT | 2 cut(s) | 1086, 2036 |