Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000164

Orthogroup ID

OG0007016

Physical Location & Seq

Genomic Coordinates Forward (+)

549 .. 5641

Gene Structure 5093 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_164G00435930.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1713 bp

ATGATTATATTTCAGGCTTTTGAGAATAATGAAGAGAGACAGAGAAATAGAAGAGAGGCTTGTGAAGAGCTACCGGCTCCAGTGGTAGAAAAGGTGGTGGACAAGGTTAAATTGGGGGAGCCGGGATATACAGAAAGGTATTATGCTGAGAAGTTTCAAGTATCAAAGCCAGAGGAGATTGAAAAAGTTAAAAAAGACTTGGTTCTAAAATATGTAGAAGGCTTATGCTGGGTCTGCCGATATTACTACCAAGGGGTTTGGTCATGGCAATGGTATTATCCATACCATTATGCTCCTTTTGCTTCTGATCTAAAAGATCTAGATGAGTTGGAAATAACATTTTTTTTGGGAGAGCCATTTAAACCCTTTGATCAGCTCATGGGAACCTTACCAGCTGCAAGTTGTAGTGCTCTTCCAGAAAAATACAGAAATTTGATGACTGATCCGTCATCTCCCATTTGTCATTTCTACCCATCTGATTTTGAGATTGACATGAATGGCAAGCGCTTTGCATGGCAGGGCATTGCCAAATTGCCATTCATTGATGAGAAGAAATTGCTTGCTCAGACAAGGAAGCTTGAAAGCACTTTAACGGAGGAAGAGAAAGCTCGAAATAGCGTGATGCTTGATTTGCTTTATGTCTATCCTTCTCATCCTCTGGCGTCGGAGATTATTTTCTACTACCATTTATGTTATCTGTGTCCCCCACATGAAAGATTGCCACATGCGATAAATACTAATCTTAGTGGTGGAATGAATGGATTCCTTTGGTTATCTGAGAGGAATGGCTTTAGAAACGTAATCCCTTCCCCTGTGCATGGTTTTCCCAACATAGACTATAACGAAGTCTTAAATGTTACATATCTTAGCCCTGCAGCTCAAAAACACATCCCAGAACCTCCCGAGGGTGTGATCATGCCCAGAAAGGTTGTAAAACCTACGGATATCAAACCTCCCCCTGCATTATGGCATGAAGACAATGGTCCCCGACGCTACCAAAACAGAGATAGGCCACAAATACCTGGAGCAATTGCTGGAACTGTGTTGGGAGAAGCAGCTCATCGACTTGTCAAGAACACACTAAATCTTAGACCTAGTAATCCATCCTCTGGATTTTGGGATCAATCACAGCCTTTAAGAGCTTCTTCTGGAAACTACAATGGAAACTATCCAGTCAACAGACCAAGACCAGCTGGGCCATCTGGGTATGAAAGGGGTTTCCGTGAAGAACCAAATTATGGAAATTCTTTTAATCCTCAGGGCATCATGGCTAGGCCCAGAGCTCCTTACTCAAATGGTGTGCAGGGTGACAGACAGAGTTTTAGGACACAAGAAAGAACACAGTATCAAGAGCAGGGTTTTAGAGGACAAGAAAGAATACAATATCAAGAACAGTACCGCAACATGAGAACTGGGATGTCTGGTTTAACAATGGAAGTAAGTGTGAGAACCAGGTCTCCTGTAGTGGCGCAACCAGGGATGCCAAATTCAGGATACTCCACAAACCCACATCAGCAGTTTGTGCAGAACATGGGCGCTCTTCCAGCGCCACCTACAAAGTGGATCAACAAAGAATCGAGTGCCAATGGTGGGATTTATGGTAGGCATCAGGAAACCGGATATGGCGGACCATATGAGCAGCAGGTGAAAAAGGTTTATCAGGTAAAGACACGTCCTCCTCAGGACTTGTCAAACTCTGGAAACCAGGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000291 GO:0000902 GO:0000932 GO:0000956 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0004518 GO:0004527 GO:0004532 GO:0004534 GO:0004540 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005844 GO:0006139 GO:0006401 GO:0006402 GO:0006725 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0008409 GO:0009056 GO:0009057 GO:0009266 GO:0009408 GO:0009628 GO:0009653 GO:0009826 GO:0009888 GO:0009892 GO:0009987 GO:0010087 GO:0010286 GO:0010468 GO:0010494 GO:0010586 GO:0010587 GO:0010605 GO:0010629 GO:0016043 GO:0016049 GO:0016070 GO:0016071 GO:0016787 GO:0016788 GO:0016796 GO:0016896 GO:0019222 GO:0019439 GO:0031086 GO:0031087 GO:0032502 GO:0032989 GO:0032991 GO:0033554 GO:0034605 GO:0034641 GO:0034655 GO:0034660 GO:0034661 GO:0035770 GO:0036464 GO:0040007 GO:0040029 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046700 GO:0048519 GO:0048589 GO:0048856 GO:0048869 GO:0050789 GO:0050896 GO:0051301 GO:0051716 GO:0060255 GO:0060560 GO:0065007 GO:0070370 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0090501 GO:0090503 GO:0097159 GO:0140098 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03008 ko03018 ko04016 map03008 map03018 map04016

Pfam Domains

Protein Families

XRN_N zf-CCHC

Protein Analysis

570

Amino Acids

65.29

Weight (kDa)

8.42

Isoelectric Point (pI)

53.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
XRN_M	PF17846	26 - 316	3.2e-116	Xrn1 helical domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0007016)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G54490 AT1G54490
fragaria_vesca	FvH4_6g03690 FvH4_6g03690
malus_domestica	MD04G1219200.v1.1 MD12G1236200.v1.1
prunus_persica	Prupe.6G338500_v2.0.a1 Prupe.6G338500_v2.0.a1
pyrus_communis	pycom04g19450 pycom12g21730
rosa_chinensis	RchiOBHm_Chr3g0452231
rosa_laevigata	RLG00000025615
rosa_multiflora	Rmu_sc0037132.1_g000001 Rmu_sc0041263.1_g000001
rosa_roxburghii	Rroxscaffold_164G00435930 Rroxscaffold_6G00429350
rosa_rugosa	Rorug02G0639400
rosa_samantha	Rh3AG041300 Rh3BG043000 Rh3BG043200 Rh3CG041400 Rh3CG041600 Rh3DG042300 Rh3DG042500
rosa_wichuraiana	Rw3G003160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1633
AasI	GACNNNNNNGTC	1 cut(s)	445
Acc36I	ACCTGC	1 cut(s)	1633
AccB7I	CCANNNNNTGG	2 cut(s)	1109, 1238
AciI	CCGC	2 cut(s)	1399, 1626
AclWI	GGATC	3 cut(s)	437, 1128, 1571
AcsI	RAATTY	3 cut(s)	430, 1243, 1486
AcyI	GRCGYC	1 cut(s)	662
AfaI	GTAC	1 cut(s)	1397
AfeI	AGCGCT	1 cut(s)	506
AfiI	CCNNNNNNNGG	6 cut(s)	818, 905, 1109, 1238, 1490, 1590
AflIII	ACRYGT	1 cut(s)	1670
AgsI	TTSAA	3 cut(s)	158, 182, 581
AjiI	CACGTC	1 cut(s)	1673
AjnI	CCWGG	4 cut(s)	1021, 1451, 1474, 1704
AjuI	GAANNNNNNNTTGG	2 cut(s)	521, 553
AloI	GAACNNNNNNTCC	2 cut(s)	1441, 1473
Alw21I	GWGCWC	2 cut(s)	412, 1285
Alw26I	GTCTC	2 cut(s)	31, 1461
AlwI	GGATC	3 cut(s)	437, 1128, 1571
Ama87I	CYCGRG	1 cut(s)	902
Aor51HI	AGCGCT	1 cut(s)	506
AoxI	GGCC	3 cut(s)	1010, 1196, 1274
ApeKI	GCWGC	4 cut(s)	395, 875, 1055, 1639
ApoI	RAATTY	3 cut(s)	430, 1243, 1486
Asp700I	GAANNNNTTC	1 cut(s)	761
AspLEI	GCGC	4 cut(s)	507, 1471, 1538, 1549
AspS9I	GGNCC	4 cut(s)	983, 1196, 1275, 1628
AsuC2I	CCSGG	1 cut(s)	123
AsuHPI	GGTGA	2 cut(s)	1319, 1657
AvaI	CYCGRG	1 cut(s)	902
AvaII	GGWCC	2 cut(s)	983, 1628
AxyI	CCTNAGG	2 cut(s)	1257, 1680
BanII	GRGCYC	1 cut(s)	1285
BbsI	GAAGAC	1 cut(s)	981
Bbv12I	GWGCWC	2 cut(s)	412, 1285
BbvI	GCAGC	4 cut(s)	382, 887, 1067, 1651
BccI	CCATC	3 cut(s)	481, 1111, 1207
BciT130I	CCWGG	4 cut(s)	1023, 1453, 1476, 1706
BciVI	GTATCC	1 cut(s)	1487
BclI	TGATCA	2 cut(s)	370, 912
BcnI	CCSGG	1 cut(s)	123
BcoDI	GTCTC	2 cut(s)	31, 1461
BfaI	CTAG	3 cut(s)	320, 1095, 1272
BfmI	CTRYAG	2 cut(s)	873, 1461
BfoI	RGCGCY	3 cut(s)	508, 1539, 1550
BfuAI	ACCTGC	1 cut(s)	1633
BfuI	GTATCC	1 cut(s)	1487
BglII	AGATCT	1 cut(s)	316
BisI	GCNGC	4 cut(s)	396, 876, 1056, 1640
BlsI	GCNGC	4 cut(s)	397, 877, 1057, 1641
Bme1390I	CCNGG	5 cut(s)	123, 1023, 1453, 1476, 1706
Bme18I	GGWCC	2 cut(s)	983, 1628
BmeT110I	CYCGRG	1 cut(s)	902
BmgBI	CACGTC	1 cut(s)	1673
BmgT120I	GGNCC	4 cut(s)	983, 1196, 1275, 1628
BmiI	GGNNCC	4 cut(s)	78, 120, 385, 985
BmrFI	CCNGG	5 cut(s)	123, 1023, 1453, 1476, 1706
BmrI	ACTGGG	1 cut(s)	1422
BmsI	GCATC	4 cut(s)	612, 1272, 1470, 1615
BmuI	ACTGGG	1 cut(s)	1422
BoxI	GACNNNNGTC	1 cut(s)	981
BpiI	GAAGAC	1 cut(s)	981
BpmI	CTGGAG	2 cut(s)	63, 1044
BpuMI	CCSGG	1 cut(s)	123
BsaHI	GRCGYC	1 cut(s)	662
BsaI	GGTCTC	1 cut(s)	1461
BsaJI	CCNNGG	3 cut(s)	250, 903, 1475
BsaWI	WCCGGW	1 cut(s)	1616
BsaXI	ACNNNNNCTCC	4 cut(s)	1441, 1471, 1660, 1690
Bsc4I	CCNNNNNNNGG	6 cut(s)	818, 905, 1109, 1238, 1490, 1590
Bse118I	RCCGGY	1 cut(s)	73
Bse1I	ACTGG	3 cut(s)	80, 1172, 1417
Bse21I	CCTNAGG	2 cut(s)	1257, 1680
Bse3DI	GCAATG	2 cut(s)	275, 522
BseBI	CCWGG	4 cut(s)	1023, 1453, 1476, 1706
BseDI	CCNNGG	3 cut(s)	250, 903, 1475
BseGI	GGATG	5 cut(s)	652, 888, 1103, 1422, 1485
BseLI	CCNNNNNNNGG	6 cut(s)	818, 905, 1109, 1238, 1490, 1590
BseMI	GCAATG	2 cut(s)	275, 522
BseMII	CTCAG	5 cut(s)	138, 578, 768, 1271, 1694
BseNI	ACTGG	3 cut(s)	80, 1172, 1417
BseRI	GAGGAG	2 cut(s)	188, 1668
BseXI	GCAGC	4 cut(s)	382, 887, 1067, 1651
BseYI	CCCAGC	2 cut(s)	228, 1193
BsgI	GTGCAG	2 cut(s)	1322, 1544
BshFI	GGCC	3 cut(s)	1012, 1198, 1276
BsiHKAI	GWGCWC	2 cut(s)	412, 1285
BsiHKCI	CYCGRG	1 cut(s)	902
BsiSI	CCGG	3 cut(s)	74, 122, 1617
BslFI	GGGAC	2 cut(s)	687, 969
BslI	CCNNNNNNNGG	6 cut(s)	818, 905, 1109, 1238, 1490, 1590
BsmAI	GTCTC	2 cut(s)	31, 1461
BsmFI	GGGAC	2 cut(s)	687, 969
BsnI	GGCC	3 cut(s)	1012, 1198, 1276
Bso31I	GGTCTC	1 cut(s)	1461
BsoBI	CYCGRG	1 cut(s)	902
Bsp1286I	GDGCHC	2 cut(s)	412, 1285
Bsp143I	GATC	7 cut(s)	307, 316, 370, 442, 912, 1120, 1563
BspACI	CCGC	2 cut(s)	1399, 1626
BspANI	GGCC	3 cut(s)	1012, 1198, 1276
BspCNI	CTCAG	5 cut(s)	139, 577, 769, 1270, 1693
BspLI	GGNNCC	4 cut(s)	78, 120, 385, 985
BspMAI	CTGCAG	1 cut(s)	877
BspMI	ACCTGC	1 cut(s)	1633
BspPI	GGATC	3 cut(s)	437, 1128, 1571
BspQI	GCTCTTC	3 cut(s)	60, 417, 1545
BspTNI	GGTCTC	1 cut(s)	1461
BsrDI	GCAATG	2 cut(s)	275, 522
BsrFI	RCCGGY	1 cut(s)	73
BsrI	ACTGG	3 cut(s)	80, 1172, 1417
BssAI	RCCGGY	1 cut(s)	73
BssECI	CCNNGG	3 cut(s)	250, 903, 1475
BssMI	GATC	7 cut(s)	307, 316, 370, 442, 912, 1120, 1563
BssNI	GRCGYC	1 cut(s)	662
BssT1I	CCWWGG	1 cut(s)	250
Bst2UI	CCWGG	4 cut(s)	1023, 1453, 1476, 1706
Bst4CI	ACNGT	3 cut(s)	1042, 1344, 1395
Bst6I	CTCTTC	6 cut(s)	27, 46, 60, 417, 594, 1545
BstACI	GRCGYC	1 cut(s)	662
BstAPI	GCANNNNNTGC	1 cut(s)	1522
BstC8I	GCNNGC	2 cut(s)	503, 561
BstDEI	CTNAG	8 cut(s)	147, 564, 743, 777, 866, 1088, 1257, 1680
BstF5I	GGATG	5 cut(s)	652, 888, 1103, 1422, 1485
BstH2I	RGCGCY	3 cut(s)	508, 1539, 1550
BstHHI	GCGC	4 cut(s)	507, 1471, 1538, 1549
BstKTI	GATC	7 cut(s)	310, 319, 373, 445, 915, 1123, 1566
BstMAI	GTCTC	2 cut(s)	31, 1461
BstMBI	GATC	7 cut(s)	307, 316, 370, 442, 912, 1120, 1563
BstMWI	GCNNNNNNNGC	5 cut(s)	234, 299, 631, 1522, 1544
BstNI	CCWGG	4 cut(s)	1023, 1453, 1476, 1706
BstNSI	RCATGY	1 cut(s)	728
BstPAI	GACNNNNGTC	1 cut(s)	981
BstSCI	CCNGG	5 cut(s)	121, 1021, 1451, 1474, 1704
BstSFI	CTRYAG	2 cut(s)	873, 1461
BstV1I	GCAGC	4 cut(s)	382, 887, 1067, 1651
BstV2I	GAAGAC	1 cut(s)	981
BstX2I	RGATCY	1 cut(s)	316
BstYI	RGATCY	1 cut(s)	316
Bsu36I	CCTNAGG	2 cut(s)	1257, 1680
BsuI	GTATCC	1 cut(s)	1487
BsuRI	GGCC	3 cut(s)	1012, 1198, 1276
BtrI	CACGTC	1 cut(s)	1673
BtsCI	GGATG	5 cut(s)	652, 888, 1103, 1422, 1485
BtsIMutI	CAGTG	1 cut(s)	87
BveI	ACCTGC	1 cut(s)	1633
Cac8I	GCNNGC	2 cut(s)	503, 561
CfoI	GCGC	4 cut(s)	507, 1471, 1538, 1549
Cfr10I	RCCGGY	1 cut(s)	73
Cfr13I	GGNCC	4 cut(s)	983, 1196, 1275, 1628
CseI	GACGC	2 cut(s)	651, 999
CsiI	ACCWGGT	1 cut(s)	1451
Csp6I	GTAC	1 cut(s)	1396
CviQI	GTAC	1 cut(s)	1396
DdeI	CTNAG	8 cut(s)	147, 564, 743, 777, 866, 1088, 1257, 1680
DpnI	GATC	7 cut(s)	309, 318, 372, 444, 914, 1122, 1565
DpnII	GATC	7 cut(s)	307, 316, 370, 442, 912, 1120, 1563
DraI	TTTAAA	1 cut(s)	361
DrdI	GACNNNNNNGTC	1 cut(s)	445
DseDI	GACNNNNNNGTC	1 cut(s)	445
Eam1104I	CTCTTC	6 cut(s)	27, 46, 60, 417, 594, 1545
EarI	CTCTTC	6 cut(s)	27, 46, 60, 417, 594, 1545
EciI	GGCGGA	1 cut(s)	1641
Ecl136II	GAGCTC	1 cut(s)	1283
Eco130I	CCWWGG	1 cut(s)	250
Eco24I	GRGCYC	1 cut(s)	1285
Eco31I	GGTCTC	1 cut(s)	1461
Eco32I	GATATC	1 cut(s)	946
Eco47I	GGWCC	2 cut(s)	983, 1628
Eco47III	AGCGCT	1 cut(s)	506
Eco53kI	GAGCTC	1 cut(s)	1283
Eco81I	CCTNAGG	2 cut(s)	1257, 1680
Eco88I	CYCGRG	1 cut(s)	902
EcoICRI	GAGCTC	1 cut(s)	1283
EcoRII	CCWGG	4 cut(s)	1021, 1451, 1474, 1704
EcoRV	GATATC	1 cut(s)	946
EcoT14I	CCWWGG	1 cut(s)	250
EcoT38I	GRGCYC	1 cut(s)	1285
ErhI	CCWWGG	1 cut(s)	250
FalI	AAGNNNNNCTT	4 cut(s)	43, 75, 1129, 1161
FaqI	GGGAC	2 cut(s)	687, 969
FauNDI	CATATG	1 cut(s)	1633
FbaI	TGATCA	2 cut(s)	370, 912
Fnu4HI	GCNGC	4 cut(s)	396, 876, 1056, 1640
FokI	GGATG	5 cut(s)	639, 875, 1090, 1429, 1492
FriOI	GRGCYC	1 cut(s)	1285
Fsp4HI	GCNGC	4 cut(s)	396, 876, 1056, 1640
FspBI	CTAG	3 cut(s)	320, 1095, 1272
GlaI	GCGC	4 cut(s)	506, 1470, 1537, 1548
GluI	GCNGC	4 cut(s)	396, 876, 1056, 1640
GsaI	CCCAGC	2 cut(s)	232, 1197
GsuI	CTGGAG	2 cut(s)	63, 1044
HaeII	RGCGCY	3 cut(s)	508, 1539, 1550
HaeIII	GGCC	3 cut(s)	1012, 1198, 1276
HapII	CCGG	3 cut(s)	74, 122, 1617
HgaI	GACGC	2 cut(s)	651, 999
HhaI	GCGC	4 cut(s)	507, 1471, 1538, 1549
Hin1I	GRCGYC	1 cut(s)	662
Hin6I	GCGC	4 cut(s)	505, 1469, 1536, 1547
HinP1I	GCGC	4 cut(s)	505, 1469, 1536, 1547
HincII	GTYRAC	1 cut(s)	1177
HindII	GTYRAC	1 cut(s)	1177
HindIII	AAGCTT	1 cut(s)	575
HinfI	GANTC	2 cut(s)	762, 1574
HpaII	CCGG	3 cut(s)	74, 122, 1617
HphI	GGTGA	2 cut(s)	1319, 1657
Hpy166II	GTNNAC	2 cut(s)	100, 1177
Hpy188I	TCNGA	5 cut(s)	307, 478, 567, 667, 778
Hpy8I	GTNNAC	2 cut(s)	100, 1177
Hpy99I	CGWCG	2 cut(s)	667, 993
HpyAV	CCTTC	3 cut(s)	212, 657, 816
HpyCH4III	ACNGT	3 cut(s)	1042, 1344, 1395
HpyCH4IV	ACGT	2 cut(s)	798, 1672
HpyCH4V	TGCA	7 cut(s)	398, 512, 817, 875, 962, 1303, 1525
HpyF10VI	GCNNNNNNNGC	5 cut(s)	234, 299, 631, 1522, 1544
HpyF3I	CTNAG	8 cut(s)	147, 564, 743, 777, 866, 1088, 1257, 1680
HpySE526I	ACGT	2 cut(s)	798, 1672
Hsp92I	GRCGYC	1 cut(s)	662
HspAI	GCGC	4 cut(s)	505, 1469, 1536, 1547
Ksp22I	TGATCA	2 cut(s)	370, 912
Kzo9I	GATC	7 cut(s)	307, 316, 370, 442, 912, 1120, 1563
LguI	GCTCTTC	3 cut(s)	60, 417, 1545
LmnI	GCTCC	5 cut(s)	82, 118, 298, 1025, 1288
Lsp1109I	GCAGC	4 cut(s)	382, 887, 1067, 1651
LweI	GCATC	4 cut(s)	612, 1272, 1470, 1615
MabI	ACCWGGT	1 cut(s)	1451
MaeI	CTAG	3 cut(s)	320, 1095, 1272
MaeII	ACGT	2 cut(s)	798, 1672
MaeIII	GTNAC	2 cut(s)	856, 1307
MalI	GATC	7 cut(s)	309, 318, 372, 444, 914, 1122, 1565
MboI	GATC	7 cut(s)	307, 316, 370, 442, 912, 1120, 1563
MfeI	CAATTG	1 cut(s)	1029
MflI	RGATCY	1 cut(s)	316
MhlI	GDGCHC	2 cut(s)	412, 1285
MluCI	AATT	8 cut(s)	110, 430, 530, 554, 1029, 1234, 1243, 1486
MmeI	TCCRAC	2 cut(s)	309, 645
MroXI	GAANNNNTTC	1 cut(s)	761
MseI	TTAA	8 cut(s)	108, 189, 360, 590, 851, 1136, 1251, 1427
MslI	CAYNNNNRTG	1 cut(s)	268
MspA1I	CMGCKG	2 cut(s)	395, 1193
MspI	CCGG	3 cut(s)	74, 122, 1617
MspR9I	CCNGG	5 cut(s)	123, 1023, 1453, 1476, 1706
MunI	CAATTG	1 cut(s)	1029
MvaI	CCWGG	4 cut(s)	1023, 1453, 1476, 1706
MwoI	GCNNNNNNNGC	5 cut(s)	234, 299, 631, 1522, 1544
NciI	CCSGG	1 cut(s)	123
NdeI	CATATG	1 cut(s)	1633
NdeII	GATC	7 cut(s)	307, 316, 370, 442, 912, 1120, 1563
NlaIV	GGNNCC	4 cut(s)	78, 120, 385, 985
NmuCI	GTSAC	1 cut(s)	1307
NspI	RCATGY	1 cut(s)	728
PaqCI	CACCTGC	1 cut(s)	1633
PciSI	GCTCTTC	3 cut(s)	60, 417, 1545
PdmI	GAANNNNTTC	1 cut(s)	761
PfeI	GAWTC	2 cut(s)	762, 1574
PflMI	CCANNNNNTGG	2 cut(s)	1109, 1238
PkrI	GCNGC	4 cut(s)	397, 877, 1057, 1641
PshAI	GACNNNNGTC	1 cut(s)	981
Psp124BI	GAGCTC	1 cut(s)	1285
Psp6I	CCWGG	4 cut(s)	1021, 1451, 1474, 1704
PspFI	CCCAGC	2 cut(s)	228, 1193
PspGI	CCWGG	4 cut(s)	1021, 1451, 1474, 1704
PspN4I	GGNNCC	4 cut(s)	78, 120, 385, 985
PspPI	GGNCC	4 cut(s)	983, 1196, 1275, 1628
PstI	CTGCAG	1 cut(s)	877
PsuI	RGATCY	1 cut(s)	316
PvuII	CAGCTG	2 cut(s)	395, 1193
RsaI	GTAC	1 cut(s)	1397
RsaNI	GTAC	1 cut(s)	1396
RseI	CAYNNNNRTG	1 cut(s)	268
SacI	GAGCTC	1 cut(s)	1285
SapI	GCTCTTC	3 cut(s)	60, 417, 1545
SaqAI	TTAA	8 cut(s)	108, 189, 360, 590, 851, 1136, 1251, 1427
SatI	GCNGC	4 cut(s)	396, 876, 1056, 1640
Sau3AI	GATC	7 cut(s)	307, 316, 370, 442, 912, 1120, 1563
Sau96I	GGNCC	4 cut(s)	983, 1196, 1275, 1628
ScrFI	CCNGG	5 cut(s)	123, 1023, 1453, 1476, 1706
SduI	GDGCHC	2 cut(s)	412, 1285
SexAI	ACCWGGT	1 cut(s)	1451
SfaNI	GCATC	4 cut(s)	612, 1272, 1470, 1615
SfcI	CTRYAG	2 cut(s)	873, 1461
SinI	GGWCC	2 cut(s)	983, 1628
SmiMI	CAYNNNNRTG	1 cut(s)	268
Sse9I	AATT	8 cut(s)	110, 430, 530, 554, 1029, 1234, 1243, 1486
SsiI	CCGC	2 cut(s)	1399, 1626
SspMI	CTAG	3 cut(s)	320, 1095, 1272
SstI	GAGCTC	1 cut(s)	1285
StyD4I	CCNGG	5 cut(s)	121, 1021, 1451, 1474, 1704
StyI	CCWWGG	1 cut(s)	250
TaaI	ACNGT	3 cut(s)	1042, 1344, 1395
TaiI	ACGT	2 cut(s)	801, 1675
TaqI	TCGA	3 cut(s)	610, 1063, 1577
TasI	AATT	8 cut(s)	110, 430, 530, 554, 1029, 1234, 1243, 1486
TfiI	GAWTC	2 cut(s)	762, 1574
Tru1I	TTAA	8 cut(s)	108, 189, 360, 590, 851, 1136, 1251, 1427
Tru9I	TTAA	8 cut(s)	108, 189, 360, 590, 851, 1136, 1251, 1427
TscAI	CASTG	1 cut(s)	87
TseFI	GTSAC	1 cut(s)	1307
TseI	GCWGC	4 cut(s)	395, 875, 1055, 1639
Tsp45I	GTSAC	1 cut(s)	1307
TspDTI	ATGAA	7 cut(s)	45, 509, 529, 726, 770, 987, 1224
TspGWI	ACGGA	4 cut(s)	435, 608, 956, 1211
TspRI	CASTG	1 cut(s)	87
Van91I	CCANNNNNTGG	2 cut(s)	1109, 1238
VpaK11BI	GGWCC	2 cut(s)	983, 1628
XapI	RAATTY	3 cut(s)	430, 1243, 1486
XbaI	TCTAGA	1 cut(s)	319
XceI	RCATGY	1 cut(s)	728
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1557
XmnI	GAANNNNTTC	1 cut(s)	761
XspI	CTAG	3 cut(s)	320, 1095, 1272

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.