Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0007016

Physical Location & Seq

Genomic Coordinates Forward (+)

75203210 .. 75206716

Gene Structure 3507 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0639400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1662 bp

ATGGCTCTCTCTCTAAGCTTTTCGTTGCCAACGTCGGCCACAAGAGCGCCGGTGAGCTCCTTCAGGAGACTACCGAGCCGTATTCCAACGGTGAAAGCCGTAGGAGTGTTCCCATCTAGGAGAATTGATCATAAGAGGGCCATCAGAATTAGACCATGCTCGGCATTGGGAGATTCAGTAGTAACAAGTGCAGTTACTGACACTGTGGCCGCGGTTGCTGATACCACAACGACAACCACAACCACAGAAGTAACCAGGGATGATTTCCCTACTGATTTCAAGTTTGGTTGCGCCACTTCTGCTTTCCAGACAGAAGGATCTGGAACTGAAGGAGGGAGAGGACCCGCCACGTGGGATAGTTACATACAAGATGACACAGTTGATGGCACAGAAATAGCCGTTGATTCCTACAACCGCTACAAGGACGACGTGCAACTGCTGAAAGATATGGGAGTGGATACATACCGATTCTCCATGTCTTGGTCAAGAATCCTGCCTGACGGAACCATAGACGGTGGAATAAACCAGGAGGGTATCGATTTTTACAACAACTTCATCGACGAACTGATCGCAAATGGGATAACTCCATTTGTGACACTGTTCCACTTCGACTTGCCCACAGCACTGGACACCAAGTACAGCGGTTTCTTAAGCAGTGACATTGTGGAGGATTTCAAAGCATATGCGGATTTATGTTTCAAAACTTTTGGCGATCGAGTGAAGTACTGGGCTACTATCAATGAGCCACAAGTGTGGGGGCAATACGGCTTCACTAACACCGCCGCAGATGCAAACGCTGCCACCGATCCTTATAAATCTTCGCATAATGTCATATTAGCCCATGCTACAGCAGCCAAACTCTACAAGAATACATACCAGCCAACACAAGGAGGAGAGATTGGAATTCCGATGGTGGTTGAATGGTTTGAGCCATACCAAGACACCCCGCAAGATACATTTGCAGCCAAAAGAGCATTCGATTTTTTGACAGGATGGTTTCTGGAGCCCATAATATATGGTGATTACCCATTTGTTATGAAAGCTTTAGTGAGGGATGGCCTACCAGAATTCACAGATGAGCAGAAAGAGTTGGTAAAGGGCTCATATGATTACATTGGGGTGAACTACTACACCTCCAGATACGCCGCTGCAGTACCAATAACAAGCAACGATGTCTACACCACTATGGATCAGTTCCAGCATGCTACCATCACAGTGGACGGATCAGATGGGGAGCCCATAGGCGCTGCAACACCAGGGAGCTCTGAGATCTACGTGTATCCAGAAGGGCTGAGAAAGGCATTGATTTTGCTGAAGCAATACAACAATCCCAAAATCTACATTACTGAGAATGGATATCCGGAAGCACGAGATGACACCCTTTCAGTAGAAGAGGCTTCGATTGACGATGTTCGAATTCAGCACATCAAGGATCATCTCGCCGCTGTCAAAGATGCCAGAGCTGCTGGAACAGATGTGCAGGGTTACCTGATGTGGGCACTGATGGACTGCCTGGAGATGGGATCCCTATACGCAGTTCGATACGGTCTCAACTACACTGATTATCTCAATGACTTGGCCAGAACTCCAAAGAAGTCCGCCGCCTGGCTCAAAGATTTCTTGGCTTCAACCACTACAACCACTACAACCACTTCAACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000291 GO:0000902 GO:0000932 GO:0000956 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0004518 GO:0004527 GO:0004532 GO:0004534 GO:0004540 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005844 GO:0006139 GO:0006401 GO:0006402 GO:0006725 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0008409 GO:0009056 GO:0009057 GO:0009266 GO:0009408 GO:0009628 GO:0009653 GO:0009826 GO:0009888 GO:0009892 GO:0009987 GO:0010087 GO:0010286 GO:0010468 GO:0010494 GO:0010586 GO:0010587 GO:0010605 GO:0010629 GO:0016043 GO:0016049 GO:0016070 GO:0016071 GO:0016787 GO:0016788 GO:0016796 GO:0016896 GO:0019222 GO:0019439 GO:0031086 GO:0031087 GO:0032502 GO:0032989 GO:0032991 GO:0033554 GO:0034605 GO:0034641 GO:0034655 GO:0034660 GO:0034661 GO:0035770 GO:0036464 GO:0040007 GO:0040029 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046700 GO:0048519 GO:0048589 GO:0048856 GO:0048869 GO:0050789 GO:0050896 GO:0051301 GO:0051716 GO:0060255 GO:0060560 GO:0065007 GO:0070370 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0090501 GO:0090503 GO:0097159 GO:0140098 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03008 ko03018 ko04016 map03008 map03018 map04016

Pfam Domains

Protein Families

XRN_N zf-CCHC

Protein Analysis

553

Amino Acids

61.23

Weight (kDa)

4.67

Isoelectric Point (pI)

25.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_1	PF00232	86 - 542	5.2e-135	Glycosyl hydrolase family 1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0007016)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G54490 AT1G54490
fragaria_vesca	FvH4_6g03690 FvH4_6g03690
malus_domestica	MD04G1219200.v1.1 MD12G1236200.v1.1
prunus_persica	Prupe.6G338500_v2.0.a1 Prupe.6G338500_v2.0.a1
pyrus_communis	pycom04g19450 pycom12g21730
rosa_chinensis	RchiOBHm_Chr3g0452231
rosa_laevigata	RLG00000025615
rosa_multiflora	Rmu_sc0037132.1_g000001 Rmu_sc0041263.1_g000001
rosa_roxburghii	Rroxscaffold_164G00435930 Rroxscaffold_6G00429350
rosa_rugosa	Rorug02G0639400
rosa_samantha	Rh3AG041300 Rh3BG043000 Rh3BG043200 Rh3CG041400 Rh3CG041600 Rh3DG042300 Rh3DG042500
rosa_wichuraiana	Rw3G003160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	813
AccB7I	CCANNNNNTGG	1 cut(s)	480
AccI	GTMKAC	1 cut(s)	1176
AccII	CGCG	1 cut(s)	212
AccIII	TCCGGA	1 cut(s)	1360
AclWI	GGATC	7 cut(s)	325, 800, 1197, 1231, 1440, 1518, 1531
AcoI	YGGCCR	3 cut(s)	36, 207, 1578
AcsI	RAATTY	3 cut(s)	903, 1067, 1416
AcuI	CTGAAG	3 cut(s)	46, 348, 1334
AcvI	CACGTG	1 cut(s)	351
AfaI	GTAC	3 cut(s)	638, 725, 1155
AfiI	CCNNNNNNNGG	7 cut(s)	351, 421, 480, 887, 1495, 1519, 1605
AflII	CTTAAG	1 cut(s)	649
AflIII	ACRYGT	1 cut(s)	1275
AgsI	TTSAA	6 cut(s)	280, 676, 700, 920, 1629, 1656
AjiI	CACGTC	1 cut(s)	430
AjnI	CCWGG	5 cut(s)	254, 525, 1255, 1512, 1604
AjuI	GAANNNNNNNTTGG	2 cut(s)	959, 991
AleI	CACNNNNGTG	1 cut(s)	751
AluBI	AGCT	5 cut(s)	18, 57, 1043, 1263, 1463
AluI	AGCT	5 cut(s)	18, 57, 1043, 1263, 1463
Alw21I	GWGCWC	2 cut(s)	59, 1265
Alw26I	GTCTC	2 cut(s)	61, 1553
AlwI	GGATC	7 cut(s)	325, 800, 1197, 1231, 1440, 1518, 1531
AlwNI	CAGNNNCTG	1 cut(s)	197
Aor13HI	TCCGGA	1 cut(s)	1360
AoxI	GGCC	5 cut(s)	36, 138, 207, 1057, 1578
ApeKI	GCWGC	6 cut(s)	797, 851, 962, 1148, 1247, 1463
ApoI	RAATTY	3 cut(s)	903, 1067, 1416
AspLEI	GCGC	3 cut(s)	49, 293, 1247
AspS9I	GGNCC	2 cut(s)	138, 341
AsuHPI	GGTGA	4 cut(s)	64, 103, 1031, 1132
AsuII	TTCGAA	1 cut(s)	1414
AvaII	GGWCC	1 cut(s)	341
BaeGI	GKGCMC	1 cut(s)	1501
BalI	TGGCCA	1 cut(s)	1580
BamHI	GGATCC	1 cut(s)	1523
BanII	GRGCYC	5 cut(s)	59, 1008, 1103, 1239, 1265
BauI	CACGAG	1 cut(s)	1368
BbrPI	CACGTG	1 cut(s)	351
Bbv12I	GWGCWC	2 cut(s)	59, 1265
BbvI	GCAGC	6 cut(s)	784, 863, 974, 1135, 1234, 1450
BceAI	ACGGC	4 cut(s)	63, 83, 383, 781
BciT130I	CCWGG	5 cut(s)	256, 527, 1257, 1514, 1606
BciVI	GTATCC	2 cut(s)	451, 1290
BclI	TGATCA	1 cut(s)	127
BcoDI	GTCTC	2 cut(s)	61, 1553
BfaI	CTAG	1 cut(s)	117
BfmI	CTRYAG	2 cut(s)	846, 1149
BfoI	RGCGCY	2 cut(s)	50, 1248
BfrI	CTTAAG	1 cut(s)	649
BfuI	GTATCC	2 cut(s)	451, 1290
BglII	AGATCT	1 cut(s)	1269
BmcAI	AGTACT	1 cut(s)	725
Bme1390I	CCNGG	5 cut(s)	256, 527, 1257, 1514, 1606
Bme18I	GGWCC	1 cut(s)	341
BmgBI	CACGTC	1 cut(s)	430
BmgT120I	GGNCC	2 cut(s)	138, 341
BmiI	GGNNCC	5 cut(s)	343, 505, 1005, 1236, 1525
BmrFI	CCNGG	5 cut(s)	256, 527, 1257, 1514, 1606
BmrI	ACTGGG	1 cut(s)	736
BmsI	GCATC	2 cut(s)	778, 1444
BmuI	ACTGGG	1 cut(s)	736
BpmI	CTGGAG	3 cut(s)	1022, 1120, 1535
Bpu14I	TTCGAA	1 cut(s)	1414
Bsa29I	ATCGAT	1 cut(s)	537
BsaAI	YACGTR	2 cut(s)	351, 1276
BsaI	GGTCTC	1 cut(s)	1553
BsaJI	CCNNGG	3 cut(s)	210, 255, 1256
BsaWI	WCCGGW	1 cut(s)	1360
BsaXI	ACNNNNNCTCC	6 cut(s)	162, 192, 455, 485, 1118, 1148
Bsc4I	CCNNNNNNNGG	7 cut(s)	351, 421, 480, 887, 1495, 1519, 1605
Bse118I	RCCGGY	1 cut(s)	49
Bse1I	ACTGG	2 cut(s)	630, 731
BseAI	TCCGGA	1 cut(s)	1360
BseBI	CCWGG	5 cut(s)	256, 527, 1257, 1514, 1606
BseCI	ATCGAT	1 cut(s)	537
BseDI	CCNNGG	3 cut(s)	210, 255, 1256
BseGI	GGATG	3 cut(s)	265, 998, 1060
BseLI	CCNNNNNNNGG	7 cut(s)	351, 421, 480, 887, 1495, 1519, 1605
BseMII	CTCAG	3 cut(s)	1257, 1283, 1338
BseNI	ACTGG	2 cut(s)	630, 731
BseRI	GAGGAG	1 cut(s)	906
BseSI	GKGCMC	1 cut(s)	1501
BseXI	GCAGC	6 cut(s)	784, 863, 974, 1135, 1234, 1450
BsgI	GTGCAG	2 cut(s)	210, 1499
Bsh1236I	CGCG	1 cut(s)	212
Bsh1285I	CGRYCG	1 cut(s)	715
BshFI	GGCC	5 cut(s)	38, 140, 209, 1059, 1580
BshVI	ATCGAT	1 cut(s)	537
BsiEI	CGRYCG	1 cut(s)	715
BsiHKAI	GWGCWC	2 cut(s)	59, 1265
BsiSI	CCGG	2 cut(s)	50, 1361
BslI	CCNNNNNNNGG	7 cut(s)	351, 421, 480, 887, 1495, 1519, 1605
BsmAI	GTCTC	2 cut(s)	61, 1553
BsmI	GAATGC	1 cut(s)	974
BsnI	GGCC	5 cut(s)	38, 140, 209, 1059, 1580
Bso31I	GGTCTC	1 cut(s)	1553
Bsp119I	TTCGAA	1 cut(s)	1414
Bsp1286I	GDGCHC	6 cut(s)	59, 1008, 1103, 1239, 1265, 1501
Bsp13I	TCCGGA	1 cut(s)	1360
BspANI	GGCC	5 cut(s)	38, 140, 209, 1059, 1580
BspCNI	CTCAG	3 cut(s)	1258, 1284, 1339
BspDI	ATCGAT	1 cut(s)	537
BspEI	TCCGGA	1 cut(s)	1360
BspFNI	CGCG	1 cut(s)	212
BspLI	GGNNCC	5 cut(s)	343, 505, 1005, 1236, 1525
BspMAI	CTGCAG	1 cut(s)	1153
BspPI	GGATC	7 cut(s)	325, 800, 1197, 1231, 1440, 1518, 1531
BspT104I	TTCGAA	1 cut(s)	1414
BspTI	CTTAAG	1 cut(s)	649
BspTNI	GGTCTC	1 cut(s)	1553
BsrFI	RCCGGY	1 cut(s)	49
BsrI	ACTGG	2 cut(s)	630, 731
BssAI	RCCGGY	1 cut(s)	49
BssECI	CCNNGG	3 cut(s)	210, 255, 1256
BssSI	CACGAG	1 cut(s)	1368
Bst2BI	CACGAG	1 cut(s)	1368
Bst2UI	CCWGG	5 cut(s)	256, 527, 1257, 1514, 1606
Bst4CI	ACNGT	7 cut(s)	91, 205, 379, 515, 600, 1216, 1547
Bst6I	CTCTTC	1 cut(s)	1386
BstAFI	CTTAAG	1 cut(s)	649
BstAPI	GCANNNNNTGC	1 cut(s)	797
BstBAI	YACGTR	2 cut(s)	351, 1276
BstBI	TTCGAA	1 cut(s)	1414
BstC8I	GCNNGC	1 cut(s)	1203
BstDEI	CTNAG	4 cut(s)	14, 1266, 1292, 1347
BstDSI	CCRYGG	1 cut(s)	210
BstEII	GGTNACC	1 cut(s)	1484
BstF5I	GGATG	3 cut(s)	265, 998, 1060
BstFNI	CGCG	1 cut(s)	212
BstH2I	RGCGCY	2 cut(s)	50, 1248
BstHHI	GCGC	3 cut(s)	49, 293, 1247
BstMAI	GTCTC	2 cut(s)	61, 1553
BstMCI	CGRYCG	1 cut(s)	715
BstMWI	GCNNNNNNNGC	8 cut(s)	44, 215, 299, 788, 797, 851, 971, 1463
BstNI	CCWGG	5 cut(s)	256, 527, 1257, 1514, 1606
BstNSI	RCATGY	1 cut(s)	1205
BstPI	GGTNACC	1 cut(s)	1484
BstSCI	CCNGG	5 cut(s)	254, 525, 1255, 1512, 1604
BstSFI	CTRYAG	2 cut(s)	846, 1149
BstSLI	GKGCMC	1 cut(s)	1501
BstUI	CGCG	1 cut(s)	212
BstV1I	GCAGC	6 cut(s)	784, 863, 974, 1135, 1234, 1450
BstX2I	RGATCY	3 cut(s)	317, 1269, 1523
BstXI	CCANNNNNNTGG	3 cut(s)	625, 753, 1216
BstYI	RGATCY	3 cut(s)	317, 1269, 1523
Bsu15I	ATCGAT	1 cut(s)	537
BsuI	GTATCC	2 cut(s)	451, 1290
BsuRI	GGCC	5 cut(s)	38, 140, 209, 1059, 1580
BsuTUI	ATCGAT	1 cut(s)	537
BtgI	CCRYGG	1 cut(s)	210
BtrI	CACGTC	1 cut(s)	430
BtsCI	GGATG	3 cut(s)	265, 998, 1060
BtsI	GCAGTG	1 cut(s)	661
BtsIMutI	CAGTG	7 cut(s)	201, 596, 623, 661, 1221, 1499, 1557
Cac8I	GCNNGC	1 cut(s)	1203
CaiI	CAGNNNCTG	1 cut(s)	197
CfoI	GCGC	3 cut(s)	49, 293, 1247
Cfr10I	RCCGGY	1 cut(s)	49
Cfr13I	GGNCC	2 cut(s)	138, 341
Cfr42I	CCGCGG	1 cut(s)	213
ClaI	ATCGAT	1 cut(s)	537
Csp6I	GTAC	3 cut(s)	637, 724, 1154
CviAII	CATG	4 cut(s)	156, 475, 842, 1202
CviQI	GTAC	3 cut(s)	637, 724, 1154
DdeI	CTNAG	4 cut(s)	14, 1266, 1292, 1347
EaeI	YGGCCR	3 cut(s)	36, 207, 1578
Eam1104I	CTCTTC	1 cut(s)	1386
EarI	CTCTTC	1 cut(s)	1386
EciI	GGCGGA	1 cut(s)	1588
Ecl136II	GAGCTC	2 cut(s)	57, 1263
Eco24I	GRGCYC	5 cut(s)	59, 1008, 1103, 1239, 1265
Eco31I	GGTCTC	1 cut(s)	1553
Eco32I	GATATC	1 cut(s)	1358
Eco47I	GGWCC	1 cut(s)	341
Eco53kI	GAGCTC	2 cut(s)	57, 1263
Eco57I	CTGAAG	3 cut(s)	46, 348, 1334
Eco72I	CACGTG	1 cut(s)	351
Eco91I	GGTNACC	1 cut(s)	1484
EcoICRI	GAGCTC	2 cut(s)	57, 1263
EcoO109I	RGGNCCY	1 cut(s)	341
EcoO65I	GGTNACC	1 cut(s)	1484
EcoRI	GAATTC	3 cut(s)	903, 1067, 1416
EcoRII	CCWGG	5 cut(s)	254, 525, 1255, 1512, 1604
EcoRV	GATATC	1 cut(s)	1358
EcoT38I	GRGCYC	5 cut(s)	59, 1008, 1103, 1239, 1265
FaeI	CATG	4 cut(s)	159, 478, 845, 1205
FatI	CATG	4 cut(s)	155, 474, 841, 1201
FauI	CCCGC	2 cut(s)	352, 954
FauNDI	CATATG	2 cut(s)	682, 1105
FbaI	TGATCA	1 cut(s)	127
FblI	GTMKAC	1 cut(s)	1176
FokI	GGATG	3 cut(s)	272, 1005, 1067
FriOI	GRGCYC	5 cut(s)	59, 1008, 1103, 1239, 1265
FspBI	CTAG	1 cut(s)	117
GlaI	GCGC	3 cut(s)	48, 292, 1246
GsuI	CTGGAG	3 cut(s)	1022, 1120, 1535
HaeII	RGCGCY	2 cut(s)	50, 1248
HaeIII	GGCC	5 cut(s)	38, 140, 209, 1059, 1580
HapII	CCGG	2 cut(s)	50, 1361
HhaI	GCGC	3 cut(s)	49, 293, 1247
Hin1II	CATG	4 cut(s)	159, 478, 845, 1205
Hin6I	GCGC	3 cut(s)	47, 291, 1245
HinP1I	GCGC	3 cut(s)	47, 291, 1245
HindIII	AAGCTT	2 cut(s)	16, 1041
HinfI	GANTC	4 cut(s)	173, 404, 468, 489
HpaII	CCGG	2 cut(s)	50, 1361
HphI	GGTGA	4 cut(s)	64, 103, 1031, 1132
Hpy166II	GTNNAC	3 cut(s)	1123, 1177, 1219
Hpy188I	TCNGA	4 cut(s)	146, 909, 1228, 1267
Hpy188III	TCNNGA	8 cut(s)	64, 307, 321, 486, 1001, 1137, 1283, 1361
Hpy8I	GTNNAC	3 cut(s)	1123, 1177, 1219
Hpy99I	CGWCG	3 cut(s)	37, 431, 563
HpyAV	CCTTC	4 cut(s)	70, 308, 323, 1280
HpyCH4III	ACNGT	7 cut(s)	91, 205, 379, 515, 600, 1216, 1547
HpyCH4IV	ACGT	4 cut(s)	32, 350, 429, 1275
HpyCH4V	TGCA	7 cut(s)	191, 433, 791, 962, 1151, 1250, 1480
HpyF10VI	GCNNNNNNNGC	8 cut(s)	44, 215, 299, 788, 797, 851, 971, 1463
HpyF3I	CTNAG	4 cut(s)	14, 1266, 1292, 1347
HpySE526I	ACGT	4 cut(s)	32, 350, 429, 1275
Hsp92II	CATG	4 cut(s)	159, 478, 845, 1205
HspAI	GCGC	3 cut(s)	47, 291, 1245
Kpn2I	TCCGGA	1 cut(s)	1360
Ksp22I	TGATCA	1 cut(s)	127
KspI	CCGCGG	1 cut(s)	213
LmnI	GCTCC	4 cut(s)	62, 1003, 1234, 1260
Lsp1109I	GCAGC	6 cut(s)	784, 863, 974, 1135, 1234, 1450
LweI	GCATC	2 cut(s)	778, 1444
MaeI	CTAG	1 cut(s)	117
MaeII	ACGT	4 cut(s)	32, 350, 429, 1275
MaeIII	GTNAC	7 cut(s)	181, 193, 250, 359, 592, 656, 1484
MboII	GAAGA	2 cut(s)	810, 1403
MflI	RGATCY	3 cut(s)	317, 1269, 1523
MhlI	GDGCHC	6 cut(s)	59, 1008, 1103, 1239, 1265, 1501
MlsI	TGGCCA	1 cut(s)	1580
MluCI	AATT	5 cut(s)	123, 147, 903, 1067, 1416
MluNI	TGGCCA	1 cut(s)	1580
MmeI	TCCRAC	1 cut(s)	110
MnlI	CCTC	9 cut(s)	129, 326, 332, 523, 661, 884, 1044, 1144, 1387
Mox20I	TGGCCA	1 cut(s)	1580
MroI	TCCGGA	1 cut(s)	1360
MscI	TGGCCA	1 cut(s)	1580
MseI	TTAA	1 cut(s)	650
MslI	CAYNNNNRTG	4 cut(s)	751, 1118, 1184, 1214
Msp20I	TGGCCA	1 cut(s)	1580
MspA1I	CMGCKG	4 cut(s)	212, 642, 1148, 1445
MspCI	CTTAAG	1 cut(s)	649
MspI	CCGG	2 cut(s)	50, 1361
MspR9I	CCNGG	5 cut(s)	256, 527, 1257, 1514, 1606
Mva1269I	GAATGC	1 cut(s)	974
MvaI	CCWGG	5 cut(s)	256, 527, 1257, 1514, 1606
MvnI	CGCG	1 cut(s)	212
MwoI	GCNNNNNNNGC	8 cut(s)	44, 215, 299, 788, 797, 851, 971, 1463
NdeI	CATATG	2 cut(s)	682, 1105
NlaIII	CATG	4 cut(s)	159, 478, 845, 1205
NlaIV	GGNNCC	5 cut(s)	343, 505, 1005, 1236, 1525
NmeAIII	GCCGAG	1 cut(s)	140
NmuCI	GTSAC	2 cut(s)	592, 656
NspI	RCATGY	1 cut(s)	1205
NspV	TTCGAA	1 cut(s)	1414
OliI	CACNNNNGTG	1 cut(s)	751
PaeI	GCATGC	1 cut(s)	1205
PcsI	WCGNNNNNNNCGW	2 cut(s)	29, 801
PctI	GAATGC	1 cut(s)	974
PfeI	GAWTC	4 cut(s)	173, 404, 468, 489
PflMI	CCANNNNNTGG	1 cut(s)	480
Ple19I	CGATCG	1 cut(s)	715
PmaCI	CACGTG	1 cut(s)	351
PmlI	CACGTG	1 cut(s)	351
Ppu21I	YACGTR	2 cut(s)	351, 1276
PpuMI	RGGWCCY	1 cut(s)	341
PsiI	TTATAA	1 cut(s)	813
Psp124BI	GAGCTC	2 cut(s)	59, 1265
Psp5II	RGGWCCY	1 cut(s)	341
Psp6I	CCWGG	5 cut(s)	254, 525, 1255, 1512, 1604
PspCI	CACGTG	1 cut(s)	351
PspEI	GGTNACC	1 cut(s)	1484
PspGI	CCWGG	5 cut(s)	254, 525, 1255, 1512, 1604
PspN4I	GGNNCC	5 cut(s)	343, 505, 1005, 1236, 1525
PspPI	GGNCC	2 cut(s)	138, 341
PspPPI	RGGWCCY	1 cut(s)	341
PstI	CTGCAG	1 cut(s)	1153
PstNI	CAGNNNCTG	1 cut(s)	197
PsuI	RGATCY	3 cut(s)	317, 1269, 1523
PvuI	CGATCG	1 cut(s)	715
RsaI	GTAC	3 cut(s)	638, 725, 1155
RsaNI	GTAC	3 cut(s)	637, 724, 1154
RseI	CAYNNNNRTG	4 cut(s)	751, 1118, 1184, 1214
SacI	GAGCTC	2 cut(s)	59, 1265
SacII	CCGCGG	1 cut(s)	213
SaqAI	TTAA	1 cut(s)	650
Sau96I	GGNCC	2 cut(s)	138, 341
ScaI	AGTACT	1 cut(s)	725
ScrFI	CCNGG	5 cut(s)	256, 527, 1257, 1514, 1606
SduI	GDGCHC	6 cut(s)	59, 1008, 1103, 1239, 1265, 1501
SfaNI	GCATC	2 cut(s)	778, 1444
SfcI	CTRYAG	2 cut(s)	846, 1149
Sfr303I	CCGCGG	1 cut(s)	213
SfuI	TTCGAA	1 cut(s)	1414
SgrAI	CRCCGGYG	1 cut(s)	49
SgrBI	CCGCGG	1 cut(s)	213
SinI	GGWCC	1 cut(s)	341
SmiMI	CAYNNNNRTG	4 cut(s)	751, 1118, 1184, 1214
SmlI	CTYRAG	1 cut(s)	649
SmoI	CTYRAG	1 cut(s)	649
SphI	GCATGC	1 cut(s)	1205
Sse9I	AATT	5 cut(s)	123, 147, 903, 1067, 1416
SspMI	CTAG	1 cut(s)	117
SstI	GAGCTC	2 cut(s)	59, 1265
StyD4I	CCNGG	5 cut(s)	254, 525, 1255, 1512, 1604
TaaI	ACNGT	7 cut(s)	91, 205, 379, 515, 600, 1216, 1547
TaiI	ACGT	4 cut(s)	35, 353, 432, 1278
TaqI	TCGA	8 cut(s)	537, 558, 609, 715, 978, 1400, 1414, 1540
TasI	AATT	5 cut(s)	123, 147, 903, 1067, 1416
TatI	WGTACW	2 cut(s)	636, 723
TauI	GCSGC	5 cut(s)	212, 785, 1148, 1445, 1604
TfiI	GAWTC	4 cut(s)	173, 404, 468, 489
Tru1I	TTAA	1 cut(s)	650
Tru9I	TTAA	1 cut(s)	650
TscAI	CASTG	7 cut(s)	208, 603, 630, 661, 1221, 1506, 1564
TseFI	GTSAC	2 cut(s)	592, 656
TseI	GCWGC	6 cut(s)	797, 851, 962, 1148, 1247, 1463
Tsp45I	GTSAC	2 cut(s)	592, 656
TspDTI	ATGAA	2 cut(s)	544, 1052
TspGWI	ACGGA	2 cut(s)	516, 1236
TspRI	CASTG	7 cut(s)	208, 603, 630, 661, 1221, 1506, 1564
Van91I	CCANNNNNTGG	1 cut(s)	480
Vha464I	CTTAAG	1 cut(s)	649
VpaK11BI	GGWCC	1 cut(s)	341
XapI	RAATTY	3 cut(s)	903, 1067, 1416
XceI	RCATGY	1 cut(s)	1205
XmiI	GTMKAC	1 cut(s)	1176
XspI	CTAG	1 cut(s)	117
ZrmI	AGTACT	1 cut(s)	725

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.