AT1G56720
ERF Family

belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
21263344 .. 21266469
3126 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G56720.3

Sequence Viewer

Length: 1479 bp
ATGGGAGGTGACTTGAAAAGCCAGCTATCTAGAGAGAGCCATGTGTTTGGACTTAAGGTGTGGGAAGTAATTGGTATAGCTGTTGCATTGCTCATCATAGCTATCCTCTCTGTTCTTTCGTGTTGTCTTACTTCGAAAAAGAAATCAAGAAGATCGAAAACCGGTCTTCCGGTTATCCAAACTCCTCCGGTGGTCTCCAAAGAGATCAGAGAAGTGAGAGTTGAGCATGTCTCAGCTAGTAACTTTGCTCCTGGTGAAGGCATTCTTCTAACAATTCAGGACAAAAATAACAAAGACTCAGAAAAAGTCATGGTTCATTTGGATATGAGGAAGAAGAGAAGTAGTAGTGGCCGGTCAGGGTCGTTTCATCATTTAGAGATCATAGATAAACATTCTGACTCTGCTGAAGAAGTTTCTGCTTCTTCATCATTGTATAATATTGCAACTCCATCTCCATTGTCTGGTTTGCCTGAATCTCACCTTGGTTGGGGACACTGGTTTACTTTGAGAGATCTTGAAACAGCAACTAACAGATTCTCTAAAGAGAATGTTATAGGTGAAGGCGGTTACGGTGTTGTCTACAGAGGAGAGTTAATGAATGGAACTCCTGTTGCAGTTAAAAAGATTCTTAACCAGTTGGGACAAGCTGAGAAAGAGTTTCGAGTCGAGGTTGATGCTATCGGTCATGTGCGGCACAAGAACTTGGTTCGGCTTCTTGGTTACTGCATTGAAGGCACACACAGGATATTGGTTTACGAATATGTGAATAATGGAAACTTAGAACAATGGCTTCATGGAGCAATGAGACAACATGGATATCTAACTTGGGAAGCAAGGATGAAGGTTCTGATCGGCACATCAAAAGCTCTTGCATATCTGCATGAAGCAATTGAGCCAAAAGTAGTGCATAGAGACATCAAGTCAAGCAACATTCTGATCAATGACGAATTCAACGCAAAGGTTTCAGATTTTGGCCTTGCTAAGTTGCTTGGTGCTGGAAAAAGCCATGTGACAACTCGAGTGATGGGAACATTTGGGTACGTTGCTCCTGAATATGCAAACTCAGGGTTGTTAAATGAAAAGAGTGATGTCTACAGCTTTGGTGTTGTTCTCTTAGAAGCAATCACAGGACGAGACCCTGTGGATTACGGACGTCCTGCTCATGAGGTGAATCTAGTGGACTGGTTGAAGATGATGGTTGGGACAAGACGATCAGAGGAAGTAGTGGATCCAAACATAGAAGTGAAGCCACCAACAAGGTCACTGAAACGAGCTCTTTTGACGGCTCTAAGATGTGTTGATCCAGATTCGGATAAGCGGCCGAAGATGAGCCAAGTTGTACGTATGCTTGAGTCTGAAGAATACCCCATTCCAAGAGAGGACCGAAGGCGTTCTAGAACGCGAGAAGGGAGTATGGAGATAAACTCAGACACTGACATGAGTACTCCAGTTTCAAGATCACAGAGCAAGAGACAATAA

Protein Analysis

492

Amino Acids

54.94

Weight (kDa)

9.08

Isoelectric Point (pI)

47.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 180 - 448 1.2e-46 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 182 - 450 8.3e-46 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1156
AccB7I CCANNNNNTGG 1 cut(s) 461
AccI GTMKAC 2 cut(s) 579, 1092
AccII CGCG 1 cut(s) 1402
AciI CCGC 3 cut(s) 564, 691, 1318
AclWI GGATC 3 cut(s) 1223, 1236, 1295
AcoI YGGCCR 2 cut(s) 349, 1319
AcsI RAATTY 1 cut(s) 947
AcuI CTGAAG 2 cut(s) 426, 1377
AcyI GRCGYC 1 cut(s) 1153
AfaI GTAC 3 cut(s) 1040, 1341, 1444
AfiI CCNNNNNNNGG 3 cut(s) 257, 461, 487
AflII CTTAAG 1 cut(s) 53
AgeI ACCGGT 1 cut(s) 161
AgsI TTSAA 6 cut(s) 16, 518, 731, 952, 1189, 1455
AhdI GACNNNNNGTC 1 cut(s) 919
AjnI CCWGG 1 cut(s) 250
AjuI GAANNNNNNNTTGG 2 cut(s) 465, 497
AluBI AGCT 8 cut(s) 25, 80, 101, 236, 647, 866, 1098, 1274
AluI AGCT 8 cut(s) 25, 80, 101, 236, 647, 866, 1098, 1274
Alw21I GWGCWC 1 cut(s) 1276
Alw26I GTCTC 6 cut(s) 199, 235, 799, 906, 1128, 1465
AlwI GGATC 3 cut(s) 1223, 1236, 1295
AlwNI CAGNNNCTG 1 cut(s) 1433
Ama87I CYCGRG 1 cut(s) 1017
AoxI GGCC 3 cut(s) 349, 973, 1319
ApoI RAATTY 1 cut(s) 947
AsiGI ACCGGT 1 cut(s) 161
Asp700I GAANNNNTTC 2 cut(s) 261, 1390
AspS9I GGNCC 1 cut(s) 1381
AsuHPI GGTGA 5 cut(s) 20, 266, 470, 569, 1180
AsuII TTCGAA 1 cut(s) 134
AvaI CYCGRG 1 cut(s) 1017
AvaII GGWCC 1 cut(s) 1381
BamHI GGATCC 1 cut(s) 1228
BanII GRGCYC 1 cut(s) 1276
BbsI GAAGAC 1 cut(s) 158
Bbv12I GWGCWC 1 cut(s) 1276
BccI CCATC 3 cut(s) 457, 1018, 1189
BceAI ACGGC 1 cut(s) 1299
BcgI CGANNNNNNTGC 2 cut(s) 656, 690
BciT130I CCWGG 1 cut(s) 252
BclI TGATCA 1 cut(s) 936
BcoDI GTCTC 6 cut(s) 199, 235, 799, 906, 1128, 1465
BfaI CTAG 4 cut(s) 30, 237, 1175, 1395
BfmI CTRYAG 2 cut(s) 580, 1093
BfrI CTTAAG 1 cut(s) 53
BglII AGATCT 1 cut(s) 511
BisI GCNGC 2 cut(s) 692, 1319
BlsI GCNGC 2 cut(s) 693, 1320
BmcAI AGTACT 1 cut(s) 1444
Bme1390I CCNGG 1 cut(s) 252
Bme18I GGWCC 1 cut(s) 1381
BmeRI GACNNNNNGTC 1 cut(s) 919
BmeT110I CYCGRG 1 cut(s) 1017
BmgT120I GGNCC 1 cut(s) 1381
BmiI GGNNCC 1 cut(s) 1230
BmrFI CCNGG 1 cut(s) 252
BmsI GCATC 1 cut(s) 664
BpiI GAAGAC 1 cut(s) 158
BplI GAGNNNNNCTC 4 cut(s) 215, 247, 1409, 1441
BpmI CTGGAG 1 cut(s) 1431
Bpu14I TTCGAA 1 cut(s) 134
BpuEI CTTGAG 1 cut(s) 1370
BsaAI YACGTR 1 cut(s) 1343
BsaHI GRCGYC 1 cut(s) 1153
BsaI GGTCTC 2 cut(s) 199, 1128
BsaJI CCNNGG 1 cut(s) 481
BsaWI WCCGGW 3 cut(s) 161, 169, 187
BsaXI ACNNNNNCTCC 2 cut(s) 436, 466
Bsc4I CCNNNNNNNGG 3 cut(s) 257, 461, 487
Bse118I RCCGGY 2 cut(s) 161, 351
Bse1I ACTGG 4 cut(s) 500, 634, 1187, 1448
Bse3DI GCAATG 2 cut(s) 86, 807
BseBI CCWGG 1 cut(s) 252
BseDI CCNNGG 1 cut(s) 481
BseGI GGATG 1 cut(s) 843
BseLI CCNNNNNNNGG 3 cut(s) 257, 461, 487
BseMI GCAATG 2 cut(s) 86, 807
BseMII CTCAG 5 cut(s) 246, 312, 639, 1077, 1440
BseNI ACTGG 4 cut(s) 500, 634, 1187, 1448
BseRI GAGGAG 2 cut(s) 174, 600
BseX3I CGGCCG 1 cut(s) 1319
Bsh1236I CGCG 1 cut(s) 1402
Bsh1285I CGRYCG 1 cut(s) 1322
BshFI GGCC 3 cut(s) 351, 975, 1321
BshTI ACCGGT 1 cut(s) 161
BsiEI CGRYCG 1 cut(s) 1322
BsiHKAI GWGCWC 1 cut(s) 1276
BsiHKCI CYCGRG 1 cut(s) 1017
BsiSI CCGG 4 cut(s) 162, 170, 188, 352
BslFI GGGAC 3 cut(s) 504, 654, 1216
BslI CCNNNNNNNGG 3 cut(s) 257, 461, 487
BsmAI GTCTC 6 cut(s) 199, 235, 799, 906, 1128, 1465
BsmFI GGGAC 3 cut(s) 504, 654, 1216
BsmI GAATGC 1 cut(s) 261
BsnI GGCC 3 cut(s) 351, 975, 1321
Bso31I GGTCTC 2 cut(s) 199, 1128
BsoBI CYCGRG 1 cut(s) 1017
Bsp119I TTCGAA 1 cut(s) 134
Bsp1286I GDGCHC 1 cut(s) 1276
BspACI CCGC 3 cut(s) 564, 691, 1318
BspANI GGCC 3 cut(s) 351, 975, 1321
BspCNI CTCAG 5 cut(s) 245, 311, 640, 1076, 1439
BspFNI CGCG 1 cut(s) 1402
BspHI TCATGA 1 cut(s) 1162
BspLI GGNNCC 1 cut(s) 1230
BspPI GGATC 3 cut(s) 1223, 1236, 1295
BspT104I TTCGAA 1 cut(s) 134
BspTI CTTAAG 1 cut(s) 53
BspTNI GGTCTC 2 cut(s) 199, 1128
BsrDI GCAATG 2 cut(s) 86, 807
BsrFI RCCGGY 2 cut(s) 161, 351
BsrI ACTGG 4 cut(s) 500, 634, 1187, 1448
BssAI RCCGGY 2 cut(s) 161, 351
BssECI CCNNGG 1 cut(s) 481
BssNI GRCGYC 1 cut(s) 1153
BssT1I CCWWGG 1 cut(s) 481
Bst2UI CCWGG 1 cut(s) 252
Bst4CI ACNGT 1 cut(s) 572
Bst6I CTCTTC 1 cut(s) 329
BstACI GRCGYC 1 cut(s) 1153
BstAFI CTTAAG 1 cut(s) 53
BstBAI YACGTR 1 cut(s) 1343
BstBI TTCGAA 1 cut(s) 134
BstC8I GCNNGC 1 cut(s) 23
BstDEI CTNAG 9 cut(s) 232, 298, 648, 778, 981, 1063, 1114, 1289, 1426
BstENI CCTNNNNNAGG 1 cut(s) 255
BstF5I GGATG 1 cut(s) 843
BstFNI CGCG 1 cut(s) 1402
BstMAI GTCTC 6 cut(s) 199, 235, 799, 906, 1128, 1465
BstMCI CGRYCG 1 cut(s) 1322
BstMWI GCNNNNNNNGC 1 cut(s) 732
BstNI CCWGG 1 cut(s) 252
BstNSI RCATGY 1 cut(s) 230
BstSCI CCNGG 1 cut(s) 250
BstSFI CTRYAG 2 cut(s) 580, 1093
BstSNI TACGTA 1 cut(s) 1343
BstUI CGCG 1 cut(s) 1402
BstV2I GAAGAC 1 cut(s) 158
BstX2I RGATCY 2 cut(s) 511, 1228
BstXI CCANNNNNNTGG 1 cut(s) 47
BstYI RGATCY 2 cut(s) 511, 1228
BstZI CGGCCG 1 cut(s) 1319
BsuRI GGCC 3 cut(s) 351, 975, 1321
BtsCI GGATG 1 cut(s) 843
BtsIMutI CAGTG 3 cut(s) 493, 1262, 1431
Cac8I GCNNGC 1 cut(s) 23
CaiI CAGNNNCTG 1 cut(s) 1433
CciI TCATGA 1 cut(s) 1162
Cfr10I RCCGGY 2 cut(s) 161, 351
Cfr13I GGNCC 1 cut(s) 1381
Csp6I GTAC 3 cut(s) 1039, 1340, 1443
CspAI ACCGGT 1 cut(s) 161
CviQI GTAC 3 cut(s) 1039, 1340, 1443
DdeI CTNAG 9 cut(s) 232, 298, 648, 778, 981, 1063, 1114, 1289, 1426
DriI GACNNNNNGTC 1 cut(s) 919
EaeI YGGCCR 2 cut(s) 349, 1319
EagI CGGCCG 1 cut(s) 1319
Eam1104I CTCTTC 1 cut(s) 329
Eam1105I GACNNNNNGTC 1 cut(s) 919
EarI CTCTTC 1 cut(s) 329
Ecl136II GAGCTC 1 cut(s) 1274
EclXI CGGCCG 1 cut(s) 1319
Eco105I TACGTA 1 cut(s) 1343
Eco130I CCWWGG 1 cut(s) 481
Eco24I GRGCYC 1 cut(s) 1276
Eco31I GGTCTC 2 cut(s) 199, 1128
Eco32I GATATC 1 cut(s) 818
Eco47I GGWCC 1 cut(s) 1381
Eco52I CGGCCG 1 cut(s) 1319
Eco53kI GAGCTC 1 cut(s) 1274
Eco57I CTGAAG 2 cut(s) 426, 1377
Eco88I CYCGRG 1 cut(s) 1017
EcoICRI GAGCTC 1 cut(s) 1274
EcoNI CCTNNNNNAGG 1 cut(s) 255
EcoRI GAATTC 1 cut(s) 947
EcoRII CCWGG 1 cut(s) 250
EcoRV GATATC 1 cut(s) 818
EcoT14I CCWWGG 1 cut(s) 481
EcoT38I GRGCYC 1 cut(s) 1276
ErhI CCWWGG 1 cut(s) 481
FalI AAGNNNNNCTT 2 cut(s) 249, 281
FaqI GGGAC 3 cut(s) 504, 654, 1216
FbaI TGATCA 1 cut(s) 936
FblI GTMKAC 2 cut(s) 579, 1092
Fnu4HI GCNGC 2 cut(s) 692, 1319
FokI GGATG 1 cut(s) 850
FriOI GRGCYC 1 cut(s) 1276
Fsp4HI GCNGC 2 cut(s) 692, 1319
FspBI CTAG 4 cut(s) 30, 237, 1175, 1395
GluI GCNGC 2 cut(s) 692, 1319
GsuI CTGGAG 1 cut(s) 1431
HaeIII GGCC 3 cut(s) 351, 975, 1321
HapII CCGG 4 cut(s) 162, 170, 188, 352
Hin1I GRCGYC 1 cut(s) 1153
HinfI GANTC 9 cut(s) 296, 398, 473, 534, 625, 663, 1171, 1307, 1352
HpaII CCGG 4 cut(s) 162, 170, 188, 352
HphI GGTGA 5 cut(s) 20, 266, 470, 569, 1180
Hpy166II GTNNAC 5 cut(s) 501, 580, 754, 1093, 1180
Hpy188III TCNNGA 9 cut(s) 30, 147, 278, 515, 1049, 1163, 1304, 1395, 1455
Hpy8I GTNNAC 5 cut(s) 501, 580, 754, 1093, 1180
HpyAV CCTTC 6 cut(s) 251, 554, 725, 835, 1380, 1400
HpyCH4III ACNGT 1 cut(s) 572
HpyCH4IV ACGT 3 cut(s) 1041, 1153, 1342
HpyCH4V TGCA 8 cut(s) 86, 443, 614, 726, 872, 880, 907, 1058
HpyF10VI GCNNNNNNNGC 1 cut(s) 732
HpyF3I CTNAG 9 cut(s) 232, 298, 648, 778, 981, 1063, 1114, 1289, 1426
HpySE526I ACGT 3 cut(s) 1041, 1153, 1342
Hsp92I GRCGYC 1 cut(s) 1153
Ksp22I TGATCA 1 cut(s) 936
LmnI GCTCC 3 cut(s) 253, 797, 1051
LweI GCATC 1 cut(s) 664
MaeI CTAG 4 cut(s) 30, 237, 1175, 1395
MaeII ACGT 3 cut(s) 1041, 1153, 1342
MaeIII GTNAC 6 cut(s) 8, 239, 566, 719, 1009, 1260
MfeI CAATTG 1 cut(s) 888
MflI RGATCY 2 cut(s) 511, 1228
MhlI GDGCHC 1 cut(s) 1276
MluCI AATT 4 cut(s) 69, 273, 888, 947
MlyI GAGTC 4 cut(s) 290, 392, 672, 1361
MnlI CCTC 8 cut(s) 116, 195, 321, 578, 661, 1159, 1210, 1372
MroXI GAANNNNTTC 2 cut(s) 261, 1390
MseI TTAA 5 cut(s) 54, 593, 618, 630, 1073
MslI CAYNNNNRTG 2 cut(s) 1241, 1436
MspCI CTTAAG 1 cut(s) 53
MspI CCGG 4 cut(s) 162, 170, 188, 352
MspR9I CCNGG 1 cut(s) 252
MunI CAATTG 1 cut(s) 888
Mva1269I GAATGC 1 cut(s) 261
MvaI CCWGG 1 cut(s) 252
MvnI CGCG 1 cut(s) 1402
MwoI GCNNNNNNNGC 1 cut(s) 732
NlaIV GGNNCC 1 cut(s) 1230
NmuCI GTSAC 3 cut(s) 8, 1009, 1260
NspI RCATGY 1 cut(s) 230
NspV TTCGAA 1 cut(s) 134
PaeR7I CTCGAG 1 cut(s) 1017
PagI TCATGA 1 cut(s) 1162
PctI GAATGC 1 cut(s) 261
PdmI GAANNNNTTC 2 cut(s) 261, 1390
PfeI GAWTC 5 cut(s) 473, 534, 625, 1171, 1307
PflMI CCANNNNNTGG 1 cut(s) 461
PinAI ACCGGT 1 cut(s) 161
PkrI GCNGC 2 cut(s) 693, 1320
PleI GAGTC 4 cut(s) 290, 392, 671, 1360
PpsI GAGTC 4 cut(s) 290, 392, 671, 1360
Ppu21I YACGTR 1 cut(s) 1343
Psp124BI GAGCTC 1 cut(s) 1276
Psp6I CCWGG 1 cut(s) 250
PspGI CCWGG 1 cut(s) 250
PspN4I GGNNCC 1 cut(s) 1230
PspPI GGNCC 1 cut(s) 1381
PspXI VCTCGAGB 1 cut(s) 1017
PstNI CAGNNNCTG 1 cut(s) 1433
PsuI RGATCY 2 cut(s) 511, 1228
RsaI GTAC 3 cut(s) 1040, 1341, 1444
RsaNI GTAC 3 cut(s) 1039, 1340, 1443
RseI CAYNNNNRTG 2 cut(s) 1241, 1436
SacI GAGCTC 1 cut(s) 1276
SaqAI TTAA 5 cut(s) 54, 593, 618, 630, 1073
SatI GCNGC 2 cut(s) 692, 1319
Sau96I GGNCC 1 cut(s) 1381
ScaI AGTACT 1 cut(s) 1444
SchI GAGTC 4 cut(s) 290, 392, 672, 1361
ScrFI CCNGG 1 cut(s) 252
SduI GDGCHC 1 cut(s) 1276
SfaNI GCATC 1 cut(s) 664
SfcI CTRYAG 2 cut(s) 580, 1093
Sfr274I CTCGAG 1 cut(s) 1017
SfuI TTCGAA 1 cut(s) 134
SinI GGWCC 1 cut(s) 1381
SlaI CTCGAG 1 cut(s) 1017
SmiMI CAYNNNNRTG 2 cut(s) 1241, 1436
SmlI CTYRAG 3 cut(s) 53, 1017, 1349
SmoI CTYRAG 3 cut(s) 53, 1017, 1349
SnaBI TACGTA 1 cut(s) 1343
Sse9I AATT 4 cut(s) 69, 273, 888, 947
SsiI CCGC 3 cut(s) 564, 691, 1318
SspI AATATT 1 cut(s) 439
SspMI CTAG 4 cut(s) 30, 237, 1175, 1395
SstI GAGCTC 1 cut(s) 1276
StyD4I CCNGG 1 cut(s) 250
StyI CCWWGG 1 cut(s) 481
TaaI ACNGT 1 cut(s) 572
TaiI ACGT 3 cut(s) 1044, 1156, 1345
TaqI TCGA 5 cut(s) 134, 155, 661, 666, 1018
TaqII GACCGA 2 cut(s) 671, 1398
TasI AATT 4 cut(s) 69, 273, 888, 947
TatI WGTACW 1 cut(s) 1442
TauI GCSGC 2 cut(s) 694, 1321
TfiI GAWTC 5 cut(s) 473, 534, 625, 1171, 1307
Tru1I TTAA 5 cut(s) 54, 593, 618, 630, 1073
Tru9I TTAA 5 cut(s) 54, 593, 618, 630, 1073
TscAI CASTG 3 cut(s) 500, 1269, 1438
TseFI GTSAC 3 cut(s) 8, 1009, 1260
Tsp45I GTSAC 3 cut(s) 8, 1009, 1260
TspDTI ATGAA 8 cut(s) 305, 356, 414, 611, 782, 854, 897, 1092
TspGWI ACGGA 1 cut(s) 1164
TspRI CASTG 3 cut(s) 500, 1269, 1438
Van91I CCANNNNNTGG 1 cut(s) 461
Vha464I CTTAAG 1 cut(s) 53
VpaK11BI GGWCC 1 cut(s) 1381
XagI CCTNNNNNAGG 1 cut(s) 255
XapI RAATTY 1 cut(s) 947
XbaI TCTAGA 2 cut(s) 29, 1394
XceI RCATGY 1 cut(s) 230
XhoI CTCGAG 1 cut(s) 1017
XmiI GTMKAC 2 cut(s) 579, 1092
XmnI GAANNNNTTC 2 cut(s) 261, 1390
XspI CTAG 4 cut(s) 30, 237, 1175, 1395
ZraI GACGTC 1 cut(s) 1154
ZrmI AGTACT 1 cut(s) 1444
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.