pycom13g12260

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
Physical Location & Seq
Forward (+)
8489792 .. 8492303
2512 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g12260.5

Sequence Viewer

Length: 1503 bp
ATGGCATCTGGTCTTGACACTGTATTAACCAAGAAGACATTTGTCTTCGGTTTAAAGGTTTGGGTATTAACGGGGATCATTGTGGGAGTTTTTATAGTGATGATTCTTGCGGTGCTATCAATTTGTCTTACTTCACGAAAGAGATCCAGAAAGTCTACTGACATGCTTCCTCTGCGCAGAATTCCAAATGATTCAAAGGAAATCAAAGAGATTAGGGTAGATCAAGCTTGTGCAAATAACTATGTACCCCGTAGTAGTTCTTTTCTCACCCTTGGCGATAAATTCAGTGACAGAGAGTCTGAGAAAGTTTTGATCCATAAGAATGGAGATAGTAGCAGTCGATCAGGCTCATTTAACAATGGGGAGAAGGAAAATGTTGGTTCTCAATCTGGAGATGAGAGTGGTGCAGCTTATATGTACGAGCCTTCTTCACAGCCTATATCCGCACCTTCACCTCTATCTGGTCTACCTGAATTCTCTCGCCTTGGTTGGGGTCACTGGTTTACATTAAGGGACCTTGAGTTCGCAACAGGTCAGTTTTCAAAGGAAAATGTCATTGGTGAGGGTGGATATGGAGTTGTTTATCGGGGTAATCTGATTAATGGATCTCCTGTGGCTGTGAAGAAGCTACTCAACAACCTAGGACAAGCAGAGAAGGAATTCAGAGTGGAAGTTGAGGCTATTGGGCATGTACGACACAAAAACTTGGTTCGACTTTTGGGATACTGCATTGAAGGAACCCACAGGTTGCTGGTTTATGAATATGTCAACAACGGAAATTTGGAGCAATGGCTTCATGGAGCTATGCGTCATCATGGATATCTCACATGGGAGGCACGGATGAAAGTTCTCCTTGGCACCGCTAAAGCGCTGGCTTATTTGCATGAGGCCATTGAACCCAAAGTTGTGCATCGAGACATTAAGTCGAGCAATATCTTACTTGATGATGATTTCAATGCTAAGATATCTGATTTTGGTCTGGCAAAGTTGCTAGGTGCCGGGAAGAGTCATATTACAACTAGAGTTATGGGTACCTTTGGATATGTGGCCCCAGAATATGCCAACTCTGGCCTTCTAAATGAGAAGAGTGATGTTTATAGCTTTGGGGTTGTGATTTTGGAAGCAATCACTGGAAGAGATCCGGTGGATTACGGTCGGCCAGCACAAGAGGTAAATTTGGTAGATTGGCTCAAGATGATGGTTGGAAGCAGGCGTTCAGAAGAGGTGGTAGATCCGAACATTGAGACCAAGCCATCTACGAGTGCCCTTAAACGAGCCCTCTTGACTGCACTGAGGTTTGTCGATCCAGATTCTGATAAAAGGCCTAAGATGGGTCAAGTGGTTCGCATGCTTGAATCGGAGGAGTATCCCATACCGCGAGAGGACCGAAGACGGCGAAGAAGTCAAGCAGGGATTACAGAAGCCGAGTCTCTAAATTCTGATACAGATAGGAGTGAGAAGCCAAATACAAAGACAGATAGCAGAAGGAACCGTCGAACATAG

Protein Analysis

501

Amino Acids

55.82

Weight (kDa)

9.11

Isoelectric Point (pI)

51.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 176
Acc65I GGTACC 1 cut(s) 1031
AccB1I GGYRCC 3 cut(s) 857, 995, 1031
AccI GTMKAC 2 cut(s) 155, 466
AccII CGCG 1 cut(s) 1378
AciI CCGC 4 cut(s) 110, 444, 861, 1376
AclWI GGATC 7 cut(s) 83, 138, 307, 613, 1133, 1226, 1298
AcoI YGGCCR 1 cut(s) 1157
AcsI RAATTY 7 cut(s) 180, 281, 473, 659, 778, 1174, 1435
AfaI GTAC 4 cut(s) 246, 419, 693, 1033
AfeI AGCGCT 1 cut(s) 870
AfiI CCNNNNNNNGG 3 cut(s) 461, 490, 1331
AgsI TTSAA 6 cut(s) 195, 543, 734, 896, 955, 1355
AhdI GACNNNNNGTC 2 cut(s) 295, 922
AjuI GAANNNNNNNTTGG 2 cut(s) 540, 572
AloI GAACNNNNNNTCC 2 cut(s) 506, 538
AluBI AGCT 5 cut(s) 227, 410, 628, 803, 1101
AluI AGCT 5 cut(s) 227, 410, 628, 803, 1101
Alw26I GTCTC 3 cut(s) 909, 1238, 1434
AlwI GGATC 7 cut(s) 83, 138, 307, 613, 1133, 1226, 1298
AlwNI CAGNNNCTG 1 cut(s) 1313
Aor51HI AGCGCT 1 cut(s) 870
AoxI GGCC 5 cut(s) 888, 1047, 1069, 1157, 1322
ApeKI GCWGC 1 cut(s) 407
ApoI RAATTY 7 cut(s) 180, 281, 473, 659, 778, 1174, 1435
ArsI GACNNNNNNTTYG 2 cut(s) 506, 538
AseI ATTAAT 1 cut(s) 600
Asp700I GAANNNNTTC 1 cut(s) 659
Asp718I GGTACC 1 cut(s) 1031
AspA2I CCTAGG 1 cut(s) 640
AspLEI GCGC 2 cut(s) 177, 871
AspS9I GGNCC 3 cut(s) 514, 1048, 1384
AsuC2I CCSGG 1 cut(s) 1000
AsuHPI GGTGA 3 cut(s) 259, 444, 572
AvaII GGWCC 2 cut(s) 514, 1384
AvrII CCTAGG 1 cut(s) 640
BaeGI GKGCMC 1 cut(s) 1267
BanI GGYRCC 3 cut(s) 857, 995, 1031
BanII GRGCYC 1 cut(s) 1279
BbsI GAAGAC 3 cut(s) 37, 41, 1396
BbvI GCAGC 1 cut(s) 419
BccI CCATC 3 cut(s) 1192, 1261, 1324
BceAI ACGGC 1 cut(s) 1409
BciVI GTATCC 2 cut(s) 716, 1377
BcnI CCSGG 1 cut(s) 1000
BcoDI GTCTC 3 cut(s) 909, 1238, 1434
BfaI CTAG 3 cut(s) 641, 992, 1020
BfoI RGCGCY 1 cut(s) 872
BfuI GTATCC 2 cut(s) 716, 1377
BisI GCNGC 1 cut(s) 408
BlnI CCTAGG 1 cut(s) 640
BlsI GCNGC 1 cut(s) 409
Bme1390I CCNGG 1 cut(s) 1000
Bme18I GGWCC 2 cut(s) 514, 1384
BmeRI GACNNNNNGTC 2 cut(s) 295, 922
BmgT120I GGNCC 3 cut(s) 514, 1048, 1384
BmiI GGNNCC 7 cut(s) 515, 739, 859, 997, 1033, 1050, 1490
BmrFI CCNGG 1 cut(s) 1000
BmsI GCATC 2 cut(s) 14, 919
BoxI GACNNNNGTC 1 cut(s) 41
BpiI GAAGAC 3 cut(s) 37, 41, 1396
BpmI CTGGAG 1 cut(s) 411
BpuEI CTTGAG 2 cut(s) 539, 1175
BpuMI CCSGG 1 cut(s) 1000
BsaI GGTCTC 1 cut(s) 1238
BsaJI CCNNGG 4 cut(s) 271, 484, 640, 853
BsaWI WCCGGW 1 cut(s) 1141
Bsc4I CCNNNNNNNGG 3 cut(s) 461, 490, 1331
Bse1I ACTGG 2 cut(s) 503, 1135
Bse3DI GCAATG 1 cut(s) 794
BseDI CCNNGG 4 cut(s) 271, 484, 640, 853
BseGI GGATG 1 cut(s) 846
BseLI CCNNNNNNNGG 3 cut(s) 461, 490, 1331
BseMI GCAATG 1 cut(s) 794
BseMII CTCAG 2 cut(s) 291, 1283
BseNI ACTGG 2 cut(s) 503, 1135
BseRI GAGGAG 1 cut(s) 1376
BseSI GKGCMC 1 cut(s) 1267
BseXI GCAGC 1 cut(s) 419
BsgI GTGCAG 2 cut(s) 426, 1272
Bsh1236I CGCG 1 cut(s) 1378
Bsh1285I CGRYCG 1 cut(s) 1156
BshFI GGCC 5 cut(s) 890, 1049, 1071, 1159, 1324
BshNI GGYRCC 3 cut(s) 857, 995, 1031
BsiEI CGRYCG 1 cut(s) 1156
BsiSI CCGG 2 cut(s) 999, 1142
BslFI GGGAC 1 cut(s) 527
BslI CCNNNNNNNGG 3 cut(s) 461, 490, 1331
BsmAI GTCTC 3 cut(s) 909, 1238, 1434
BsmFI GGGAC 1 cut(s) 527
BsnI GGCC 5 cut(s) 890, 1049, 1071, 1159, 1324
Bso31I GGTCTC 1 cut(s) 1238
Bsp1286I GDGCHC 2 cut(s) 1267, 1279
Bsp143I GATC 9 cut(s) 75, 143, 220, 312, 341, 605, 1138, 1231, 1303
BspACI CCGC 4 cut(s) 110, 444, 861, 1376
BspANI GGCC 5 cut(s) 890, 1049, 1071, 1159, 1324
BspCNI CTCAG 2 cut(s) 292, 1284
BspFNI CGCG 1 cut(s) 1378
BspLI GGNNCC 7 cut(s) 515, 739, 859, 997, 1033, 1050, 1490
BspPI GGATC 7 cut(s) 83, 138, 307, 613, 1133, 1226, 1298
BspT107I GGYRCC 3 cut(s) 857, 995, 1031
BspTNI GGTCTC 1 cut(s) 1238
BsrDI GCAATG 1 cut(s) 794
BsrI ACTGG 2 cut(s) 503, 1135
BssECI CCNNGG 4 cut(s) 271, 484, 640, 853
BssMI GATC 9 cut(s) 75, 143, 220, 312, 341, 605, 1138, 1231, 1303
BssT1I CCWWGG 4 cut(s) 271, 484, 640, 853
Bst4CI ACNGT 3 cut(s) 22, 1154, 1493
Bst6I CTCTTC 4 cut(s) 998, 1079, 1129, 1215
BstC8I GCNNGC 4 cut(s) 873, 1161, 1211, 1349
BstDEI CTNAG 4 cut(s) 300, 960, 1292, 1326
BstF5I GGATG 1 cut(s) 846
BstFNI CGCG 1 cut(s) 1378
BstH2I RGCGCY 1 cut(s) 872
BstHHI GCGC 2 cut(s) 177, 871
BstKTI GATC 9 cut(s) 78, 146, 223, 315, 344, 608, 1141, 1234, 1306
BstMAI GTCTC 3 cut(s) 909, 1238, 1434
BstMBI GATC 9 cut(s) 75, 143, 220, 312, 341, 605, 1138, 1231, 1303
BstMCI CGRYCG 1 cut(s) 1156
BstMWI GCNNNNNNNGC 1 cut(s) 172
BstNSI RCATGY 3 cut(s) 166, 692, 1351
BstPAI GACNNNNGTC 1 cut(s) 41
BstSCI CCNGG 1 cut(s) 998
BstSLI GKGCMC 1 cut(s) 1267
BstUI CGCG 1 cut(s) 1378
BstV1I GCAGC 1 cut(s) 419
BstV2I GAAGAC 3 cut(s) 37, 41, 1396
BstX2I RGATCY 4 cut(s) 143, 605, 1138, 1231
BstXI CCANNNNNNTGG 1 cut(s) 323
BstYI RGATCY 4 cut(s) 143, 605, 1138, 1231
BsuI GTATCC 2 cut(s) 716, 1377
BsuRI GGCC 5 cut(s) 890, 1049, 1071, 1159, 1324
BtsCI GGATG 1 cut(s) 846
BtsIMutI CAGTG 5 cut(s) 18, 292, 496, 1128, 1289
Cac8I GCNNGC 4 cut(s) 873, 1161, 1211, 1349
CaiI CAGNNNCTG 1 cut(s) 1313
CfoI GCGC 2 cut(s) 177, 871
Cfr13I GGNCC 3 cut(s) 514, 1048, 1384
CseI GACGC 1 cut(s) 797
Csp6I GTAC 4 cut(s) 245, 418, 692, 1032
CviAII CATG 7 cut(s) 163, 689, 797, 815, 828, 884, 1348
CviQI GTAC 4 cut(s) 245, 418, 692, 1032
DdeI CTNAG 4 cut(s) 300, 960, 1292, 1326
DpnI GATC 9 cut(s) 77, 145, 222, 314, 343, 607, 1140, 1233, 1305
DpnII GATC 9 cut(s) 75, 143, 220, 312, 341, 605, 1138, 1231, 1303
DraI TTTAAA 1 cut(s) 54
DriI GACNNNNNGTC 2 cut(s) 295, 922
EaeI YGGCCR 1 cut(s) 1157
Eam1104I CTCTTC 4 cut(s) 998, 1079, 1129, 1215
Eam1105I GACNNNNNGTC 2 cut(s) 295, 922
EarI CTCTTC 4 cut(s) 998, 1079, 1129, 1215
Eco130I CCWWGG 4 cut(s) 271, 484, 640, 853
Eco147I AGGCCT 1 cut(s) 1324
Eco24I GRGCYC 1 cut(s) 1279
Eco31I GGTCTC 1 cut(s) 1238
Eco32I GATATC 2 cut(s) 821, 966
Eco47I GGWCC 2 cut(s) 514, 1384
Eco47III AGCGCT 1 cut(s) 870
EcoO109I RGGNCCY 1 cut(s) 514
EcoRI GAATTC 3 cut(s) 180, 473, 659
EcoRV GATATC 2 cut(s) 821, 966
EcoT14I CCWWGG 4 cut(s) 271, 484, 640, 853
EcoT38I GRGCYC 1 cut(s) 1279
ErhI CCWWGG 4 cut(s) 271, 484, 640, 853
FaeI CATG 7 cut(s) 166, 692, 800, 818, 831, 887, 1351
FalI AAGNNNNNCTT 2 cut(s) 837, 869
FaqI GGGAC 1 cut(s) 527
FatI CATG 7 cut(s) 162, 688, 796, 814, 827, 883, 1347
FblI GTMKAC 2 cut(s) 155, 466
Fnu4HI GCNGC 1 cut(s) 408
FokI GGATG 1 cut(s) 853
FriOI GRGCYC 1 cut(s) 1279
Fsp4HI GCNGC 1 cut(s) 408
FspBI CTAG 3 cut(s) 641, 992, 1020
FspI TGCGCA 1 cut(s) 176
GlaI GCGC 2 cut(s) 176, 870
GluI GCNGC 1 cut(s) 408
GsuI CTGGAG 1 cut(s) 411
HaeII RGCGCY 1 cut(s) 872
HaeIII GGCC 5 cut(s) 890, 1049, 1071, 1159, 1324
HapII CCGG 2 cut(s) 999, 1142
HgaI GACGC 1 cut(s) 797
HhaI GCGC 2 cut(s) 177, 871
Hin1II CATG 7 cut(s) 166, 692, 800, 818, 831, 887, 1351
Hin6I GCGC 2 cut(s) 175, 869
HinP1I GCGC 2 cut(s) 175, 869
HincII GTYRAC 1 cut(s) 769
HindII GTYRAC 1 cut(s) 769
HindIII AAGCTT 1 cut(s) 225
HinfI GANTC 7 cut(s) 103, 191, 296, 1006, 1310, 1355, 1427
HpaII CCGG 2 cut(s) 999, 1142
HphI GGTGA 3 cut(s) 259, 444, 572
Hpy166II GTNNAC 4 cut(s) 156, 467, 504, 769
Hpy188I TCNGA 9 cut(s) 301, 597, 665, 970, 1219, 1236, 1315, 1360, 1441
Hpy188III TCNNGA 8 cut(s) 14, 135, 147, 390, 914, 1192, 1282, 1307
Hpy8I GTNNAC 4 cut(s) 156, 467, 504, 769
Hpy99I CGWCG 1 cut(s) 1497
HpyAV CCTTC 7 cut(s) 361, 435, 459, 649, 728, 1082, 1479
HpyCH4III ACNGT 3 cut(s) 22, 1154, 1493
HpyCH4V TGCA 6 cut(s) 233, 407, 729, 883, 910, 1289
HpyF10VI GCNNNNNNNGC 1 cut(s) 172
HpyF3I CTNAG 4 cut(s) 300, 960, 1292, 1326
Hsp92II CATG 7 cut(s) 166, 692, 800, 818, 831, 887, 1351
HspAI GCGC 2 cut(s) 175, 869
KpnI GGTACC 1 cut(s) 1035
Kzo9I GATC 9 cut(s) 75, 143, 220, 312, 341, 605, 1138, 1231, 1303
LmnI GCTCC 2 cut(s) 784, 800
Lsp1109I GCAGC 1 cut(s) 419
LweI GCATC 2 cut(s) 14, 919
MaeI CTAG 3 cut(s) 641, 992, 1020
MaeIII GTNAC 2 cut(s) 287, 494
MalI GATC 9 cut(s) 77, 145, 222, 314, 343, 607, 1140, 1233, 1305
MboI GATC 9 cut(s) 75, 143, 220, 312, 341, 605, 1138, 1231, 1303
MflI RGATCY 4 cut(s) 143, 605, 1138, 1231
MhlI GDGCHC 2 cut(s) 1267, 1279
MluCI AATT 8 cut(s) 120, 180, 281, 473, 659, 778, 1174, 1435
MlyI GAGTC 3 cut(s) 305, 1015, 1436
MmeI TCCRAC 1 cut(s) 1183
MroXI GAANNNNTTC 1 cut(s) 659
MseI TTAA 8 cut(s) 26, 53, 68, 354, 509, 600, 921, 1269
MslI CAYNNNNRTG 1 cut(s) 321
MspI CCGG 2 cut(s) 999, 1142
MspR9I CCNGG 1 cut(s) 1000
MvnI CGCG 1 cut(s) 1378
MwoI GCNNNNNNNGC 1 cut(s) 172
NciI CCSGG 1 cut(s) 1000
NdeII GATC 9 cut(s) 75, 143, 220, 312, 341, 605, 1138, 1231, 1303
NlaIII CATG 7 cut(s) 166, 692, 800, 818, 831, 887, 1351
NlaIV GGNNCC 7 cut(s) 515, 739, 859, 997, 1033, 1050, 1490
NmeAIII GCCGAG 1 cut(s) 1450
NmuCI GTSAC 2 cut(s) 287, 494
NsbI TGCGCA 1 cut(s) 176
NspI RCATGY 3 cut(s) 166, 692, 1351
PaeI GCATGC 1 cut(s) 1351
PceI AGGCCT 1 cut(s) 1324
PdmI GAANNNNTTC 1 cut(s) 659
PfeI GAWTC 4 cut(s) 103, 191, 1310, 1355
PkrI GCNGC 1 cut(s) 409
PleI GAGTC 3 cut(s) 304, 1014, 1435
PpsI GAGTC 3 cut(s) 304, 1014, 1435
PpuMI RGGWCCY 1 cut(s) 514
PshAI GACNNNNGTC 1 cut(s) 41
PshBI ATTAAT 1 cut(s) 600
Psp5II RGGWCCY 1 cut(s) 514
PspN4I GGNNCC 7 cut(s) 515, 739, 859, 997, 1033, 1050, 1490
PspPI GGNCC 3 cut(s) 514, 1048, 1384
PspPPI RGGWCCY 1 cut(s) 514
PstNI CAGNNNCTG 1 cut(s) 1313
PsuI RGATCY 4 cut(s) 143, 605, 1138, 1231
RsaI GTAC 4 cut(s) 246, 419, 693, 1033
RsaNI GTAC 4 cut(s) 245, 418, 692, 1032
RseI CAYNNNNRTG 1 cut(s) 321
SaqAI TTAA 8 cut(s) 26, 53, 68, 354, 509, 600, 921, 1269
SatI GCNGC 1 cut(s) 408
Sau3AI GATC 9 cut(s) 75, 143, 220, 312, 341, 605, 1138, 1231, 1303
Sau96I GGNCC 3 cut(s) 514, 1048, 1384
SchI GAGTC 3 cut(s) 305, 1015, 1436
ScrFI CCNGG 1 cut(s) 1000
SduI GDGCHC 2 cut(s) 1267, 1279
SfaNI GCATC 2 cut(s) 14, 919
SinI GGWCC 2 cut(s) 514, 1384
SmiMI CAYNNNNRTG 1 cut(s) 321
SmlI CTYRAG 2 cut(s) 518, 1190
SmoI CTYRAG 2 cut(s) 518, 1190
SphI GCATGC 1 cut(s) 1351
Sse9I AATT 8 cut(s) 120, 180, 281, 473, 659, 778, 1174, 1435
SseBI AGGCCT 1 cut(s) 1324
SsiI CCGC 4 cut(s) 110, 444, 861, 1376
SspMI CTAG 3 cut(s) 641, 992, 1020
StuI AGGCCT 1 cut(s) 1324
StyD4I CCNGG 1 cut(s) 998
StyI CCWWGG 4 cut(s) 271, 484, 640, 853
TaaI ACNGT 3 cut(s) 22, 1154, 1493
TaqI TCGA 6 cut(s) 340, 712, 913, 926, 1302, 1495
TaqII GACCGA 1 cut(s) 1401
TasI AATT 8 cut(s) 120, 180, 281, 473, 659, 778, 1174, 1435
TfiI GAWTC 4 cut(s) 103, 191, 1310, 1355
Tru1I TTAA 8 cut(s) 26, 53, 68, 354, 509, 600, 921, 1269
Tru9I TTAA 8 cut(s) 26, 53, 68, 354, 509, 600, 921, 1269
TscAI CASTG 5 cut(s) 25, 292, 503, 1135, 1296
TseFI GTSAC 2 cut(s) 287, 494
TseI GCWGC 1 cut(s) 407
Tsp45I GTSAC 2 cut(s) 287, 494
TspDTI ATGAA 3 cut(s) 774, 785, 857
TspGWI ACGGA 2 cut(s) 789, 853
TspRI CASTG 5 cut(s) 25, 292, 503, 1135, 1296
VpaK11BI GGWCC 2 cut(s) 514, 1384
VspI ATTAAT 1 cut(s) 600
XapI RAATTY 7 cut(s) 180, 281, 473, 659, 778, 1174, 1435
XceI RCATGY 3 cut(s) 166, 692, 1351
XmaJI CCTAGG 1 cut(s) 640
XmiI GTMKAC 2 cut(s) 155, 466
XmnI GAANNNNTTC 1 cut(s) 659
XspI CTAG 3 cut(s) 641, 992, 1020
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.