RH4DG276600

receptor-like protein kinase

Basic Information

Type: Sequence Only
Biological Identity
rosa_samantha
Unknown
Physical Location & Seq
Reverse (-)
0 .. 0
1 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4DG276600.1

Sequence Viewer

Length: 1512 bp
ATGGCATCCGATCTTAATACTGAATTAGCCAAGAAGACATTTGTTTTTGGCTTAAAAGTTTGGGTATTAACAGGGATCCTTGTGGGAGTTTTTATTGTGACGATTCTACTGGTGCTATCAATTTGTCTTACTTCGCGAAAGAAATCCAGAAAGTCAAATGACATGCTTCCTCTTAACCAAATTCCAAATGTTTCAAGGGAAATTAAAGAGATTAGGGTTGATCAAGCTTCAGCGAATAACCGTATACCCCGTGGTTCTCTCCTGACCCTTAATGAGAAATTCAGTGACAGAGAATCAGAGAAAGTTTTGATTCATAAAAATGGAGATAGTAGCAGTCGATCAGGCTCATTTAATAATGCAGAGAAGGAAAATGTTGGCTCTCAATCTGGAGACGAGGGTGGTGCCGGGTCAGCTTATACACAGAAGCCATCTTCACATCCTATAACTGCCCCTTCACCTCTTTGTGGTCTACCGGAATTCTCTCACCTTGGTTGGGGTCACTGGTTTACATTACGGGATCTTGAATTTGCAACAAACCGGTTTTCAAAGGAAAATGTCATTGGTGAGGGTGGATATGGAGTTGTTTATCGCGGTAATCTGATTAATGGAACTCCTGTGGCTGTGAAGAAGCTACTCAACAACCTAGGACAAGCAGAGAAGGAATTTAGAGTGGAAGTTGAGGCTATTGGGCATGTACGACACAAAAACTTGGTTCGTCTTCTAGGATACTGCATCGAAGGCACCCATAGGATGCTGGTTTATGAGTATGTCAACAATGGAAATCTGGAGCAATGGCTTCATGGAGCTATGCGACATCATGGATATCTAACATGGGAGGCGCGCATGAAAGTGCTCCTTGGCACTGCTAAAGCGCTGGCTTATTTGCATGAGGCCATCGAGCCAAAAGTAGTGCATCGAGATATCAAGTCGAGTAATATCTTGCTTGATGATGACTTCAATGCTAAAATATCGGACTTTGGTCTGGCAAAGATGCTAATGGCTGGAAAGAGCCATATTACGACTAGAGTTATGGGAACCTTTGGATATGTAGCACCCGAATATGCCAATTCTGGCCTTTTAAACGAGAAGAGTGATGTTTATAGCTTTGGCGTTGTGATTTTGGAAGCAATTACTGGAAGAGACCCAGTGGACTATGGTCGGCAAGCACAAGAGGTAAATTTGGTAGACTGGCTCAAGATGATGGTTGGAAGTCGGCGTTCAGAGGAGGTGGTGGATCCAAACATTGAGACCAGACCATCGACAAGCGCCCTTAAACGAGCCCTCTTGACTGCGTTGAGGTGTGTAGATCCTGATTCTGATAAAAGACCAAAGATGGGTCAAGTTGTTCGCATGCTTGAATCTGAGGAATATCCTGTACTTCGAGAGGATCGAAGACGCCGAAAAAGTCAAGCAGGCAATGTGGAGGGCGAGTCTCAGAAAGACAATTCTGATACAGATAGGAGTGACAATCCAGATACAAGGACCAACAACAGAAGGAACAATCGAACATAG

Protein Analysis

503

Amino Acids

56.24

Weight (kDa)

9.0

Isoelectric Point (pI)

38.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 182 - 449 2.2e-47 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 184 - 452 1.2e-45 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 401, 740
AccI GTMKAC 3 cut(s) 244, 469, 1185
AccII CGCG 3 cut(s) 136, 591, 841
AciI CCGC 1 cut(s) 591
AclWI GGATC 7 cut(s) 70, 83, 525, 1229, 1242, 1301, 1395
AcsI RAATTY 6 cut(s) 180, 278, 476, 524, 662, 1177
AcuI CTGAAG 1 cut(s) 213
AcyI GRCGYC 1 cut(s) 1396
AfaI GTAC 2 cut(s) 696, 1377
AfeI AGCGCT 1 cut(s) 873
AfiI CCNNNNNNNGG 3 cut(s) 464, 493, 1334
AgeI ACCGGT 1 cut(s) 537
AgsI TTSAA 5 cut(s) 195, 524, 546, 958, 1358
AjuI GAANNNNNNNTTGG 2 cut(s) 543, 575
AluBI AGCT 5 cut(s) 227, 413, 631, 806, 1104
AluI AGCT 5 cut(s) 227, 413, 631, 806, 1104
Alw21I GWGCWC 1 cut(s) 855
Alw26I GTCTC 4 cut(s) 384, 1134, 1241, 1437
AlwI GGATC 7 cut(s) 70, 83, 525, 1229, 1242, 1301, 1395
Aor51HI AGCGCT 1 cut(s) 873
AoxI GGCC 2 cut(s) 891, 1072
ApoI RAATTY 6 cut(s) 180, 278, 476, 524, 662, 1177
AseI ATTAAT 1 cut(s) 603
AsiGI ACCGGT 1 cut(s) 537
AspA2I CCTAGG 1 cut(s) 643
AspLEI GCGC 4 cut(s) 841, 843, 874, 1268
AspS9I GGNCC 1 cut(s) 1482
AsuC2I CCSGG 1 cut(s) 406
AsuHPI GGTGA 3 cut(s) 447, 476, 575
AvaII GGWCC 1 cut(s) 1482
AvrII CCTAGG 1 cut(s) 643
BamHI GGATCC 2 cut(s) 75, 1234
BanI GGYRCC 2 cut(s) 401, 740
BanII GRGCYC 1 cut(s) 1282
BbsI GAAGAC 3 cut(s) 41, 710, 1399
Bbv12I GWGCWC 1 cut(s) 855
BccI CCATC 5 cut(s) 436, 902, 1195, 1264, 1327
BcgI CGANNNNNNTGC 2 cut(s) 383, 417
BciVI GTATCC 1 cut(s) 719
BclI TGATCA 1 cut(s) 220
BcnI CCSGG 1 cut(s) 406
BcoDI GTCTC 4 cut(s) 384, 1134, 1241, 1437
BfaI CTAG 3 cut(s) 644, 722, 1023
BfoI RGCGCY 2 cut(s) 875, 1269
BfuI GTATCC 1 cut(s) 719
BlnI CCTAGG 1 cut(s) 643
Bme1390I CCNGG 1 cut(s) 406
Bme18I GGWCC 1 cut(s) 1482
BmgT120I GGNCC 1 cut(s) 1482
BmiI GGNNCC 5 cut(s) 77, 403, 742, 1036, 1236
BmrFI CCNGG 1 cut(s) 406
BmrI ACTGGG 1 cut(s) 1139
BmsI GCATC 5 cut(s) 14, 741, 741, 922, 981
BmuI ACTGGG 1 cut(s) 1139
BoxI GACNNNNGTC 2 cut(s) 978, 1155
BpiI GAAGAC 3 cut(s) 41, 710, 1399
BpmI CTGGAG 2 cut(s) 408, 806
BpuEI CTTGAG 1 cut(s) 1178
BpuMI CCSGG 1 cut(s) 406
BsaHI GRCGYC 1 cut(s) 1396
BsaI GGTCTC 2 cut(s) 1134, 1241
BsaJI CCNNGG 4 cut(s) 250, 487, 643, 856
BsaWI WCCGGW 2 cut(s) 472, 537
BsaXI ACNNNNNCTCC 2 cut(s) 1415, 1445
Bsc4I CCNNNNNNNGG 3 cut(s) 464, 493, 1334
Bse118I RCCGGY 1 cut(s) 537
Bse1I ACTGG 5 cut(s) 114, 506, 1138, 1145, 1193
Bse3DI GCAATG 2 cut(s) 797, 1423
BseDI CCNNGG 4 cut(s) 250, 487, 643, 856
BseGI GGATG 3 cut(s) 5, 436, 756
BseLI CCNNNNNNNGG 3 cut(s) 464, 493, 1334
BseMI GCAATG 2 cut(s) 797, 1423
BseMII CTCAG 2 cut(s) 1353, 1448
BseNI ACTGG 5 cut(s) 114, 506, 1138, 1145, 1193
BsePI GCGCGC 1 cut(s) 839
BseRI GAGGAG 1 cut(s) 1238
Bsh1236I CGCG 3 cut(s) 136, 591, 841
BshFI GGCC 2 cut(s) 893, 1074
BshNI GGYRCC 2 cut(s) 401, 740
BshTI ACCGGT 1 cut(s) 537
BsiHKAI GWGCWC 1 cut(s) 855
BsiSI CCGG 3 cut(s) 405, 473, 538
BslI CCNNNNNNNGG 3 cut(s) 464, 493, 1334
BsmAI GTCTC 4 cut(s) 384, 1134, 1241, 1437
BsmBI CGTCTC 1 cut(s) 384
BsnI GGCC 2 cut(s) 893, 1074
Bso31I GGTCTC 2 cut(s) 1134, 1241
Bsp1286I GDGCHC 2 cut(s) 855, 1282
Bsp143I GATC 8 cut(s) 10, 75, 220, 338, 517, 1234, 1306, 1387
Bsp68I TCGCGA 1 cut(s) 136
BspACI CCGC 1 cut(s) 591
BspANI GGCC 2 cut(s) 893, 1074
BspCNI CTCAG 2 cut(s) 1354, 1447
BspFNI CGCG 3 cut(s) 136, 591, 841
BspLI GGNNCC 5 cut(s) 77, 403, 742, 1036, 1236
BspPI GGATC 7 cut(s) 70, 83, 525, 1229, 1242, 1301, 1395
BspT107I GGYRCC 2 cut(s) 401, 740
BspTNI GGTCTC 2 cut(s) 1134, 1241
BsrDI GCAATG 2 cut(s) 797, 1423
BsrFI RCCGGY 1 cut(s) 537
BsrI ACTGG 5 cut(s) 114, 506, 1138, 1145, 1193
BssAI RCCGGY 1 cut(s) 537
BssECI CCNNGG 4 cut(s) 250, 487, 643, 856
BssHII GCGCGC 1 cut(s) 839
BssMI GATC 8 cut(s) 10, 75, 220, 338, 517, 1234, 1306, 1387
BssNAI GTATAC 1 cut(s) 245
BssNI GRCGYC 1 cut(s) 1396
BssT1I CCWWGG 3 cut(s) 487, 643, 856
Bst1107I GTATAC 1 cut(s) 245
Bst4CI ACNGT 1 cut(s) 242
Bst6I CTCTTC 2 cut(s) 1082, 1132
BstACI GRCGYC 1 cut(s) 1396
BstC8I GCNNGC 5 cut(s) 841, 876, 1164, 1352, 1414
BstDEI CTNAG 2 cut(s) 1362, 1434
BstDSI CCRYGG 1 cut(s) 250
BstF5I GGATG 3 cut(s) 5, 436, 756
BstFNI CGCG 3 cut(s) 136, 591, 841
BstH2I RGCGCY 2 cut(s) 875, 1269
BstHHI GCGC 4 cut(s) 841, 843, 874, 1268
BstKTI GATC 8 cut(s) 13, 78, 223, 341, 520, 1237, 1309, 1390
BstMAI GTCTC 4 cut(s) 384, 1134, 1241, 1437
BstMBI GATC 8 cut(s) 10, 75, 220, 338, 517, 1234, 1306, 1387
BstMWI GCNNNNNNNGC 2 cut(s) 410, 738
BstNSI RCATGY 3 cut(s) 166, 695, 1354
BstPAI GACNNNNGTC 2 cut(s) 978, 1155
BstSCI CCNGG 1 cut(s) 404
BstUI CGCG 3 cut(s) 136, 591, 841
BstV2I GAAGAC 3 cut(s) 41, 710, 1399
BstX2I RGATCY 4 cut(s) 75, 517, 1234, 1306
BstYI RGATCY 4 cut(s) 75, 517, 1234, 1306
BstZ17I GTATAC 1 cut(s) 245
BsuI GTATCC 1 cut(s) 719
BsuRI GGCC 2 cut(s) 893, 1074
BtgI CCRYGG 1 cut(s) 250
BtsCI GGATG 3 cut(s) 5, 436, 756
BtsI GCAGTG 1 cut(s) 861
BtsIMutI CAGTG 4 cut(s) 289, 499, 861, 1152
BtuMI TCGCGA 1 cut(s) 136
Cac8I GCNNGC 5 cut(s) 841, 876, 1164, 1352, 1414
CfoI GCGC 4 cut(s) 841, 843, 874, 1268
Cfr10I RCCGGY 1 cut(s) 537
Cfr13I GGNCC 1 cut(s) 1482
CseI GACGC 1 cut(s) 1404
Csp6I GTAC 2 cut(s) 695, 1376
CspAI ACCGGT 1 cut(s) 537
CviAII CATG 8 cut(s) 163, 692, 800, 818, 831, 844, 887, 1351
CviQI GTAC 2 cut(s) 695, 1376
DdeI CTNAG 2 cut(s) 1362, 1434
DpnI GATC 8 cut(s) 12, 77, 222, 340, 519, 1236, 1308, 1389
DpnII GATC 8 cut(s) 10, 75, 220, 338, 517, 1234, 1306, 1387
DraI TTTAAA 1 cut(s) 1080
Eam1104I CTCTTC 2 cut(s) 1082, 1132
EarI CTCTTC 2 cut(s) 1082, 1132
Eco130I CCWWGG 3 cut(s) 487, 643, 856
Eco24I GRGCYC 1 cut(s) 1282
Eco31I GGTCTC 2 cut(s) 1134, 1241
Eco32I GATATC 2 cut(s) 824, 922
Eco47I GGWCC 1 cut(s) 1482
Eco47III AGCGCT 1 cut(s) 873
Eco57I CTGAAG 1 cut(s) 213
EcoRI GAATTC 1 cut(s) 476
EcoRV GATATC 2 cut(s) 824, 922
EcoT14I CCWWGG 3 cut(s) 487, 643, 856
EcoT38I GRGCYC 1 cut(s) 1282
ErhI CCWWGG 3 cut(s) 487, 643, 856
Esp3I CGTCTC 1 cut(s) 384
FaeI CATG 8 cut(s) 166, 695, 803, 821, 834, 847, 890, 1354
FalI AAGNNNNNCTT 2 cut(s) 840, 872
FatI CATG 8 cut(s) 162, 691, 799, 817, 830, 843, 886, 1350
FbaI TGATCA 1 cut(s) 220
FblI GTMKAC 3 cut(s) 244, 469, 1185
FokI GGATG 2 cut(s) 423, 763
FriOI GRGCYC 1 cut(s) 1282
FspBI CTAG 3 cut(s) 644, 722, 1023
GlaI GCGC 4 cut(s) 840, 842, 873, 1267
GsuI CTGGAG 2 cut(s) 408, 806
HaeII RGCGCY 2 cut(s) 875, 1269
HaeIII GGCC 2 cut(s) 893, 1074
HapII CCGG 3 cut(s) 405, 473, 538
HgaI GACGC 1 cut(s) 1404
HhaI GCGC 4 cut(s) 841, 843, 874, 1268
Hin1I GRCGYC 1 cut(s) 1396
Hin1II CATG 8 cut(s) 166, 695, 803, 821, 834, 847, 890, 1354
Hin6I GCGC 4 cut(s) 839, 841, 872, 1266
HinP1I GCGC 4 cut(s) 839, 841, 872, 1266
HincII GTYRAC 1 cut(s) 772
HindII GTYRAC 1 cut(s) 772
HindIII AAGCTT 1 cut(s) 225
HinfI GANTC 6 cut(s) 103, 293, 310, 1313, 1358, 1430
HpaII CCGG 3 cut(s) 405, 473, 538
HphI GGTGA 3 cut(s) 447, 476, 575
Hpy166II GTNNAC 6 cut(s) 245, 470, 507, 772, 1150, 1186
Hpy188I TCNGA 9 cut(s) 10, 298, 600, 973, 1222, 1318, 1363, 1437, 1450
Hpy8I GTNNAC 6 cut(s) 245, 470, 507, 772, 1150, 1186
HpyAV CCTTC 5 cut(s) 358, 462, 652, 731, 1488
HpyCH4III ACNGT 1 cut(s) 242
HpyCH4V TGCA 5 cut(s) 359, 530, 732, 886, 913
HpyF10VI GCNNNNNNNGC 2 cut(s) 410, 738
HpyF3I CTNAG 2 cut(s) 1362, 1434
Hsp92I GRCGYC 1 cut(s) 1396
Hsp92II CATG 8 cut(s) 166, 695, 803, 821, 834, 847, 890, 1354
HspAI GCGC 4 cut(s) 839, 841, 872, 1266
Ksp22I TGATCA 1 cut(s) 220
Kzo9I GATC 8 cut(s) 10, 75, 220, 338, 517, 1234, 1306, 1387
LmnI GCTCC 3 cut(s) 787, 803, 858
LweI GCATC 5 cut(s) 14, 741, 741, 922, 981
MaeI CTAG 3 cut(s) 644, 722, 1023
MaeIII GTNAC 4 cut(s) 97, 284, 497, 1463
MalI GATC 8 cut(s) 12, 77, 222, 340, 519, 1236, 1308, 1389
MboI GATC 8 cut(s) 10, 75, 220, 338, 517, 1234, 1306, 1387
MboII GAAGA 7 cut(s) 46, 423, 637, 710, 1099, 1149, 1404
MflI RGATCY 4 cut(s) 75, 517, 1234, 1306
MhlI GDGCHC 2 cut(s) 855, 1282
MlyI GAGTC 1 cut(s) 1439
MmeI TCCRAC 1 cut(s) 1186
MslI CAYNNNNRTG 2 cut(s) 318, 848
MspI CCGG 3 cut(s) 405, 473, 538
MspR9I CCNGG 1 cut(s) 406
MvnI CGCG 3 cut(s) 136, 591, 841
MwoI GCNNNNNNNGC 2 cut(s) 410, 738
NciI CCSGG 1 cut(s) 406
NdeII GATC 8 cut(s) 10, 75, 220, 338, 517, 1234, 1306, 1387
NlaIII CATG 8 cut(s) 166, 695, 803, 821, 834, 847, 890, 1354
NlaIV GGNNCC 5 cut(s) 77, 403, 742, 1036, 1236
NmuCI GTSAC 4 cut(s) 97, 284, 497, 1463
NruI TCGCGA 1 cut(s) 136
NspI RCATGY 3 cut(s) 166, 695, 1354
PaeI GCATGC 1 cut(s) 1354
PauI GCGCGC 1 cut(s) 839
PcsI WCGNNNNNNNCGW 2 cut(s) 1387, 1396
PfeI GAWTC 5 cut(s) 103, 293, 310, 1313, 1358
PinAI ACCGGT 1 cut(s) 537
PleI GAGTC 1 cut(s) 1438
PpsI GAGTC 1 cut(s) 1438
PshAI GACNNNNGTC 2 cut(s) 978, 1155
PshBI ATTAAT 1 cut(s) 603
PspN4I GGNNCC 5 cut(s) 77, 403, 742, 1036, 1236
PspPI GGNCC 1 cut(s) 1482
PsuI RGATCY 4 cut(s) 75, 517, 1234, 1306
PteI GCGCGC 1 cut(s) 839
RruI TCGCGA 1 cut(s) 136
RsaI GTAC 2 cut(s) 696, 1377
RsaNI GTAC 2 cut(s) 695, 1376
RseI CAYNNNNRTG 2 cut(s) 318, 848
Sau3AI GATC 8 cut(s) 10, 75, 220, 338, 517, 1234, 1306, 1387
Sau96I GGNCC 1 cut(s) 1482
SchI GAGTC 1 cut(s) 1439
ScrFI CCNGG 1 cut(s) 406
SduI GDGCHC 2 cut(s) 855, 1282
SfaNI GCATC 5 cut(s) 14, 741, 741, 922, 981
SinI GGWCC 1 cut(s) 1482
SmiMI CAYNNNNRTG 2 cut(s) 318, 848
SmlI CTYRAG 1 cut(s) 1193
SmoI CTYRAG 1 cut(s) 1193
SphI GCATGC 1 cut(s) 1354
SsiI CCGC 1 cut(s) 591
SspMI CTAG 3 cut(s) 644, 722, 1023
StyD4I CCNGG 1 cut(s) 404
StyI CCWWGG 3 cut(s) 487, 643, 856
TaaI ACNGT 1 cut(s) 242
TaqI TCGA 9 cut(s) 337, 735, 897, 916, 929, 1259, 1381, 1390, 1504
TatI WGTACW 1 cut(s) 1375
TfiI GAWTC 5 cut(s) 103, 293, 310, 1313, 1358
TscAI CASTG 4 cut(s) 289, 506, 868, 1152
TseFI GTSAC 4 cut(s) 97, 284, 497, 1463
Tsp45I GTSAC 4 cut(s) 97, 284, 497, 1463
TspDTI ATGAA 3 cut(s) 302, 788, 860
TspRI CASTG 4 cut(s) 289, 506, 868, 1152
VpaK11BI GGWCC 1 cut(s) 1482
VspI ATTAAT 1 cut(s) 603
XapI RAATTY 6 cut(s) 180, 278, 476, 524, 662, 1177
XceI RCATGY 3 cut(s) 166, 695, 1354
XmaJI CCTAGG 1 cut(s) 643
XmiI GTMKAC 3 cut(s) 244, 469, 1185
XspI CTAG 3 cut(s) 644, 722, 1023
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.