Rmu_sc0007338.1_g000007

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007338.1
Physical Location & Seq
Reverse (-)
32722 .. 41610
8889 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007338.1_g000007.1.cds

Sequence Viewer

Length: 1878 bp
atgggggtccatggcagcggcgaggctctgggttggtggatgggttgtcggctccggggctccggcggtgctctctttcgccaccatccttgcgtgttgggctgtggctgtcctgatctagatgcgatggtgctgatcctggaggggacctggcggggttgcggcgaagggtttcaacgtgatgctgttttgatgcgtgacgatggcctggtggcattggcgttgttgatggtccgtggatctgttggctgtgcttggccgtggctgggagtggtggtctttgggctgagcctgattcttgggtctctctactcattacacagaggcatcttggcatctgatagaatggcctctgatctcaaagcagagttatccaaggaagctttttttgggctgaaggtctgggaagtgattggcatagctgttgcgttgtttatcataataatccttactgtcctatcactgtgcctcacttcgcgtaagaaatcaagaaaagctggggccaagattccccatagtcaaatcccaactgtctcaaaagaaattaaggaagttcgagtggagcaaataactgccagtgaatttgttccccgtgatggaattcttcttaccattcatgacaaatccagtgacagagaatccgataaggttatggtccatctgggtatgggaaaatcaaagaatggagacaatagtagtcagtcaggttcatttaatcatttagacaaagatggtggagggtctcaatctggagaagaagggagttctgccacgggtacagtgtataagccttcttcatcgtatcccgtaactgctccatctcctctagttggtctgcctgaattctcgcacttgggttggggccactggtttacattaagggaccttgagcttgcaacaaacaggttttcaaaggaaaatgtccttggcgagggtggatatggagttgtttaccggggaaatctcatcaatgggactcctgtcgcagttaaaaagatcctaaacaaccttggccaagcagagaaagaatttagagtggaagttgaagcaattggccatgtgcgccacaagaatttggttcgtctcttgggatactgcgtcgaagggactcacaggatgttggtctatgagtatgtcaacaatggaaacttggagcagtggcttcatggggctatgcgtcaccatggatatctcacttgggaagcccgtataaaggttctccttggaacagcaaaagctcttggttatttacacgaggccattgaaccaaaagtgatacatcgagacattaaatcaagcaatatattgattgatgacgagttcaattccaaggtatctgattttggcctggccaagctgctgggtgcggggacaagtcacgtgacaactcgtgttatgggaacctttggatacgtggcccctgaatatgctaattctggacttttgaatgaaaagagtgacgtgtatagctttggggttttgctcttagaagccatcactggaagagatcctgtagactatggtcgccctgctcctgaggtaaatctggttgattggcttaaaatgatggttggcagcagaagatcagaagaagtggtggacccaaacattgaagtcagaccatcaacaagagccttaaaacgagcactcttgactgctttgaggtgtgttgatccagattctgaaaaacggcccaagatgagccaagttgtccgtatgctcgagtccgaagagtatcctataccaagagaggatcgaaggaaccgtaggactcaagcaggtagcatggagatcgactcccaaaaggaaaattcagatactgatcggagtgattatcctgtttcaagatcagagagtagagactaccaacagcgataa

Protein Analysis

625

Amino Acids

68.93

Weight (kDa)

7.65

Isoelectric Point (pI)

34.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1769
AccI GTMKAC 1 cut(s) 1515
AccII CGCG 1 cut(s) 478
AciI CCGC 5 cut(s) 18, 66, 154, 162, 1367
AclWI GGATC 6 cut(s) 130, 247, 991, 1502, 1667, 1761
AcoI YGGCCR 4 cut(s) 257, 1012, 1054, 1350
AcsI RAATTY 6 cut(s) 581, 600, 842, 1028, 1072, 1810
AcuI CTGAAG 1 cut(s) 416
AcvI CACGTG 1 cut(s) 1381
AfaI GTAC 1 cut(s) 778
AfiI CCNNNNNNNGG 5 cut(s) 266, 596, 830, 931, 1213
AflIII ACRYGT 1 cut(s) 1461
AgsI TTSAA 8 cut(s) 176, 912, 1046, 1265, 1324, 1447, 1613, 1845
AjiI CACGTC 1 cut(s) 1462
AjnI CCWGG 4 cut(s) 138, 149, 207, 1347
AjuI GAANNNNNNNTTGG 4 cut(s) 372, 404, 909, 941
AluBI AGCT 7 cut(s) 383, 422, 497, 892, 1238, 1357, 1470
AluI AGCT 7 cut(s) 383, 422, 497, 892, 1238, 1357, 1470
Alw21I GWGCWC 2 cut(s) 73, 1648
Alw26I GTCTC 7 cut(s) 309, 538, 681, 747, 1088, 1278, 1854
AlwI GGATC 6 cut(s) 130, 247, 991, 1502, 1667, 1761
AlwNI CAGNNNCTG 2 cut(s) 1682, 1820
Ama87I CYCGRG 1 cut(s) 1721
ApeKI GCWGC 3 cut(s) 15, 1357, 1575
ApoI RAATTY 6 cut(s) 581, 600, 842, 1028, 1072, 1810
Asp700I GAANNNNTTC 2 cut(s) 171, 585
AspLEI GCGC 1 cut(s) 1065
AsuC2I CCSGG 2 cut(s) 56, 956
AsuHPI GGTGA 1 cut(s) 1172
AvaI CYCGRG 1 cut(s) 1721
AvaII GGWCC 6 cut(s) 7, 147, 232, 655, 883, 1600
AxyI CCTNAGG 1 cut(s) 1536
BalI TGGCCA 3 cut(s) 1014, 1056, 1352
BanII GRGCYC 1 cut(s) 62
BauI CACGAG 2 cut(s) 1253, 1389
BbrPI CACGTG 1 cut(s) 1381
Bbv12I GWGCWC 2 cut(s) 73, 1648
BbvI GCAGC 3 cut(s) 27, 1344, 1587
BceAI ACGGC 2 cut(s) 244, 1706
BcgI CGANNNNNNTGC 2 cut(s) 1774, 1808
BciT130I CCWGG 4 cut(s) 140, 151, 209, 1349
BciVI GTATCC 4 cut(s) 813, 1085, 1403, 1746
BcnI CCSGG 2 cut(s) 56, 956
BcoDI GTCTC 7 cut(s) 309, 538, 681, 747, 1088, 1278, 1854
BfaI CTAG 2 cut(s) 119, 827
BfmI CTRYAG 1 cut(s) 1512
BfuAI ACCTGC 1 cut(s) 1769
BfuI GTATCC 4 cut(s) 813, 1085, 1403, 1746
BisI GCNGC 5 cut(s) 16, 19, 163, 1358, 1576
BlpI GCTNAGC 1 cut(s) 287
BlsI GCNGC 5 cut(s) 17, 20, 164, 1359, 1577
Bme1390I CCNGG 6 cut(s) 56, 140, 151, 209, 956, 1349
Bme18I GGWCC 6 cut(s) 7, 147, 232, 655, 883, 1600
BmeT110I CYCGRG 1 cut(s) 1721
BmgBI CACGTC 1 cut(s) 1462
BmrFI CCNGG 6 cut(s) 56, 140, 151, 209, 956, 1349
BmsI GCATC 5 cut(s) 112, 172, 183, 336, 344
BoxI GACNNNNGTC 2 cut(s) 980, 1521
BplI GAGNNNNNCTC 2 cut(s) 1781, 1813
BpmI CTGGAG 2 cut(s) 161, 771
Bpu1102I GCTNAGC 1 cut(s) 287
BpuEI CTTGAG 2 cut(s) 908, 1758
BpuMI CCSGG 2 cut(s) 56, 956
BsaAI YACGTR 2 cut(s) 1381, 1414
BsaBI GATNNNNATC 1 cut(s) 1821
BsaI GGTCTC 2 cut(s) 309, 747
BsaXI ACNNNNNCTCC 2 cut(s) 261, 291
Bsc4I CCNNNNNNNGG 5 cut(s) 266, 596, 830, 931, 1213
Bse1I ACTGG 4 cut(s) 576, 627, 872, 1504
Bse21I CCTNAGG 1 cut(s) 1536
Bse8I GATNNNNATC 1 cut(s) 1821
BseBI CCWGG 4 cut(s) 140, 151, 209, 1349
BseGI GGATG 3 cut(s) 45, 85, 1122
BseJI GATNNNNATC 1 cut(s) 1821
BseLI CCNNNNNNNGG 5 cut(s) 266, 596, 830, 931, 1213
BseMII CTCAG 2 cut(s) 278, 1527
BseNI ACTGG 4 cut(s) 576, 627, 872, 1504
BseRI GAGGAG 1 cut(s) 813
BseXI GCAGC 3 cut(s) 27, 1344, 1587
BseYI CCCAGC 3 cut(s) 265, 497, 1360
Bsh1236I CGCG 1 cut(s) 478
BsiHKAI GWGCWC 2 cut(s) 73, 1648
BsiHKCI CYCGRG 1 cut(s) 1721
BsiSI CCGG 3 cut(s) 55, 63, 955
BslFI GGGAC 5 cut(s) 160, 896, 988, 1120, 1384
BslI CCNNNNNNNGG 5 cut(s) 266, 596, 830, 931, 1213
BsmAI GTCTC 7 cut(s) 309, 538, 681, 747, 1088, 1278, 1854
BsmBI CGTCTC 1 cut(s) 1088
BsmFI GGGAC 5 cut(s) 160, 896, 988, 1120, 1384
Bso31I GGTCTC 2 cut(s) 309, 747
BsoBI CYCGRG 1 cut(s) 1721
Bsp1286I GDGCHC 3 cut(s) 62, 73, 1648
Bsp1720I GCTNAGC 1 cut(s) 287
Bsp19I CCATGG 2 cut(s) 10, 1183
BspACI CCGC 5 cut(s) 18, 66, 154, 162, 1367
BspCNI CTCAG 2 cut(s) 279, 1528
BspFNI CGCG 1 cut(s) 478
BspHI TCATGA 1 cut(s) 616
BspMI ACCTGC 1 cut(s) 1769
BspPI GGATC 6 cut(s) 130, 247, 991, 1502, 1667, 1761
BspTNI GGTCTC 2 cut(s) 309, 747
BsrI ACTGG 4 cut(s) 576, 627, 872, 1504
BssSI CACGAG 2 cut(s) 1253, 1389
BssT1I CCWWGG 7 cut(s) 10, 375, 925, 1009, 1183, 1222, 1329
Bst2BI CACGAG 2 cut(s) 1253, 1389
Bst2UI CCWGG 4 cut(s) 140, 151, 209, 1349
Bst4CI ACNGT 5 cut(s) 454, 465, 532, 781, 1766
Bst6I CTCTTC 2 cut(s) 1498, 1725
BstBAI YACGTR 2 cut(s) 1381, 1414
BstC8I GCNNGC 1 cut(s) 894
BstDEI CTNAG 3 cut(s) 287, 1486, 1536
BstDSI CCRYGG 5 cut(s) 10, 235, 260, 771, 1183
BstENI CCTNNNNNAGG 1 cut(s) 929
BstF5I GGATG 3 cut(s) 45, 85, 1122
BstFNI CGCG 1 cut(s) 478
BstHHI GCGC 1 cut(s) 1065
BstMAI GTCTC 7 cut(s) 309, 538, 681, 747, 1088, 1278, 1854
BstMWI GCNNNNNNNGC 2 cut(s) 99, 1062
BstNI CCWGG 4 cut(s) 140, 151, 209, 1349
BstPAI GACNNNNGTC 2 cut(s) 980, 1521
BstSCI CCNGG 6 cut(s) 54, 138, 149, 207, 954, 1347
BstSFI CTRYAG 1 cut(s) 1512
BstUI CGCG 1 cut(s) 478
BstV1I GCAGC 3 cut(s) 27, 1344, 1587
BstX2I RGATCY 3 cut(s) 239, 996, 1507
BstXI CCANNNNNNTGG 1 cut(s) 1360
BstYI RGATCY 3 cut(s) 239, 996, 1507
Bsu36I CCTNAGG 1 cut(s) 1536
BsuI GTATCC 4 cut(s) 813, 1085, 1403, 1746
BtgI CCRYGG 5 cut(s) 10, 235, 260, 771, 1183
BtgZI GCGATG 1 cut(s) 140
BtrI CACGTC 1 cut(s) 1462
BtsCI GGATG 3 cut(s) 45, 85, 1122
BtsI GCAGTG 1 cut(s) 1163
BtsIMutI CAGTG 7 cut(s) 461, 583, 634, 786, 865, 1163, 1497
BveI ACCTGC 1 cut(s) 1769
Cac8I GCNNGC 1 cut(s) 894
CaiI CAGNNNCTG 2 cut(s) 1682, 1820
CciI TCATGA 1 cut(s) 616
CfoI GCGC 1 cut(s) 1065
CseI GACGC 2 cut(s) 1087, 1166
Csp6I GTAC 1 cut(s) 777
CspCI CAANNNNNGTGG 4 cut(s) 71, 106, 715, 750
CviAII CATG 6 cut(s) 11, 617, 1058, 1166, 1184, 1786
CviQI GTAC 1 cut(s) 777
DdeI CTNAG 3 cut(s) 287, 1486, 1536
EaeI YGGCCR 4 cut(s) 257, 1012, 1054, 1350
Eam1104I CTCTTC 2 cut(s) 1498, 1725
EarI CTCTTC 2 cut(s) 1498, 1725
Eco130I CCWWGG 7 cut(s) 10, 375, 925, 1009, 1183, 1222, 1329
Eco24I GRGCYC 1 cut(s) 62
Eco31I GGTCTC 2 cut(s) 309, 747
Eco32I GATATC 1 cut(s) 1190
Eco47I GGWCC 6 cut(s) 7, 147, 232, 655, 883, 1600
Eco57I CTGAAG 1 cut(s) 416
Eco72I CACGTG 1 cut(s) 1381
Eco81I CCTNAGG 1 cut(s) 1536
Eco88I CYCGRG 1 cut(s) 1721
EcoNI CCTNNNNNAGG 1 cut(s) 929
EcoO109I RGGNCCY 2 cut(s) 147, 883
EcoRI GAATTC 2 cut(s) 600, 842
EcoRII CCWGG 4 cut(s) 138, 149, 207, 1347
EcoRV GATATC 1 cut(s) 1190
EcoT14I CCWWGG 7 cut(s) 10, 375, 925, 1009, 1183, 1222, 1329
EcoT38I GRGCYC 1 cut(s) 62
ErhI CCWWGG 7 cut(s) 10, 375, 925, 1009, 1183, 1222, 1329
Esp3I CGTCTC 1 cut(s) 1088
FaeI CATG 6 cut(s) 14, 620, 1061, 1169, 1187, 1789
FaqI GGGAC 5 cut(s) 160, 896, 988, 1120, 1384
FatI CATG 6 cut(s) 10, 616, 1057, 1165, 1183, 1785
FauI CCCGC 2 cut(s) 147, 1360
FblI GTMKAC 1 cut(s) 1515
Fnu4HI GCNGC 5 cut(s) 16, 19, 163, 1358, 1576
FokI GGATG 3 cut(s) 52, 72, 1129
FriOI GRGCYC 1 cut(s) 62
Fsp4HI GCNGC 5 cut(s) 16, 19, 163, 1358, 1576
FspBI CTAG 2 cut(s) 119, 827
GlaI GCGC 1 cut(s) 1064
GluI GCNGC 5 cut(s) 16, 19, 163, 1358, 1576
GsaI CCCAGC 3 cut(s) 269, 501, 1364
GsuI CTGGAG 2 cut(s) 161, 771
HapII CCGG 3 cut(s) 55, 63, 955
HgaI GACGC 2 cut(s) 1087, 1166
HhaI GCGC 1 cut(s) 1065
Hin1II CATG 6 cut(s) 14, 620, 1061, 1169, 1187, 1789
Hin6I GCGC 1 cut(s) 1063
HinP1I GCGC 1 cut(s) 1063
HincII GTYRAC 1 cut(s) 1138
HindII GTYRAC 1 cut(s) 1138
HindIII AAGCTT 1 cut(s) 381
HinfI GANTC 9 cut(s) 295, 508, 638, 976, 1108, 1679, 1724, 1771, 1796
HpaII CCGG 3 cut(s) 55, 63, 955
HphI GGTGA 1 cut(s) 1172
Hpy166II GTNNAC 5 cut(s) 873, 952, 1138, 1516, 1600
Hpy8I GTNNAC 5 cut(s) 873, 952, 1138, 1516, 1600
Hpy99I CGWCG 1 cut(s) 1103
HpyAV CCTTC 6 cut(s) 161, 391, 752, 801, 1097, 1752
HpyCH4III ACNGT 5 cut(s) 454, 465, 532, 781, 1766
HpyCH4IV ACGT 4 cut(s) 178, 1380, 1413, 1461
HpyCH4V TGCA 1 cut(s) 896
HpyF10VI GCNNNNNNNGC 2 cut(s) 99, 1062
HpyF3I CTNAG 3 cut(s) 287, 1486, 1536
HpySE526I ACGT 4 cut(s) 178, 1380, 1413, 1461
Hsp92II CATG 6 cut(s) 14, 620, 1061, 1169, 1187, 1789
HspAI GCGC 1 cut(s) 1063
LmnI GCTCC 6 cut(s) 57, 65, 562, 820, 1153, 1537
Lsp1109I GCAGC 3 cut(s) 27, 1344, 1587
LweI GCATC 5 cut(s) 112, 172, 183, 336, 344
MaeI CTAG 2 cut(s) 119, 827
MaeII ACGT 4 cut(s) 178, 1380, 1413, 1461
MaeIII GTNAC 7 cut(s) 197, 629, 808, 1178, 1376, 1381, 1457
MboII GAAGA 7 cut(s) 596, 767, 786, 1515, 1593, 1601, 1742
MfeI CAATTG 1 cut(s) 1050
MflI RGATCY 3 cut(s) 239, 996, 1507
MhlI GDGCHC 3 cut(s) 62, 73, 1648
MlsI TGGCCA 3 cut(s) 1014, 1056, 1352
MluNI TGGCCA 3 cut(s) 1014, 1056, 1352
MlyI GAGTC 5 cut(s) 970, 1102, 1733, 1765, 1790
Mox20I TGGCCA 3 cut(s) 1014, 1056, 1352
MroXI GAANNNNTTC 2 cut(s) 171, 585
MscI TGGCCA 3 cut(s) 1014, 1056, 1352
MseI TTAA 7 cut(s) 546, 714, 878, 990, 1290, 1560, 1637
Msp20I TGGCCA 3 cut(s) 1014, 1056, 1352
MspA1I CMGCKG 1 cut(s) 18
MspI CCGG 3 cut(s) 55, 63, 955
MspR9I CCNGG 6 cut(s) 56, 140, 151, 209, 956, 1349
MunI CAATTG 1 cut(s) 1050
MvaI CCWGG 4 cut(s) 140, 151, 209, 1349
MvnI CGCG 1 cut(s) 478
MwoI GCNNNNNNNGC 2 cut(s) 99, 1062
NciI CCSGG 2 cut(s) 56, 956
NcoI CCATGG 2 cut(s) 10, 1183
NlaIII CATG 6 cut(s) 14, 620, 1061, 1169, 1187, 1789
NmuCI GTSAC 6 cut(s) 197, 629, 1178, 1376, 1381, 1457
PaeR7I CTCGAG 1 cut(s) 1721
PagI TCATGA 1 cut(s) 616
PcsI WCGNNNNNNNCGW 1 cut(s) 1762
PdmI GAANNNNTTC 2 cut(s) 171, 585
PfeI GAWTC 4 cut(s) 295, 508, 638, 1679
PfoI TCCNGGA 1 cut(s) 138
PkrI GCNGC 5 cut(s) 17, 20, 164, 1359, 1577
PleI GAGTC 5 cut(s) 970, 1102, 1732, 1765, 1790
PmaCI CACGTG 1 cut(s) 1381
PmlI CACGTG 1 cut(s) 1381
PpsI GAGTC 5 cut(s) 970, 1102, 1732, 1765, 1790
Ppu21I YACGTR 2 cut(s) 1381, 1414
PpuMI RGGWCCY 2 cut(s) 147, 883
PshAI GACNNNNGTC 2 cut(s) 980, 1521
Psp5II RGGWCCY 2 cut(s) 147, 883
Psp6I CCWGG 4 cut(s) 138, 149, 207, 1347
PspCI CACGTG 1 cut(s) 1381
PspFI CCCAGC 3 cut(s) 265, 497, 1360
PspGI CCWGG 4 cut(s) 138, 149, 207, 1347
PspPPI RGGWCCY 2 cut(s) 147, 883
PspXI VCTCGAGB 1 cut(s) 1721
PstNI CAGNNNCTG 2 cut(s) 1682, 1820
PsuI RGATCY 3 cut(s) 239, 996, 1507
RsaI GTAC 1 cut(s) 778
RsaNI GTAC 1 cut(s) 777
SaqAI TTAA 7 cut(s) 546, 714, 878, 990, 1290, 1560, 1637
SatI GCNGC 5 cut(s) 16, 19, 163, 1358, 1576
SchI GAGTC 5 cut(s) 970, 1102, 1733, 1765, 1790
ScrFI CCNGG 6 cut(s) 56, 140, 151, 209, 956, 1349
SduI GDGCHC 3 cut(s) 62, 73, 1648
SfaNI GCATC 5 cut(s) 112, 172, 183, 336, 344
SfcI CTRYAG 1 cut(s) 1512
Sfr274I CTCGAG 1 cut(s) 1721
SinI GGWCC 6 cut(s) 7, 147, 232, 655, 883, 1600
SlaI CTCGAG 1 cut(s) 1721
SmlI CTYRAG 3 cut(s) 887, 1721, 1773
SmoI CTYRAG 3 cut(s) 887, 1721, 1773
SsiI CCGC 5 cut(s) 18, 66, 154, 162, 1367
SspMI CTAG 2 cut(s) 119, 827
StyD4I CCNGG 6 cut(s) 54, 138, 149, 207, 954, 1347
StyI CCWWGG 7 cut(s) 10, 375, 925, 1009, 1183, 1222, 1329
TaaI ACNGT 5 cut(s) 454, 465, 532, 781, 1766
TaiI ACGT 4 cut(s) 181, 1383, 1416, 1464
TaqI TCGA 6 cut(s) 556, 1101, 1282, 1722, 1756, 1794
TauI GCSGC 2 cut(s) 21, 165
TfiI GAWTC 4 cut(s) 295, 508, 638, 1679
Tru1I TTAA 7 cut(s) 546, 714, 878, 990, 1290, 1560, 1637
Tru9I TTAA 7 cut(s) 546, 714, 878, 990, 1290, 1560, 1637
TscAI CASTG 7 cut(s) 468, 583, 634, 786, 872, 1163, 1504
TseFI GTSAC 6 cut(s) 197, 629, 1178, 1376, 1381, 1457
TseI GCWGC 3 cut(s) 15, 1357, 1575
Tsp45I GTSAC 6 cut(s) 197, 629, 1178, 1376, 1381, 1457
TspDTI ATGAA 5 cut(s) 605, 699, 786, 1154, 1464
TspGWI ACGGA 2 cut(s) 224, 1703
TspRI CASTG 7 cut(s) 468, 583, 634, 786, 872, 1163, 1504
VpaK11BI GGWCC 6 cut(s) 7, 147, 232, 655, 883, 1600
XagI CCTNNNNNAGG 1 cut(s) 929
XapI RAATTY 6 cut(s) 581, 600, 842, 1028, 1072, 1810
XbaI TCTAGA 1 cut(s) 118
XhoI CTCGAG 1 cut(s) 1721
XmiI GTMKAC 1 cut(s) 1515
XmnI GAANNNNTTC 2 cut(s) 171, 585
XspI CTAG 2 cut(s) 119, 827
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.