HTH transcriptional regulator, Myb-type, DNA-binding (InterPro IPR017930), Homeodomain-related (InterPro IPR012287), Myb transcription factor (InterPro IPR015495)
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G09710 AT1G09710 AT1G09710 AT1G09710 AT1G09710 AT1G58220 AT1G58220 |
| fragaria_vesca | FvH4_4g17970 FvH4_5g34820 FvH4_5g34820 FvH4_5g34820 FvH4_5g34820 FvH4_5g34820 FvH4_5g34820 |
| malus_domestica | MD08G1198900.v1.1 MD15G1385800.v1.1 MD15G1386000.v1.1 |
| prunus_persica | Prupe.1G532600_v2.0.a1 Prupe.1G532600_v2.0.a1 Prupe.1G532600_v2.0.a1 Prupe.1G532600_v2.0.a1 Prupe.1G532700_v2.0.a1 Prupe.1G532700_v2.0.a1 Prupe.1G532700_v2.0.a1 Prupe.1G532700_v2.0.a1 |
| pyrus_communis | pycom08g17100 pycom08g17280 pycom15g34620 |
| rosa_chinensis | RchiOBHm_Chr7g0235501 |
| rosa_laevigata | RLG00000001154 |
| rosa_multiflora | Rmu_sc0002892.1_g000016 Rmu_sc0004498.1_g000008 Rmu_sc0039003.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00225950 |
| rosa_rugosa | Rorug07G0291300 Rorug07G0291400 |
| rosa_samantha | Rh7AG446400 Rh7BG418100 Rh7CG466300 Rh7DG434900 |
| rosa_wichuraiana | Rw7G037060 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 342 |
| Acc65I | GGTACC | 1 cut(s) | 881 |
| AccB1I | GGYRCC | 3 cut(s) | 881, 908, 1162 |
| AclWI | GGATC | 2 cut(s) | 1891, 2128 |
| AcsI | RAATTY | 4 cut(s) | 674, 957, 1792, 2278 |
| AcuI | CTGAAG | 5 cut(s) | 116, 147, 552, 1200, 1317 |
| AfaI | GTAC | 6 cut(s) | 169, 883, 925, 1633, 2199, 2413 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 448, 2033, 2075, 2117, 2159, 2481 |
| AgsI | TTSAA | 5 cut(s) | 680, 747, 962, 1133, 1792 |
| AhlI | ACTAGT | 1 cut(s) | 179 |
| AjnI | CCWGG | 3 cut(s) | 304, 1101, 1135 |
| AleI | CACNNNNGTG | 1 cut(s) | 712 |
| Alw21I | GWGCWC | 2 cut(s) | 898, 1954 |
| Alw26I | GTCTC | 1 cut(s) | 2315 |
| AlwI | GGATC | 2 cut(s) | 1891, 2128 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 1079, 2006, 2048, 2132 |
| Ama87I | CYCGRG | 2 cut(s) | 255, 1005 |
| AoxI | GGCC | 4 cut(s) | 452, 654, 766, 1099 |
| ApaI | GGGCCC | 1 cut(s) | 658 |
| ApoI | RAATTY | 4 cut(s) | 674, 957, 1792, 2278 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1514, 1546 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 35 |
| Asp718I | GGTACC | 1 cut(s) | 881 |
| AspLEI | GCGC | 1 cut(s) | 343 |
| AspS9I | GGNCC | 6 cut(s) | 452, 654, 655, 1784, 1936, 2484 |
| AsuHPI | GGTGA | 5 cut(s) | 493, 653, 1644, 1833, 2418 |
| AvaI | CYCGRG | 2 cut(s) | 255, 1005 |
| AvaII | GGWCC | 3 cut(s) | 1784, 1936, 2484 |
| AxyI | CCTNAGG | 1 cut(s) | 456 |
| BaeGI | GKGCMC | 1 cut(s) | 658 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 83, 116 |
| BanI | GGYRCC | 3 cut(s) | 881, 908, 1162 |
| BanII | GRGCYC | 2 cut(s) | 658, 1954 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 724, 756, 1633, 1665 |
| BbsI | GAAGAC | 3 cut(s) | 167, 402, 1175 |
| Bbv12I | GWGCWC | 2 cut(s) | 898, 1954 |
| BbvCI | CCTCAGC | 2 cut(s) | 600, 948 |
| BccI | CCATC | 9 cut(s) | 349, 472, 893, 1363, 1435, 1507, 1570, 1714, 2276 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1470, 1504 |
| BciT130I | CCWGG | 3 cut(s) | 306, 1103, 1137 |
| BcoDI | GTCTC | 1 cut(s) | 2315 |
| BcuI | ACTAGT | 1 cut(s) | 179 |
| BfaI | CTAG | 5 cut(s) | 180, 186, 1914, 2331, 2432 |
| BfmI | CTRYAG | 7 cut(s) | 770, 1083, 1407, 1479, 1614, 1686, 2436 |
| BlpI | GCTNAGC | 3 cut(s) | 1455, 1590, 1662 |
| BmcAI | AGTACT | 2 cut(s) | 169, 2413 |
| Bme1390I | CCNGG | 3 cut(s) | 306, 1103, 1137 |
| Bme18I | GGWCC | 3 cut(s) | 1784, 1936, 2484 |
| BmeT110I | CYCGRG | 2 cut(s) | 255, 1005 |
| BmgT120I | GGNCC | 6 cut(s) | 452, 654, 655, 1784, 1936, 2484 |
| BmrFI | CCNGG | 3 cut(s) | 306, 1103, 1137 |
| BmrI | ACTGGG | 1 cut(s) | 1733 |
| BmsI | GCATC | 3 cut(s) | 220, 308, 1931 |
| BmuI | ACTGGG | 1 cut(s) | 1733 |
| BpiI | GAAGAC | 3 cut(s) | 167, 402, 1175 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 216, 248 |
| BpmI | CTGGAG | 1 cut(s) | 327 |
| Bpu10I | CCTNAGC | 2 cut(s) | 600, 948 |
| Bpu1102I | GCTNAGC | 3 cut(s) | 1455, 1590, 1662 |
| BsaBI | GATNNNNATC | 1 cut(s) | 497 |
| BsaJI | CCNNGG | 4 cut(s) | 304, 572, 2235, 2418 |
| BsaWI | WCCGGW | 2 cut(s) | 878, 2486 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 300, 330, 2154, 2184 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 448, 2033, 2075, 2117, 2159, 2481 |
| Bse118I | RCCGGY | 1 cut(s) | 2188 |
| Bse1I | ACTGG | 5 cut(s) | 175, 558, 769, 992, 1739 |
| Bse21I | CCTNAGG | 1 cut(s) | 456 |
| Bse3DI | GCAATG | 1 cut(s) | 926 |
| Bse8I | GATNNNNATC | 1 cut(s) | 497 |
| BseBI | CCWGG | 3 cut(s) | 306, 1103, 1137 |
| BseDI | CCNNGG | 4 cut(s) | 304, 572, 2235, 2418 |
| BseGI | GGATG | 6 cut(s) | 271, 299, 498, 613, 875, 2268 |
| BseJI | GATNNNNATC | 1 cut(s) | 497 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 448, 2033, 2075, 2117, 2159, 2481 |
| BseMI | GCAATG | 1 cut(s) | 926 |
| BseMII | CTCAG | 9 cut(s) | 470, 591, 962, 1233, 1446, 1581, 1653, 2228, 2391 |
| BseNI | ACTGG | 5 cut(s) | 175, 558, 769, 992, 1739 |
| BseRI | GAGGAG | 5 cut(s) | 561, 617, 626, 1860, 2316 |
| BseSI | GKGCMC | 1 cut(s) | 658 |
| BseYI | CCCAGC | 2 cut(s) | 651, 2272 |
| BshFI | GGCC | 4 cut(s) | 454, 656, 768, 1101 |
| BshNI | GGYRCC | 3 cut(s) | 881, 908, 1162 |
| BsiHKAI | GWGCWC | 2 cut(s) | 898, 1954 |
| BsiHKCI | CYCGRG | 2 cut(s) | 255, 1005 |
| BsiSI | CCGG | 3 cut(s) | 879, 2189, 2487 |
| BslFI | GGGAC | 3 cut(s) | 221, 1922, 2497 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 448, 2033, 2075, 2117, 2159, 2481 |
| BsmAI | GTCTC | 1 cut(s) | 2315 |
| BsmFI | GGGAC | 3 cut(s) | 221, 1922, 2497 |
| BsmI | GAATGC | 1 cut(s) | 1150 |
| BsnI | GGCC | 4 cut(s) | 454, 656, 768, 1101 |
| BsoBI | CYCGRG | 2 cut(s) | 255, 1005 |
| Bsp120I | GGGCCC | 1 cut(s) | 654 |
| Bsp1286I | GDGCHC | 3 cut(s) | 658, 898, 1954 |
| Bsp1407I | TGTACA | 2 cut(s) | 1631, 2197 |
| Bsp143I | GATC | 2 cut(s) | 1883, 2120 |
| Bsp1720I | GCTNAGC | 3 cut(s) | 1455, 1590, 1662 |
| BspANI | GGCC | 4 cut(s) | 454, 656, 768, 1101 |
| BspCNI | CTCAG | 9 cut(s) | 469, 592, 961, 1234, 1447, 1582, 1654, 2227, 2392 |
| BspMAI | CTGCAG | 4 cut(s) | 1087, 1483, 1618, 1690 |
| BspPI | GGATC | 2 cut(s) | 1891, 2128 |
| BspT107I | GGYRCC | 3 cut(s) | 881, 908, 1162 |
| BsrDI | GCAATG | 1 cut(s) | 926 |
| BsrFI | RCCGGY | 1 cut(s) | 2188 |
| BsrGI | TGTACA | 2 cut(s) | 1631, 2197 |
| BsrI | ACTGG | 5 cut(s) | 175, 558, 769, 992, 1739 |
| BssAI | RCCGGY | 1 cut(s) | 2188 |
| BssECI | CCNNGG | 4 cut(s) | 304, 572, 2235, 2418 |
| BssMI | GATC | 2 cut(s) | 1883, 2120 |
| BssT1I | CCWWGG | 1 cut(s) | 2235 |
| Bst2UI | CCWGG | 3 cut(s) | 306, 1103, 1137 |
| Bst6I | CTCTTC | 3 cut(s) | 20, 572, 1492 |
| BstAUI | TGTACA | 2 cut(s) | 1631, 2197 |
| BstC8I | GCNNGC | 4 cut(s) | 443, 913, 1803, 2230 |
| BstDSI | CCRYGG | 1 cut(s) | 2418 |
| BstEII | GGTNACC | 1 cut(s) | 831 |
| BstF5I | GGATG | 6 cut(s) | 271, 299, 498, 613, 875, 2268 |
| BstHHI | GCGC | 1 cut(s) | 343 |
| BstKTI | GATC | 2 cut(s) | 1886, 2123 |
| BstMAI | GTCTC | 1 cut(s) | 2315 |
| BstMBI | GATC | 2 cut(s) | 1883, 2120 |
| BstNI | CCWGG | 3 cut(s) | 306, 1103, 1137 |
| BstNSI | RCATGY | 2 cut(s) | 347, 1805 |
| BstPI | GGTNACC | 1 cut(s) | 831 |
| BstSCI | CCNGG | 3 cut(s) | 304, 1101, 1135 |
| BstSFI | CTRYAG | 7 cut(s) | 770, 1083, 1407, 1479, 1614, 1686, 2436 |
| BstSLI | GKGCMC | 1 cut(s) | 658 |
| BstV2I | GAAGAC | 3 cut(s) | 167, 402, 1175 |
| BstX2I | RGATCY | 1 cut(s) | 1883 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 565 |
| BstYI | RGATCY | 1 cut(s) | 1883 |
| Bsu36I | CCTNAGG | 1 cut(s) | 456 |
| BsuRI | GGCC | 4 cut(s) | 454, 656, 768, 1101 |
| BtgI | CCRYGG | 1 cut(s) | 2418 |
| BtgZI | GCGATG | 1 cut(s) | 40 |
| BtsCI | GGATG | 6 cut(s) | 271, 299, 498, 613, 875, 2268 |
| BtsI | GCAGTG | 1 cut(s) | 922 |
| BtsIMutI | CAGTG | 6 cut(s) | 49, 922, 993, 1125, 1232, 2289 |
| Cac8I | GCNNGC | 4 cut(s) | 443, 913, 1803, 2230 |
| CaiI | CAGNNNCTG | 4 cut(s) | 1079, 2006, 2048, 2132 |
| CfoI | GCGC | 1 cut(s) | 343 |
| Cfr10I | RCCGGY | 1 cut(s) | 2188 |
| Cfr13I | GGNCC | 6 cut(s) | 452, 654, 655, 1784, 1936, 2484 |
| Csp6I | GTAC | 6 cut(s) | 168, 882, 924, 1632, 2198, 2412 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2286, 2321 |
| CviAII | CATG | 3 cut(s) | 344, 638, 1802 |
| CviQI | GTAC | 6 cut(s) | 168, 882, 924, 1632, 2198, 2412 |
| DpnI | GATC | 2 cut(s) | 1885, 2122 |
| DpnII | GATC | 2 cut(s) | 1883, 2120 |
| Eam1104I | CTCTTC | 3 cut(s) | 20, 572, 1492 |
| EarI | CTCTTC | 3 cut(s) | 20, 572, 1492 |
| EciI | GGCGGA | 3 cut(s) | 1594, 1666, 2244 |
| Ecl136II | GAGCTC | 1 cut(s) | 1952 |
| Eco130I | CCWWGG | 1 cut(s) | 2235 |
| Eco24I | GRGCYC | 2 cut(s) | 658, 1954 |
| Eco32I | GATATC | 2 cut(s) | 1368, 1512 |
| Eco47I | GGWCC | 3 cut(s) | 1784, 1936, 2484 |
| Eco53kI | GAGCTC | 1 cut(s) | 1952 |
| Eco57I | CTGAAG | 5 cut(s) | 116, 147, 552, 1200, 1317 |
| Eco81I | CCTNAGG | 1 cut(s) | 456 |
| Eco88I | CYCGRG | 2 cut(s) | 255, 1005 |
| Eco91I | GGTNACC | 1 cut(s) | 831 |
| EcoICRI | GAGCTC | 1 cut(s) | 1952 |
| EcoO109I | RGGNCCY | 2 cut(s) | 452, 655 |
| EcoO65I | GGTNACC | 1 cut(s) | 831 |
| EcoRII | CCWGG | 3 cut(s) | 304, 1101, 1135 |
| EcoRV | GATATC | 2 cut(s) | 1368, 1512 |
| EcoT14I | CCWWGG | 1 cut(s) | 2235 |
| EcoT38I | GRGCYC | 2 cut(s) | 658, 1954 |
| ErhI | CCWWGG | 1 cut(s) | 2235 |
| FaeI | CATG | 3 cut(s) | 347, 641, 1805 |
| FaqI | GGGAC | 3 cut(s) | 221, 1922, 2497 |
| FatI | CATG | 3 cut(s) | 343, 637, 1801 |
| FauNDI | CATATG | 1 cut(s) | 1863 |
| FokI | GGATG | 6 cut(s) | 278, 286, 505, 620, 862, 2255 |
| FriOI | GRGCYC | 2 cut(s) | 658, 1954 |
| FspBI | CTAG | 5 cut(s) | 180, 186, 1914, 2331, 2432 |
| FspI | TGCGCA | 1 cut(s) | 342 |
| GlaI | GCGC | 1 cut(s) | 342 |
| GsaI | CCCAGC | 2 cut(s) | 655, 2276 |
| GsuI | CTGGAG | 1 cut(s) | 327 |
| HaeIII | GGCC | 4 cut(s) | 454, 656, 768, 1101 |
| HapII | CCGG | 3 cut(s) | 879, 2189, 2487 |
| HhaI | GCGC | 1 cut(s) | 343 |
| Hin1II | CATG | 3 cut(s) | 347, 641, 1805 |
| Hin6I | GCGC | 1 cut(s) | 341 |
| HinP1I | GCGC | 1 cut(s) | 341 |
| HincII | GTYRAC | 1 cut(s) | 938 |
| HindII | GTYRAC | 1 cut(s) | 938 |
| HinfI | GANTC | 7 cut(s) | 227, 380, 398, 470, 862, 1529, 2323 |
| HpaII | CCGG | 3 cut(s) | 879, 2189, 2487 |
| HphI | GGTGA | 5 cut(s) | 493, 653, 1644, 1833, 2418 |
| Hpy166II | GTNNAC | 2 cut(s) | 938, 2198 |
| Hpy188I | TCNGA | 4 cut(s) | 385, 469, 522, 576 |
| Hpy188III | TCNNGA | 9 cut(s) | 263, 392, 458, 486, 1005, 1044, 1359, 1503, 1894 |
| Hpy8I | GTNNAC | 2 cut(s) | 938, 2198 |
| HpyAV | CCTTC | 7 cut(s) | 527, 638, 674, 726, 1224, 1845, 2488 |
| Hsp92II | CATG | 3 cut(s) | 347, 641, 1805 |
| HspAI | GCGC | 1 cut(s) | 341 |
| KpnI | GGTACC | 1 cut(s) | 885 |
| Kzo9I | GATC | 2 cut(s) | 1883, 2120 |
| LweI | GCATC | 3 cut(s) | 220, 308, 1931 |
| MaeI | CTAG | 5 cut(s) | 180, 186, 1914, 2331, 2432 |
| MalI | GATC | 2 cut(s) | 1885, 2122 |
| MboI | GATC | 2 cut(s) | 1883, 2120 |
| MflI | RGATCY | 1 cut(s) | 1883 |
| MhlI | GDGCHC | 3 cut(s) | 658, 898, 1954 |
| MluCI | AATT | 9 cut(s) | 139, 174, 290, 674, 957, 1069, 1792, 1900, 2278 |
| MlyI | GAGTC | 6 cut(s) | 389, 392, 464, 856, 1538, 2317 |
| MmeI | TCCRAC | 1 cut(s) | 1762 |
| MroXI | GAANNNNTTC | 1 cut(s) | 35 |
| MseI | TTAA | 3 cut(s) | 426, 630, 1796 |
| MslI | CAYNNNNRTG | 1 cut(s) | 712 |
| MspA1I | CMGCKG | 8 cut(s) | 530, 599, 651, 712, 1112, 1259, 1328, 1472 |
| MspI | CCGG | 3 cut(s) | 879, 2189, 2487 |
| MspR9I | CCNGG | 3 cut(s) | 306, 1103, 1137 |
| Mva1269I | GAATGC | 1 cut(s) | 1150 |
| MvaI | CCWGG | 3 cut(s) | 306, 1103, 1137 |
| NdeI | CATATG | 1 cut(s) | 1863 |
| NdeII | GATC | 2 cut(s) | 1883, 2120 |
| NlaIII | CATG | 3 cut(s) | 347, 641, 1805 |
| NmuCI | GTSAC | 6 cut(s) | 85, 1969, 2011, 2176, 2424, 2476 |
| NsbI | TGCGCA | 1 cut(s) | 342 |
| NspI | RCATGY | 2 cut(s) | 347, 1805 |
| OliI | CACNNNNGTG | 1 cut(s) | 712 |
| PaeI | GCATGC | 1 cut(s) | 1805 |
| PaeR7I | CTCGAG | 2 cut(s) | 255, 1005 |
| PctI | GAATGC | 1 cut(s) | 1150 |
| PdmI | GAANNNNTTC | 1 cut(s) | 35 |
| PfeI | GAWTC | 1 cut(s) | 227 |
| PleI | GAGTC | 6 cut(s) | 388, 392, 464, 856, 1537, 2317 |
| PpsI | GAGTC | 6 cut(s) | 388, 392, 464, 856, 1537, 2317 |
| Psp124BI | GAGCTC | 1 cut(s) | 1954 |
| Psp6I | CCWGG | 3 cut(s) | 304, 1101, 1135 |
| PspEI | GGTNACC | 1 cut(s) | 831 |
| PspFI | CCCAGC | 2 cut(s) | 651, 2272 |
| PspGI | CCWGG | 3 cut(s) | 304, 1101, 1135 |
| PspOMI | GGGCCC | 1 cut(s) | 654 |
| PspPI | GGNCC | 6 cut(s) | 452, 654, 655, 1784, 1936, 2484 |
| PspXI | VCTCGAGB | 1 cut(s) | 255 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1734, 1766 |
| PstI | CTGCAG | 4 cut(s) | 1087, 1483, 1618, 1690 |
| PstNI | CAGNNNCTG | 4 cut(s) | 1079, 2006, 2048, 2132 |
| PsuI | RGATCY | 1 cut(s) | 1883 |
| PvuII | CAGCTG | 3 cut(s) | 530, 599, 651 |
| RsaI | GTAC | 6 cut(s) | 169, 883, 925, 1633, 2199, 2413 |
| RsaNI | GTAC | 6 cut(s) | 168, 882, 924, 1632, 2198, 2412 |
| RseI | CAYNNNNRTG | 1 cut(s) | 712 |
| SacI | GAGCTC | 1 cut(s) | 1954 |
| SaqAI | TTAA | 3 cut(s) | 426, 630, 1796 |
| Sau3AI | GATC | 2 cut(s) | 1883, 2120 |
| Sau96I | GGNCC | 6 cut(s) | 452, 654, 655, 1784, 1936, 2484 |
| ScaI | AGTACT | 2 cut(s) | 169, 2413 |
| SchI | GAGTC | 6 cut(s) | 389, 392, 464, 856, 1538, 2317 |
| ScrFI | CCNGG | 3 cut(s) | 306, 1103, 1137 |
| SduI | GDGCHC | 3 cut(s) | 658, 898, 1954 |
| SfaNI | GCATC | 3 cut(s) | 220, 308, 1931 |
| SfcI | CTRYAG | 7 cut(s) | 770, 1083, 1407, 1479, 1614, 1686, 2436 |
| Sfr274I | CTCGAG | 2 cut(s) | 255, 1005 |
| SinI | GGWCC | 3 cut(s) | 1784, 1936, 2484 |
| SlaI | CTCGAG | 2 cut(s) | 255, 1005 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 712 |
| SmlI | CTYRAG | 2 cut(s) | 255, 1005 |
| SmoI | CTYRAG | 2 cut(s) | 255, 1005 |
| SpeI | ACTAGT | 1 cut(s) | 179 |
| SphI | GCATGC | 1 cut(s) | 1805 |
| Sse9I | AATT | 9 cut(s) | 139, 174, 290, 674, 957, 1069, 1792, 1900, 2278 |
| SspMI | CTAG | 5 cut(s) | 180, 186, 1914, 2331, 2432 |
| SstI | GAGCTC | 1 cut(s) | 1954 |
| StyD4I | CCNGG | 3 cut(s) | 304, 1101, 1135 |
| StyI | CCWWGG | 1 cut(s) | 2235 |
| TaqI | TCGA | 3 cut(s) | 256, 1006, 1043 |
| TasI | AATT | 9 cut(s) | 139, 174, 290, 674, 957, 1069, 1792, 1900, 2278 |
| TatI | WGTACW | 5 cut(s) | 167, 923, 1631, 2197, 2411 |
| TauI | GCSGC | 5 cut(s) | 211, 1610, 1682, 1961, 2000 |
| TfiI | GAWTC | 1 cut(s) | 227 |
| Tru1I | TTAA | 3 cut(s) | 426, 630, 1796 |
| Tru9I | TTAA | 3 cut(s) | 426, 630, 1796 |
| TscAI | CASTG | 6 cut(s) | 49, 922, 993, 1125, 1239, 2289 |
| TseFI | GTSAC | 6 cut(s) | 85, 1969, 2011, 2176, 2424, 2476 |
| Tsp45I | GTSAC | 6 cut(s) | 85, 1969, 2011, 2176, 2424, 2476 |
| TspDTI | ATGAA | 8 cut(s) | 28, 152, 509, 1272, 1827, 2367, 2373, 2481 |
| TspGWI | ACGGA | 1 cut(s) | 344 |
| TspRI | CASTG | 6 cut(s) | 49, 922, 993, 1125, 1239, 2289 |
| VpaK11BI | GGWCC | 3 cut(s) | 1784, 1936, 2484 |
| XapI | RAATTY | 4 cut(s) | 674, 957, 1792, 2278 |
| XceI | RCATGY | 2 cut(s) | 347, 1805 |
| XhoI | CTCGAG | 2 cut(s) | 255, 1005 |
| XmnI | GAANNNNTTC | 1 cut(s) | 35 |
| XspI | CTAG | 5 cut(s) | 180, 186, 1914, 2331, 2432 |
| ZrmI | AGTACT | 2 cut(s) | 169, 2413 |