SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G09710 AT1G09710 AT1G09710 AT1G09710 AT1G09710 AT1G58220 AT1G58220 |
| fragaria_vesca | FvH4_4g17970 FvH4_5g34820 FvH4_5g34820 FvH4_5g34820 FvH4_5g34820 FvH4_5g34820 FvH4_5g34820 |
| malus_domestica | MD08G1198900.v1.1 MD15G1385800.v1.1 MD15G1386000.v1.1 |
| prunus_persica | Prupe.1G532600_v2.0.a1 Prupe.1G532600_v2.0.a1 Prupe.1G532600_v2.0.a1 Prupe.1G532600_v2.0.a1 Prupe.1G532700_v2.0.a1 Prupe.1G532700_v2.0.a1 Prupe.1G532700_v2.0.a1 Prupe.1G532700_v2.0.a1 |
| pyrus_communis | pycom08g17100 pycom08g17280 pycom15g34620 |
| rosa_chinensis | RchiOBHm_Chr7g0235501 |
| rosa_laevigata | RLG00000001154 |
| rosa_multiflora | Rmu_sc0002892.1_g000016 Rmu_sc0004498.1_g000008 Rmu_sc0039003.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00225950 |
| rosa_rugosa | Rorug07G0291300 Rorug07G0291400 |
| rosa_samantha | Rh7AG446400 Rh7BG418100 Rh7CG466300 Rh7DG434900 |
| rosa_wichuraiana | Rw7G037060 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1462 |
| AccI | GTMKAC | 1 cut(s) | 385 |
| AciI | CCGC | 3 cut(s) | 66, 330, 778 |
| AclWI | GGATC | 2 cut(s) | 1054, 1664 |
| AcoI | YGGCCR | 2 cut(s) | 168, 454 |
| AcsI | RAATTY | 1 cut(s) | 254 |
| AcuI | CTGAAG | 4 cut(s) | 471, 594, 1032, 1476 |
| AdeI | CACNNNGTG | 2 cut(s) | 816, 1262 |
| AfaI | GTAC | 3 cut(s) | 86, 1312, 1488 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 31, 329, 1232, 1499 |
| AflII | CTTAAG | 2 cut(s) | 1184, 1742 |
| AgsI | TTSAA | 5 cut(s) | 8, 342, 724, 1405, 1511 |
| AjnI | CCWGG | 5 cut(s) | 849, 1258, 1360, 1447, 1492 |
| AleI | CACNNNNGTG | 1 cut(s) | 419 |
| AluBI | AGCT | 7 cut(s) | 269, 338, 572, 748, 845, 1400, 1544 |
| AluI | AGCT | 7 cut(s) | 269, 338, 572, 748, 845, 1400, 1544 |
| Alw21I | GWGCWC | 1 cut(s) | 271 |
| Alw26I | GTCTC | 2 cut(s) | 670, 1636 |
| AlwI | GGATC | 2 cut(s) | 1054, 1664 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 350, 1142, 1175 |
| AoxI | GGCC | 6 cut(s) | 168, 272, 454, 878, 1015, 1315 |
| ApoI | RAATTY | 1 cut(s) | 254 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 944, 976 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 44 |
| AspS9I | GGNCC | 5 cut(s) | 367, 878, 1316, 1365, 1474 |
| AsuC2I | CCSGG | 1 cut(s) | 1319 |
| AsuHPI | GGTGA | 8 cut(s) | 29, 43, 344, 698, 839, 1646, 1676, 1700 |
| AvaII | GGWCC | 3 cut(s) | 367, 1365, 1474 |
| AxyI | CCTNAGG | 2 cut(s) | 27, 276 |
| BaeGI | GKGCMC | 2 cut(s) | 908, 1153 |
| BalI | TGGCCA | 2 cut(s) | 170, 456 |
| BanII | GRGCYC | 1 cut(s) | 271 |
| BbsI | GAAGAC | 1 cut(s) | 1698 |
| Bbv12I | GWGCWC | 1 cut(s) | 271 |
| BccI | CCATC | 8 cut(s) | 7, 257, 411, 487, 753, 1350, 1601, 1681 |
| BceAI | ACGGC | 1 cut(s) | 943 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1289, 1323 |
| BciT130I | CCWGG | 5 cut(s) | 851, 1260, 1362, 1449, 1494 |
| BciVI | GTATCC | 1 cut(s) | 1390 |
| BcnI | CCSGG | 1 cut(s) | 1319 |
| BcoDI | GTCTC | 2 cut(s) | 670, 1636 |
| BfaI | CTAG | 4 cut(s) | 198, 399, 600, 1353 |
| BfmI | CTRYAG | 4 cut(s) | 113, 351, 558, 1134 |
| BfrI | CTTAAG | 2 cut(s) | 1184, 1742 |
| BfuAI | ACCTGC | 1 cut(s) | 1462 |
| BfuI | GTATCC | 1 cut(s) | 1390 |
| BmcAI | AGTACT | 1 cut(s) | 1488 |
| Bme1390I | CCNGG | 6 cut(s) | 851, 1260, 1319, 1362, 1449, 1494 |
| Bme18I | GGWCC | 3 cut(s) | 367, 1365, 1474 |
| BmgT120I | GGNCC | 5 cut(s) | 367, 878, 1316, 1365, 1474 |
| BmiI | GGNNCC | 4 cut(s) | 240, 429, 615, 1366 |
| BmrFI | CCNGG | 6 cut(s) | 851, 1260, 1319, 1362, 1449, 1494 |
| BmrI | ACTGGG | 2 cut(s) | 192, 1440 |
| BmsI | GCATC | 5 cut(s) | 201, 574, 899, 1162, 1309 |
| BmuI | ACTGGG | 2 cut(s) | 192, 1440 |
| BpiI | GAAGAC | 1 cut(s) | 1698 |
| BpuEI | CTTGAG | 1 cut(s) | 1182 |
| BpuMI | CCSGG | 1 cut(s) | 1319 |
| Bsa29I | ATCGAT | 1 cut(s) | 150 |
| BsaI | GGTCTC | 1 cut(s) | 670 |
| BsaJI | CCNNGG | 5 cut(s) | 617, 1360, 1361, 1447, 1492 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 522, 552 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 31, 329, 1232, 1499 |
| Bse1I | ACTGG | 7 cut(s) | 108, 187, 457, 515, 666, 1318, 1435 |
| Bse21I | CCTNAGG | 2 cut(s) | 27, 276 |
| Bse3DI | GCAATG | 3 cut(s) | 107, 552, 833 |
| BseBI | CCWGG | 5 cut(s) | 851, 1260, 1362, 1449, 1494 |
| BseCI | ATCGAT | 1 cut(s) | 150 |
| BseDI | CCNNGG | 5 cut(s) | 617, 1360, 1361, 1447, 1492 |
| BseGI | GGATG | 4 cut(s) | 286, 1288, 1342, 1415 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 31, 329, 1232, 1499 |
| BseMI | GCAATG | 3 cut(s) | 107, 552, 833 |
| BseMII | CTCAG | 5 cut(s) | 290, 767, 1178, 1536, 1586 |
| BseNI | ACTGG | 7 cut(s) | 108, 187, 457, 515, 666, 1318, 1435 |
| BseRI | GAGGAG | 7 cut(s) | 47, 309, 606, 659, 662, 1674, 1767 |
| BseSI | GKGCMC | 2 cut(s) | 908, 1153 |
| BseYI | CCCAGC | 1 cut(s) | 1145 |
| BshFI | GGCC | 6 cut(s) | 170, 274, 456, 880, 1017, 1317 |
| BshVI | ATCGAT | 1 cut(s) | 150 |
| BsiHKAI | GWGCWC | 1 cut(s) | 271 |
| BsiSI | CCGG | 1 cut(s) | 1319 |
| BslFI | GGGAC | 1 cut(s) | 743 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 31, 329, 1232, 1499 |
| BsmAI | GTCTC | 2 cut(s) | 670, 1636 |
| BsmBI | CGTCTC | 1 cut(s) | 1636 |
| BsmFI | GGGAC | 1 cut(s) | 743 |
| BsnI | GGCC | 6 cut(s) | 170, 274, 456, 880, 1017, 1317 |
| Bso31I | GGTCTC | 1 cut(s) | 670 |
| Bsp1286I | GDGCHC | 3 cut(s) | 271, 908, 1153 |
| Bsp143I | GATC | 6 cut(s) | 147, 593, 1046, 1425, 1669, 1738 |
| BspACI | CCGC | 3 cut(s) | 66, 330, 778 |
| BspANI | GGCC | 6 cut(s) | 170, 274, 456, 880, 1017, 1317 |
| BspCNI | CTCAG | 5 cut(s) | 289, 766, 1177, 1537, 1585 |
| BspDI | ATCGAT | 1 cut(s) | 150 |
| BspLI | GGNNCC | 4 cut(s) | 240, 429, 615, 1366 |
| BspMAI | CTGCAG | 4 cut(s) | 117, 355, 562, 1138 |
| BspMI | ACCTGC | 1 cut(s) | 1462 |
| BspPI | GGATC | 2 cut(s) | 1054, 1664 |
| BspTI | CTTAAG | 2 cut(s) | 1184, 1742 |
| BspTNI | GGTCTC | 1 cut(s) | 670 |
| BsrDI | GCAATG | 3 cut(s) | 107, 552, 833 |
| BsrI | ACTGG | 7 cut(s) | 108, 187, 457, 515, 666, 1318, 1435 |
| BssECI | CCNNGG | 5 cut(s) | 617, 1360, 1361, 1447, 1492 |
| BssMI | GATC | 6 cut(s) | 147, 593, 1046, 1425, 1669, 1738 |
| Bst2UI | CCWGG | 5 cut(s) | 851, 1260, 1362, 1449, 1494 |
| Bst4CI | ACNGT | 8 cut(s) | 421, 511, 816, 901, 910, 956, 1297, 1442 |
| Bst6I | CTCTTC | 2 cut(s) | 620, 1632 |
| BstAFI | CTTAAG | 2 cut(s) | 1184, 1742 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 816, 1142 |
| BstC8I | GCNNGC | 2 cut(s) | 840, 1153 |
| BstDEI | CTNAG | 7 cut(s) | 27, 276, 753, 1164, 1545, 1572, 1599 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1230 |
| BstF5I | GGATG | 4 cut(s) | 286, 1288, 1342, 1415 |
| BstKTI | GATC | 6 cut(s) | 150, 596, 1049, 1428, 1672, 1741 |
| BstMAI | GTCTC | 2 cut(s) | 670, 1636 |
| BstMBI | GATC | 6 cut(s) | 147, 593, 1046, 1425, 1669, 1738 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 569, 816, 839, 851, 1142, 1148, 1199 |
| BstNI | CCWGG | 5 cut(s) | 851, 1260, 1362, 1449, 1494 |
| BstNSI | RCATGY | 1 cut(s) | 360 |
| BstSCI | CCNGG | 6 cut(s) | 849, 1258, 1317, 1360, 1447, 1492 |
| BstSFI | CTRYAG | 4 cut(s) | 113, 351, 558, 1134 |
| BstSLI | GKGCMC | 2 cut(s) | 908, 1153 |
| BstV2I | GAAGAC | 1 cut(s) | 1698 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 410 |
| Bsu15I | ATCGAT | 1 cut(s) | 150 |
| Bsu36I | CCTNAGG | 2 cut(s) | 27, 276 |
| BsuI | GTATCC | 1 cut(s) | 1390 |
| BsuRI | GGCC | 6 cut(s) | 170, 274, 456, 880, 1017, 1317 |
| BsuTUI | ATCGAT | 1 cut(s) | 150 |
| BtsCI | GGATG | 4 cut(s) | 286, 1288, 1342, 1415 |
| BtsI | GCAGTG | 2 cut(s) | 1328, 1504 |
| BtsIMutI | CAGTG | 7 cut(s) | 426, 906, 906, 1328, 1428, 1504, 1706 |
| BveI | ACCTGC | 1 cut(s) | 1462 |
| Cac8I | GCNNGC | 2 cut(s) | 840, 1153 |
| CaiI | CAGNNNCTG | 3 cut(s) | 350, 1142, 1175 |
| Cfr13I | GGNCC | 5 cut(s) | 367, 878, 1316, 1365, 1474 |
| ClaI | ATCGAT | 1 cut(s) | 150 |
| CsiI | ACCWGGT | 1 cut(s) | 1258 |
| Csp6I | GTAC | 3 cut(s) | 85, 1311, 1487 |
| CviAII | CATG | 5 cut(s) | 357, 499, 610, 1222, 1736 |
| CviQI | GTAC | 3 cut(s) | 85, 1311, 1487 |
| DdeI | CTNAG | 7 cut(s) | 27, 276, 753, 1164, 1545, 1572, 1599 |
| DpnI | GATC | 6 cut(s) | 149, 595, 1048, 1427, 1671, 1740 |
| DpnII | GATC | 6 cut(s) | 147, 593, 1046, 1425, 1669, 1738 |
| DraIII | CACNNNGTG | 2 cut(s) | 816, 1262 |
| EaeI | YGGCCR | 2 cut(s) | 168, 454 |
| Eam1104I | CTCTTC | 2 cut(s) | 620, 1632 |
| EarI | CTCTTC | 2 cut(s) | 620, 1632 |
| Ecl136II | GAGCTC | 1 cut(s) | 269 |
| Eco147I | AGGCCT | 1 cut(s) | 1017 |
| Eco24I | GRGCYC | 1 cut(s) | 271 |
| Eco31I | GGTCTC | 1 cut(s) | 670 |
| Eco32I | GATATC | 1 cut(s) | 1120 |
| Eco47I | GGWCC | 3 cut(s) | 367, 1365, 1474 |
| Eco53kI | GAGCTC | 1 cut(s) | 269 |
| Eco57I | CTGAAG | 4 cut(s) | 471, 594, 1032, 1476 |
| Eco81I | CCTNAGG | 2 cut(s) | 27, 276 |
| EcoICRI | GAGCTC | 1 cut(s) | 269 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1230 |
| EcoO109I | RGGNCCY | 2 cut(s) | 367, 1365 |
| EcoRII | CCWGG | 5 cut(s) | 849, 1258, 1360, 1447, 1492 |
| EcoRV | GATATC | 1 cut(s) | 1120 |
| EcoT22I | ATGCAT | 1 cut(s) | 589 |
| EcoT38I | GRGCYC | 1 cut(s) | 271 |
| Esp3I | CGTCTC | 1 cut(s) | 1636 |
| FaeI | CATG | 5 cut(s) | 360, 502, 613, 1225, 1739 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1076, 1108 |
| FaqI | GGGAC | 1 cut(s) | 743 |
| FatI | CATG | 5 cut(s) | 356, 498, 609, 1221, 1735 |
| FauNDI | CATATG | 1 cut(s) | 472 |
| FblI | GTMKAC | 1 cut(s) | 385 |
| FokI | GGATG | 4 cut(s) | 293, 1275, 1329, 1402 |
| FriOI | GRGCYC | 1 cut(s) | 271 |
| FspBI | CTAG | 4 cut(s) | 198, 399, 600, 1353 |
| GsaI | CCCAGC | 1 cut(s) | 1149 |
| HaeIII | GGCC | 6 cut(s) | 170, 274, 456, 880, 1017, 1317 |
| HapII | CCGG | 1 cut(s) | 1319 |
| Hin1II | CATG | 5 cut(s) | 360, 502, 613, 1225, 1739 |
| HincII | GTYRAC | 2 cut(s) | 1394, 1438 |
| HindII | GTYRAC | 2 cut(s) | 1394, 1438 |
| HindIII | AAGCTT | 2 cut(s) | 336, 1398 |
| HinfI | GANTC | 6 cut(s) | 395, 700, 1060, 1111, 1547, 1576 |
| HpaI | GTTAAC | 1 cut(s) | 1438 |
| HpaII | CCGG | 1 cut(s) | 1319 |
| HphI | GGTGA | 8 cut(s) | 29, 43, 344, 698, 839, 1646, 1676, 1700 |
| Hpy166II | GTNNAC | 7 cut(s) | 87, 386, 639, 676, 1394, 1438, 1502 |
| Hpy188III | TCNNGA | 4 cut(s) | 278, 1115, 1419, 1511 |
| Hpy8I | GTNNAC | 7 cut(s) | 87, 386, 639, 676, 1394, 1438, 1502 |
| Hpy99I | CGWCG | 2 cut(s) | 97, 100 |
| HpyAV | CCTTC | 8 cut(s) | 34, 358, 569, 683, 797, 1007, 1344, 1508 |
| HpyCH4III | ACNGT | 8 cut(s) | 421, 511, 816, 901, 910, 956, 1297, 1442 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 569, 816, 839, 851, 1142, 1148, 1199 |
| HpyF3I | CTNAG | 7 cut(s) | 27, 276, 753, 1164, 1545, 1572, 1599 |
| Hsp92II | CATG | 5 cut(s) | 360, 502, 613, 1225, 1739 |
| KspAI | GTTAAC | 1 cut(s) | 1438 |
| Kzo9I | GATC | 6 cut(s) | 147, 593, 1046, 1425, 1669, 1738 |
| LmnI | GCTCC | 4 cut(s) | 266, 322, 433, 619 |
| LweI | GCATC | 5 cut(s) | 201, 574, 899, 1162, 1309 |
| MabI | ACCWGGT | 1 cut(s) | 1258 |
| MaeI | CTAG | 4 cut(s) | 198, 399, 600, 1353 |
| MaeIII | GTNAC | 5 cut(s) | 967, 1075, 1159, 1527, 1627 |
| MalI | GATC | 6 cut(s) | 149, 595, 1048, 1427, 1671, 1740 |
| MboI | GATC | 6 cut(s) | 147, 593, 1046, 1425, 1669, 1738 |
| MboII | GAAGA | 9 cut(s) | 49, 68, 71, 157, 634, 637, 1417, 1649, 1703 |
| MhlI | GDGCHC | 3 cut(s) | 271, 908, 1153 |
| MlsI | TGGCCA | 2 cut(s) | 170, 456 |
| MluCI | AATT | 2 cut(s) | 254, 694 |
| MluNI | TGGCCA | 2 cut(s) | 170, 456 |
| MlyI | GAGTC | 3 cut(s) | 694, 1054, 1556 |
| MmeI | TCCRAC | 1 cut(s) | 120 |
| Mox20I | TGGCCA | 2 cut(s) | 170, 456 |
| Mph1103I | ATGCAT | 1 cut(s) | 589 |
| MroXI | GAANNNNTTC | 1 cut(s) | 44 |
| MscI | TGGCCA | 2 cut(s) | 170, 456 |
| MslI | CAYNNNNRTG | 2 cut(s) | 408, 419 |
| Msp20I | TGGCCA | 2 cut(s) | 170, 456 |
| MspCI | CTTAAG | 2 cut(s) | 1184, 1742 |
| MspI | CCGG | 1 cut(s) | 1319 |
| MspR9I | CCNGG | 6 cut(s) | 851, 1260, 1319, 1362, 1449, 1494 |
| MvaI | CCWGG | 5 cut(s) | 851, 1260, 1362, 1449, 1494 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 569, 816, 839, 851, 1142, 1148, 1199 |
| NciI | CCSGG | 1 cut(s) | 1319 |
| NdeI | CATATG | 1 cut(s) | 472 |
| NdeII | GATC | 6 cut(s) | 147, 593, 1046, 1425, 1669, 1738 |
| NlaIII | CATG | 5 cut(s) | 360, 502, 613, 1225, 1739 |
| NlaIV | GGNNCC | 4 cut(s) | 240, 429, 615, 1366 |
| NmeAIII | GCCGAG | 1 cut(s) | 250 |
| NmuCI | GTSAC | 1 cut(s) | 1159 |
| NsiI | ATGCAT | 1 cut(s) | 589 |
| NspI | RCATGY | 1 cut(s) | 360 |
| OliI | CACNNNNGTG | 1 cut(s) | 419 |
| PasI | CCCWGGG | 1 cut(s) | 1361 |
| PceI | AGGCCT | 1 cut(s) | 1017 |
| PdmI | GAANNNNTTC | 1 cut(s) | 44 |
| PfeI | GAWTC | 3 cut(s) | 395, 1111, 1576 |
| PleI | GAGTC | 3 cut(s) | 694, 1054, 1555 |
| PpsI | GAGTC | 3 cut(s) | 694, 1054, 1555 |
| PpuMI | RGGWCCY | 2 cut(s) | 367, 1365 |
| Psp124BI | GAGCTC | 1 cut(s) | 271 |
| Psp5II | RGGWCCY | 2 cut(s) | 367, 1365 |
| Psp6I | CCWGG | 5 cut(s) | 849, 1258, 1360, 1447, 1492 |
| PspFI | CCCAGC | 1 cut(s) | 1145 |
| PspGI | CCWGG | 5 cut(s) | 849, 1258, 1360, 1447, 1492 |
| PspN4I | GGNNCC | 4 cut(s) | 240, 429, 615, 1366 |
| PspPI | GGNCC | 5 cut(s) | 367, 878, 1316, 1365, 1474 |
| PspPPI | RGGWCCY | 2 cut(s) | 367, 1365 |
| PstI | CTGCAG | 4 cut(s) | 117, 355, 562, 1138 |
| PstNI | CAGNNNCTG | 3 cut(s) | 350, 1142, 1175 |
| RsaI | GTAC | 3 cut(s) | 86, 1312, 1488 |
| RsaNI | GTAC | 3 cut(s) | 85, 1311, 1487 |
| RseI | CAYNNNNRTG | 2 cut(s) | 408, 419 |
| SacI | GAGCTC | 1 cut(s) | 271 |
| Sau3AI | GATC | 6 cut(s) | 147, 593, 1046, 1425, 1669, 1738 |
| Sau96I | GGNCC | 5 cut(s) | 367, 878, 1316, 1365, 1474 |
| ScaI | AGTACT | 1 cut(s) | 1488 |
| SchI | GAGTC | 3 cut(s) | 694, 1054, 1556 |
| ScrFI | CCNGG | 6 cut(s) | 851, 1260, 1319, 1362, 1449, 1494 |
| SduI | GDGCHC | 3 cut(s) | 271, 908, 1153 |
| SexAI | ACCWGGT | 1 cut(s) | 1258 |
| SfaNI | GCATC | 5 cut(s) | 201, 574, 899, 1162, 1309 |
| SfcI | CTRYAG | 4 cut(s) | 113, 351, 558, 1134 |
| SinI | GGWCC | 3 cut(s) | 367, 1365, 1474 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 408, 419 |
| SmlI | CTYRAG | 3 cut(s) | 1184, 1197, 1742 |
| SmoI | CTYRAG | 3 cut(s) | 1184, 1197, 1742 |
| Sse9I | AATT | 2 cut(s) | 254, 694 |
| SseBI | AGGCCT | 1 cut(s) | 1017 |
| SsiI | CCGC | 3 cut(s) | 66, 330, 778 |
| SspMI | CTAG | 4 cut(s) | 198, 399, 600, 1353 |
| SstI | GAGCTC | 1 cut(s) | 271 |
| StuI | AGGCCT | 1 cut(s) | 1017 |
| StyD4I | CCNGG | 6 cut(s) | 849, 1258, 1317, 1360, 1447, 1492 |
| TaaI | ACNGT | 8 cut(s) | 421, 511, 816, 901, 910, 956, 1297, 1442 |
| TaqI | TCGA | 4 cut(s) | 150, 258, 1058, 1072 |
| TasI | AATT | 2 cut(s) | 254, 694 |
| TatI | WGTACW | 1 cut(s) | 1486 |
| TauI | GCSGC | 1 cut(s) | 781 |
| TfiI | GAWTC | 3 cut(s) | 395, 1111, 1576 |
| TscAI | CASTG | 7 cut(s) | 426, 906, 913, 1335, 1435, 1504, 1713 |
| TseFI | GTSAC | 1 cut(s) | 1159 |
| Tsp45I | GTSAC | 1 cut(s) | 1159 |
| TspDTI | ATGAA | 7 cut(s) | 37, 318, 489, 515, 1124, 1497, 1578 |
| TspGWI | ACGGA | 1 cut(s) | 1729 |
| TspRI | CASTG | 7 cut(s) | 426, 906, 913, 1335, 1435, 1504, 1713 |
| Vha464I | CTTAAG | 2 cut(s) | 1184, 1742 |
| VpaK11BI | GGWCC | 3 cut(s) | 367, 1365, 1474 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1230 |
| XapI | RAATTY | 1 cut(s) | 254 |
| XceI | RCATGY | 1 cut(s) | 360 |
| XmiI | GTMKAC | 1 cut(s) | 385 |
| XmnI | GAANNNNTTC | 1 cut(s) | 44 |
| XspI | CTAG | 4 cut(s) | 198, 399, 600, 1353 |
| ZrmI | AGTACT | 1 cut(s) | 1488 |
| Zsp2I | ATGCAT | 1 cut(s) | 589 |