DNA repair protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G61410 AT3G23100 AT3G23100 |
| fragaria_vesca | FvH4_2g07190 FvH4_2g07190 |
| malus_domestica | MD13G1208000.v1.1 |
| prunus_persica | Prupe.1G031500_v2.0.a1 Prupe.1G031500_v2.0.a1 Prupe.1G031500_v2.0.a1 |
| pyrus_communis | pycom13g18010 |
| rosa_chinensis | RchiOBHm_Chr1g0323991 |
| rosa_laevigata | RLG00000030236 |
| rosa_multiflora | Rmu_sc0001861.1_g000102 Rmu_sc0002529.1_g000031 Rmu_sc0003452.1_g000009 Rmu_sc0005177.1_g000001 Rmu_sc0006175.1_g000019 |
| rosa_roxburghii | Rroxscaffold_160G00433790 Rroxscaffold_2G00104220 Rroxscaffold_4G00325990 Rroxscaffold_4G00328010 Rroxscaffold_4G00328020 |
| rosa_rugosa | Rorug01G0031900 Rorug01G0041300 Rorug03G0294600 |
| rosa_samantha | Rh1AG043800 Rh1AG059000 Rh1BG041300 Rh1CG046300 Rh1CG061100 Rh1DG051000 Rh1DG065200 Rh4BG282000 Rh5AG329500 Rh7AG348000 Rh7CG365400 Rh7CG365500 |
| rosa_wichuraiana | Rw1G003850 Rw1G005060 Rw4G020960 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 236 |
| AccII | CGCG | 1 cut(s) | 89 |
| AciI | CCGC | 1 cut(s) | 333 |
| AluBI | AGCT | 5 cut(s) | 74, 248, 255, 344, 354 |
| AluI | AGCT | 5 cut(s) | 74, 248, 255, 344, 354 |
| Alw26I | GTCTC | 1 cut(s) | 89 |
| ApeKI | GCWGC | 2 cut(s) | 318, 344 |
| AspLEI | GCGC | 1 cut(s) | 91 |
| AsuHPI | GGTGA | 1 cut(s) | 107 |
| BbvI | GCAGC | 2 cut(s) | 330, 331 |
| BcoDI | GTCTC | 1 cut(s) | 89 |
| BisI | GCNGC | 2 cut(s) | 319, 345 |
| BlsI | GCNGC | 2 cut(s) | 320, 346 |
| BsaJI | CCNNGG | 1 cut(s) | 328 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 218, 248 |
| BseDI | CCNNGG | 1 cut(s) | 328 |
| BseMII | CTCAG | 2 cut(s) | 66, 173 |
| BseRI | GAGGAG | 1 cut(s) | 239 |
| BseXI | GCAGC | 2 cut(s) | 330, 331 |
| BsgI | GTGCAG | 1 cut(s) | 330 |
| Bsh1236I | CGCG | 1 cut(s) | 89 |
| BslFI | GGGAC | 1 cut(s) | 209 |
| BsmAI | GTCTC | 1 cut(s) | 89 |
| BsmFI | GGGAC | 1 cut(s) | 209 |
| BsmI | GAATGC | 1 cut(s) | 136 |
| Bsp143I | GATC | 1 cut(s) | 47 |
| BspACI | CCGC | 1 cut(s) | 333 |
| BspCNI | CTCAG | 2 cut(s) | 67, 174 |
| BspFNI | CGCG | 1 cut(s) | 89 |
| BssECI | CCNNGG | 1 cut(s) | 328 |
| BssMI | GATC | 1 cut(s) | 47 |
| Bst6I | CTCTTC | 1 cut(s) | 225 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 140 |
| BstDEI | CTNAG | 3 cut(s) | 20, 75, 182 |
| BstDSI | CCRYGG | 1 cut(s) | 328 |
| BstFNI | CGCG | 1 cut(s) | 89 |
| BstHHI | GCGC | 1 cut(s) | 91 |
| BstKTI | GATC | 1 cut(s) | 50 |
| BstMAI | GTCTC | 1 cut(s) | 89 |
| BstMBI | GATC | 1 cut(s) | 47 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 140, 173 |
| BstUI | CGCG | 1 cut(s) | 89 |
| BstV1I | GCAGC | 2 cut(s) | 330, 331 |
| BtgI | CCRYGG | 1 cut(s) | 328 |
| BtgZI | GCGATG | 1 cut(s) | 123 |
| BtsIMutI | CAGTG | 1 cut(s) | 216 |
| CfoI | GCGC | 1 cut(s) | 91 |
| CseI | GACGC | 1 cut(s) | 288 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 310, 345 |
| CviJI | RGCY | 8 cut(s) | 8, 19, 74, 248, 255, 326, 344, 354 |
| CviKI_1 | RGCY | 8 cut(s) | 8, 19, 74, 248, 255, 326, 344, 354 |
| DdeI | CTNAG | 3 cut(s) | 20, 75, 182 |
| DpnI | GATC | 1 cut(s) | 49 |
| DpnII | GATC | 1 cut(s) | 47 |
| DraI | TTTAAA | 1 cut(s) | 162 |
| Eam1104I | CTCTTC | 1 cut(s) | 225 |
| EarI | CTCTTC | 1 cut(s) | 225 |
| EciI | GGCGGA | 1 cut(s) | 348 |
| FaiI | YATR | 4 cut(s) | 14, 106, 141, 241 |
| FaqI | GGGAC | 1 cut(s) | 209 |
| FblI | GTMKAC | 1 cut(s) | 236 |
| Fnu4HI | GCNGC | 2 cut(s) | 319, 345 |
| Fsp4HI | GCNGC | 2 cut(s) | 319, 345 |
| GlaI | GCGC | 1 cut(s) | 90 |
| GluI | GCNGC | 2 cut(s) | 319, 345 |
| HgaI | GACGC | 1 cut(s) | 288 |
| HhaI | GCGC | 1 cut(s) | 91 |
| Hin6I | GCGC | 1 cut(s) | 89 |
| HinP1I | GCGC | 1 cut(s) | 89 |
| HincII | GTYRAC | 1 cut(s) | 237 |
| HindII | GTYRAC | 1 cut(s) | 237 |
| HindIII | AAGCTT | 1 cut(s) | 253 |
| HinfI | GANTC | 2 cut(s) | 206, 233 |
| HphI | GGTGA | 1 cut(s) | 107 |
| Hpy166II | GTNNAC | 2 cut(s) | 37, 237 |
| Hpy188I | TCNGA | 1 cut(s) | 304 |
| Hpy188III | TCNNGA | 1 cut(s) | 259 |
| Hpy8I | GTNNAC | 2 cut(s) | 37, 237 |
| HpyAV | CCTTC | 1 cut(s) | 166 |
| HpyCH4V | TGCA | 4 cut(s) | 134, 143, 167, 347 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 140, 173 |
| HpyF3I | CTNAG | 3 cut(s) | 20, 75, 182 |
| HspAI | GCGC | 1 cut(s) | 89 |
| Kzo9I | GATC | 1 cut(s) | 47 |
| LmnI | GCTCC | 1 cut(s) | 351 |
| Lsp1109I | GCAGC | 2 cut(s) | 330, 331 |
| MalI | GATC | 1 cut(s) | 49 |
| MboI | GATC | 1 cut(s) | 47 |
| MboII | GAAGA | 6 cut(s) | 38, 70, 215, 242, 279, 305 |
| MlyI | GAGTC | 1 cut(s) | 242 |
| MnlI | CCTC | 2 cut(s) | 217, 220 |
| MseI | TTAA | 1 cut(s) | 161 |
| Mva1269I | GAATGC | 1 cut(s) | 136 |
| MvnI | CGCG | 1 cut(s) | 89 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 140, 173 |
| NdeII | GATC | 1 cut(s) | 47 |
| PctI | GAATGC | 1 cut(s) | 136 |
| PfeI | GAWTC | 1 cut(s) | 206 |
| PkrI | GCNGC | 2 cut(s) | 320, 346 |
| PleI | GAGTC | 1 cut(s) | 241 |
| PpsI | GAGTC | 1 cut(s) | 241 |
| SalI | GTCGAC | 1 cut(s) | 235 |
| SaqAI | TTAA | 1 cut(s) | 161 |
| SatI | GCNGC | 2 cut(s) | 319, 345 |
| Sau3AI | GATC | 1 cut(s) | 47 |
| SchI | GAGTC | 1 cut(s) | 242 |
| SetI | ASST | 6 cut(s) | 76, 97, 250, 257, 346, 356 |
| SgeI | CNNG | 9 cut(s) | 52, 57, 98, 100, 104, 271, 327, 339, 341 |
| SsiI | CCGC | 1 cut(s) | 333 |
| TaqI | TCGA | 2 cut(s) | 236, 258 |
| TfiI | GAWTC | 1 cut(s) | 206 |
| Tru1I | TTAA | 1 cut(s) | 161 |
| Tru9I | TTAA | 1 cut(s) | 161 |
| TscAI | CASTG | 1 cut(s) | 216 |
| TseI | GCWGC | 2 cut(s) | 318, 344 |
| TspDTI | ATGAA | 2 cut(s) | 77, 126 |
| TspRI | CASTG | 1 cut(s) | 216 |
| XmiI | GTMKAC | 1 cut(s) | 236 |