Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0002620

Physical Location & Seq

Genomic Coordinates Reverse (-)

6763903 .. 6766510

Gene Structure 2608 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0041300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2385 bp

ATGCTTATGATTTCATATCAGAAGCAGCGGAGCTCCCCCTCCCCAACTTCATCCTCTCATCTTTCTCCACCTACAATGAAACCAATCATCACTCTTCTCTACCTCTCCTTGTTCCTCCACATCCTCACTCTCTTCGTCGCCGGTCAGTCGCCACCATACACTCCGGTCGACAATATCACCCTGGCCTGCGGCAATTCCGGCCAACCGAGCTCCAATGACAACAGAAAGTGGAGTGGAGATATCGACTCAAAATTCACCCCAATTGGTAACGCATCCGAATCCATAAATGCACCGCCGTCGTCCACCGCTAGCCAAGTCCCTTACACCAAAGCTCGGCTCTCTCGCTCCAAATTCACTTACACAATTCCCCTCTCTCCCGGTCAAAAGTTCATCCGCTTGCATTTCAATCCAGATACATACAACCCGGACTTCCAACGCTCCAACTCCCTCTTCTCCGTCACCGCCGCCGGCTTCACTCTCCTCAAAGACTTCAACGCCTCCGTCACCGCCGACGCTTCCGGCGAGTCCCCGCTGGTCAGAGAATTCTGTTTAAACATCGAGACAGGAGAGAGACTCAACATCACCTTCACACCAAGCAAAGATGCGTACGCTTTCATCAACGGAATCGAAATCGTGTCCATGCCCACCGGTCTTTACTATACTTCTTCAGCTAATTTCATCGAGACCATCACAAGCTCATATCCGATCGAAAACAACACAGCTCTGGAGATGGTGTACCGAATCAACGTCGGCGGAGGCCCCATCTCGCCGAACACAGACACCGGAATGTACCGGACTTGGGACACCGGAGACGAAATTTATTTGGATGATATAAGTAAAAAATTGAGCGTGCTACCACAGAACAATACTATCGACCTCAATTTCGTCGAAGTTCCAGAATACTCTGCCCCAAAACCAGTTTACACAACAGGTCGGTCAATGGGGATGAACAAAACCATCAACAAGAGCTATAACCTCACATGGGTACTTCCCTTAGATCCCAAGTTTTATTACTTGGTGAGACTCCATTTCTGTGAGTTTGAATCTGATATTACCAAGTCTGGCGATCGGTCGTTTCAAATCTTCATGGCCAATCAAACCGCAGAAAATATTTTTGATGTTATCGCATCGAGCGGAGCAAATGGGAATCCAGTTTACAGAGACTACGTTGTGGGCATGTTCATGTCTCCGGTTGGAAGCCAGAAGAAAGTTAACCTCTTTCTAGAACTTGCAGCGCTACAGAGAGATTCGTATACTAAATACAACGATGCCATCTTGAACGGGCTGGAAATCTTCAAGCTCAATGACTCAAATGGGAATCTTGCCGGACCCAACCCCGATTCACCTCCACCAACGCTAGCGCAGCAAATCCCCAAAAGTTCAACCACAAGTAAATCACATACTTCTTTGCTTCCCATCATAGTTGGTGTACTCTCCGGAGTCCTACTTCTTCTCTCTGTTCTTGGAATTTTAGTTTTAAGGGGAGGAAGGAAAGTCGAGGAGTCTAGTTCCAGCCAGGGAACGTTGACTTTACCGTCCCGTTTGTGTCATAACTTTTCACTACCGGAGATGAAAGCCGCCACTCAAAACTTTAACGATTCTCGCATCATTGGAATTGGAGGGTTTGGCCATGTGTACGAAGGATTTCTTGAGGATGGGGCTACCCATGTTGTTGCAATCAAACGGTTGAAAGCCATGTCATCACAAGGGGCCCGCGAGTTTAGGATGGAAATCGAGATGCTCTCTCGACTTCGTCACCGCCATTTAGTGTCTCTTATTGGATACTGTGCCGATGAAGGAACTAAGGGCACCATCATTCACCGTGATGTGAAGAGCACAAACATATTATTGGATGAGAAATGGGTAGCCAAAGTTTCAGATTTTGGGTTGTCGAAGAATGGCACAATCACCCTTTCCAAGACCCACATTAGCACAAAGGTGAAGGGTAGTTTCGGATATCTTGACCCCGAATACTATCGACCTGTGACAACCGTGGACAATAATCGAGTCGGCCTGGCTGGATGGGCCAAAAAGTGTCATGGTAATGGGAAACTTGATCAAATTATTGACCCAAATTTGAAGGGTAAAATTGCAGTGAGATGCTTGCATAAATTTGTTTCCATCGCAATGCGTTGCATGGATGATTATGGGATCAATCGGCCATCAATGGATGATGTTGTGAGAGAGCTTCAATTTGCATTGAAGATGCAACAAAACAACGAGGACTATACTGATCGCATTGAAATGACAGGTCAAGATAAGATTGCATTGATCAAGGACATTGAAGGGTCTTGTTCTTGTGAGCAAAGTAGTGGGGCTAACGAATCCATCCAAGGGTTGACTGGCACAATCTTCTCCGAGATCATCGATCCGGTTGGGCGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000726 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006303 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009987 GO:0033554 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0046483 GO:0050896 GO:0051716 GO:0071704 GO:0090304 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko03450 map03450

Pfam Domains

Protein Families

XRCC4

Protein Analysis

794

Amino Acids

87.49

Weight (kDa)

6.93

Isoelectric Point (pI)

43.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Malectin_like	PF12819	62 - 433	8.5e-33	Malectin-like domain
Malectin	PF11721	245 - 389	8.2e-06	Malectin domain
Pkinase	PF00069	532 - 599	2.3e-07	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	535 - 599	2.8e-09	Protein tyrosine and serine/threonine kinase
PK_Tyr_Ser-Thr	PF07714	604 - 656	1.1e-06	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	604 - 658	5.4e-09	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002620)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G61410 AT3G23100 AT3G23100
fragaria_vesca	FvH4_2g07190 FvH4_2g07190
malus_domestica	MD13G1208000.v1.1
prunus_persica	Prupe.1G031500_v2.0.a1 Prupe.1G031500_v2.0.a1 Prupe.1G031500_v2.0.a1
pyrus_communis	pycom13g18010
rosa_chinensis	RchiOBHm_Chr1g0323991
rosa_laevigata	RLG00000030236
rosa_multiflora	Rmu_sc0001861.1_g000102 Rmu_sc0002529.1_g000031 Rmu_sc0003452.1_g000009 Rmu_sc0005177.1_g000001 Rmu_sc0006175.1_g000019
rosa_roxburghii	Rroxscaffold_160G00433790 Rroxscaffold_2G00104220 Rroxscaffold_4G00325990 Rroxscaffold_4G00328010 Rroxscaffold_4G00328020
rosa_rugosa	Rorug01G0031900 Rorug01G0041300 Rorug03G0294600
rosa_samantha	Rh1AG043800 Rh1AG059000 Rh1BG041300 Rh1CG046300 Rh1CG061100 Rh1DG051000 Rh1DG065200 Rh4BG282000 Rh5AG329500 Rh7AG348000 Rh7CG365400 Rh7CG365500
rosa_wichuraiana	Rw1G003850 Rw1G005060 Rw4G020960

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1534
AccB1I	GGYRCC	1 cut(s)	1808
AccBSI	CCGCTC	1 cut(s)	1134
AccI	GTMKAC	2 cut(s)	168, 1253
AccII	CGCG	1 cut(s)	1716
AccIII	TCCGGA	1 cut(s)	1436
AclI	AACGTT	1 cut(s)	1523
AclWI	GGATC	3 cut(s)	992, 2159, 2363
AcoI	YGGCCR	4 cut(s)	199, 1089, 1627, 2159
AcsI	RAATTY	7 cut(s)	251, 350, 542, 816, 1467, 2074, 2111
AcuI	CTGAAG	1 cut(s)	651
AfaI	GTAC	6 cut(s)	608, 737, 791, 987, 1431, 1637
AfeI	AGCGCT	1 cut(s)	1236
AfiI	CCNNNNNNNGG	4 cut(s)	333, 799, 982, 2334
AgeI	ACCGGT	1 cut(s)	647
AjnI	CCWGG	3 cut(s)	180, 1515, 2013
AjuI	GAANNNNNNNTTGG	2 cut(s)	434, 466
AleI	CACNNNNGTG	1 cut(s)	1937
AluBI	AGCT	9 cut(s)	33, 210, 332, 671, 696, 722, 969, 1300, 2188
AluI	AGCT	9 cut(s)	33, 210, 332, 671, 696, 722, 969, 1300, 2188
Alw21I	GWGCWC	3 cut(s)	35, 212, 1838
Alw26I	GTCTC	8 cut(s)	554, 565, 677, 804, 1015, 1155, 1191, 1776
AlwI	GGATC	3 cut(s)	992, 2159, 2363
Aor13HI	TCCGGA	1 cut(s)	1436
Aor51HI	AGCGCT	1 cut(s)	1236
AoxI	GGCC	9 cut(s)	183, 199, 757, 1089, 1627, 1710, 2011, 2025, 2159
ApaI	GGGCCC	1 cut(s)	1714
ApeKI	GCWGC	3 cut(s)	25, 1232, 1363
ApoI	RAATTY	7 cut(s)	251, 350, 542, 816, 1467, 2074, 2111
ArsI	GACNNNNNNTTYG	2 cut(s)	866, 898
AsiGI	ACCGGT	1 cut(s)	647
Asp700I	GAANNNNTTC	1 cut(s)	1644
AspLEI	GCGC	2 cut(s)	1237, 1363
AspS9I	GGNCC	5 cut(s)	758, 1328, 1710, 1711, 2025
AsuC2I	CCSGG	2 cut(s)	378, 425
AsuNHI	GCTAGC	2 cut(s)	308, 1357
AvaII	GGWCC	1 cut(s)	1328
BaeGI	GKGCMC	2 cut(s)	1714, 1811
BalI	TGGCCA	2 cut(s)	1091, 1629
BanI	GGYRCC	1 cut(s)	1808
BanII	GRGCYC	3 cut(s)	35, 212, 1714
Bbv12I	GWGCWC	3 cut(s)	35, 212, 1838
BbvI	GCAGC	3 cut(s)	37, 1244, 1375
BceAI	ACGGC	1 cut(s)	280
BcgI	CGANNNNNNTGC	2 cut(s)	279, 313
BciT130I	CCWGG	3 cut(s)	182, 1517, 2015
BciVI	GTATCC	1 cut(s)	1775
BclI	TGATCA	2 cut(s)	2056, 2271
BcnI	CCSGG	2 cut(s)	378, 425
BcoDI	GTCTC	8 cut(s)	554, 565, 677, 804, 1015, 1155, 1191, 1776
BfaI	CTAG	4 cut(s)	309, 1223, 1358, 1506
BfmI	CTRYAG	1 cut(s)	1238
BfoI	RGCGCY	1 cut(s)	1238
BfuI	GTATCC	1 cut(s)	1775
BisI	GCNGC	6 cut(s)	26, 190, 465, 1233, 1364, 1578
BlsI	GCNGC	6 cut(s)	27, 191, 466, 1234, 1365, 1579
Bme1390I	CCNGG	5 cut(s)	182, 378, 425, 1517, 2015
Bme18I	GGWCC	1 cut(s)	1328
BmgT120I	GGNCC	5 cut(s)	758, 1328, 1710, 1711, 2025
BmiI	GGNNCC	5 cut(s)	760, 1330, 1711, 1712, 1810
BmrFI	CCNGG	5 cut(s)	182, 378, 425, 1517, 2015
BmsI	GCATC	8 cut(s)	281, 592, 1136, 1258, 1614, 1728, 2090, 2196
BmtI	GCTAGC	2 cut(s)	312, 1361
BplI	GAGNNNNNCTC	4 cut(s)	558, 590, 1727, 1759
BpmI	CTGGAG	1 cut(s)	746
BpuEI	CTTGAG	1 cut(s)	1670
BpuMI	CCSGG	2 cut(s)	378, 425
Bsa29I	ATCGAT	1 cut(s)	2367
BsaBI	GATNNNNATC	1 cut(s)	1730
BsaI	GGTCTC	1 cut(s)	677
BsaJI	CCNNGG	4 cut(s)	180, 1516, 1992, 2332
BsaWI	WCCGGW	9 cut(s)	163, 647, 782, 792, 806, 1189, 1436, 1564, 2371
BsaXI	ACNNNNNCTCC	2 cut(s)	719, 749
Bsc4I	CCNNNNNNNGG	4 cut(s)	333, 799, 982, 2334
Bse118I	RCCGGY	3 cut(s)	140, 467, 647
Bse1I	ACTGG	3 cut(s)	917, 1151, 2347
Bse3DI	GCAATG	1 cut(s)	2133
Bse8I	GATNNNNATC	1 cut(s)	1730
BseAI	TCCGGA	1 cut(s)	1436
BseBI	CCWGG	3 cut(s)	182, 1517, 2015
BseCI	ATCGAT	1 cut(s)	2367
BseDI	CCNNGG	4 cut(s)	180, 1516, 1992, 2332
BseJI	GATNNNNATC	1 cut(s)	1730
BseLI	CCNNNNNNNGG	4 cut(s)	333, 799, 982, 2334
BseMI	GCAATG	1 cut(s)	2133
BseNI	ACTGG	3 cut(s)	917, 1151, 2347
BseRI	GAGGAG	2 cut(s)	470, 1514
BseSI	GKGCMC	2 cut(s)	1714, 1811
BseXI	GCAGC	3 cut(s)	37, 1244, 1375
Bsh1236I	CGCG	1 cut(s)	1716
Bsh1285I	CGRYCG	4 cut(s)	168, 708, 1069, 1073
BshFI	GGCC	9 cut(s)	185, 201, 759, 1091, 1629, 1712, 2013, 2027, 2161
BshNI	GGYRCC	1 cut(s)	1808
BshTI	ACCGGT	1 cut(s)	647
BshVI	ATCGAT	1 cut(s)	2367
BsiEI	CGRYCG	4 cut(s)	168, 708, 1069, 1073
BsiHKAI	GWGCWC	3 cut(s)	35, 212, 1838
BsiWI	CGTACG	1 cut(s)	606
BslFI	GGGAC	4 cut(s)	302, 511, 815, 1522
BslI	CCNNNNNNNGG	4 cut(s)	333, 799, 982, 2334
BsmAI	GTCTC	8 cut(s)	554, 565, 677, 804, 1015, 1155, 1191, 1776
BsmBI	CGTCTC	1 cut(s)	804
BsmFI	GGGAC	4 cut(s)	302, 511, 815, 1522
BsnI	GGCC	9 cut(s)	185, 201, 759, 1091, 1629, 1712, 2013, 2027, 2161
Bso31I	GGTCTC	1 cut(s)	677
Bsp120I	GGGCCC	1 cut(s)	1710
Bsp1286I	GDGCHC	5 cut(s)	35, 212, 1714, 1811, 1838
Bsp13I	TCCGGA	1 cut(s)	1436
Bsp143I	GATC	9 cut(s)	705, 997, 1066, 2056, 2151, 2233, 2271, 2361, 2368
BspANI	GGCC	9 cut(s)	185, 201, 759, 1091, 1629, 1712, 2013, 2027, 2161
BspDI	ATCGAT	1 cut(s)	2367
BspEI	TCCGGA	1 cut(s)	1436
BspFNI	CGCG	1 cut(s)	1716
BspLI	GGNNCC	5 cut(s)	760, 1330, 1711, 1712, 1810
BspOI	GCTAGC	2 cut(s)	312, 1361
BspPI	GGATC	3 cut(s)	992, 2159, 2363
BspQI	GCTCTTC	1 cut(s)	1826
BspT107I	GGYRCC	1 cut(s)	1808
BspTNI	GGTCTC	1 cut(s)	677
BsrBI	CCGCTC	1 cut(s)	1134
BsrDI	GCAATG	1 cut(s)	2133
BsrFI	RCCGGY	3 cut(s)	140, 467, 647
BsrI	ACTGG	3 cut(s)	917, 1151, 2347
BssAI	RCCGGY	3 cut(s)	140, 467, 647
BssECI	CCNNGG	4 cut(s)	180, 1516, 1992, 2332
BssMI	GATC	9 cut(s)	705, 997, 1066, 2056, 2151, 2233, 2271, 2361, 2368
BssNAI	GTATAC	1 cut(s)	1254
BssT1I	CCWWGG	1 cut(s)	2332
Bst1107I	GTATAC	1 cut(s)	1254
Bst2UI	CCWGG	3 cut(s)	182, 1517, 2015
Bst4CI	ACNGT	5 cut(s)	1536, 1686, 1787, 1823, 1993
Bst6I	CTCTTC	4 cut(s)	99, 137, 455, 1826
BstC8I	GCNNGC	8 cut(s)	187, 310, 398, 469, 851, 1359, 1714, 2105
BstDEI	CTNAG	2 cut(s)	994, 1803
BstDSI	CCRYGG	1 cut(s)	1992
BstFNI	CGCG	1 cut(s)	1716
BstH2I	RGCGCY	1 cut(s)	1238
BstHHI	GCGC	2 cut(s)	1237, 1363
BstKTI	GATC	9 cut(s)	708, 1000, 1069, 2059, 2154, 2236, 2274, 2364, 2371
BstMAI	GTCTC	8 cut(s)	554, 565, 677, 804, 1015, 1155, 1191, 1776
BstMBI	GATC	9 cut(s)	705, 997, 1066, 2056, 2151, 2233, 2271, 2361, 2368
BstMCI	CGRYCG	4 cut(s)	168, 708, 1069, 1073
BstMWI	GCNNNNNNNGC	4 cut(s)	198, 207, 1363, 2024
BstNI	CCWGG	3 cut(s)	182, 1517, 2015
BstNSI	RCATGY	1 cut(s)	1180
BstSCI	CCNGG	5 cut(s)	180, 376, 423, 1515, 2013
BstSFI	CTRYAG	1 cut(s)	1238
BstSLI	GKGCMC	2 cut(s)	1714, 1811
BstUI	CGCG	1 cut(s)	1716
BstV1I	GCAGC	3 cut(s)	37, 1244, 1375
BstX2I	RGATCY	1 cut(s)	997
BstYI	RGATCY	1 cut(s)	997
BstZ17I	GTATAC	1 cut(s)	1254
Bsu15I	ATCGAT	1 cut(s)	2367
BsuI	GTATCC	1 cut(s)	1775
BsuRI	GGCC	9 cut(s)	185, 201, 759, 1091, 1629, 1712, 2013, 2027, 2161
BsuTUI	ATCGAT	1 cut(s)	2367
BtgI	CCRYGG	1 cut(s)	1992
BtgZI	GCGATG	1 cut(s)	2107
BtsI	GCAGTG	1 cut(s)	2100
BtsIMutI	CAGTG	1 cut(s)	2100
Cac8I	GCNNGC	8 cut(s)	187, 310, 398, 469, 851, 1359, 1714, 2105
CfoI	GCGC	2 cut(s)	1237, 1363
Cfr10I	RCCGGY	3 cut(s)	140, 467, 647
Cfr13I	GGNCC	5 cut(s)	758, 1328, 1710, 1711, 2025
ClaI	ATCGAT	1 cut(s)	2367
CseI	GACGC	1 cut(s)	521
Csp6I	GTAC	6 cut(s)	607, 736, 790, 986, 1430, 1636
CspAI	ACCGGT	1 cut(s)	647
CviQI	GTAC	6 cut(s)	607, 736, 790, 986, 1430, 1636
DdeI	CTNAG	2 cut(s)	994, 1803
DpnI	GATC	9 cut(s)	707, 999, 1068, 2058, 2153, 2235, 2273, 2363, 2370
DpnII	GATC	9 cut(s)	705, 997, 1066, 2056, 2151, 2233, 2271, 2361, 2368
DraI	TTTAAA	1 cut(s)	552
DrdI	GACNNNNNNGTC	1 cut(s)	1534
DseDI	GACNNNNNNGTC	1 cut(s)	1534
EaeI	YGGCCR	4 cut(s)	199, 1089, 1627, 2159
Eam1104I	CTCTTC	4 cut(s)	99, 137, 455, 1826
EarI	CTCTTC	4 cut(s)	99, 137, 455, 1826
EciI	GGCGGA	1 cut(s)	768
Ecl136II	GAGCTC	2 cut(s)	33, 210
Eco130I	CCWWGG	1 cut(s)	2332
Eco24I	GRGCYC	3 cut(s)	35, 212, 1714
Eco31I	GGTCTC	1 cut(s)	677
Eco32I	GATATC	2 cut(s)	241, 1958
Eco47I	GGWCC	1 cut(s)	1328
Eco47III	AGCGCT	1 cut(s)	1236
Eco53kI	GAGCTC	2 cut(s)	33, 210
Eco57I	CTGAAG	1 cut(s)	651
EcoICRI	GAGCTC	2 cut(s)	33, 210
EcoO109I	RGGNCCY	2 cut(s)	758, 1710
EcoRI	GAATTC	1 cut(s)	542
EcoRII	CCWGG	3 cut(s)	180, 1515, 2013
EcoRV	GATATC	2 cut(s)	241, 1958
EcoT14I	CCWWGG	1 cut(s)	2332
EcoT38I	GRGCYC	3 cut(s)	35, 212, 1714
ErhI	CCWWGG	1 cut(s)	2332
Esp3I	CGTCTC	1 cut(s)	804
FalI	AAGNNNNNCTT	2 cut(s)	1632, 1664
FaqI	GGGAC	4 cut(s)	302, 511, 815, 1522
FauI	CCCGC	2 cut(s)	537, 1721
FbaI	TGATCA	2 cut(s)	2056, 2271
FblI	GTMKAC	2 cut(s)	168, 1253
Fnu4HI	GCNGC	6 cut(s)	26, 190, 465, 1233, 1364, 1578
FriOI	GRGCYC	3 cut(s)	35, 212, 1714
Fsp4HI	GCNGC	6 cut(s)	26, 190, 465, 1233, 1364, 1578
FspBI	CTAG	4 cut(s)	309, 1223, 1358, 1506
GlaI	GCGC	2 cut(s)	1236, 1362
GluI	GCNGC	6 cut(s)	26, 190, 465, 1233, 1364, 1578
GsuI	CTGGAG	1 cut(s)	746
HaeII	RGCGCY	1 cut(s)	1238
HaeIII	GGCC	9 cut(s)	185, 201, 759, 1091, 1629, 1712, 2013, 2027, 2161
HgaI	GACGC	1 cut(s)	521
HhaI	GCGC	2 cut(s)	1237, 1363
Hin6I	GCGC	2 cut(s)	1235, 1361
HinP1I	GCGC	2 cut(s)	1235, 1361
HincII	GTYRAC	4 cut(s)	169, 1213, 1527, 2340
HindII	GTYRAC	4 cut(s)	169, 1213, 1527, 2340
HpaI	GTTAAC	1 cut(s)	1213
Hpy188I	TCNGA	8 cut(s)	21, 277, 539, 705, 1048, 1879, 1955, 2359
Hpy99I	CGWCG	5 cut(s)	140, 301, 515, 752, 890
HpyAV	CCTTC	7 cut(s)	595, 1482, 1634, 1790, 1936, 2074, 2279
HpyCH4III	ACNGT	5 cut(s)	1536, 1686, 1787, 1823, 1993
HpyCH4IV	ACGT	3 cut(s)	747, 1167, 1523
HpyF10VI	GCNNNNNNNGC	4 cut(s)	198, 207, 1363, 2024
HpyF3I	CTNAG	2 cut(s)	994, 1803
HpySE526I	ACGT	3 cut(s)	747, 1167, 1523
HspAI	GCGC	2 cut(s)	1235, 1361
Kpn2I	TCCGGA	1 cut(s)	1436
KroI	GCCGGC	1 cut(s)	467
KroNI	GCCGGC	1 cut(s)	469
Ksp22I	TGATCA	2 cut(s)	2056, 2271
KspAI	GTTAAC	1 cut(s)	1213
Kzo9I	GATC	9 cut(s)	705, 997, 1066, 2056, 2151, 2233, 2271, 2361, 2368
LguI	GCTCTTC	1 cut(s)	1826
LmnI	GCTCC	6 cut(s)	30, 38, 215, 350, 443, 1136
Lsp1109I	GCAGC	3 cut(s)	37, 1244, 1375
LweI	GCATC	8 cut(s)	281, 592, 1136, 1258, 1614, 1728, 2090, 2196
MaeI	CTAG	4 cut(s)	309, 1223, 1358, 1506
MaeII	ACGT	3 cut(s)	747, 1167, 1523
MaeIII	GTNAC	5 cut(s)	266, 457, 502, 1754, 1984
MalI	GATC	9 cut(s)	707, 999, 1068, 2058, 2153, 2235, 2273, 2363, 2370
MbiI	CCGCTC	1 cut(s)	1134
MboI	GATC	9 cut(s)	705, 997, 1066, 2056, 2151, 2233, 2271, 2361, 2368
MfeI	CAATTG	1 cut(s)	261
MflI	RGATCY	1 cut(s)	997
MhlI	GDGCHC	5 cut(s)	35, 212, 1714, 1811, 1838
MlsI	TGGCCA	2 cut(s)	1091, 1629
MluNI	TGGCCA	2 cut(s)	1091, 1629
MlyI	GAGTC	8 cut(s)	239, 533, 567, 1017, 1301, 1449, 1511, 2016
MmeI	TCCRAC	3 cut(s)	457, 465, 1174
Mox20I	TGGCCA	2 cut(s)	1091, 1629
MroI	TCCGGA	1 cut(s)	1436
MroNI	GCCGGC	1 cut(s)	467
MroXI	GAANNNNTTC	1 cut(s)	1644
MscI	TGGCCA	2 cut(s)	1091, 1629
MseI	TTAA	4 cut(s)	551, 1212, 1478, 1593
MslI	CAYNNNNRTG	8 cut(s)	785, 1032, 1181, 1824, 1937, 2043, 2126, 2243
Msp20I	TGGCCA	2 cut(s)	1091, 1629
MspA1I	CMGCKG	2 cut(s)	28, 532
MspR9I	CCNGG	5 cut(s)	182, 378, 425, 1517, 2015
MssI	GTTTAAAC	1 cut(s)	552
MunI	CAATTG	1 cut(s)	261
MvaI	CCWGG	3 cut(s)	182, 1517, 2015
MvnI	CGCG	1 cut(s)	1716
MwoI	GCNNNNNNNGC	4 cut(s)	198, 207, 1363, 2024
NaeI	GCCGGC	1 cut(s)	469
NciI	CCSGG	2 cut(s)	378, 425
NdeII	GATC	9 cut(s)	705, 997, 1066, 2056, 2151, 2233, 2271, 2361, 2368
NgoMIV	GCCGGC	1 cut(s)	467
NheI	GCTAGC	2 cut(s)	308, 1357
NlaIV	GGNNCC	5 cut(s)	760, 1330, 1711, 1712, 1810
NmeAIII	GCCGAG	1 cut(s)	313
NmuCI	GTSAC	4 cut(s)	457, 502, 1754, 1984
NspI	RCATGY	1 cut(s)	1180
OliI	CACNNNNGTG	1 cut(s)	1937
PciSI	GCTCTTC	1 cut(s)	1826
PcsI	WCGNNNNNNNCGW	1 cut(s)	519
PdiI	GCCGGC	1 cut(s)	469
PdmI	GAANNNNTTC	1 cut(s)	1644
Pfl23II	CGTACG	1 cut(s)	606
PflFI	GACNNNGTC	1 cut(s)	1752
PinAI	ACCGGT	1 cut(s)	647
PkrI	GCNGC	6 cut(s)	27, 191, 466, 1234, 1365, 1579
Ple19I	CGATCG	2 cut(s)	708, 1069
PleI	GAGTC	8 cut(s)	239, 532, 567, 1017, 1301, 1448, 1510, 2015
PmeI	GTTTAAAC	1 cut(s)	552
PpsI	GAGTC	8 cut(s)	239, 532, 567, 1017, 1301, 1448, 1510, 2015
Psp124BI	GAGCTC	2 cut(s)	35, 212
Psp1406I	AACGTT	1 cut(s)	1523
Psp6I	CCWGG	3 cut(s)	180, 1515, 2013
PspGI	CCWGG	3 cut(s)	180, 1515, 2013
PspLI	CGTACG	1 cut(s)	606
PspN4I	GGNNCC	5 cut(s)	760, 1330, 1711, 1712, 1810
PspOMI	GGGCCC	1 cut(s)	1710
PspPI	GGNCC	5 cut(s)	758, 1328, 1710, 1711, 2025
PsuI	RGATCY	1 cut(s)	997
PsyI	GACNNNGTC	1 cut(s)	1752
PvuI	CGATCG	2 cut(s)	708, 1069
RsaI	GTAC	6 cut(s)	608, 737, 791, 987, 1431, 1637
RsaNI	GTAC	6 cut(s)	607, 736, 790, 986, 1430, 1636
RseI	CAYNNNNRTG	8 cut(s)	785, 1032, 1181, 1824, 1937, 2043, 2126, 2243
SacI	GAGCTC	2 cut(s)	35, 212
SalI	GTCGAC	1 cut(s)	167
SapI	GCTCTTC	1 cut(s)	1826
SaqAI	TTAA	4 cut(s)	551, 1212, 1478, 1593
SatI	GCNGC	6 cut(s)	26, 190, 465, 1233, 1364, 1578
Sau3AI	GATC	9 cut(s)	705, 997, 1066, 2056, 2151, 2233, 2271, 2361, 2368
Sau96I	GGNCC	5 cut(s)	758, 1328, 1710, 1711, 2025
SchI	GAGTC	8 cut(s)	239, 533, 567, 1017, 1301, 1449, 1511, 2016
ScrFI	CCNGG	5 cut(s)	182, 378, 425, 1517, 2015
SduI	GDGCHC	5 cut(s)	35, 212, 1714, 1811, 1838
SfaNI	GCATC	8 cut(s)	281, 592, 1136, 1258, 1614, 1728, 2090, 2196
SfcI	CTRYAG	1 cut(s)	1238
SinI	GGWCC	1 cut(s)	1328
SmiMI	CAYNNNNRTG	8 cut(s)	785, 1032, 1181, 1824, 1937, 2043, 2126, 2243
SmlI	CTYRAG	1 cut(s)	1649
SmoI	CTYRAG	1 cut(s)	1649
SspI	AATATT	1 cut(s)	1111
SspMI	CTAG	4 cut(s)	309, 1223, 1358, 1506
SstI	GAGCTC	2 cut(s)	35, 212
StyD4I	CCNGG	5 cut(s)	180, 376, 423, 1515, 2013
StyI	CCWWGG	1 cut(s)	2332
TaaI	ACNGT	5 cut(s)	1536, 1686, 1787, 1823, 1993
TaiI	ACGT	3 cut(s)	750, 1170, 1526
TaqII	GACCGA	2 cut(s)	924, 1059
TatI	WGTACW	1 cut(s)	1429
TauI	GCSGC	3 cut(s)	192, 467, 1580
Tru1I	TTAA	4 cut(s)	551, 1212, 1478, 1593
Tru9I	TTAA	4 cut(s)	551, 1212, 1478, 1593
TscAI	CASTG	1 cut(s)	2100
TseFI	GTSAC	4 cut(s)	457, 502, 1754, 1984
TseI	GCWGC	3 cut(s)	25, 1232, 1363
Tsp45I	GTSAC	4 cut(s)	457, 502, 1754, 1984
TspGWI	ACGGA	3 cut(s)	445, 490, 636
TspRI	CASTG	1 cut(s)	2100
Tth111I	GACNNNGTC	1 cut(s)	1752
VpaK11BI	GGWCC	1 cut(s)	1328
XapI	RAATTY	7 cut(s)	251, 350, 542, 816, 1467, 2074, 2111
XbaI	TCTAGA	1 cut(s)	1222
XceI	RCATGY	1 cut(s)	1180
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2339
XmiI	GTMKAC	2 cut(s)	168, 1253
XmnI	GAANNNNTTC	1 cut(s)	1644
XspI	CTAG	4 cut(s)	309, 1223, 1358, 1506

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.