DNA repair protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G61410 AT3G23100 AT3G23100 |
| fragaria_vesca | FvH4_2g07190 FvH4_2g07190 |
| malus_domestica | MD13G1208000.v1.1 |
| prunus_persica | Prupe.1G031500_v2.0.a1 Prupe.1G031500_v2.0.a1 Prupe.1G031500_v2.0.a1 |
| pyrus_communis | pycom13g18010 |
| rosa_chinensis | RchiOBHm_Chr1g0323991 |
| rosa_laevigata | RLG00000030236 |
| rosa_multiflora | Rmu_sc0001861.1_g000102 Rmu_sc0002529.1_g000031 Rmu_sc0003452.1_g000009 Rmu_sc0005177.1_g000001 Rmu_sc0006175.1_g000019 |
| rosa_roxburghii | Rroxscaffold_160G00433790 Rroxscaffold_2G00104220 Rroxscaffold_4G00325990 Rroxscaffold_4G00328010 Rroxscaffold_4G00328020 |
| rosa_rugosa | Rorug01G0031900 Rorug01G0041300 Rorug03G0294600 |
| rosa_samantha | Rh1AG043800 Rh1AG059000 Rh1BG041300 Rh1CG046300 Rh1CG061100 Rh1DG051000 Rh1DG065200 Rh4BG282000 Rh5AG329500 Rh7AG348000 Rh7CG365400 Rh7CG365500 |
| rosa_wichuraiana | Rw1G003850 Rw1G005060 Rw4G020960 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 98 |
| AclWI | GGATC | 1 cut(s) | 185 |
| AcsI | RAATTY | 1 cut(s) | 44 |
| AgsI | TTSAA | 3 cut(s) | 44, 49, 187 |
| AluBI | AGCT | 4 cut(s) | 56, 70, 82, 200 |
| AluI | AGCT | 4 cut(s) | 56, 70, 82, 200 |
| Alw21I | GWGCWC | 1 cut(s) | 131 |
| Alw26I | GTCTC | 1 cut(s) | 234 |
| AlwI | GGATC | 1 cut(s) | 185 |
| ApoI | RAATTY | 1 cut(s) | 44 |
| Bbv12I | GWGCWC | 1 cut(s) | 131 |
| BccI | CCATC | 1 cut(s) | 226 |
| BcoDI | GTCTC | 1 cut(s) | 234 |
| BfaI | CTAG | 1 cut(s) | 222 |
| BisI | GCNGC | 1 cut(s) | 99 |
| BlsI | GCNGC | 1 cut(s) | 100 |
| BpmI | CTGGAG | 1 cut(s) | 180 |
| BpuEI | CTTGAG | 1 cut(s) | 216 |
| BsaI | GGTCTC | 1 cut(s) | 234 |
| BsaJI | CCNNGG | 1 cut(s) | 207 |
| BseDI | CCNNGG | 1 cut(s) | 207 |
| BseGI | GGATG | 1 cut(s) | 10 |
| BseYI | CCCAGC | 1 cut(s) | 101 |
| BsiHKAI | GWGCWC | 1 cut(s) | 131 |
| BslFI | GGGAC | 1 cut(s) | 89 |
| BsmAI | GTCTC | 1 cut(s) | 234 |
| BsmFI | GGGAC | 1 cut(s) | 89 |
| Bso31I | GGTCTC | 1 cut(s) | 234 |
| Bsp1286I | GDGCHC | 1 cut(s) | 131 |
| Bsp143I | GATC | 1 cut(s) | 190 |
| BspACI | CCGC | 1 cut(s) | 98 |
| BspPI | GGATC | 1 cut(s) | 185 |
| BspTNI | GGTCTC | 1 cut(s) | 234 |
| BssECI | CCNNGG | 1 cut(s) | 207 |
| BssMI | GATC | 1 cut(s) | 190 |
| BssT1I | CCWWGG | 1 cut(s) | 207 |
| Bst6I | CTCTTC | 1 cut(s) | 117 |
| BstDEI | CTNAG | 2 cut(s) | 24, 62 |
| BstF5I | GGATG | 1 cut(s) | 10 |
| BstKTI | GATC | 1 cut(s) | 193 |
| BstMAI | GTCTC | 1 cut(s) | 234 |
| BstMBI | GATC | 1 cut(s) | 190 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 20 |
| BstNSI | RCATGY | 1 cut(s) | 18 |
| BstX2I | RGATCY | 1 cut(s) | 190 |
| BstYI | RGATCY | 1 cut(s) | 190 |
| BtsCI | GGATG | 1 cut(s) | 10 |
| BtsIMutI | CAGTG | 1 cut(s) | 160 |
| CviAII | CATG | 1 cut(s) | 15 |
| CviJI | RGCY | 6 cut(s) | 23, 56, 70, 82, 101, 200 |
| CviKI_1 | RGCY | 6 cut(s) | 23, 56, 70, 82, 101, 200 |
| DdeI | CTNAG | 2 cut(s) | 24, 62 |
| DpnI | GATC | 1 cut(s) | 192 |
| DpnII | GATC | 1 cut(s) | 190 |
| Eam1104I | CTCTTC | 1 cut(s) | 117 |
| EarI | CTCTTC | 1 cut(s) | 117 |
| Eco130I | CCWWGG | 1 cut(s) | 207 |
| Eco31I | GGTCTC | 1 cut(s) | 234 |
| EcoRI | GAATTC | 1 cut(s) | 44 |
| EcoT14I | CCWWGG | 1 cut(s) | 207 |
| EcoT22I | ATGCAT | 1 cut(s) | 16 |
| ErhI | CCWWGG | 1 cut(s) | 207 |
| FaeI | CATG | 1 cut(s) | 18 |
| FaiI | YATR | 3 cut(s) | 16, 150, 176 |
| FaqI | GGGAC | 1 cut(s) | 89 |
| FatI | CATG | 1 cut(s) | 14 |
| Fnu4HI | GCNGC | 1 cut(s) | 99 |
| FokI | GGATG | 1 cut(s) | 17 |
| Fsp4HI | GCNGC | 1 cut(s) | 99 |
| FspBI | CTAG | 1 cut(s) | 222 |
| GluI | GCNGC | 1 cut(s) | 99 |
| GsaI | CCCAGC | 1 cut(s) | 105 |
| GsuI | CTGGAG | 1 cut(s) | 180 |
| Hin1II | CATG | 1 cut(s) | 18 |
| Hpy188III | TCNNGA | 2 cut(s) | 41, 74 |
| HpyCH4V | TGCA | 2 cut(s) | 8, 14 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 20 |
| HpyF3I | CTNAG | 2 cut(s) | 24, 62 |
| Hsp92II | CATG | 1 cut(s) | 18 |
| Kzo9I | GATC | 1 cut(s) | 190 |
| LpnPI | CCDG | 2 cut(s) | 87, 210 |
| MaeI | CTAG | 1 cut(s) | 222 |
| MalI | GATC | 1 cut(s) | 192 |
| MboI | GATC | 1 cut(s) | 190 |
| MboII | GAAGA | 1 cut(s) | 134 |
| MflI | RGATCY | 1 cut(s) | 190 |
| MhlI | GDGCHC | 1 cut(s) | 131 |
| MluCI | AATT | 1 cut(s) | 44 |
| MnlI | CCTC | 4 cut(s) | 112, 204, 214, 237 |
| Mph1103I | ATGCAT | 1 cut(s) | 16 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 20 |
| NdeII | GATC | 1 cut(s) | 190 |
| NlaIII | CATG | 1 cut(s) | 18 |
| NsiI | ATGCAT | 1 cut(s) | 16 |
| NspI | RCATGY | 1 cut(s) | 18 |
| PkrI | GCNGC | 1 cut(s) | 100 |
| PspFI | CCCAGC | 1 cut(s) | 101 |
| PsuI | RGATCY | 1 cut(s) | 190 |
| SatI | GCNGC | 1 cut(s) | 99 |
| Sau3AI | GATC | 1 cut(s) | 190 |
| SduI | GDGCHC | 1 cut(s) | 131 |
| SetI | ASST | 8 cut(s) | 58, 72, 84, 185, 202, 206, 230, 238 |
| SmlI | CTYRAG | 1 cut(s) | 231 |
| SmoI | CTYRAG | 1 cut(s) | 231 |
| Sse9I | AATT | 1 cut(s) | 44 |
| SsiI | CCGC | 1 cut(s) | 98 |
| SspMI | CTAG | 1 cut(s) | 222 |
| StyI | CCWWGG | 1 cut(s) | 207 |
| TaqI | TCGA | 1 cut(s) | 238 |
| TasI | AATT | 1 cut(s) | 44 |
| TauI | GCSGC | 1 cut(s) | 101 |
| TscAI | CASTG | 1 cut(s) | 160 |
| TspRI | CASTG | 1 cut(s) | 160 |
| XapI | RAATTY | 1 cut(s) | 44 |
| XceI | RCATGY | 1 cut(s) | 18 |
| XspI | CTAG | 1 cut(s) | 222 |
| Zsp2I | ATGCAT | 1 cut(s) | 16 |