AT1G69510

Belongs to the endosulfine family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0006518
Physical Location & Seq
Forward (+)
26126304 .. 26128068
1765 bp
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UTR
Exon/CDS
Intron
AT1G69510.2

Sequence Viewer

Length: 414 bp
ATGGAAGACGTGAAAGGGAAGGAGATTATTGATGATGCTCCTATTGACAACAAGGTTTCAGATGAAATGGAGAGTGAGGAAAATGCGATCAAGAAAAAGTATGGAGGATTGTTGCCTAAGAAGATTCCTTTGATATCTAAGGACCATGAACGTGCGTTTTTTGACTCAGCTGATTGGGCTTTAGGCAAGCAAAAAGGACAGAAGCCGAAAGGGCCTTTGGAAGCTCTCCGCCCAAAACTGCAGCCAACCCCGCAACAGCAACCAAGAGCAAGACGAATGGCTTATTCTTCAGGCGAAACTGAAGACACTGAGATTGATAACAACGAAGCTCCGGATGACCAAGCCTGCGCATCAGCTGTGGATAGTACCAATTTAAAGGACGATGGAGGCGCAAAAGACAACATCAAATCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Endosulfine

Protein Analysis

137

Amino Acids

15.1

Weight (kDa)

4.91

Isoelectric Point (pI)

46.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Endosulfine PF04667 21 - 94 3.7e-25 cAMP-regulated phosphoprotein/endosulfine conserved region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 349
AccIII TCCGGA 1 cut(s) 331
AciI CCGC 2 cut(s) 229, 251
AcuI CTGAAG 2 cut(s) 273, 321
AfaI GTAC 1 cut(s) 367
AjiI CACGTC 1 cut(s) 10
AjuI GAANNNNNNNTTGG 2 cut(s) 200, 232
AluBI AGCT 4 cut(s) 170, 224, 329, 356
AluI AGCT 4 cut(s) 170, 224, 329, 356
Aor13HI TCCGGA 1 cut(s) 331
AoxI GGCC 1 cut(s) 212
ApeKI GCWGC 1 cut(s) 241
AspLEI GCGC 2 cut(s) 350, 392
AspS9I GGNCC 2 cut(s) 142, 212
AvaII GGWCC 1 cut(s) 142
BbsI GAAGAC 2 cut(s) 12, 309
BbvI GCAGC 1 cut(s) 253
BccI CCATC 1 cut(s) 377
BfmI CTRYAG 1 cut(s) 239
BglI GCCNNNNNGGC 1 cut(s) 211
BisI GCNGC 1 cut(s) 242
BlsI GCNGC 1 cut(s) 243
Bme18I GGWCC 1 cut(s) 142
BmgBI CACGTC 1 cut(s) 10
BmgT120I GGNCC 2 cut(s) 142, 212
BmsI GCATC 2 cut(s) 25, 359
BpiI GAAGAC 2 cut(s) 12, 309
BsaWI WCCGGW 1 cut(s) 331
BseAI TCCGGA 1 cut(s) 331
BseGI GGATG 1 cut(s) 340
BseMII CTCAG 2 cut(s) 180, 300
BseXI GCAGC 1 cut(s) 253
BshFI GGCC 1 cut(s) 214
BsiSI CCGG 1 cut(s) 332
BsnI GGCC 1 cut(s) 214
Bsp13I TCCGGA 1 cut(s) 331
Bsp143I GATC 1 cut(s) 87
BspACI CCGC 2 cut(s) 229, 251
BspANI GGCC 1 cut(s) 214
BspCNI CTCAG 2 cut(s) 179, 301
BspEI TCCGGA 1 cut(s) 331
BspHI TCATGA 1 cut(s) 410
BspMAI CTGCAG 1 cut(s) 243
BssMI GATC 1 cut(s) 87
BstC8I GCNNGC 2 cut(s) 188, 346
BstDEI CTNAG 4 cut(s) 117, 138, 166, 309
BstF5I GGATG 1 cut(s) 340
BstHHI GCGC 2 cut(s) 350, 392
BstKTI GATC 1 cut(s) 90
BstMBI GATC 1 cut(s) 87
BstMWI GCNNNNNNNGC 3 cut(s) 176, 211, 250
BstSFI CTRYAG 1 cut(s) 239
BstV1I GCAGC 1 cut(s) 253
BstV2I GAAGAC 2 cut(s) 12, 309
BsuRI GGCC 1 cut(s) 214
BtrI CACGTC 1 cut(s) 10
BtsCI GGATG 1 cut(s) 340
BtsIMutI CAGTG 1 cut(s) 306
Cac8I GCNNGC 2 cut(s) 188, 346
CciI TCATGA 1 cut(s) 410
CfoI GCGC 2 cut(s) 350, 392
Cfr13I GGNCC 2 cut(s) 142, 212
Csp6I GTAC 1 cut(s) 366
CviAII CATG 2 cut(s) 146, 411
CviQI GTAC 1 cut(s) 366
DdeI CTNAG 4 cut(s) 117, 138, 166, 309
DpnI GATC 1 cut(s) 89
DpnII GATC 1 cut(s) 87
DraI TTTAAA 1 cut(s) 375
EciI GGCGGA 1 cut(s) 218
Eco32I GATATC 1 cut(s) 135
Eco47I GGWCC 1 cut(s) 142
Eco57I CTGAAG 2 cut(s) 273, 321
EcoO109I RGGNCCY 1 cut(s) 212
EcoRV GATATC 1 cut(s) 135
FaeI CATG 2 cut(s) 149, 414
FaiI YATR 3 cut(s) 102, 147, 412
FatI CATG 2 cut(s) 145, 410
FauI CCCGC 1 cut(s) 258
Fnu4HI GCNGC 1 cut(s) 242
FokI GGATG 1 cut(s) 347
Fsp4HI GCNGC 1 cut(s) 242
FspI TGCGCA 1 cut(s) 349
GlaI GCGC 2 cut(s) 349, 391
GluI GCNGC 1 cut(s) 242
HaeIII GGCC 1 cut(s) 214
HapII CCGG 1 cut(s) 332
HhaI GCGC 2 cut(s) 350, 392
Hin1II CATG 2 cut(s) 149, 414
Hin6I GCGC 2 cut(s) 348, 390
HinP1I GCGC 2 cut(s) 348, 390
HinfI GANTC 2 cut(s) 124, 164
HpaII CCGG 1 cut(s) 332
Hpy188I TCNGA 1 cut(s) 61
Hpy188III TCNNGA 3 cut(s) 91, 332, 411
HpyAV CCTTC 1 cut(s) 13
HpyCH4IV ACGT 2 cut(s) 9, 151
HpyCH4V TGCA 1 cut(s) 241
HpyF10VI GCNNNNNNNGC 3 cut(s) 176, 211, 250
HpyF3I CTNAG 4 cut(s) 117, 138, 166, 309
HpySE526I ACGT 2 cut(s) 9, 151
Hsp92II CATG 2 cut(s) 149, 414
HspAI GCGC 2 cut(s) 348, 390
Kpn2I TCCGGA 1 cut(s) 331
Kzo9I GATC 1 cut(s) 87
LmnI GCTCC 2 cut(s) 43, 334
LpnPI CCDG 3 cut(s) 276, 345, 358
Lsp1109I GCAGC 1 cut(s) 253
LweI GCATC 2 cut(s) 25, 359
MaeII ACGT 2 cut(s) 9, 151
MalI GATC 1 cut(s) 89
MboI GATC 1 cut(s) 87
MboII GAAGA 4 cut(s) 17, 133, 279, 314
MluCI AATT 1 cut(s) 370
MlyI GAGTC 1 cut(s) 158
MnlI CCTC 3 cut(s) 70, 98, 380
MroI TCCGGA 1 cut(s) 331
MseI TTAA 1 cut(s) 374
MslI CAYNNNNRTG 1 cut(s) 150
MspA1I CMGCKG 2 cut(s) 170, 356
MspI CCGG 1 cut(s) 332
MwoI GCNNNNNNNGC 3 cut(s) 176, 211, 250
NdeII GATC 1 cut(s) 87
NlaIII CATG 2 cut(s) 149, 414
NsbI TGCGCA 1 cut(s) 349
PagI TCATGA 1 cut(s) 410
PfeI GAWTC 1 cut(s) 124
PkrI GCNGC 1 cut(s) 243
PleI GAGTC 1 cut(s) 158
PpsI GAGTC 1 cut(s) 158
PspPI GGNCC 2 cut(s) 142, 212
PstI CTGCAG 1 cut(s) 243
PvuII CAGCTG 2 cut(s) 170, 356
RsaI GTAC 1 cut(s) 367
RsaNI GTAC 1 cut(s) 366
RseI CAYNNNNRTG 1 cut(s) 150
SaqAI TTAA 1 cut(s) 374
SatI GCNGC 1 cut(s) 242
Sau3AI GATC 1 cut(s) 87
Sau96I GGNCC 2 cut(s) 142, 212
SchI GAGTC 1 cut(s) 158
SetI ASST 7 cut(s) 12, 57, 154, 172, 226, 331, 358
SfaNI GCATC 2 cut(s) 25, 359
SfcI CTRYAG 1 cut(s) 239
SinI GGWCC 1 cut(s) 142
SmiMI CAYNNNNRTG 1 cut(s) 150
Sse9I AATT 1 cut(s) 370
SsiI CCGC 2 cut(s) 229, 251
TaiI ACGT 2 cut(s) 12, 154
TasI AATT 1 cut(s) 370
TfiI GAWTC 1 cut(s) 124
Tru1I TTAA 1 cut(s) 374
Tru9I TTAA 1 cut(s) 374
TscAI CASTG 1 cut(s) 313
TseI GCWGC 1 cut(s) 241
TspDTI ATGAA 2 cut(s) 78, 162
TspRI CASTG 1 cut(s) 313
VpaK11BI GGWCC 1 cut(s) 142
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.