Rh4AG370200

Belongs to the endosulfine family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4A
OG0006518
Physical Location & Seq
Forward (+)
67791462 .. 67797198
5737 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4AG370200.1

Sequence Viewer

Length: 699 bp
ATGGATATATCACCCTCTGCTTGGTTCACTACTGCTGCCAGCACAGAGCAGTCAGTTCGGTTATATCCCAATCCTTCTGCCATTTTTGTCCCCTCAAACAAAGCAAGAAACTCGCTTCGGTTCTCATATCTCTGCTCTGCATTTCGGCTCCGGTTTTCTCAGGCGGATCTTTCATCAGCTTGTCACCTGTGCCTAGAGCAAAATATGTCGGCTACAAACACGGAGGATGTGAAGGACCAGGAGCTTGCTGATAGTGCTCTCAATAACCAAGGTCACGGTGACAGTGCCGAGCAAGACATAAAAGCTTCAGATGAAAGCCGCGATGAACATCCCATGCCTTCAGTTCAGAAGGAGGAGGAAACAATTAAGAAAAAGTATGGGGGTATTATTCCTAAGAAGCCTCCACTAATATCCAAGGACCATGAGCGGGCTTATTTTGATTCTGCTGATTGGGCATTGGGAAAGGGAGCACATAAGCCGAAAGGACCACTTGAAGCACTCCGCCCAAAGCTGCAGCCTACACCACACCAGCAAGTGCGTTCAAGGCGCGCCTCCTATACACGCGCAGATGATGTTGAAGTAGATGGCGTCAATAACAACACTTTGGAGGAGGAAGTCCAATCCAGCAAAACTGATGTTAGCAGCAGTAACAACACCAGCACAAACACCGCTACTGAGGATGAGAGCCGCCATGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Endosulfine

Protein Analysis

232

Amino Acids

25.74

Weight (kDa)

5.44

Isoelectric Point (pI)

56.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Endosulfine PF04667 113 - 184 1e-23 cAMP-regulated phosphoprotein/endosulfine conserved region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 427
AccII CGCG 3 cut(s) 321, 549, 564
AciI CCGC 6 cut(s) 164, 319, 427, 502, 669, 688
AclWI GGATC 1 cut(s) 174
AcuI CTGAAG 2 cut(s) 291, 324
AcyI GRCGYC 1 cut(s) 588
AfiI CCNNNNNNNGG 2 cut(s) 21, 427
AgsI TTSAA 3 cut(s) 494, 543, 578
AjnI CCWGG 1 cut(s) 237
AluBI AGCT 4 cut(s) 179, 244, 305, 511
AluI AGCT 4 cut(s) 179, 244, 305, 511
Alw21I GWGCWC 2 cut(s) 259, 472
AlwI GGATC 1 cut(s) 174
ApeKI GCWGC 4 cut(s) 35, 511, 514, 642
AscI GGCGCGCC 1 cut(s) 547
AspLEI GCGC 3 cut(s) 549, 551, 566
AspS9I GGNCC 3 cut(s) 235, 418, 485
AsuHPI GGTGA 3 cut(s) 3, 176, 290
AvaII GGWCC 3 cut(s) 235, 418, 485
Bbv12I GWGCWC 2 cut(s) 259, 472
BbvI GCAGC 4 cut(s) 22, 498, 526, 654
BccI CCATC 1 cut(s) 578
BcgI CGANNNNNNTGC 4 cut(s) 38, 72, 93, 127
BciT130I CCWGG 1 cut(s) 239
BfaI CTAG 1 cut(s) 194
BfmI CTRYAG 1 cut(s) 512
BisI GCNGC 6 cut(s) 36, 319, 512, 515, 643, 688
BlsI GCNGC 6 cut(s) 37, 320, 513, 516, 644, 689
Bme1390I CCNGG 1 cut(s) 239
Bme18I GGWCC 3 cut(s) 235, 418, 485
BmgT120I GGNCC 3 cut(s) 235, 418, 485
BmiI GGNNCC 1 cut(s) 149
BmrFI CCNGG 1 cut(s) 239
BsaBI GATNNNNATC 1 cut(s) 327
BsaHI GRCGYC 1 cut(s) 588
BsaJI CCNNGG 2 cut(s) 268, 414
BsaWI WCCGGW 1 cut(s) 150
Bsc4I CCNNNNNNNGG 2 cut(s) 21, 427
Bse8I GATNNNNATC 1 cut(s) 327
BseBI CCWGG 1 cut(s) 239
BseDI CCNNGG 2 cut(s) 268, 414
BseGI GGATG 3 cut(s) 232, 328, 685
BseJI GATNNNNATC 1 cut(s) 327
BseLI CCNNNNNNNGG 2 cut(s) 21, 427
BseMII CTCAG 2 cut(s) 173, 666
BsePI GCGCGC 1 cut(s) 547
BseRI GAGGAG 2 cut(s) 368, 623
BseXI GCAGC 4 cut(s) 22, 498, 526, 654
Bsh1236I CGCG 3 cut(s) 321, 549, 564
BsiHKAI GWGCWC 2 cut(s) 259, 472
BsiSI CCGG 1 cut(s) 151
BslFI GGGAC 1 cut(s) 74
BslI CCNNNNNNNGG 2 cut(s) 21, 427
BsmFI GGGAC 1 cut(s) 74
Bsp1286I GDGCHC 2 cut(s) 259, 472
Bsp143I GATC 1 cut(s) 166
BspACI CCGC 6 cut(s) 164, 319, 427, 502, 669, 688
BspCNI CTCAG 2 cut(s) 172, 667
BspFNI CGCG 3 cut(s) 321, 549, 564
BspLI GGNNCC 1 cut(s) 149
BspMAI CTGCAG 1 cut(s) 516
BspPI GGATC 1 cut(s) 174
BsrBI CCGCTC 1 cut(s) 427
BssECI CCNNGG 2 cut(s) 268, 414
BssHII GCGCGC 1 cut(s) 547
BssMI GATC 1 cut(s) 166
BssNI GRCGYC 1 cut(s) 588
BssT1I CCWWGG 2 cut(s) 268, 414
Bst2UI CCWGG 1 cut(s) 239
Bst4CI ACNGT 2 cut(s) 278, 284
BstACI GRCGYC 1 cut(s) 588
BstC8I GCNNGC 4 cut(s) 40, 246, 429, 549
BstDEI CTNAG 3 cut(s) 159, 393, 675
BstF5I GGATG 3 cut(s) 232, 328, 685
BstFNI CGCG 3 cut(s) 321, 549, 564
BstHHI GCGC 3 cut(s) 549, 551, 566
BstKTI GATC 1 cut(s) 169
BstMBI GATC 1 cut(s) 166
BstMWI GCNNNNNNNGC 3 cut(s) 254, 452, 544
BstNI CCWGG 1 cut(s) 239
BstSCI CCNGG 1 cut(s) 237
BstSFI CTRYAG 1 cut(s) 512
BstUI CGCG 3 cut(s) 321, 549, 564
BstV1I GCAGC 4 cut(s) 22, 498, 526, 654
BstX2I RGATCY 1 cut(s) 166
BstYI RGATCY 1 cut(s) 166
BtgZI GCGATG 1 cut(s) 336
BtsCI GGATG 3 cut(s) 232, 328, 685
BtsIMutI CAGTG 1 cut(s) 289
Cac8I GCNNGC 4 cut(s) 40, 246, 429, 549
CfoI GCGC 3 cut(s) 549, 551, 566
Cfr13I GGNCC 3 cut(s) 235, 418, 485
CseI GACGC 1 cut(s) 577
CviAII CATG 3 cut(s) 334, 422, 692
DdeI CTNAG 3 cut(s) 159, 393, 675
DpnI GATC 1 cut(s) 168
DpnII GATC 1 cut(s) 166
EciI GGCGGA 2 cut(s) 179, 491
Eco130I CCWWGG 2 cut(s) 268, 414
Eco47I GGWCC 3 cut(s) 235, 418, 485
Eco57I CTGAAG 2 cut(s) 291, 324
EcoRII CCWGG 1 cut(s) 237
EcoT14I CCWWGG 2 cut(s) 268, 414
ErhI CCWWGG 2 cut(s) 268, 414
FaeI CATG 3 cut(s) 337, 425, 695
FalI AAGNNNNNCTT 2 cut(s) 474, 506
FaqI GGGAC 1 cut(s) 74
FatI CATG 3 cut(s) 333, 421, 691
FauI CCCGC 1 cut(s) 420
Fnu4HI GCNGC 6 cut(s) 36, 319, 512, 515, 643, 688
FokI GGATG 3 cut(s) 239, 315, 692
Fsp4HI GCNGC 6 cut(s) 36, 319, 512, 515, 643, 688
FspBI CTAG 1 cut(s) 194
GlaI GCGC 3 cut(s) 548, 550, 565
GluI GCNGC 6 cut(s) 36, 319, 512, 515, 643, 688
HapII CCGG 1 cut(s) 151
HgaI GACGC 1 cut(s) 577
HhaI GCGC 3 cut(s) 549, 551, 566
Hin1I GRCGYC 1 cut(s) 588
Hin1II CATG 3 cut(s) 337, 425, 695
Hin6I GCGC 3 cut(s) 547, 549, 564
HinP1I GCGC 3 cut(s) 547, 549, 564
HindIII AAGCTT 1 cut(s) 303
HinfI GANTC 1 cut(s) 440
HpaII CCGG 1 cut(s) 151
HphI GGTGA 3 cut(s) 3, 176, 290
Hpy166II GTNNAC 1 cut(s) 27
Hpy188I TCNGA 2 cut(s) 310, 348
Hpy8I GTNNAC 1 cut(s) 27
HpyAV CCTTC 4 cut(s) 84, 226, 343, 348
HpyCH4III ACNGT 2 cut(s) 278, 284
HpyCH4V TGCA 2 cut(s) 140, 514
HpyF10VI GCNNNNNNNGC 3 cut(s) 254, 452, 544
HpyF3I CTNAG 3 cut(s) 159, 393, 675
Hsp92I GRCGYC 1 cut(s) 588
Hsp92II CATG 3 cut(s) 337, 425, 695
HspAI GCGC 3 cut(s) 547, 549, 564
Kzo9I GATC 1 cut(s) 166
LmnI GCTCC 3 cut(s) 153, 241, 467
LpnPI CCDG 9 cut(s) 52, 146, 164, 200, 224, 251, 542, 637, 670
Lsp1109I GCAGC 4 cut(s) 22, 498, 526, 654
MaeI CTAG 1 cut(s) 194
MaeIII GTNAC 4 cut(s) 182, 272, 278, 647
MalI GATC 1 cut(s) 168
MbiI CCGCTC 1 cut(s) 427
MboI GATC 1 cut(s) 166
MflI RGATCY 1 cut(s) 166
MhlI GDGCHC 2 cut(s) 259, 472
MluCI AATT 1 cut(s) 363
MseI TTAA 1 cut(s) 366
MspI CCGG 1 cut(s) 151
MspR9I CCNGG 1 cut(s) 239
MvaI CCWGG 1 cut(s) 239
MvnI CGCG 3 cut(s) 321, 549, 564
MwoI GCNNNNNNNGC 3 cut(s) 254, 452, 544
NdeII GATC 1 cut(s) 166
NlaIII CATG 3 cut(s) 337, 425, 695
NlaIV GGNNCC 1 cut(s) 149
NmeAIII GCCGAG 1 cut(s) 313
NmuCI GTSAC 3 cut(s) 182, 272, 278
PalAI GGCGCGCC 1 cut(s) 547
PauI GCGCGC 1 cut(s) 547
PfeI GAWTC 1 cut(s) 440
PkrI GCNGC 6 cut(s) 37, 320, 513, 516, 644, 689
Psp6I CCWGG 1 cut(s) 237
PspGI CCWGG 1 cut(s) 237
PspN4I GGNNCC 1 cut(s) 149
PspPI GGNCC 3 cut(s) 235, 418, 485
PstI CTGCAG 1 cut(s) 516
PsuI RGATCY 1 cut(s) 166
PteI GCGCGC 1 cut(s) 547
SaqAI TTAA 1 cut(s) 366
SatI GCNGC 6 cut(s) 36, 319, 512, 515, 643, 688
Sau3AI GATC 1 cut(s) 166
Sau96I GGNCC 3 cut(s) 235, 418, 485
ScrFI CCNGG 1 cut(s) 239
SduI GDGCHC 2 cut(s) 259, 472
SetI ASST 6 cut(s) 181, 189, 246, 274, 307, 513
SfcI CTRYAG 1 cut(s) 512
SgsI GGCGCGCC 1 cut(s) 547
SinI GGWCC 3 cut(s) 235, 418, 485
Sse9I AATT 1 cut(s) 363
SsiI CCGC 6 cut(s) 164, 319, 427, 502, 669, 688
SspMI CTAG 1 cut(s) 194
StyD4I CCNGG 1 cut(s) 237
StyI CCWWGG 2 cut(s) 268, 414
TaaI ACNGT 2 cut(s) 278, 284
TasI AATT 1 cut(s) 363
TauI GCSGC 2 cut(s) 321, 690
TfiI GAWTC 1 cut(s) 440
Tru1I TTAA 1 cut(s) 366
Tru9I TTAA 1 cut(s) 366
TscAI CASTG 1 cut(s) 289
TseFI GTSAC 3 cut(s) 182, 272, 278
TseI GCWGC 4 cut(s) 35, 511, 514, 642
Tsp45I GTSAC 3 cut(s) 182, 272, 278
TspDTI ATGAA 3 cut(s) 162, 327, 339
TspGWI ACGGA 1 cut(s) 236
TspRI CASTG 1 cut(s) 289
VpaK11BI GGWCC 3 cut(s) 235, 418, 485
XspI CTAG 1 cut(s) 194
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.