Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0003554

Physical Location & Seq

Genomic Coordinates Reverse (-)

27464528 .. 27466348

Gene Structure 1821 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G73010.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 888 bp

ATGGCTTACAATAGCAATAGCAATAACAACAACAACAACATTGTCGTTGTTTTCGACTTCGACAAGACCATCATCGACGTTGATAGCGATAATTGGGTAATCGATGAACTTGGCTTCACTGATTTGTTCAATCAACTTCTCCCCACCATGCCTTGGAACACACTCATGGACCGTATGATGAAGGAGCTTCATGATCAAGGCAAAACCATTGAGGAGATCAAACAAGTCTTGAGAACAATCCCAATTCATCCACGTGTCGTCCCTGCCATCAAATCTGCACATGATTTAGGGTGTGAGCTTAGGATAGTGAGCGATGCAAACATGTTTTTCATCGAGACCATCGTTGAACATCTCGGAATTAGCGAACTCTTCTCTGAGATCAACTCGAACCCAGGATATGTCGATGAACGTGGCACATTGAAAATCTCTCCCTACCACGACTTCACTAAATCCCCTCATAGCTGCTCTTGTGGCACTTGCCCTCCTAACATGTGCAAGGGTTTGATCATTGAGAGGATTCAACAATCTTTAGCTAAAGAAGGGAAGAAGAAAATGATCTATCTAGGAGATGGAGCTGGCGATTACTGTCCAAGTTTGAAACTAAACACTGAAGATTACGTGATGCCACGTAAGAATTTCCCTGTATGGGATCTAATTAGTCAAAATCCAATGCTGATTAAAGCAGCGATTAGAGAATGGACCGATGGCCAAAGCATGGAGATGATATTGATAGGAACGATCGAGGAGATTAGATTGGAGGAAGAGAAGGAGAAGATGTTGACTAGTGCGGAGAATAATTGCAAGATGCAGACCATCTCTATCGGGATTAATAATGTTCATCATGAACCAATATTGCCTCGTGCTCTTCGTGTGTCTCAGTCTAGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003993 GO:0004427 GO:0006725 GO:0006732 GO:0006790 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0008150 GO:0008152 GO:0009058 GO:0009108 GO:0009229 GO:0009267 GO:0009605 GO:0009987 GO:0009991 GO:0016036 GO:0016043 GO:0016311 GO:0016462 GO:0016787 GO:0016788 GO:0016791 GO:0016817 GO:0016818 GO:0018130 GO:0019438 GO:0019637 GO:0022607 GO:0031667 GO:0031668 GO:0031669 GO:0033554 GO:0034641 GO:0042131 GO:0042357 GO:0042578 GO:0042594 GO:0043933 GO:0044085 GO:0044237 GO:0044249 GO:0044271 GO:0044272 GO:0046483 GO:0050896 GO:0051186 GO:0051188 GO:0051259 GO:0051262 GO:0051716 GO:0052731 GO:0052732 GO:0065003 GO:0071496 GO:0071704 GO:0071840 GO:0072527 GO:0072528 GO:0090407 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00564 ko00750 ko01100 map00564 map00750 map01100

Pfam Domains

Protein Families

Put_Phosphatase

Protein Analysis

295

Amino Acids

33.52

Weight (kDa)

5.16

Isoelectric Point (pI)

45.5

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Put_Phosphatase	PF06888	14 - 246	1e-100	Putative Phosphatase
HAD	PF12710	16 - 194	3.7e-08	haloacid dehalogenase-like hydrolase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003554)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17710 AT1G17710 AT1G73010
fragaria_vesca	FvH4_1g29940 FvH4_6g33030 FvH4_6g33030
malus_domestica	MD09G1195300.v1.1 MD17G1175900.v1.1
prunus_persica	Prupe.3G051900_v2.0.a1 Prupe.3G052000_v2.0.a1
pyrus_communis	pycom09g11220
rosa_chinensis	RchiOBHm_Chr2g0142571 RchiOBHm_Chr3g0492381
rosa_laevigata	RLG00000019970 RLG00000022771 RLG00000028003
rosa_multiflora	Rmu_sc0000482.1_g000010 Rmu_sc0003156.1_g000017 Rmu_sc0038448.1_g000002 Rmu_ssc0000399.1_g000024
rosa_roxburghii	Rroxscaffold_2G00102490 Rroxscaffold_6G00392350
rosa_rugosa	Rorug02G0374200 Rorug03G0253500
rosa_samantha	Rh2AG426000 Rh2BG435600 Rh2CG412600 Rh3AG303700 Rh3BG339700 Rh3CG336900 Rh3DG338800
rosa_wichuraiana	Rw0G001610 Rw1G024260 Rw2G034910 Rw3G026780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	153, 715
AciI	CCGC	1 cut(s)	788
AclWI	GGATC	1 cut(s)	657
AcoI	YGGCCR	1 cut(s)	706
AcsI	RAATTY	1 cut(s)	634
AcuI	CTGAAG	1 cut(s)	630
AcvI	CACGTG	1 cut(s)	254
AfiI	CCNNNNNNNGG	3 cut(s)	153, 646, 715
AflIII	ACRYGT	3 cut(s)	253, 321, 489
AgsI	TTSAA	5 cut(s)	130, 347, 421, 521, 598
AhlI	ACTAGT	1 cut(s)	782
AjnI	CCWGG	1 cut(s)	391
AluBI	AGCT	5 cut(s)	187, 298, 462, 533, 575
AluI	AGCT	5 cut(s)	187, 298, 462, 533, 575
Alw21I	GWGCWC	1 cut(s)	865
Alw26I	GTCTC	2 cut(s)	329, 879
AlwI	GGATC	1 cut(s)	657
AoxI	GGCC	1 cut(s)	706
ApeKI	GCWGC	2 cut(s)	462, 683
ApoI	RAATTY	1 cut(s)	634
AseI	ATTAAT	1 cut(s)	828
AspS9I	GGNCC	2 cut(s)	169, 699
AvaII	GGWCC	2 cut(s)	169, 699
BalI	TGGCCA	1 cut(s)	708
BauI	CACGAG	1 cut(s)	858
BbrPI	CACGTG	1 cut(s)	254
Bbv12I	GWGCWC	1 cut(s)	865
BbvI	GCAGC	2 cut(s)	449, 695
BccI	CCATC	6 cut(s)	77, 275, 347, 563, 698, 821
BciT130I	CCWGG	1 cut(s)	393
BclI	TGATCA	2 cut(s)	193, 504
BcoDI	GTCTC	2 cut(s)	329, 879
BcuI	ACTAGT	1 cut(s)	782
BfaI	CTAG	3 cut(s)	563, 783, 882
BisI	GCNGC	2 cut(s)	463, 684
BlsI	GCNGC	2 cut(s)	464, 685
Bme1390I	CCNGG	1 cut(s)	393
Bme18I	GGWCC	2 cut(s)	169, 699
BmgT120I	GGNCC	2 cut(s)	169, 699
BmrFI	CCNGG	1 cut(s)	393
BmsI	GCATC	3 cut(s)	304, 612, 795
BplI	GAGNNNNNCTC	2 cut(s)	368, 400
Bpu10I	CCTNAGC	1 cut(s)	299
BpuEI	CTTGAG	1 cut(s)	250
Bsa29I	ATCGAT	1 cut(s)	102
BsaAI	YACGTR	3 cut(s)	254, 619, 629
BsaI	GGTCTC	1 cut(s)	329
BsaJI	CCNNGG	2 cut(s)	152, 391
BsaXI	ACNNNNNCTCC	4 cut(s)	466, 496, 761, 791
Bsc4I	CCNNNNNNNGG	3 cut(s)	153, 646, 715
BseBI	CCWGG	1 cut(s)	393
BseCI	ATCGAT	1 cut(s)	102
BseDI	CCNNGG	2 cut(s)	152, 391
BseGI	GGATG	1 cut(s)	247
BseLI	CCNNNNNNNGG	3 cut(s)	153, 646, 715
BseMII	CTCAG	1 cut(s)	366
BseRI	GAGGAG	2 cut(s)	227, 758
BseXI	GCAGC	2 cut(s)	449, 695
BsgI	GTGCAG	1 cut(s)	261
Bsh1285I	CGRYCG	1 cut(s)	741
BshFI	GGCC	1 cut(s)	708
BshVI	ATCGAT	1 cut(s)	102
BsiEI	CGRYCG	1 cut(s)	741
BsiHKAI	GWGCWC	1 cut(s)	865
BslFI	GGGAC	1 cut(s)	245
BslI	CCNNNNNNNGG	3 cut(s)	153, 646, 715
BsmAI	GTCTC	2 cut(s)	329, 879
BsmFI	GGGAC	1 cut(s)	245
BsnI	GGCC	1 cut(s)	708
Bso31I	GGTCTC	1 cut(s)	329
Bsp1286I	GDGCHC	1 cut(s)	865
Bsp143I	GATC	7 cut(s)	193, 216, 378, 504, 555, 649, 738
BspACI	CCGC	1 cut(s)	788
BspANI	GGCC	1 cut(s)	708
BspCNI	CTCAG	1 cut(s)	367
BspDI	ATCGAT	1 cut(s)	102
BspHI	TCATGA	2 cut(s)	190, 841
BspPI	GGATC	1 cut(s)	657
BspQI	GCTCTTC	1 cut(s)	870
BspTNI	GGTCTC	1 cut(s)	329
BssECI	CCNNGG	2 cut(s)	152, 391
BssMI	GATC	7 cut(s)	193, 216, 378, 504, 555, 649, 738
BssSI	CACGAG	1 cut(s)	858
BssT1I	CCWWGG	1 cut(s)	152
Bst2BI	CACGAG	1 cut(s)	858
Bst2UI	CCWGG	1 cut(s)	393
Bst4CI	ACNGT	2 cut(s)	173, 587
Bst6I	CTCTTC	3 cut(s)	374, 756, 870
BstBAI	YACGTR	3 cut(s)	254, 619, 629
BstC8I	GCNNGC	1 cut(s)	577
BstDEI	CTNAG	3 cut(s)	299, 375, 876
BstF5I	GGATG	1 cut(s)	247
BstKTI	GATC	7 cut(s)	196, 219, 381, 507, 558, 652, 741
BstMAI	GTCTC	2 cut(s)	329, 879
BstMBI	GATC	7 cut(s)	193, 216, 378, 504, 555, 649, 738
BstMCI	CGRYCG	1 cut(s)	741
BstMWI	GCNNNNNNNGC	1 cut(s)	471
BstNI	CCWGG	1 cut(s)	393
BstNSI	RCATGY	2 cut(s)	325, 493
BstSCI	CCNGG	1 cut(s)	391
BstV1I	GCAGC	2 cut(s)	449, 695
BstX2I	RGATCY	1 cut(s)	649
BstYI	RGATCY	1 cut(s)	649
Bsu15I	ATCGAT	1 cut(s)	102
BsuRI	GGCC	1 cut(s)	708
BsuTUI	ATCGAT	1 cut(s)	102
BtgZI	GCGATG	1 cut(s)	327
BtsCI	GGATG	1 cut(s)	247
BtsIMutI	CAGTG	2 cut(s)	117, 606
Cac8I	GCNNGC	1 cut(s)	577
CciI	TCATGA	2 cut(s)	190, 841
Cfr13I	GGNCC	2 cut(s)	169, 699
ClaI	ATCGAT	1 cut(s)	102
CviAII	CATG	8 cut(s)	148, 166, 191, 281, 322, 490, 715, 842
CviJI	RGCY	8 cut(s)	5, 114, 187, 298, 462, 533, 575, 708
CviKI_1	RGCY	8 cut(s)	5, 114, 187, 298, 462, 533, 575, 708
DdeI	CTNAG	3 cut(s)	299, 375, 876
DpnI	GATC	7 cut(s)	195, 218, 380, 506, 557, 651, 740
DpnII	GATC	7 cut(s)	193, 216, 378, 504, 555, 649, 738
EaeI	YGGCCR	1 cut(s)	706
Eam1104I	CTCTTC	3 cut(s)	374, 756, 870
EarI	CTCTTC	3 cut(s)	374, 756, 870
Eco130I	CCWWGG	1 cut(s)	152
Eco31I	GGTCTC	1 cut(s)	329
Eco47I	GGWCC	2 cut(s)	169, 699
Eco57I	CTGAAG	1 cut(s)	630
Eco72I	CACGTG	1 cut(s)	254
EcoRII	CCWGG	1 cut(s)	391
EcoT14I	CCWWGG	1 cut(s)	152
ErhI	CCWWGG	1 cut(s)	152
FaeI	CATG	8 cut(s)	151, 169, 194, 284, 325, 493, 718, 845
FaqI	GGGAC	1 cut(s)	245
FatI	CATG	8 cut(s)	147, 165, 190, 280, 321, 489, 714, 841
FbaI	TGATCA	2 cut(s)	193, 504
Fnu4HI	GCNGC	2 cut(s)	463, 684
FokI	GGATG	1 cut(s)	234
Fsp4HI	GCNGC	2 cut(s)	463, 684
FspBI	CTAG	3 cut(s)	563, 783, 882
GluI	GCNGC	2 cut(s)	463, 684
HaeIII	GGCC	1 cut(s)	708
Hin1II	CATG	8 cut(s)	151, 169, 194, 284, 325, 493, 718, 845
HincII	GTYRAC	1 cut(s)	780
HindII	GTYRAC	1 cut(s)	780
HinfI	GANTC	1 cut(s)	517
Hpy166II	GTNNAC	1 cut(s)	780
Hpy188I	TCNGA	2 cut(s)	356, 376
Hpy188III	TCNNGA	5 cut(s)	191, 229, 334, 823, 842
Hpy8I	GTNNAC	1 cut(s)	780
Hpy99I	CGWCG	1 cut(s)	80
HpyAV	CCTTC	3 cut(s)	175, 533, 760
HpyCH4III	ACNGT	2 cut(s)	173, 587
HpyCH4IV	ACGT	5 cut(s)	78, 253, 409, 618, 628
HpyCH4V	TGCA	5 cut(s)	278, 317, 495, 801, 808
HpyF10VI	GCNNNNNNNGC	1 cut(s)	471
HpyF3I	CTNAG	3 cut(s)	299, 375, 876
HpySE526I	ACGT	5 cut(s)	78, 253, 409, 618, 628
Hsp92II	CATG	8 cut(s)	151, 169, 194, 284, 325, 493, 718, 845
Ksp22I	TGATCA	2 cut(s)	193, 504
Kzo9I	GATC	7 cut(s)	193, 216, 378, 504, 555, 649, 738
LguI	GCTCTTC	1 cut(s)	870
LmnI	GCTCC	2 cut(s)	184, 572
LpnPI	CCDG	5 cut(s)	276, 378, 405, 561, 654
Lsp1109I	GCAGC	2 cut(s)	449, 695
LweI	GCATC	3 cut(s)	304, 612, 795
MaeI	CTAG	3 cut(s)	563, 783, 882
MaeII	ACGT	5 cut(s)	78, 253, 409, 618, 628
MalI	GATC	7 cut(s)	195, 218, 380, 506, 557, 651, 740
MboI	GATC	7 cut(s)	193, 216, 378, 504, 555, 649, 738
MboII	GAAGA	7 cut(s)	361, 556, 559, 623, 773, 784, 857
MflI	RGATCY	1 cut(s)	649
MhlI	GDGCHC	1 cut(s)	865
MlsI	TGGCCA	1 cut(s)	708
MluCI	AATT	6 cut(s)	91, 243, 357, 634, 654, 796
MluNI	TGGCCA	1 cut(s)	708
MnlI	CCTC	7 cut(s)	205, 465, 492, 507, 736, 751, 867
Mox20I	TGGCCA	1 cut(s)	708
MscI	TGGCCA	1 cut(s)	708
MseI	TTAA	2 cut(s)	678, 828
MslI	CAYNNNNRTG	3 cut(s)	164, 252, 719
Msp20I	TGGCCA	1 cut(s)	708
MspR9I	CCNGG	1 cut(s)	393
MvaI	CCWGG	1 cut(s)	393
MwoI	GCNNNNNNNGC	1 cut(s)	471
NdeII	GATC	7 cut(s)	193, 216, 378, 504, 555, 649, 738
NlaIII	CATG	8 cut(s)	151, 169, 194, 284, 325, 493, 718, 845
NspI	RCATGY	2 cut(s)	325, 493
PagI	TCATGA	2 cut(s)	190, 841
PciI	ACATGT	2 cut(s)	321, 489
PciSI	GCTCTTC	1 cut(s)	870
PcsI	WCGNNNNNNNCGW	5 cut(s)	51, 84, 339, 360, 865
PfeI	GAWTC	1 cut(s)	517
PflMI	CCANNNNNTGG	2 cut(s)	153, 715
PkrI	GCNGC	2 cut(s)	464, 685
Ple19I	CGATCG	1 cut(s)	741
PmaCI	CACGTG	1 cut(s)	254
PmlI	CACGTG	1 cut(s)	254
Ppu21I	YACGTR	3 cut(s)	254, 619, 629
PscI	ACATGT	2 cut(s)	321, 489
PshBI	ATTAAT	1 cut(s)	828
Psp6I	CCWGG	1 cut(s)	391
PspCI	CACGTG	1 cut(s)	254
PspGI	CCWGG	1 cut(s)	391
PspPI	GGNCC	2 cut(s)	169, 699
PsuI	RGATCY	1 cut(s)	649
PvuI	CGATCG	1 cut(s)	741
RseI	CAYNNNNRTG	3 cut(s)	164, 252, 719
SapI	GCTCTTC	1 cut(s)	870
SaqAI	TTAA	2 cut(s)	678, 828
SatI	GCNGC	2 cut(s)	463, 684
Sau3AI	GATC	7 cut(s)	193, 216, 378, 504, 555, 649, 738
Sau96I	GGNCC	2 cut(s)	169, 699
ScrFI	CCNGG	1 cut(s)	393
SduI	GDGCHC	1 cut(s)	865
SfaNI	GCATC	3 cut(s)	304, 612, 795
SinI	GGWCC	2 cut(s)	169, 699
SmiMI	CAYNNNNRTG	3 cut(s)	164, 252, 719
SmlI	CTYRAG	1 cut(s)	229
SmoI	CTYRAG	1 cut(s)	229
SpeI	ACTAGT	1 cut(s)	782
Sse9I	AATT	6 cut(s)	91, 243, 357, 634, 654, 796
SsiI	CCGC	1 cut(s)	788
SspI	AATATT	1 cut(s)	852
SspMI	CTAG	3 cut(s)	563, 783, 882
StyD4I	CCNGG	1 cut(s)	391
StyI	CCWWGG	1 cut(s)	152
TaaI	ACNGT	2 cut(s)	173, 587
TaiI	ACGT	5 cut(s)	81, 256, 412, 621, 631
TaqI	TCGA	8 cut(s)	54, 60, 75, 102, 333, 386, 402, 741
TaqII	GACCGA	1 cut(s)	716
TasI	AATT	6 cut(s)	91, 243, 357, 634, 654, 796
TfiI	GAWTC	1 cut(s)	517
Tru1I	TTAA	2 cut(s)	678, 828
Tru9I	TTAA	2 cut(s)	678, 828
TscAI	CASTG	2 cut(s)	124, 613
TseI	GCWGC	2 cut(s)	462, 683
TspDTI	ATGAA	8 cut(s)	120, 179, 194, 236, 319, 420, 827, 858
TspRI	CASTG	2 cut(s)	124, 613
Van91I	CCANNNNNTGG	2 cut(s)	153, 715
VpaK11BI	GGWCC	2 cut(s)	169, 699
VspI	ATTAAT	1 cut(s)	828
XapI	RAATTY	1 cut(s)	634
XceI	RCATGY	2 cut(s)	325, 493
XspI	CTAG	3 cut(s)	563, 783, 882

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.