Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0003603

Physical Location & Seq

Genomic Coordinates Forward (+)

8262696 .. 8265138

Gene Structure 2443 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G19080.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 948 bp

ATGGAAGGCGATCAAGAGACGAATGTTTATACTTTGGTGGCAAGGAAGCCTTCCTTCGATCTCCCAACAGCTTGCCCTAATTGTCTTCCTGCTTATATATACCTGAAATTAGCCCAGCTACCTTTTGAACTTGCGTTCAATTCAACCTTCCCTGATTCAGATGAACTGCCGTACTTTGAAAGTGATACATATGTTGCATATAACAATGAAGATGGAGGAGTAATTGAAAAACTGAAGAAAGATGGGATTGTTAATCTGGACTCTCAGCTACAGTCTCTTTCGGATTATTTATCTTTGAAGGCTCTTATTGTGTCTTGGCTAGAAGAAGCGCTTACCTATGAGATATGGGTTGGTACCGAGGGGATATCTACATCGAAAATCTACTATTCAGATCTTCCTTGGGTGATCAGCAAGGTCCTGTTTTATAAGCAGACATACTTGGCAAAGAACCGTTTAGGAATCACCAAAGAGAACGCAGAGCAAAGAGAAAAACAGATATACAAGAGAGCAAGTGAGGCATATGAAGCTTTGTCGACTAGGTTAGGTGAGCAGAAGTTTCTCTTTGAAGACAGGCCATCGAGTTTGGATGCTTTCTTACTCTCGCACATACTTTTTATAATCCAAGCGTTACCAGTTACATCAGTGCTTCGGTGCAAACTTCTGGAACATAGTAATCTTGTGCGATATGCTGAGAAACTTAAGTCAGAGTTCCTTGAAGCCTCTTCTTCATCTCCTTCACCTCCACTTCACTCATTCCCTTCCTCATTTCCAAGAAAGAGTTCGAAGCCAAAGAGCAAACCAAAGGTAGAAAAGACCGAAGAGGAGAAAAAATTTAAGAAAAGAGCAAGGTTCTTTCTAGCTGCTCAGTTTCTAGCTGTCGTCATTTACGTATCAGTGATGGGAGGAGGTAGTTCTGATGAACTGGAGTATGAAGATGAAGATGACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005741 GO:0005743 GO:0006605 GO:0006626 GO:0006810 GO:0006839 GO:0006886 GO:0006996 GO:0007005 GO:0008104 GO:0008150 GO:0009536 GO:0009987 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0019866 GO:0019867 GO:0031090 GO:0031966 GO:0031967 GO:0031968 GO:0031975 GO:0033036 GO:0033365 GO:0034613 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0070585 GO:0070727 GO:0071702 GO:0071705 GO:0071840 GO:0072594 GO:0072655 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GST_C_6 GST_N_4

Protein Analysis

315

Amino Acids

35.85

Weight (kDa)

5.23

Isoelectric Point (pI)

47.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GST_N_4	PF17172	26 - 120	2.3e-16	Glutathione S-transferase N-terminal domain
GST_C_6	PF17171	170 - 232	2.1e-16	Glutathione S-transferase, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

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Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0003603)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G19080 AT2G19080
fragaria_vesca	FvH4_4g07590 FvH4_4g07590 FvH4_4g07590 FvH4_4g07590 FvH4_4g07590 FvH4_4g07590 FvH4_4g07590
malus_domestica	MD13G1245600.v1.1
prunus_persica	Prupe.1G079200_v2.0.a1
pyrus_communis	pycom13g21680 pycom16g21400
rosa_chinensis	RchiOBHm_Chr4g0400191 RchiOBHm_Chr7g0191431 RchiOBHm_Chr7g0191541
rosa_laevigata	RLG00000004440 RLG00000009205
rosa_multiflora	Rmu_co8142490.1_g000001 Rmu_sc0000037.1_g000022 Rmu_sc0002661.1_g000008 Rmu_sc0003634.1_g000010 Rmu_sc0010599.1_g000007
rosa_roxburghii	Rroxscaffold_5G00345140
rosa_rugosa	Rorug04G0023500 Rorug04G0023600 Rorug04G0023700
rosa_samantha	Rh4AG098800 Rh4BG097100 Rh4CG108300 Rh4DG093800 Rh7AG119100 Rh7CG124100 Rh7DG122200
rosa_wichuraiana	Rw4G008210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	426, 617
Acc65I	GGTACC	1 cut(s)	353
AccB1I	GGYRCC	1 cut(s)	353
AccI	GTMKAC	1 cut(s)	533
AcsI	RAATTY	1 cut(s)	830
AcuI	CTGAAG	1 cut(s)	254
AfaI	GTAC	2 cut(s)	173, 355
AfeI	AGCGCT	1 cut(s)	330
AflII	CTTAAG	1 cut(s)	698
AgsI	TTSAA	8 cut(s)	128, 139, 144, 179, 227, 298, 566, 716
AjuI	GAANNNNNNNTTGG	2 cut(s)	763, 795
AluBI	AGCT	6 cut(s)	71, 118, 268, 527, 860, 875
AluI	AGCT	6 cut(s)	71, 118, 268, 527, 860, 875
Alw26I	GTCTC	2 cut(s)	11, 279
Aor51HI	AGCGCT	1 cut(s)	330
AoxI	GGCC	1 cut(s)	572
ApeKI	GCWGC	1 cut(s)	860
ApoI	RAATTY	1 cut(s)	830
Asp700I	GAANNNNTTC	1 cut(s)	778
Asp718I	GGTACC	1 cut(s)	353
AspLEI	GCGC	1 cut(s)	331
AspS9I	GGNCC	1 cut(s)	415
AsuHPI	GGTGA	4 cut(s)	415, 454, 557, 729
AsuII	TTCGAA	1 cut(s)	782
AvaII	GGWCC	1 cut(s)	415
BaeI	ACNNNNGTAYC	2 cut(s)	177, 210
BanI	GGYRCC	1 cut(s)	353
BbsI	GAAGAC	2 cut(s)	77, 573
BbvI	GCAGC	1 cut(s)	847
BccI	CCATC	4 cut(s)	206, 236, 583, 892
BceAI	ACGGC	1 cut(s)	154
BclI	TGATCA	1 cut(s)	405
BcoDI	GTCTC	2 cut(s)	11, 279
BfaI	CTAG	4 cut(s)	320, 537, 857, 872
BfmI	CTRYAG	1 cut(s)	269
BfoI	RGCGCY	1 cut(s)	332
BfrI	CTTAAG	1 cut(s)	698
BglII	AGATCT	1 cut(s)	391
BisI	GCNGC	1 cut(s)	861
BlsI	GCNGC	1 cut(s)	862
Bme18I	GGWCC	1 cut(s)	415
BmgT120I	GGNCC	1 cut(s)	415
BmiI	GGNNCC	1 cut(s)	355
BmsI	GCATC	1 cut(s)	577
BpiI	GAAGAC	2 cut(s)	77, 573
BpmI	CTGGAG	1 cut(s)	944
Bpu14I	TTCGAA	1 cut(s)	782
BsaAI	YACGTR	1 cut(s)	889
BsaJI	CCNNGG	2 cut(s)	357, 398
Bse1I	ACTGG	2 cut(s)	632, 927
BseDI	CCNNGG	2 cut(s)	357, 398
BseGI	GGATG	1 cut(s)	592
BseMII	CTCAG	3 cut(s)	278, 681, 878
BseNI	ACTGG	2 cut(s)	632, 927
BseRI	GAGGAG	3 cut(s)	231, 836, 918
BseXI	GCAGC	1 cut(s)	847
BseYI	CCCAGC	1 cut(s)	114
BshFI	GGCC	1 cut(s)	574
BshNI	GGYRCC	1 cut(s)	353
BsmAI	GTCTC	2 cut(s)	11, 279
BsmBI	CGTCTC	1 cut(s)	11
BsnI	GGCC	1 cut(s)	574
Bsp119I	TTCGAA	1 cut(s)	782
Bsp143I	GATC	4 cut(s)	10, 58, 391, 405
BspANI	GGCC	1 cut(s)	574
BspCNI	CTCAG	3 cut(s)	277, 682, 877
BspLI	GGNNCC	1 cut(s)	355
BspT104I	TTCGAA	1 cut(s)	782
BspT107I	GGYRCC	1 cut(s)	353
BspTI	CTTAAG	1 cut(s)	698
BsrI	ACTGG	2 cut(s)	632, 927
BssECI	CCNNGG	2 cut(s)	357, 398
BssMI	GATC	4 cut(s)	10, 58, 391, 405
BssT1I	CCWWGG	1 cut(s)	398
Bst4CI	ACNGT	2 cut(s)	273, 452
Bst6I	CTCTTC	2 cut(s)	727, 813
BstAFI	CTTAAG	1 cut(s)	698
BstBAI	YACGTR	1 cut(s)	889
BstBI	TTCGAA	1 cut(s)	782
BstC8I	GCNNGC	1 cut(s)	73
BstDEI	CTNAG	3 cut(s)	264, 690, 864
BstF5I	GGATG	1 cut(s)	592
BstH2I	RGCGCY	1 cut(s)	332
BstHHI	GCGC	1 cut(s)	331
BstKTI	GATC	4 cut(s)	13, 61, 394, 408
BstMAI	GTCTC	2 cut(s)	11, 279
BstMBI	GATC	4 cut(s)	10, 58, 391, 405
BstMWI	GCNNNNNNNGC	2 cut(s)	515, 524
BstSFI	CTRYAG	1 cut(s)	269
BstSNI	TACGTA	1 cut(s)	889
BstV1I	GCAGC	1 cut(s)	847
BstV2I	GAAGAC	2 cut(s)	77, 573
BstX2I	RGATCY	1 cut(s)	391
BstYI	RGATCY	1 cut(s)	391
BsuRI	GGCC	1 cut(s)	574
BtsCI	GGATG	1 cut(s)	592
BtsIMutI	CAGTG	2 cut(s)	648, 900
Cac8I	GCNNGC	1 cut(s)	73
CfoI	GCGC	1 cut(s)	331
Cfr13I	GGNCC	1 cut(s)	415
Csp6I	GTAC	2 cut(s)	172, 354
CviQI	GTAC	2 cut(s)	172, 354
DdeI	CTNAG	3 cut(s)	264, 690, 864
DpnI	GATC	4 cut(s)	12, 60, 393, 407
DpnII	GATC	4 cut(s)	10, 58, 391, 405
Eam1104I	CTCTTC	2 cut(s)	727, 813
EarI	CTCTTC	2 cut(s)	727, 813
Eco105I	TACGTA	1 cut(s)	889
Eco130I	CCWWGG	1 cut(s)	398
Eco32I	GATATC	1 cut(s)	366
Eco47I	GGWCC	1 cut(s)	415
Eco47III	AGCGCT	1 cut(s)	330
Eco57I	CTGAAG	1 cut(s)	254
EcoO109I	RGGNCCY	1 cut(s)	415
EcoRV	GATATC	1 cut(s)	366
EcoT14I	CCWWGG	1 cut(s)	398
ErhI	CCWWGG	1 cut(s)	398
Esp3I	CGTCTC	1 cut(s)	11
FalI	AAGNNNNNCTT	8 cut(s)	34, 66, 38, 70, 315, 347, 545, 577
FauNDI	CATATG	2 cut(s)	190, 520
FbaI	TGATCA	1 cut(s)	405
FblI	GTMKAC	1 cut(s)	533
Fnu4HI	GCNGC	1 cut(s)	861
FokI	GGATG	1 cut(s)	599
Fsp4HI	GCNGC	1 cut(s)	861
FspBI	CTAG	4 cut(s)	320, 537, 857, 872
GlaI	GCGC	1 cut(s)	330
GluI	GCNGC	1 cut(s)	861
GsaI	CCCAGC	1 cut(s)	118
GsuI	CTGGAG	1 cut(s)	944
HaeII	RGCGCY	1 cut(s)	332
HaeIII	GGCC	1 cut(s)	574
HhaI	GCGC	1 cut(s)	331
Hin6I	GCGC	1 cut(s)	329
HinP1I	GCGC	1 cut(s)	329
HincII	GTYRAC	1 cut(s)	534
HindII	GTYRAC	1 cut(s)	534
HindIII	AAGCTT	1 cut(s)	525
HinfI	GANTC	3 cut(s)	155, 260, 459
HphI	GGTGA	4 cut(s)	415, 454, 557, 729
Hpy166II	GTNNAC	1 cut(s)	534
Hpy188I	TCNGA	5 cut(s)	160, 283, 391, 706, 916
Hpy188III	TCNNGA	3 cut(s)	14, 257, 662
Hpy8I	GTNNAC	1 cut(s)	534
HpyAV	CCTTC	6 cut(s)	60, 64, 157, 292, 744, 768
HpyCH4III	ACNGT	2 cut(s)	273, 452
HpyCH4IV	ACGT	1 cut(s)	888
HpyCH4V	TGCA	2 cut(s)	197, 654
HpyF10VI	GCNNNNNNNGC	2 cut(s)	515, 524
HpyF3I	CTNAG	3 cut(s)	264, 690, 864
HpySE526I	ACGT	1 cut(s)	888
HspAI	GCGC	1 cut(s)	329
KpnI	GGTACC	1 cut(s)	357
Ksp22I	TGATCA	1 cut(s)	405
Kzo9I	GATC	4 cut(s)	10, 58, 391, 405
Lsp1109I	GCAGC	1 cut(s)	847
LweI	GCATC	1 cut(s)	577
MaeI	CTAG	4 cut(s)	320, 537, 857, 872
MaeII	ACGT	1 cut(s)	888
MaeIII	GTNAC	2 cut(s)	627, 634
MalI	GATC	4 cut(s)	12, 60, 393, 407
MboI	GATC	4 cut(s)	10, 58, 391, 405
MflI	RGATCY	1 cut(s)	391
MluCI	AATT	5 cut(s)	79, 107, 139, 222, 830
MlyI	GAGTC	1 cut(s)	254
MnlI	CCTC	9 cut(s)	209, 352, 508, 730, 750, 772, 814, 896, 899
MroXI	GAANNNNTTC	1 cut(s)	778
MseI	TTAA	3 cut(s)	252, 699, 834
MspCI	CTTAAG	1 cut(s)	698
MwoI	GCNNNNNNNGC	2 cut(s)	515, 524
NdeI	CATATG	2 cut(s)	190, 520
NdeII	GATC	4 cut(s)	10, 58, 391, 405
NlaIV	GGNNCC	1 cut(s)	355
NspV	TTCGAA	1 cut(s)	782
PcsI	WCGNNNNNNNCGW	1 cut(s)	885
PdmI	GAANNNNTTC	1 cut(s)	778
PfeI	GAWTC	2 cut(s)	155, 459
PkrI	GCNGC	1 cut(s)	862
PleI	GAGTC	1 cut(s)	254
PpsI	GAGTC	1 cut(s)	254
Ppu21I	YACGTR	1 cut(s)	889
PpuMI	RGGWCCY	1 cut(s)	415
PsiI	TTATAA	2 cut(s)	426, 617
Psp5II	RGGWCCY	1 cut(s)	415
PspFI	CCCAGC	1 cut(s)	114
PspN4I	GGNNCC	1 cut(s)	355
PspPI	GGNCC	1 cut(s)	415
PspPPI	RGGWCCY	1 cut(s)	415
PsuI	RGATCY	1 cut(s)	391
RsaI	GTAC	2 cut(s)	173, 355
RsaNI	GTAC	2 cut(s)	172, 354
SalI	GTCGAC	1 cut(s)	532
SaqAI	TTAA	3 cut(s)	252, 699, 834
SatI	GCNGC	1 cut(s)	861
Sau3AI	GATC	4 cut(s)	10, 58, 391, 405
Sau96I	GGNCC	1 cut(s)	415
SchI	GAGTC	1 cut(s)	254
SfaNI	GCATC	1 cut(s)	577
SfcI	CTRYAG	1 cut(s)	269
SfuI	TTCGAA	1 cut(s)	782
SinI	GGWCC	1 cut(s)	415
SmlI	CTYRAG	1 cut(s)	698
SmoI	CTYRAG	1 cut(s)	698
SnaBI	TACGTA	1 cut(s)	889
Sse9I	AATT	5 cut(s)	79, 107, 139, 222, 830
SspMI	CTAG	4 cut(s)	320, 537, 857, 872
StyI	CCWWGG	1 cut(s)	398
TaaI	ACNGT	2 cut(s)	273, 452
TaiI	ACGT	1 cut(s)	891
TaqI	TCGA	5 cut(s)	57, 374, 533, 578, 782
TaqII	GACCGA	1 cut(s)	830
TasI	AATT	5 cut(s)	79, 107, 139, 222, 830
TfiI	GAWTC	2 cut(s)	155, 459
Tru1I	TTAA	3 cut(s)	252, 699, 834
Tru9I	TTAA	3 cut(s)	252, 699, 834
TscAI	CASTG	2 cut(s)	648, 900
TseI	GCWGC	1 cut(s)	860
TspDTI	ATGAA	6 cut(s)	177, 222, 537, 717, 933, 945
TspRI	CASTG	2 cut(s)	648, 900
Vha464I	CTTAAG	1 cut(s)	698
VpaK11BI	GGWCC	1 cut(s)	415
XapI	RAATTY	1 cut(s)	830
XmiI	GTMKAC	1 cut(s)	533
XmnI	GAANNNNTTC	1 cut(s)	778
XspI	CTAG	4 cut(s)	320, 537, 857, 872

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.