Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0003603

Physical Location & Seq

Genomic Coordinates Reverse (-)

5763940 .. 5768891

Gene Structure 4952 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G079200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 942 bp

ATGGAAGAGTACACTCTCGTGGTGAGGAAGCCCTGTTTTGGCTTGCCTACTGCTTGCCCTTCATGCTTGCCGGTCTTCTTCTACCTCAAGTTTGCTAATGTTCCCTTTCACTTGGCTTACAATCTTACCTACCCTGACTCTGATAAAATCCCTTATATTGAATCTGGTGAGTACGTGACTTATAATAATGAGAAGGGTGGCATTATCGAAAGACTGAAAGAAGATCGCATTGCTGATTTGGACACTGAACTTCACTCAGTTCCAGAATGGATATCTACAAAGGCAATGATTAGCTCCTGGCTTGCTGATGCAATCAAGTATGAACTCTGGTTGGGAACAGATGGTAGTTCTGCTGAAACGATATATTATTCTGATCTCCCATGGCCAATTGGAAAGATTCTATTCTTAAAGCAACTGCACAAAGTAAAGCAGGAACTTGGGATTACCAAAGACAATTCTGAGAAAATAGAAGAACAGACATACAAGAGAGCCAGCCTTGCATTTGGAGCCCTGTCAAGTAGGTTGGAGGAACAGAACTTTTTATTTGAAAACAGGCCATCAAGTTTGGATGCACTCTTTCTTGGGCAGGCACTTATCACTCTTCAAGCATTACCAGAAACATCAGTGCTGCGGAGCAAGCTTTTAGAACATGAAAACCTTGTTAGGTATGTTGATAGGCTTAAGACAGAGTTCGTGGATGCAGGTTCTTCATCTTCAGTCCCAAACTACCCTTCATCAGCAGCTCCTAGAAGAGGTCCTTCAAATTGGAGTTCTAAGCCCAAGAGCAAACCCAAAAGGGAAAAAACAAAAGAGGAGAAAAGTTTTCAGAGAAGGTCCAAATATTTTTTGGTAGCACAGCTGGTTTCAGTTGTACTTTTCGTCACTCTCATGGCCCGAGCAGATGATGCTGAAATTGAGCTTGATGATGAAGGATATGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005741 GO:0005743 GO:0006605 GO:0006626 GO:0006810 GO:0006839 GO:0006886 GO:0006996 GO:0007005 GO:0008104 GO:0008150 GO:0009536 GO:0009987 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0019866 GO:0019867 GO:0031090 GO:0031966 GO:0031967 GO:0031968 GO:0031975 GO:0033036 GO:0033365 GO:0034613 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0070585 GO:0070727 GO:0071702 GO:0071705 GO:0071840 GO:0072594 GO:0072655 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GST_C_6 GST_N_4

Protein Analysis

314

Amino Acids

35.65

Weight (kDa)

5.51

Isoelectric Point (pI)

50.8

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003603)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G19080 AT2G19080
fragaria_vesca	FvH4_4g07590 FvH4_4g07590 FvH4_4g07590 FvH4_4g07590 FvH4_4g07590 FvH4_4g07590 FvH4_4g07590
malus_domestica	MD13G1245600.v1.1
prunus_persica	Prupe.1G079200_v2.0.a1
pyrus_communis	pycom13g21680 pycom16g21400
rosa_chinensis	RchiOBHm_Chr4g0400191 RchiOBHm_Chr7g0191431 RchiOBHm_Chr7g0191541
rosa_laevigata	RLG00000004440 RLG00000009205
rosa_multiflora	Rmu_co8142490.1_g000001 Rmu_sc0000037.1_g000022 Rmu_sc0002661.1_g000008 Rmu_sc0003634.1_g000010 Rmu_sc0010599.1_g000007
rosa_roxburghii	Rroxscaffold_5G00345140
rosa_rugosa	Rorug04G0023500 Rorug04G0023600 Rorug04G0023700
rosa_samantha	Rh4AG098800 Rh4BG097100 Rh4CG108300 Rh4DG093800 Rh7AG119100 Rh7CG124100 Rh7DG122200
rosa_wichuraiana	Rw4G008210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	183
Acc36I	ACCTGC	1 cut(s)	692
AciI	CCGC	1 cut(s)	631
AcoI	YGGCCR	1 cut(s)	383
AcuI	CTGAAG	1 cut(s)	699
AfaI	GTAC	3 cut(s)	11, 173, 873
AfiI	CCNNNNNNNGG	2 cut(s)	38, 752
AflII	CTTAAG	1 cut(s)	680
AgsI	TTSAA	4 cut(s)	161, 548, 605, 762
AjnI	CCWGG	1 cut(s)	296
AjuI	GAANNNNNNNTTGG	2 cut(s)	715, 747
AleI	CACNNNNGTG	1 cut(s)	17
AluBI	AGCT	5 cut(s)	294, 640, 743, 859, 919
AluI	AGCT	5 cut(s)	294, 640, 743, 859, 919
Ama87I	CYCGRG	1 cut(s)	894
AoxI	GGCC	3 cut(s)	383, 554, 891
ApeKI	GCWGC	2 cut(s)	628, 740
AspS9I	GGNCC	3 cut(s)	755, 834, 892
AsuHPI	GGTGA	2 cut(s)	34, 179
AvaI	CYCGRG	1 cut(s)	894
AvaII	GGWCC	2 cut(s)	755, 834
BalI	TGGCCA	1 cut(s)	385
BanII	GRGCYC	1 cut(s)	511
BauI	CACGAG	1 cut(s)	17
BbsI	GAAGAC	1 cut(s)	67
BbvI	GCAGC	2 cut(s)	615, 752
BccI	CCATC	2 cut(s)	335, 565
BciT130I	CCWGG	1 cut(s)	298
BfaI	CTAG	1 cut(s)	747
BfrI	CTTAAG	1 cut(s)	680
BfuAI	ACCTGC	1 cut(s)	692
BisI	GCNGC	2 cut(s)	629, 741
BlsI	GCNGC	2 cut(s)	630, 742
Bme1390I	CCNGG	1 cut(s)	298
Bme18I	GGWCC	2 cut(s)	755, 834
BmeT110I	CYCGRG	1 cut(s)	894
BmgT120I	GGNCC	3 cut(s)	755, 834, 892
BmiI	GGNNCC	1 cut(s)	508
BmrFI	CCNGG	1 cut(s)	298
BmsI	GCATC	4 cut(s)	298, 559, 688, 895
BpiI	GAAGAC	1 cut(s)	67
BpuEI	CTTGAG	1 cut(s)	71
BsaAI	YACGTR	1 cut(s)	175
BsaJI	CCNNGG	1 cut(s)	380
Bsc4I	CCNNNNNNNGG	2 cut(s)	38, 752
Bse118I	RCCGGY	1 cut(s)	70
Bse3DI	GCAATG	2 cut(s)	228, 291
BseBI	CCWGG	1 cut(s)	298
BseDI	CCNNGG	1 cut(s)	380
BseGI	GGATG	2 cut(s)	574, 703
BseLI	CCNNNNNNNGG	2 cut(s)	38, 752
BseMI	GCAATG	2 cut(s)	228, 291
BseMII	CTCAG	2 cut(s)	270, 450
BseRI	GAGGAG	1 cut(s)	827
BseXI	GCAGC	2 cut(s)	615, 752
BsgI	GTGCAG	1 cut(s)	401
BshFI	GGCC	3 cut(s)	385, 556, 893
BsiHKCI	CYCGRG	1 cut(s)	894
BsiSI	CCGG	1 cut(s)	71
BslFI	GGGAC	1 cut(s)	704
BslI	CCNNNNNNNGG	2 cut(s)	38, 752
BsmFI	GGGAC	1 cut(s)	704
BsnI	GGCC	3 cut(s)	385, 556, 893
BsoBI	CYCGRG	1 cut(s)	894
Bsp1286I	GDGCHC	1 cut(s)	511
Bsp143I	GATC	2 cut(s)	223, 373
Bsp19I	CCATGG	1 cut(s)	380
BspACI	CCGC	1 cut(s)	631
BspANI	GGCC	3 cut(s)	385, 556, 893
BspCNI	CTCAG	2 cut(s)	269, 451
BspLI	GGNNCC	1 cut(s)	508
BspMI	ACCTGC	1 cut(s)	692
BspTI	CTTAAG	1 cut(s)	680
BsrDI	GCAATG	2 cut(s)	228, 291
BsrFI	RCCGGY	1 cut(s)	70
BssAI	RCCGGY	1 cut(s)	70
BssECI	CCNNGG	1 cut(s)	380
BssMI	GATC	2 cut(s)	223, 373
BssSI	CACGAG	1 cut(s)	17
BssT1I	CCWWGG	1 cut(s)	380
Bst2BI	CACGAG	1 cut(s)	17
Bst2UI	CCWGG	1 cut(s)	298
Bst6I	CTCTTC	2 cut(s)	606, 745
BstAFI	CTTAAG	1 cut(s)	680
BstAPI	GCANNNNNTGC	1 cut(s)	905
BstBAI	YACGTR	1 cut(s)	175
BstC8I	GCNNGC	7 cut(s)	44, 55, 68, 303, 493, 588, 638
BstDEI	CTNAG	3 cut(s)	256, 459, 774
BstDSI	CCRYGG	1 cut(s)	380
BstENI	CCTNNNNNAGG	1 cut(s)	750
BstF5I	GGATG	2 cut(s)	574, 703
BstKTI	GATC	2 cut(s)	226, 376
BstMBI	GATC	2 cut(s)	223, 373
BstMWI	GCNNNNNNNGC	5 cut(s)	63, 497, 506, 637, 905
BstNI	CCWGG	1 cut(s)	298
BstSCI	CCNGG	1 cut(s)	296
BstV1I	GCAGC	2 cut(s)	615, 752
BstV2I	GAAGAC	1 cut(s)	67
BsuRI	GGCC	3 cut(s)	385, 556, 893
BtgI	CCRYGG	1 cut(s)	380
BtsCI	GGATG	2 cut(s)	574, 703
BtsIMutI	CAGTG	2 cut(s)	243, 630
BveI	ACCTGC	1 cut(s)	692
Cac8I	GCNNGC	7 cut(s)	44, 55, 68, 303, 493, 588, 638
Cfr10I	RCCGGY	1 cut(s)	70
Cfr13I	GGNCC	3 cut(s)	755, 834, 892
Csp6I	GTAC	3 cut(s)	10, 172, 872
CviAII	CATG	4 cut(s)	63, 381, 650, 889
CviQI	GTAC	3 cut(s)	10, 172, 872
DdeI	CTNAG	3 cut(s)	256, 459, 774
DpnI	GATC	2 cut(s)	225, 375
DpnII	GATC	2 cut(s)	223, 373
EaeI	YGGCCR	1 cut(s)	383
Eam1104I	CTCTTC	2 cut(s)	606, 745
EarI	CTCTTC	2 cut(s)	606, 745
Eco130I	CCWWGG	1 cut(s)	380
Eco24I	GRGCYC	1 cut(s)	511
Eco32I	GATATC	1 cut(s)	273
Eco47I	GGWCC	2 cut(s)	755, 834
Eco57I	CTGAAG	1 cut(s)	699
Eco88I	CYCGRG	1 cut(s)	894
EcoNI	CCTNNNNNAGG	1 cut(s)	750
EcoO109I	RGGNCCY	1 cut(s)	755
EcoRII	CCWGG	1 cut(s)	296
EcoRV	GATATC	1 cut(s)	273
EcoT14I	CCWWGG	1 cut(s)	380
EcoT38I	GRGCYC	1 cut(s)	511
ErhI	CCWWGG	1 cut(s)	380
FaeI	CATG	4 cut(s)	66, 384, 653, 892
FalI	AAGNNNNNCTT	2 cut(s)	742, 774
FaqI	GGGAC	1 cut(s)	704
FatI	CATG	4 cut(s)	62, 380, 649, 888
Fnu4HI	GCNGC	2 cut(s)	629, 741
FokI	GGATG	2 cut(s)	581, 710
FriOI	GRGCYC	1 cut(s)	511
Fsp4HI	GCNGC	2 cut(s)	629, 741
FspBI	CTAG	1 cut(s)	747
GluI	GCNGC	2 cut(s)	629, 741
HaeIII	GGCC	3 cut(s)	385, 556, 893
HapII	CCGG	1 cut(s)	71
Hin1II	CATG	4 cut(s)	66, 384, 653, 892
HindIII	AAGCTT	1 cut(s)	638
HinfI	GANTC	3 cut(s)	137, 161, 397
HpaII	CCGG	1 cut(s)	71
HphI	GGTGA	2 cut(s)	34, 179
Hpy166II	GTNNAC	1 cut(s)	12
Hpy188I	TCNGA	4 cut(s)	142, 373, 460, 828
Hpy188III	TCNNGA	1 cut(s)	263
Hpy8I	GTNNAC	1 cut(s)	12
HpyAV	CCTTC	6 cut(s)	69, 187, 741, 768, 825, 923
HpyCH4IV	ACGT	1 cut(s)	174
HpyCH4V	TGCA	5 cut(s)	311, 418, 500, 572, 701
HpyF10VI	GCNNNNNNNGC	5 cut(s)	63, 497, 506, 637, 905
HpyF3I	CTNAG	3 cut(s)	256, 459, 774
HpySE526I	ACGT	1 cut(s)	174
Hsp92II	CATG	4 cut(s)	66, 384, 653, 892
Kzo9I	GATC	2 cut(s)	223, 373
LmnI	GCTCC	4 cut(s)	299, 506, 633, 748
Lsp1109I	GCAGC	2 cut(s)	615, 752
LweI	GCATC	4 cut(s)	298, 559, 688, 895
MaeI	CTAG	1 cut(s)	747
MaeII	ACGT	1 cut(s)	174
MaeIII	GTNAC	2 cut(s)	175, 880
MalI	GATC	2 cut(s)	225, 375
MboI	GATC	2 cut(s)	223, 373
MboII	GAAGA	9 cut(s)	17, 67, 70, 233, 482, 593, 699, 705, 762
MfeI	CAATTG	1 cut(s)	387
MhlI	GDGCHC	1 cut(s)	511
MlsI	TGGCCA	1 cut(s)	385
MluCI	AATT	4 cut(s)	387, 454, 763, 912
MluNI	TGGCCA	1 cut(s)	385
MlyI	GAGTC	1 cut(s)	131
MmeI	TCCRAC	1 cut(s)	504
MnlI	CCTC	5 cut(s)	18, 95, 520, 746, 805
Mox20I	TGGCCA	1 cut(s)	385
MscI	TGGCCA	1 cut(s)	385
MseI	TTAA	2 cut(s)	407, 681
MslI	CAYNNNNRTG	2 cut(s)	17, 887
Msp20I	TGGCCA	1 cut(s)	385
MspA1I	CMGCKG	1 cut(s)	859
MspCI	CTTAAG	1 cut(s)	680
MspI	CCGG	1 cut(s)	71
MspR9I	CCNGG	1 cut(s)	298
MunI	CAATTG	1 cut(s)	387
MvaI	CCWGG	1 cut(s)	298
MwoI	GCNNNNNNNGC	5 cut(s)	63, 497, 506, 637, 905
NcoI	CCATGG	1 cut(s)	380
NdeII	GATC	2 cut(s)	223, 373
NlaIII	CATG	4 cut(s)	66, 384, 653, 892
NlaIV	GGNNCC	1 cut(s)	508
NmuCI	GTSAC	2 cut(s)	175, 880
OliI	CACNNNNGTG	1 cut(s)	17
PfeI	GAWTC	2 cut(s)	161, 397
PkrI	GCNGC	2 cut(s)	630, 742
PleI	GAGTC	1 cut(s)	131
PpsI	GAGTC	1 cut(s)	131
Ppu21I	YACGTR	1 cut(s)	175
PpuMI	RGGWCCY	1 cut(s)	755
PsiI	TTATAA	1 cut(s)	183
Psp5II	RGGWCCY	1 cut(s)	755
Psp6I	CCWGG	1 cut(s)	296
PspGI	CCWGG	1 cut(s)	296
PspN4I	GGNNCC	1 cut(s)	508
PspPI	GGNCC	3 cut(s)	755, 834, 892
PspPPI	RGGWCCY	1 cut(s)	755
PvuII	CAGCTG	1 cut(s)	859
RsaI	GTAC	3 cut(s)	11, 173, 873
RsaNI	GTAC	3 cut(s)	10, 172, 872
RseI	CAYNNNNRTG	2 cut(s)	17, 887
SaqAI	TTAA	2 cut(s)	407, 681
SatI	GCNGC	2 cut(s)	629, 741
Sau3AI	GATC	2 cut(s)	223, 373
Sau96I	GGNCC	3 cut(s)	755, 834, 892
SchI	GAGTC	1 cut(s)	131
ScrFI	CCNGG	1 cut(s)	298
SduI	GDGCHC	1 cut(s)	511
SfaNI	GCATC	4 cut(s)	298, 559, 688, 895
SinI	GGWCC	2 cut(s)	755, 834
SmiMI	CAYNNNNRTG	2 cut(s)	17, 887
SmlI	CTYRAG	2 cut(s)	86, 680
SmoI	CTYRAG	2 cut(s)	86, 680
Sse9I	AATT	4 cut(s)	387, 454, 763, 912
SsiI	CCGC	1 cut(s)	631
SspI	AATATT	1 cut(s)	842
SspMI	CTAG	1 cut(s)	747
StyD4I	CCNGG	1 cut(s)	296
StyI	CCWWGG	1 cut(s)	380
TaiI	ACGT	1 cut(s)	177
TaqI	TCGA	1 cut(s)	207
TasI	AATT	4 cut(s)	387, 454, 763, 912
TatI	WGTACW	2 cut(s)	9, 871
TfiI	GAWTC	2 cut(s)	161, 397
Tru1I	TTAA	2 cut(s)	407, 681
Tru9I	TTAA	2 cut(s)	407, 681
TscAI	CASTG	2 cut(s)	250, 630
TseFI	GTSAC	2 cut(s)	175, 880
TseI	GCWGC	2 cut(s)	628, 740
Tsp45I	GTSAC	2 cut(s)	175, 880
TspDTI	ATGAA	6 cut(s)	51, 336, 666, 699, 723, 942
TspRI	CASTG	2 cut(s)	250, 630
Vha464I	CTTAAG	1 cut(s)	680
VpaK11BI	GGWCC	2 cut(s)	755, 834
XagI	CCTNNNNNAGG	1 cut(s)	750
XcmI	CCANNNNNNNNNTGG	1 cut(s)	844
XspI	CTAG	1 cut(s)	747

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.