Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002019

Physical Location & Seq

Genomic Coordinates Reverse (-)

10364451 .. 10366902

Gene Structure 2452 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G24360.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1236 bp

ATGCTAGAAGGAGCAAAGTTCAACGTGCTTGCTGTTGGGAATCATCACAACAACGACAACAATTACTATGCTTTTACGCAAGAGTTTTATCAAAAACTTAATGAAGGTTCAAACATGTCCATGGAGAGTATGCAGACGAGTAACGCTGGAGGATCTGTCTCAATGTCTGTGGATAACAGTAGCGTTGGTTCCAGCGATGCTCTTATTGGCCACCCGGGTTTGAAGCCTGTACGCCATTACTCACTCTCGGTTGGTCAAAGCGTGTTTCGCCCGGGAAGAGTTACCCATGCGTTGAATGATGATGCTTTGGCTCAAGCACTGATGGATACCAGGTATCCAACTGAAGGGCTGACGAACTATGATGAGTGGACGATTGATCTGAGGAAACTCAACATGGGTCCTGCCTTTGCTCAAGGGGCTTTTGGTAAATTATACAAAGGGACATACAACGGTGAAGATGTAGCTATCAAAATACTTGAGCGGCCAGAGAACAGCCCAGAAAAGGCACAGTTCATGGAACAACAGTTTCAGCAAGAGGTGTCTATGCTTGCTAATTTGAAGCACCCAAACATTGTGAGGTTCATTGGTGCATGTCGCAAGCCAATGGTGTGGTGTATAGTGACTGAATACGCCAAAGGAGGTTCAGTGAGGCAGTTTTTGACTAGGAGACAGAACCGAGCCGTCCCTTTGAAGTTAGCTGTTAAACAGGCTTTGGATGTTGCTAGGGGTATGGCTTATGTCCATGGACGCAACTTCATACACAGAGATCTCAAGTCAGATAACCTTCTCATCTCAGCAGATAAGTCCATCAAGATTGCAGATTTTGGTGTTGCAAGAATTGAAGTTCAAACCGAAGGAATGACACCAGAAACTGGAACTTACAGATGGATGGCTCCAGAGATGATACAGCATAGAGCCTACAATCAAAAAGTGGATGTGTATAGTTTCGGGATTGTGCTGTGGGAGTTAATCACAGGACTCTTACCGTTCCAGAACATGACAGCTGTACAGGCAGCGTTTGCGGTTGTAAACAGAGGAGTGCGTCCAACAGTCCCAAACGATTGTCTCCCGGTGCTGAGTGACATTATGACTCGATGTTGGGATGCTAATCCAGAAGTCCGTCCATGTTTTGTGGAGGTTGTGAAGCTGCTTGAAGCTGCAGAAACAGAGATAATGACGACAGCGAGAAAAGCCCGTTTCAGATGTTGCTTGAGCCAGCCGATGACGATTGACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004712 GO:0004713 GO:0005575 GO:0005622 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0009791 GO:0009987 GO:0010154 GO:0010344 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018108 GO:0018193 GO:0018212 GO:0019538 GO:0022414 GO:0023052 GO:0032501 GO:0032502 GO:0035556 GO:0036211 GO:0043170 GO:0043412 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0061458 GO:0065007 GO:0071704 GO:0071840 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase_Tyr

Protein Analysis

411

Amino Acids

46.0

Weight (kDa)

8.09

Isoelectric Point (pI)

33.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PK_Tyr_Ser-Thr	PF07714	135 - 383	7.5e-68	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	138 - 381	8.9e-56	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002019)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G24360 AT4G31170 AT4G31170 AT4G31170 AT4G31170 AT4G31170 AT4G31170 AT4G31170 AT4G31170 AT4G31170 AT4G31170
fragaria_vesca	FvH4_4g00150 FvH4_4g00150 FvH4_4g00150 FvH4_4g00150
malus_domestica	MD00G1091600.v1.1 MD04G1001200.v1.1 MD04G1001300.v1.1 MD13G1286000.v1.1
prunus_persica	Prupe.1G001200_v2.0.a1 Prupe.1G001300_v2.0.a1
pyrus_communis	pycom04g00180 pycom04g00190 pycom420g00210
rosa_chinensis	RchiOBHm_Chr3g0494021 RchiOBHm_Chr4g0384771
rosa_laevigata	RLG00000010273 RLG00000022687
rosa_multiflora	Rmu_sc0001322.1_g000022 Rmu_sc0003412.1_g000004
rosa_roxburghii	Rroxscaffold_5G00332830 Rroxscaffold_6G00391360
rosa_rugosa	Rorug03G0263700 Rorug03G0297500 Rorug03G0297500
rosa_samantha	Rh3AG313300 Rh3BG349400 Rh3CG346200 Rh3DG348700 Rh4AG001100 Rh4BG001000 Rh4CG000900 Rh4DG001000
rosa_wichuraiana	Rw3G027420 Rw4G000780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	872
AccBSI	CCGCTC	1 cut(s)	481
AciI	CCGC	2 cut(s)	481, 1022
AclWI	GGATC	1 cut(s)	160
AcoI	YGGCCR	2 cut(s)	208, 482
AcuI	CTGAAG	1 cut(s)	363
AfaI	GTAC	2 cut(s)	231, 1008
AfiI	CCNNNNNNNGG	3 cut(s)	344, 502, 872
AflIII	ACRYGT	1 cut(s)	114
AgsI	TTSAA	9 cut(s)	22, 111, 223, 295, 559, 691, 842, 848, 1154
AjnI	CCWGG	1 cut(s)	329
AluBI	AGCT	5 cut(s)	464, 698, 1004, 1147, 1157
AluI	AGCT	5 cut(s)	464, 698, 1004, 1147, 1157
Alw26I	GTCTC	3 cut(s)	163, 661, 1070
AlwI	GGATC	1 cut(s)	160
AlwNI	CAGNNNCTG	1 cut(s)	872
Ama87I	CYCGRG	2 cut(s)	214, 271
AoxI	GGCC	2 cut(s)	208, 482
ApeKI	GCWGC	3 cut(s)	1013, 1147, 1157
AspS9I	GGNCC	1 cut(s)	398
AsuC2I	CCSGG	5 cut(s)	215, 216, 272, 273, 1070
AsuHPI	GGTGA	1 cut(s)	464
AvaI	CYCGRG	2 cut(s)	214, 271
AvaII	GGWCC	1 cut(s)	398
BalI	TGGCCA	1 cut(s)	210
BbvI	GCAGC	3 cut(s)	1025, 1134, 1144
BccI	CCATC	4 cut(s)	316, 815, 879, 883
BceAI	ACGGC	1 cut(s)	665
BciT130I	CCWGG	1 cut(s)	331
BciVI	GTATCC	2 cut(s)	319, 345
BcnI	CCSGG	5 cut(s)	215, 216, 272, 273, 1070
BcoDI	GTCTC	3 cut(s)	163, 661, 1070
BfaI	CTAG	3 cut(s)	5, 663, 723
BfmI	CTRYAG	1 cut(s)	1158
BfuI	GTATCC	2 cut(s)	319, 345
BglII	AGATCT	1 cut(s)	766
BisI	GCNGC	4 cut(s)	482, 1014, 1148, 1158
BlsI	GCNGC	4 cut(s)	483, 1015, 1149, 1159
Bme1390I	CCNGG	6 cut(s)	215, 216, 272, 273, 331, 1070
Bme18I	GGWCC	1 cut(s)	398
BmeT110I	CYCGRG	2 cut(s)	214, 271
BmgT120I	GGNCC	1 cut(s)	398
BmiI	GGNNCC	3 cut(s)	190, 399, 894
BmrFI	CCNGG	6 cut(s)	215, 216, 272, 273, 331, 1070
BmsI	GCATC	3 cut(s)	187, 292, 1093
BpmI	CTGGAG	2 cut(s)	168, 879
BpuEI	CTTGAG	5 cut(s)	297, 396, 497, 755, 1231
BpuMI	CCSGG	5 cut(s)	215, 216, 272, 273, 1070
BsaBI	GATNNNNATC	1 cut(s)	1107
BsaJI	CCNNGG	4 cut(s)	120, 214, 271, 742
BsaXI	ACNNNNNCTCC	4 cut(s)	141, 171, 630, 660
Bsc4I	CCNNNNNNNGG	3 cut(s)	344, 502, 872
Bse1I	ACTGG	1 cut(s)	877
Bse8I	GATNNNNATC	1 cut(s)	1107
BseBI	CCWGG	1 cut(s)	331
BseDI	CCNNGG	4 cut(s)	120, 214, 271, 742
BseGI	GGATG	4 cut(s)	721, 894, 940, 1108
BseJI	GATNNNNATC	1 cut(s)	1107
BseLI	CCNNNNNNNGG	3 cut(s)	344, 502, 872
BseMII	CTCAG	3 cut(s)	371, 807, 1067
BseNI	ACTGG	1 cut(s)	877
BseRI	GAGGAG	1 cut(s)	1050
BseXI	GCAGC	3 cut(s)	1025, 1134, 1144
BshFI	GGCC	2 cut(s)	210, 484
BsiHKCI	CYCGRG	2 cut(s)	214, 271
BsiSI	CCGG	3 cut(s)	215, 272, 1070
BslFI	GGGAC	3 cut(s)	454, 668, 1037
BslI	CCNNNNNNNGG	3 cut(s)	344, 502, 872
BsmAI	GTCTC	3 cut(s)	163, 661, 1070
BsmFI	GGGAC	3 cut(s)	454, 668, 1037
BsnI	GGCC	2 cut(s)	210, 484
BsoBI	CYCGRG	2 cut(s)	214, 271
Bsp1407I	TGTACA	1 cut(s)	1006
Bsp143I	GATC	3 cut(s)	152, 376, 766
Bsp19I	CCATGG	2 cut(s)	120, 742
BspACI	CCGC	2 cut(s)	481, 1022
BspANI	GGCC	2 cut(s)	210, 484
BspCNI	CTCAG	3 cut(s)	372, 806, 1068
BspLI	GGNNCC	3 cut(s)	190, 399, 894
BspMAI	CTGCAG	1 cut(s)	1162
BspPI	GGATC	1 cut(s)	160
BsrBI	CCGCTC	1 cut(s)	481
BsrGI	TGTACA	1 cut(s)	1006
BsrI	ACTGG	1 cut(s)	877
BssECI	CCNNGG	4 cut(s)	120, 214, 271, 742
BssMI	GATC	3 cut(s)	152, 376, 766
BssT1I	CCWWGG	2 cut(s)	120, 742
Bst2UI	CCWGG	1 cut(s)	331
Bst4CI	ACNGT	6 cut(s)	179, 452, 510, 525, 987, 1051
Bst6I	CTCTTC	1 cut(s)	271
BstAPI	GCANNNNNTGC	1 cut(s)	1019
BstAUI	TGTACA	1 cut(s)	1006
BstC8I	GCNNGC	4 cut(s)	30, 549, 599, 1217
BstDEI	CTNAG	3 cut(s)	380, 793, 1076
BstDSI	CCRYGG	2 cut(s)	120, 742
BstF5I	GGATG	4 cut(s)	721, 894, 940, 1108
BstKTI	GATC	3 cut(s)	155, 379, 769
BstMAI	GTCTC	3 cut(s)	163, 661, 1070
BstMBI	GATC	3 cut(s)	152, 376, 766
BstMWI	GCNNNNNNNGC	5 cut(s)	267, 416, 1010, 1019, 1190
BstNI	CCWGG	1 cut(s)	331
BstNSI	RCATGY	2 cut(s)	118, 594
BstSCI	CCNGG	6 cut(s)	213, 214, 270, 271, 329, 1068
BstSFI	CTRYAG	1 cut(s)	1158
BstV1I	GCAGC	3 cut(s)	1025, 1134, 1144
BstX2I	RGATCY	2 cut(s)	152, 766
BstXI	CCANNNNNNTGG	1 cut(s)	609
BstYI	RGATCY	2 cut(s)	152, 766
BsuI	GTATCC	2 cut(s)	319, 345
BsuRI	GGCC	2 cut(s)	210, 484
BtgI	CCRYGG	2 cut(s)	120, 742
BtgZI	GCGATG	1 cut(s)	210
BtsCI	GGATG	4 cut(s)	721, 894, 940, 1108
BtsIMutI	CAGTG	2 cut(s)	317, 651
Cac8I	GCNNGC	4 cut(s)	30, 549, 599, 1217
CaiI	CAGNNNCTG	1 cut(s)	872
Cfr13I	GGNCC	1 cut(s)	398
Cfr9I	CCCGGG	2 cut(s)	214, 271
CseI	GACGC	2 cut(s)	756, 1031
CsiI	ACCWGGT	1 cut(s)	329
Csp6I	GTAC	2 cut(s)	230, 1007
CspCI	CAANNNNNGTGG	2 cut(s)	150, 185
CviAII	CATG	9 cut(s)	115, 121, 287, 394, 514, 591, 743, 997, 1125
CviQI	GTAC	2 cut(s)	230, 1007
DdeI	CTNAG	3 cut(s)	380, 793, 1076
DpnI	GATC	3 cut(s)	154, 378, 768
DpnII	GATC	3 cut(s)	152, 376, 766
EaeI	YGGCCR	2 cut(s)	208, 482
Eam1104I	CTCTTC	1 cut(s)	271
EarI	CTCTTC	1 cut(s)	271
Eco130I	CCWWGG	2 cut(s)	120, 742
Eco47I	GGWCC	1 cut(s)	398
Eco57I	CTGAAG	1 cut(s)	363
Eco88I	CYCGRG	2 cut(s)	214, 271
EcoO109I	RGGNCCY	1 cut(s)	398
EcoRII	CCWGG	1 cut(s)	329
EcoT14I	CCWWGG	2 cut(s)	120, 742
ErhI	CCWWGG	2 cut(s)	120, 742
FaeI	CATG	9 cut(s)	118, 124, 290, 397, 517, 594, 746, 1000, 1128
FaqI	GGGAC	3 cut(s)	454, 668, 1037
FatI	CATG	9 cut(s)	114, 120, 286, 393, 513, 590, 742, 996, 1124
Fnu4HI	GCNGC	4 cut(s)	482, 1014, 1148, 1158
FokI	GGATG	4 cut(s)	728, 901, 947, 1115
Fsp4HI	GCNGC	4 cut(s)	482, 1014, 1148, 1158
FspBI	CTAG	3 cut(s)	5, 663, 723
GluI	GCNGC	4 cut(s)	482, 1014, 1148, 1158
GsuI	CTGGAG	2 cut(s)	168, 879
HaeIII	GGCC	2 cut(s)	210, 484
HapII	CCGG	3 cut(s)	215, 272, 1070
HgaI	GACGC	2 cut(s)	756, 1031
Hin1II	CATG	9 cut(s)	118, 124, 290, 397, 517, 594, 746, 1000, 1128
HinfI	GANTC	3 cut(s)	40, 978, 1090
HpaII	CCGG	3 cut(s)	215, 272, 1070
HphI	GGTGA	1 cut(s)	464
Hpy166II	GTNNAC	2 cut(s)	369, 1030
Hpy188I	TCNGA	3 cut(s)	381, 778, 1202
Hpy188III	TCNNGA	5 cut(s)	811, 896, 949, 991, 1112
Hpy8I	GTNNAC	2 cut(s)	369, 1030
HpyAV	CCTTC	4 cut(s)	98, 338, 794, 848
HpyCH4III	ACNGT	6 cut(s)	179, 452, 510, 525, 987, 1051
HpyCH4IV	ACGT	1 cut(s)	24
HpyCH4V	TGCA	5 cut(s)	133, 590, 818, 833, 1160
HpyF10VI	GCNNNNNNNGC	5 cut(s)	267, 416, 1010, 1019, 1190
HpyF3I	CTNAG	3 cut(s)	380, 793, 1076
HpySE526I	ACGT	1 cut(s)	24
Hsp92II	CATG	9 cut(s)	118, 124, 290, 397, 517, 594, 746, 1000, 1128
Kzo9I	GATC	3 cut(s)	152, 376, 766
LmnI	GCTCC	2 cut(s)	11, 898
Lsp1109I	GCAGC	3 cut(s)	1025, 1134, 1144
LweI	GCATC	3 cut(s)	187, 292, 1093
MabI	ACCWGGT	1 cut(s)	329
MaeI	CTAG	3 cut(s)	5, 663, 723
MaeII	ACGT	1 cut(s)	24
MaeIII	GTNAC	4 cut(s)	140, 280, 619, 1079
MalI	GATC	3 cut(s)	154, 378, 768
MbiI	CCGCTC	1 cut(s)	481
MboI	GATC	3 cut(s)	152, 376, 766
MboII	GAAGA	2 cut(s)	288, 467
MflI	RGATCY	2 cut(s)	152, 766
MlsI	TGGCCA	1 cut(s)	210
MluCI	AATT	4 cut(s)	61, 428, 553, 837
MluNI	TGGCCA	1 cut(s)	210
MlyI	GAGTC	2 cut(s)	972, 1084
MmeI	TCCRAC	2 cut(s)	362, 1070
MnlI	CCTC	8 cut(s)	143, 375, 529, 570, 632, 642, 1028, 1129
Mox20I	TGGCCA	1 cut(s)	210
MscI	TGGCCA	1 cut(s)	210
MseI	TTAA	3 cut(s)	99, 702, 968
MslI	CAYNNNNRTG	1 cut(s)	119
Msp20I	TGGCCA	1 cut(s)	210
MspA1I	CMGCKG	1 cut(s)	1004
MspI	CCGG	3 cut(s)	215, 272, 1070
MspR9I	CCNGG	6 cut(s)	215, 216, 272, 273, 331, 1070
MvaI	CCWGG	1 cut(s)	331
MwoI	GCNNNNNNNGC	5 cut(s)	267, 416, 1010, 1019, 1190
NciI	CCSGG	5 cut(s)	215, 216, 272, 273, 1070
NcoI	CCATGG	2 cut(s)	120, 742
NdeII	GATC	3 cut(s)	152, 376, 766
NlaIII	CATG	9 cut(s)	118, 124, 290, 397, 517, 594, 746, 1000, 1128
NlaIV	GGNNCC	3 cut(s)	190, 399, 894
NmuCI	GTSAC	2 cut(s)	619, 1079
NspI	RCATGY	2 cut(s)	118, 594
PciI	ACATGT	1 cut(s)	114
PfeI	GAWTC	1 cut(s)	40
PflMI	CCANNNNNTGG	1 cut(s)	872
PkrI	GCNGC	4 cut(s)	483, 1015, 1149, 1159
PleI	GAGTC	2 cut(s)	972, 1084
PpsI	GAGTC	2 cut(s)	972, 1084
PpuMI	RGGWCCY	1 cut(s)	398
PscI	ACATGT	1 cut(s)	114
Psp5II	RGGWCCY	1 cut(s)	398
Psp6I	CCWGG	1 cut(s)	329
PspGI	CCWGG	1 cut(s)	329
PspN4I	GGNNCC	3 cut(s)	190, 399, 894
PspPI	GGNCC	1 cut(s)	398
PspPPI	RGGWCCY	1 cut(s)	398
PsrI	GAACNNNNNNTAC	2 cut(s)	172, 204
PstI	CTGCAG	1 cut(s)	1162
PstNI	CAGNNNCTG	1 cut(s)	872
PsuI	RGATCY	2 cut(s)	152, 766
PvuII	CAGCTG	1 cut(s)	1004
RsaI	GTAC	2 cut(s)	231, 1008
RsaNI	GTAC	2 cut(s)	230, 1007
RseI	CAYNNNNRTG	1 cut(s)	119
SaqAI	TTAA	3 cut(s)	99, 702, 968
SatI	GCNGC	4 cut(s)	482, 1014, 1148, 1158
Sau3AI	GATC	3 cut(s)	152, 376, 766
Sau96I	GGNCC	1 cut(s)	398
SchI	GAGTC	2 cut(s)	972, 1084
ScrFI	CCNGG	6 cut(s)	215, 216, 272, 273, 331, 1070
SexAI	ACCWGGT	1 cut(s)	329
SfaNI	GCATC	3 cut(s)	187, 292, 1093
SfcI	CTRYAG	1 cut(s)	1158
SinI	GGWCC	1 cut(s)	398
SmaI	CCCGGG	2 cut(s)	216, 273
SmiMI	CAYNNNNRTG	1 cut(s)	119
SmlI	CTYRAG	5 cut(s)	312, 411, 476, 770, 1210
SmoI	CTYRAG	5 cut(s)	312, 411, 476, 770, 1210
Sse9I	AATT	4 cut(s)	61, 428, 553, 837
SsiI	CCGC	2 cut(s)	481, 1022
SspMI	CTAG	3 cut(s)	5, 663, 723
StyD4I	CCNGG	6 cut(s)	213, 214, 270, 271, 329, 1068
StyI	CCWWGG	2 cut(s)	120, 742
TaaI	ACNGT	6 cut(s)	179, 452, 510, 525, 987, 1051
TaiI	ACGT	1 cut(s)	27
TaqI	TCGA	1 cut(s)	1093
TasI	AATT	4 cut(s)	61, 428, 553, 837
TatI	WGTACW	1 cut(s)	1006
TauI	GCSGC	1 cut(s)	484
TfiI	GAWTC	1 cut(s)	40
Tru1I	TTAA	3 cut(s)	99, 702, 968
Tru9I	TTAA	3 cut(s)	99, 702, 968
TscAI	CASTG	2 cut(s)	324, 651
TseFI	GTSAC	2 cut(s)	619, 1079
TseI	GCWGC	3 cut(s)	1013, 1147, 1157
Tsp45I	GTSAC	2 cut(s)	619, 1079
TspDTI	ATGAA	4 cut(s)	117, 502, 571, 745
TspGWI	ACGGA	1 cut(s)	1109
TspMI	CCCGGG	2 cut(s)	214, 271
TspRI	CASTG	2 cut(s)	324, 651
Van91I	CCANNNNNTGG	1 cut(s)	872
VpaK11BI	GGWCC	1 cut(s)	398
XceI	RCATGY	2 cut(s)	118, 594
XmaI	CCCGGG	2 cut(s)	214, 271
XspI	CTAG	3 cut(s)	5, 663, 723

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.