Rh4DG001000

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
Physical Location & Seq
Reverse (-)
233074 .. 237642
4569 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4DG001000.1

Sequence Viewer

Length: 1251 bp
ATGTTGGAAGGTGGTGCCAAGTTCACTGGAATCATAGGTCTAAACAACAACGATAACAACTACTATGATTTGTCTCAAGTCTTTTACCACAAACTCCATGAGGGTGAGGGTACTAACATGTCCATTGACAGTATGCAAACTAGCGTTGATGGAGGCTCTGTCGCCATGTCTATAGATAACAGCAGCGTTGCTTCTAATACTAATGATTCCCACACACGCATCTTGAACCACCAAGGCCTGCGCCGACGCACAAATGACAACTACTCTGTTGCCCAAAGTGTTAATCGCGGAAGAGTCACCCACGCTCTCAGTGATGATCAGCTTGCCTGTGCTCTAATGGACAGCAATTCCGTCACAGAGGGGCTTGAGAATTATGAGGCGTGGACAATTGACTTAAGAAAGCTAAACATGGGTGACGCTTTTGCACAAGGTGCTTTTGGGAAGCTATACAGAGGTACTTACAACGGAGAGGATGTTGCTATCAAAATTTTGGAGAGGCCTGAGAATGACCCAGAAAAGGCTCAGATAATGGAGCAACAGTTTCAACAGGAAGTCAAGATGTTGGCTACGTTGAAGCATCCAAACATAGTTCGTTTTATTGGTGGCTGCCGTAAACCAATGGTTTGGTGCATTGTAACAGAGTATGCTAAGGGTGGTTCAGTACGGCAATTCTTGATGAGGCGGCAGAGCCGATCAGTACCGTTGAAGTTAGCAGTCAAGCAAGCTCTGGATGTTGCAAGGGGGATGGCATATGTTCATGGTCTCGGCCTGATTCACAGGGACTTGAAATCTGACAACCTTTTGATTTTTTCAGACAAATCAATTAAAATAGCTGATTTTGGGGTTGCCCGTATTGAGGTGCAGACGGAAGGAATGACACCGGAGACAGGGACATACCGCTGGATGGCTCCGGAGATGATCCAGCATCGGCCGTACACTCAGAAAGTTGATGTTTACAGCTTTGGGATTGTTCTTTGGGAACTTATTACAGGGATGCTTCCGTTCTCGAAAATGACAGCAGTGCAGGCAGCGTTTGCAGTTGTCAATAAGGGTGTCCGTCCTATCATTCCCGCTGACTGCTTAACTGTTCTTGGTGAGATAATGACGAGATGCTGGGATCCCAACCCTGATGCCAGGCCACCCTTCACCGAGGTGGTAAGAATGCTCGAGATTGCAGAGACAGAGATCATGACAACCGTTCGGAAGGCTCGTTTCAGGTGTTGCATGACCCAACCAATGACAGCCGACTGA

Protein Analysis

416

Amino Acids

46.62

Weight (kDa)

6.77

Isoelectric Point (pI)

37.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 136 - 389 8.1e-65 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 143 - 387 9.5e-53 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 14
AccII CGCG 1 cut(s) 288
AccIII TCCGGA 1 cut(s) 910
AciI CCGC 4 cut(s) 288, 682, 898, 1071
AclWI GGATC 3 cut(s) 913, 1112, 1125
AcoI YGGCCR 1 cut(s) 929
AcsI RAATTY 1 cut(s) 486
AdeI CACNNNGTG 1 cut(s) 431
AfaI GTAC 5 cut(s) 112, 457, 663, 699, 935
AfiI CCNNNNNNNGG 4 cut(s) 517, 856, 887, 904
AflII CTTAAG 1 cut(s) 394
AflIII ACRYGT 1 cut(s) 117
AgsI TTSAA 5 cut(s) 226, 545, 574, 706, 787
AjnI CCWGG 1 cut(s) 1133
AleI CACNNNNGTG 1 cut(s) 1151
AluBI AGCT 6 cut(s) 322, 403, 445, 725, 833, 960
AluI AGCT 6 cut(s) 322, 403, 445, 725, 833, 960
Alw21I GWGCWC 1 cut(s) 334
Alw26I GTCTC 4 cut(s) 78, 767, 878, 1172
AlwI GGATC 3 cut(s) 913, 1112, 1125
Ama87I CYCGRG 1 cut(s) 1166
Aor13HI TCCGGA 1 cut(s) 910
AoxI GGCC 5 cut(s) 235, 497, 766, 929, 1136
ApeKI GCWGC 3 cut(s) 183, 606, 1028
ApoI RAATTY 1 cut(s) 486
AspLEI GCGC 1 cut(s) 243
AsuHPI GGTGA 5 cut(s) 116, 289, 425, 1106, 1138
AvaI CYCGRG 1 cut(s) 1166
BamHI GGATCC 1 cut(s) 1117
BanI GGYRCC 1 cut(s) 14
Bbv12I GWGCWC 1 cut(s) 334
BbvI GCAGC 3 cut(s) 195, 593, 1040
BccI CCATC 3 cut(s) 143, 739, 898
BceAI ACGGC 3 cut(s) 594, 680, 916
BciT130I CCWGG 1 cut(s) 1135
BclI TGATCA 1 cut(s) 316
BcoDI GTCTC 4 cut(s) 78, 767, 878, 1172
BfaI CTAG 1 cut(s) 141
BfmI CTRYAG 1 cut(s) 171
BfrI CTTAAG 1 cut(s) 394
BisI GCNGC 4 cut(s) 184, 607, 683, 1029
BlsI GCNGC 4 cut(s) 185, 608, 684, 1030
Bme1390I CCNGG 1 cut(s) 1135
BmeT110I CYCGRG 1 cut(s) 1166
BmiI GGNNCC 3 cut(s) 16, 909, 1119
BmrFI CCNGG 1 cut(s) 1135
BmsI GCATC 6 cut(s) 228, 586, 934, 984, 1100, 1120
Bpu10I CCTNAGC 1 cut(s) 648
BpuEI CTTGAG 2 cut(s) 60, 386
BsaI GGTCTC 1 cut(s) 767
BsaJI CCNNGG 2 cut(s) 232, 1149
BsaWI WCCGGW 2 cut(s) 880, 910
BsaXI ACNNNNNCTCC 6 cut(s) 144, 174, 459, 489, 524, 554
Bsc4I CCNNNNNNNGG 4 cut(s) 517, 856, 887, 904
Bse1I ACTGG 1 cut(s) 31
BseAI TCCGGA 1 cut(s) 910
BseBI CCWGG 1 cut(s) 1135
BseDI CCNNGG 2 cut(s) 232, 1149
BseGI GGATG 6 cut(s) 478, 577, 736, 750, 909, 999
BseLI CCNNNNNNNGG 4 cut(s) 517, 856, 887, 904
BseMII CTCAG 4 cut(s) 322, 492, 536, 953
BseNI ACTGG 1 cut(s) 31
BseX3I CGGCCG 1 cut(s) 929
BseXI GCAGC 3 cut(s) 195, 593, 1040
BseYI CCCAGC 1 cut(s) 1113
BsgI GTGCAG 2 cut(s) 881, 1043
Bsh1236I CGCG 1 cut(s) 288
Bsh1285I CGRYCG 1 cut(s) 932
BshFI GGCC 5 cut(s) 237, 499, 768, 931, 1138
BshNI GGYRCC 1 cut(s) 14
BsiEI CGRYCG 1 cut(s) 932
BsiHKAI GWGCWC 1 cut(s) 334
BsiHKCI CYCGRG 1 cut(s) 1166
BsiSI CCGG 2 cut(s) 881, 911
BslFI GGGAC 2 cut(s) 794, 904
BslI CCNNNNNNNGG 4 cut(s) 517, 856, 887, 904
BsmAI GTCTC 4 cut(s) 78, 767, 878, 1172
BsmFI GGGAC 2 cut(s) 794, 904
BsmI GAATGC 1 cut(s) 1167
BsnI GGCC 5 cut(s) 237, 499, 768, 931, 1138
Bso31I GGTCTC 1 cut(s) 767
BsoBI CYCGRG 1 cut(s) 1166
Bsp1286I GDGCHC 1 cut(s) 334
Bsp13I TCCGGA 1 cut(s) 910
Bsp143I GATC 5 cut(s) 316, 692, 918, 1117, 1185
BspACI CCGC 4 cut(s) 288, 682, 898, 1071
BspANI GGCC 5 cut(s) 237, 499, 768, 931, 1138
BspCNI CTCAG 4 cut(s) 321, 493, 535, 952
BspEI TCCGGA 1 cut(s) 910
BspFNI CGCG 1 cut(s) 288
BspHI TCATGA 1 cut(s) 1188
BspLI GGNNCC 3 cut(s) 16, 909, 1119
BspPI GGATC 3 cut(s) 913, 1112, 1125
BspT107I GGYRCC 1 cut(s) 14
BspTI CTTAAG 1 cut(s) 394
BspTNI GGTCTC 1 cut(s) 767
BsrI ACTGG 1 cut(s) 31
BssECI CCNNGG 2 cut(s) 232, 1149
BssMI GATC 5 cut(s) 316, 692, 918, 1117, 1185
BssT1I CCWWGG 1 cut(s) 232
Bst2UI CCWGG 1 cut(s) 1135
Bst4CI ACNGT 5 cut(s) 131, 540, 702, 1087, 1198
Bst6I CTCTTC 1 cut(s) 286
BstAFI CTTAAG 1 cut(s) 394
BstAPI GCANNNNNTGC 2 cut(s) 431, 1034
BstC8I GCNNGC 4 cut(s) 239, 324, 723, 1026
BstDEI CTNAG 5 cut(s) 308, 501, 522, 648, 939
BstF5I GGATG 6 cut(s) 478, 577, 736, 750, 909, 999
BstFNI CGCG 1 cut(s) 288
BstHHI GCGC 1 cut(s) 243
BstKTI GATC 5 cut(s) 319, 695, 921, 1120, 1188
BstMAI GTCTC 4 cut(s) 78, 767, 878, 1172
BstMBI GATC 5 cut(s) 316, 692, 918, 1117, 1185
BstMCI CGRYCG 1 cut(s) 932
BstMWI GCNNNNNNNGC 3 cut(s) 431, 1025, 1034
BstNI CCWGG 1 cut(s) 1135
BstNSI RCATGY 1 cut(s) 121
BstSCI CCNGG 1 cut(s) 1133
BstSFI CTRYAG 1 cut(s) 171
BstUI CGCG 1 cut(s) 288
BstV1I GCAGC 3 cut(s) 195, 593, 1040
BstX2I RGATCY 1 cut(s) 1117
BstXI CCANNNNNNTGG 1 cut(s) 624
BstYI RGATCY 1 cut(s) 1117
BstZI CGGCCG 1 cut(s) 929
BsuRI GGCC 5 cut(s) 237, 499, 768, 931, 1138
BtsCI GGATG 6 cut(s) 478, 577, 736, 750, 909, 999
BtsI GCAGTG 1 cut(s) 1026
BtsIMutI CAGTG 3 cut(s) 24, 316, 1026
Cac8I GCNNGC 4 cut(s) 239, 324, 723, 1026
CciI TCATGA 1 cut(s) 1188
CfoI GCGC 1 cut(s) 243
CseI GACGC 2 cut(s) 255, 425
Csp6I GTAC 5 cut(s) 111, 456, 662, 698, 934
CviAII CATG 7 cut(s) 98, 118, 166, 409, 758, 1189, 1225
CviQI GTAC 5 cut(s) 111, 456, 662, 698, 934
DdeI CTNAG 5 cut(s) 308, 501, 522, 648, 939
DpnI GATC 5 cut(s) 318, 694, 920, 1119, 1187
DpnII GATC 5 cut(s) 316, 692, 918, 1117, 1185
DraIII CACNNNGTG 1 cut(s) 431
EaeI YGGCCR 1 cut(s) 929
EagI CGGCCG 1 cut(s) 929
Eam1104I CTCTTC 1 cut(s) 286
EarI CTCTTC 1 cut(s) 286
EclXI CGGCCG 1 cut(s) 929
Eco130I CCWWGG 1 cut(s) 232
Eco147I AGGCCT 2 cut(s) 237, 499
Eco31I GGTCTC 1 cut(s) 767
Eco52I CGGCCG 1 cut(s) 929
Eco88I CYCGRG 1 cut(s) 1166
EcoRII CCWGG 1 cut(s) 1133
EcoT14I CCWWGG 1 cut(s) 232
ErhI CCWWGG 1 cut(s) 232
FaeI CATG 7 cut(s) 101, 121, 169, 412, 761, 1192, 1228
FaqI GGGAC 2 cut(s) 794, 904
FatI CATG 7 cut(s) 97, 117, 165, 408, 757, 1188, 1224
FauI CCCGC 1 cut(s) 1078
FauNDI CATATG 1 cut(s) 751
FbaI TGATCA 1 cut(s) 316
Fnu4HI GCNGC 4 cut(s) 184, 607, 683, 1029
FokI GGATG 6 cut(s) 485, 564, 743, 757, 916, 1006
Fsp4HI GCNGC 4 cut(s) 184, 607, 683, 1029
FspBI CTAG 1 cut(s) 141
GlaI GCGC 1 cut(s) 242
GluI GCNGC 4 cut(s) 184, 607, 683, 1029
GsaI CCCAGC 1 cut(s) 1117
HaeIII GGCC 5 cut(s) 237, 499, 768, 931, 1138
HapII CCGG 2 cut(s) 881, 911
HgaI GACGC 2 cut(s) 255, 425
HhaI GCGC 1 cut(s) 243
Hin1II CATG 7 cut(s) 101, 121, 169, 412, 761, 1192, 1228
Hin6I GCGC 1 cut(s) 241
HinP1I GCGC 1 cut(s) 241
HinfI GANTC 4 cut(s) 30, 206, 294, 772
HpaII CCGG 2 cut(s) 881, 911
HphI GGTGA 5 cut(s) 116, 289, 425, 1106, 1138
Hpy166II GTNNAC 5 cut(s) 24, 384, 614, 936, 955
Hpy188I TCNGA 5 cut(s) 525, 793, 814, 942, 1203
Hpy188III TCNNGA 8 cut(s) 223, 556, 673, 728, 911, 1006, 1168, 1189
Hpy8I GTNNAC 5 cut(s) 24, 384, 614, 936, 955
Hpy99I CGWCG 1 cut(s) 249
HpyAV CCTTC 3 cut(s) 863, 1153, 1198
HpyCH4III ACNGT 5 cut(s) 131, 540, 702, 1087, 1198
HpyCH4IV ACGT 1 cut(s) 569
HpyCH4V TGCA 9 cut(s) 136, 425, 630, 737, 862, 1024, 1037, 1175, 1224
HpyF10VI GCNNNNNNNGC 3 cut(s) 431, 1025, 1034
HpyF3I CTNAG 5 cut(s) 308, 501, 522, 648, 939
HpySE526I ACGT 1 cut(s) 569
Hsp92II CATG 7 cut(s) 101, 121, 169, 412, 761, 1192, 1228
HspAI GCGC 1 cut(s) 241
Kpn2I TCCGGA 1 cut(s) 910
Ksp22I TGATCA 1 cut(s) 316
Kzo9I GATC 5 cut(s) 316, 692, 918, 1117, 1185
LmnI GCTCC 2 cut(s) 532, 913
Lsp1109I GCAGC 3 cut(s) 195, 593, 1040
LweI GCATC 6 cut(s) 228, 586, 934, 984, 1100, 1120
MaeI CTAG 1 cut(s) 141
MaeII ACGT 1 cut(s) 569
MaeIII GTNAC 4 cut(s) 295, 352, 413, 634
MalI GATC 5 cut(s) 318, 694, 920, 1119, 1187
MboI GATC 5 cut(s) 316, 692, 918, 1117, 1185
MboII GAAGA 1 cut(s) 303
MfeI CAATTG 1 cut(s) 387
MflI RGATCY 1 cut(s) 1117
MhlI GDGCHC 1 cut(s) 334
MluCI AATT 6 cut(s) 346, 370, 387, 486, 668, 822
MlyI GAGTC 1 cut(s) 303
MroI TCCGGA 1 cut(s) 910
MseI TTAA 4 cut(s) 282, 395, 825, 1082
MslI CAYNNNNRTG 2 cut(s) 102, 1151
MspA1I CMGCKG 2 cut(s) 900, 1073
MspCI CTTAAG 1 cut(s) 394
MspI CCGG 2 cut(s) 881, 911
MspR9I CCNGG 1 cut(s) 1135
MunI CAATTG 1 cut(s) 387
Mva1269I GAATGC 1 cut(s) 1167
MvaI CCWGG 1 cut(s) 1135
MvnI CGCG 1 cut(s) 288
MwoI GCNNNNNNNGC 3 cut(s) 431, 1025, 1034
NdeI CATATG 1 cut(s) 751
NdeII GATC 5 cut(s) 316, 692, 918, 1117, 1185
NlaIII CATG 7 cut(s) 101, 121, 169, 412, 761, 1192, 1228
NlaIV GGNNCC 3 cut(s) 16, 909, 1119
NmeAIII GCCGAG 1 cut(s) 744
NmuCI GTSAC 3 cut(s) 295, 352, 413
NspI RCATGY 1 cut(s) 121
OliI CACNNNNGTG 1 cut(s) 1151
PaeR7I CTCGAG 1 cut(s) 1166
PagI TCATGA 1 cut(s) 1188
PceI AGGCCT 2 cut(s) 237, 499
PciI ACATGT 1 cut(s) 117
PcsI WCGNNNNNNNCGW 1 cut(s) 1207
PctI GAATGC 1 cut(s) 1167
PfeI GAWTC 3 cut(s) 30, 206, 772
PkrI GCNGC 4 cut(s) 185, 608, 684, 1030
PleI GAGTC 1 cut(s) 302
PpsI GAGTC 1 cut(s) 302
PscI ACATGT 1 cut(s) 117
Psp6I CCWGG 1 cut(s) 1133
PspFI CCCAGC 1 cut(s) 1113
PspGI CCWGG 1 cut(s) 1133
PspN4I GGNNCC 3 cut(s) 16, 909, 1119
PsuI RGATCY 1 cut(s) 1117
RsaI GTAC 5 cut(s) 112, 457, 663, 699, 935
RsaNI GTAC 5 cut(s) 111, 456, 662, 698, 934
RseI CAYNNNNRTG 2 cut(s) 102, 1151
SaqAI TTAA 4 cut(s) 282, 395, 825, 1082
SatI GCNGC 4 cut(s) 184, 607, 683, 1029
Sau3AI GATC 5 cut(s) 316, 692, 918, 1117, 1185
SchI GAGTC 1 cut(s) 303
ScrFI CCNGG 1 cut(s) 1135
SduI GDGCHC 1 cut(s) 334
SfaNI GCATC 6 cut(s) 228, 586, 934, 984, 1100, 1120
SfcI CTRYAG 1 cut(s) 171
Sfr274I CTCGAG 1 cut(s) 1166
SlaI CTCGAG 1 cut(s) 1166
SmiMI CAYNNNNRTG 2 cut(s) 102, 1151
SmlI CTYRAG 4 cut(s) 75, 365, 394, 1166
SmoI CTYRAG 4 cut(s) 75, 365, 394, 1166
Sse9I AATT 6 cut(s) 346, 370, 387, 486, 668, 822
SseBI AGGCCT 2 cut(s) 237, 499
SsiI CCGC 4 cut(s) 288, 682, 898, 1071
SspMI CTAG 1 cut(s) 141
StuI AGGCCT 2 cut(s) 237, 499
StyD4I CCNGG 1 cut(s) 1133
StyI CCWWGG 1 cut(s) 232
TaaI ACNGT 5 cut(s) 131, 540, 702, 1087, 1198
TaiI ACGT 1 cut(s) 572
TaqI TCGA 2 cut(s) 1007, 1167
TasI AATT 6 cut(s) 346, 370, 387, 486, 668, 822
TauI GCSGC 1 cut(s) 685
TfiI GAWTC 3 cut(s) 30, 206, 772
Tru1I TTAA 4 cut(s) 282, 395, 825, 1082
Tru9I TTAA 4 cut(s) 282, 395, 825, 1082
TscAI CASTG 3 cut(s) 31, 316, 1026
TseFI GTSAC 3 cut(s) 295, 352, 413
TseI GCWGC 3 cut(s) 183, 606, 1028
Tsp45I GTSAC 3 cut(s) 295, 352, 413
TspDTI ATGAA 1 cut(s) 746
TspGWI ACGGA 5 cut(s) 340, 480, 881, 990, 1046
TspRI CASTG 3 cut(s) 31, 316, 1026
Vha464I CTTAAG 1 cut(s) 394
XapI RAATTY 1 cut(s) 486
XceI RCATGY 1 cut(s) 121
XhoI CTCGAG 1 cut(s) 1166
XspI CTAG 1 cut(s) 141
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.