pycom04g00180

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
Physical Location & Seq
Forward (+)
143536 .. 147581
4046 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom04g00180.1

Sequence Viewer

Length: 1206 bp
ATGTGGAACAAGTTGGAAAGCGGTGCCAAATTCACTGGAATTATTGGTCTAAACAACCATGATAACAACTATGACGATTTGTCACAAGGATTCTACCTCAAACTCCAGGAGGGCGAGGGTACCAACATGTCCATTGACAGTATGCAAATGAGCAACGACGGAGGCTCTGTGGCCATGTCTGTAGACAACAGCAGCATTGCTTCAAATACTAATGATTCCCACACTCGAATCTTGAACCACCAAGGGCTGCGGCGACGTACTAAGGATAACTACTCTGTGCAACAGAGTGTTAATCCCCGAGGAAGAGTCACACATGCTCTAAGTCATGATCAACTGGCTCGAGCTCTATTGGACAGCCATTCCTTGACAGAGGGGCTTGAGGATTATGAGGACTGGACAATTGACTTAAGAAAGCTAAACATGGGTGAAGCTTTTGCACAAGGTGCTTTTGGGAAGCTATACAGAGGTACCTACAATGGAGAAGATGTTGCCATCAAACTTTTGGAGCGGCCAGAAAATGACCCAGAAAGGGCTCAGGTGATGGAGCAGCAGTTTCAACAGGAAGTCAAGATGCTGGCTAATTTGAAGCATCCAAACATAGTTCGTTTCATTGGTGCTTGCCGTAAACCAATGGTTTGGTGCATTGTAACAGAGTATGCTAAGGGGGGTTCAGTTAGGCAGTTCTTGGCGAAGCGGCAGAGCCGATCAGTTCCATTGAAATTAGCAGTCAAGCAAGCTTTGGATGTCGCGAGGGGGTTTGCGTATGTTCATGGGCTCGGTCTGATTCACAGGGACTTGAAATCTGACAACCTGTTGATTTCGTCTGACAAGTCTATAAAAATTGCTGATTTTGGAGTTGCCCGTATTGAGGTGCAGACAGAAGGAATGACTCCAGAGACTGGGACATACCGCTGGATGGCACCGGAGATGATCCAGCACAGGCATTACACACAGAAAGTTGACGTTTATAGCTTTGGGATAGTTCTTTGGGAACTTATAACAGGGATGCTTCCATTCCAGAACATGACAGCAGTACAGGCAGCATTTGCAGTTGTTAATAAGAGTGTCCGCCCTAACATTCCGAATGACTGCTTACCTGTTCTTTGTGAGATTATGACGAGATGTTGGGATGCTAACCCTGATGTGAGGCCATCCTTCACTGAAGTCGTGAGAATGCTCGAGCATGCAGAGACTGATCGATCATGA

Protein Analysis

402

Amino Acids

45.24

Weight (kDa)

6.47

Isoelectric Point (pI)

41.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 140 - 393 9.9e-67 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 146 - 391 3e-56 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 998
Acc65I GGTACC 2 cut(s) 119, 467
AccB1I GGYRCC 4 cut(s) 23, 119, 467, 919
AccB7I CCANNNNNTGG 1 cut(s) 899
AccBSI CCGCTC 1 cut(s) 508
AccI GTMKAC 1 cut(s) 183
AccII CGCG 1 cut(s) 749
AciI CCGC 6 cut(s) 21, 250, 508, 694, 910, 1069
AclWI GGATC 1 cut(s) 925
AcoI YGGCCR 2 cut(s) 171, 509
AcsI RAATTY 1 cut(s) 29
AcuI CTGAAG 1 cut(s) 1182
AdeI CACNNNGTG 1 cut(s) 443
AfaI GTAC 4 cut(s) 121, 259, 469, 1035
AfiI CCNNNNNNNGG 4 cut(s) 529, 868, 899, 916
AflII CTTAAG 1 cut(s) 406
AflIII ACRYGT 1 cut(s) 126
AgsI TTSAA 6 cut(s) 204, 235, 557, 586, 718, 799
AhdI GACNNNNNGTC 1 cut(s) 79
AjnI CCWGG 1 cut(s) 105
AluBI AGCT 6 cut(s) 344, 415, 431, 457, 737, 972
AluI AGCT 6 cut(s) 344, 415, 431, 457, 737, 972
Alw21I GWGCWC 1 cut(s) 346
Alw26I GTCTC 2 cut(s) 890, 1184
AlwI GGATC 1 cut(s) 925
AlwNI CAGNNNCTG 2 cut(s) 899, 1193
Ama87I CYCGRG 3 cut(s) 297, 339, 1178
AoxI GGCC 3 cut(s) 171, 509, 1148
ApeKI GCWGC 4 cut(s) 192, 247, 547, 1040
ApoI RAATTY 1 cut(s) 29
Asp718I GGTACC 2 cut(s) 119, 467
AsuHPI GGTGA 2 cut(s) 437, 550
AvaI CYCGRG 3 cut(s) 297, 339, 1178
BaeI ACNNNNGTAYC 2 cut(s) 451, 484
BalI TGGCCA 1 cut(s) 173
BanI GGYRCC 4 cut(s) 23, 119, 467, 919
BanII GRGCYC 3 cut(s) 346, 535, 777
Bbv12I GWGCWC 1 cut(s) 346
BbvI GCAGC 4 cut(s) 204, 234, 559, 1052
BccI CCATC 4 cut(s) 500, 535, 910, 1159
BceAI ACGGC 1 cut(s) 606
BciT130I CCWGG 1 cut(s) 107
BclI TGATCA 1 cut(s) 328
BcoDI GTCTC 2 cut(s) 890, 1184
BfmI CTRYAG 1 cut(s) 180
BfrI CTTAAG 1 cut(s) 406
BisI GCNGC 7 cut(s) 193, 248, 251, 509, 548, 695, 1041
BlsI GCNGC 7 cut(s) 194, 249, 252, 510, 549, 696, 1042
Bme1390I CCNGG 1 cut(s) 107
BmeRI GACNNNNNGTC 1 cut(s) 79
BmeT110I CYCGRG 3 cut(s) 297, 339, 1178
BmiI GGNNCC 4 cut(s) 25, 121, 469, 921
BmrFI CCNGG 1 cut(s) 107
BmrI ACTGGG 1 cut(s) 909
BmsI GCATC 4 cut(s) 561, 598, 996, 1120
BmuI ACTGGG 1 cut(s) 909
BpmI CTGGAG 2 cut(s) 89, 876
Bpu10I CCTNAGC 2 cut(s) 534, 660
BpuEI CTTGAG 1 cut(s) 398
Bsa29I ATCGAT 1 cut(s) 1198
BsaJI CCNNGG 2 cut(s) 241, 298
BsaWI WCCGGW 1 cut(s) 922
BsaXI ACNNNNNCTCC 6 cut(s) 153, 183, 471, 501, 536, 566
Bsc4I CCNNNNNNNGG 4 cut(s) 529, 868, 899, 916
Bse1I ACTGG 4 cut(s) 40, 339, 398, 904
Bse3DI GCAATG 1 cut(s) 195
BseBI CCWGG 1 cut(s) 107
BseCI ATCGAT 1 cut(s) 1198
BseDI CCNNGG 2 cut(s) 241, 298
BseGI GGATG 6 cut(s) 589, 748, 921, 1011, 1135, 1151
BseLI CCNNNNNNNGG 4 cut(s) 529, 868, 899, 916
BseMI GCAATG 1 cut(s) 195
BseMII CTCAG 1 cut(s) 548
BseNI ACTGG 4 cut(s) 40, 339, 398, 904
BseXI GCAGC 4 cut(s) 204, 234, 559, 1052
BsgI GTGCAG 1 cut(s) 893
Bsh1236I CGCG 1 cut(s) 749
BshFI GGCC 3 cut(s) 173, 511, 1150
BshNI GGYRCC 4 cut(s) 23, 119, 467, 919
BshVI ATCGAT 1 cut(s) 1198
BsiHKAI GWGCWC 1 cut(s) 346
BsiHKCI CYCGRG 3 cut(s) 297, 339, 1178
BsiSI CCGG 1 cut(s) 923
BslFI GGGAC 2 cut(s) 806, 916
BslI CCNNNNNNNGG 4 cut(s) 529, 868, 899, 916
BsmAI GTCTC 2 cut(s) 890, 1184
BsmFI GGGAC 2 cut(s) 806, 916
BsmI GAATGC 1 cut(s) 1179
BsnI GGCC 3 cut(s) 173, 511, 1150
BsoBI CYCGRG 3 cut(s) 297, 339, 1178
Bsp1286I GDGCHC 3 cut(s) 346, 535, 777
Bsp143I GATC 5 cut(s) 328, 704, 930, 1195, 1199
Bsp68I TCGCGA 1 cut(s) 749
BspACI CCGC 6 cut(s) 21, 250, 508, 694, 910, 1069
BspANI GGCC 3 cut(s) 173, 511, 1150
BspCNI CTCAG 1 cut(s) 547
BspDI ATCGAT 1 cut(s) 1198
BspFNI CGCG 1 cut(s) 749
BspHI TCATGA 2 cut(s) 325, 1202
BspLI GGNNCC 4 cut(s) 25, 121, 469, 921
BspPI GGATC 1 cut(s) 925
BspT107I GGYRCC 4 cut(s) 23, 119, 467, 919
BspTI CTTAAG 1 cut(s) 406
BsrBI CCGCTC 1 cut(s) 508
BsrDI GCAATG 1 cut(s) 195
BsrI ACTGG 4 cut(s) 40, 339, 398, 904
BssECI CCNNGG 2 cut(s) 241, 298
BssMI GATC 5 cut(s) 328, 704, 930, 1195, 1199
BssT1I CCWWGG 1 cut(s) 241
Bst2UI CCWGG 1 cut(s) 107
Bst4CI ACNGT 1 cut(s) 140
Bst6I CTCTTC 1 cut(s) 298
BstAFI CTTAAG 1 cut(s) 406
BstAPI GCANNNNNTGC 2 cut(s) 443, 1046
BstC8I GCNNGC 4 cut(s) 576, 619, 735, 1185
BstDEI CTNAG 4 cut(s) 261, 320, 534, 660
BstF5I GGATG 6 cut(s) 589, 748, 921, 1011, 1135, 1151
BstFNI CGCG 1 cut(s) 749
BstKTI GATC 5 cut(s) 331, 707, 933, 1198, 1202
BstMAI GTCTC 2 cut(s) 890, 1184
BstMBI GATC 5 cut(s) 328, 704, 930, 1195, 1199
BstMWI GCNNNNNNNGC 3 cut(s) 443, 1037, 1046
BstNI CCWGG 1 cut(s) 107
BstNSI RCATGY 3 cut(s) 130, 317, 1187
BstSCI CCNGG 1 cut(s) 105
BstSFI CTRYAG 1 cut(s) 180
BstUI CGCG 1 cut(s) 749
BstV1I GCAGC 4 cut(s) 204, 234, 559, 1052
BstXI CCANNNNNNTGG 1 cut(s) 636
Bsu15I ATCGAT 1 cut(s) 1198
BsuRI GGCC 3 cut(s) 173, 511, 1150
BsuTUI ATCGAT 1 cut(s) 1198
BtsCI GGATG 6 cut(s) 589, 748, 921, 1011, 1135, 1151
BtsIMutI CAGTG 2 cut(s) 33, 1158
BtuMI TCGCGA 1 cut(s) 749
Cac8I GCNNGC 4 cut(s) 576, 619, 735, 1185
CaiI CAGNNNCTG 2 cut(s) 899, 1193
CciI TCATGA 2 cut(s) 325, 1202
ClaI ATCGAT 1 cut(s) 1198
Csp6I GTAC 4 cut(s) 120, 258, 468, 1034
CviQI GTAC 4 cut(s) 120, 258, 468, 1034
DdeI CTNAG 4 cut(s) 261, 320, 534, 660
DpnI GATC 5 cut(s) 330, 706, 932, 1197, 1201
DpnII GATC 5 cut(s) 328, 704, 930, 1195, 1199
DraIII CACNNNGTG 1 cut(s) 443
DriI GACNNNNNGTC 1 cut(s) 79
EaeI YGGCCR 2 cut(s) 171, 509
Eam1104I CTCTTC 1 cut(s) 298
Eam1105I GACNNNNNGTC 1 cut(s) 79
EarI CTCTTC 1 cut(s) 298
EciI GGCGGA 1 cut(s) 1058
Ecl136II GAGCTC 1 cut(s) 344
Eco130I CCWWGG 1 cut(s) 241
Eco24I GRGCYC 3 cut(s) 346, 535, 777
Eco53kI GAGCTC 1 cut(s) 344
Eco57I CTGAAG 1 cut(s) 1182
Eco88I CYCGRG 3 cut(s) 297, 339, 1178
EcoICRI GAGCTC 1 cut(s) 344
EcoRII CCWGG 1 cut(s) 105
EcoT14I CCWWGG 1 cut(s) 241
EcoT38I GRGCYC 3 cut(s) 346, 535, 777
ErhI CCWWGG 1 cut(s) 241
FaqI GGGAC 2 cut(s) 806, 916
FbaI TGATCA 1 cut(s) 328
FblI GTMKAC 1 cut(s) 183
Fnu4HI GCNGC 7 cut(s) 193, 248, 251, 509, 548, 695, 1041
FokI GGATG 6 cut(s) 576, 755, 928, 1018, 1138, 1142
FriOI GRGCYC 3 cut(s) 346, 535, 777
Fsp4HI GCNGC 7 cut(s) 193, 248, 251, 509, 548, 695, 1041
GluI GCNGC 7 cut(s) 193, 248, 251, 509, 548, 695, 1041
GsuI CTGGAG 2 cut(s) 89, 876
HaeIII GGCC 3 cut(s) 173, 511, 1150
HapII CCGG 1 cut(s) 923
HincII GTYRAC 1 cut(s) 961
HindII GTYRAC 1 cut(s) 961
HindIII AAGCTT 2 cut(s) 429, 735
HinfI GANTC 6 cut(s) 90, 215, 228, 306, 784, 889
HpaII CCGG 1 cut(s) 923
HphI GGTGA 2 cut(s) 437, 550
Hpy166II GTNNAC 3 cut(s) 184, 626, 961
Hpy188I TCNGA 4 cut(s) 783, 805, 826, 1083
Hpy188III TCNNGA 8 cut(s) 232, 326, 568, 748, 893, 1018, 1168, 1203
Hpy8I GTNNAC 3 cut(s) 184, 626, 961
Hpy99I CGWCG 2 cut(s) 161, 258
HpyAV CCTTC 2 cut(s) 875, 1165
HpyCH4III ACNGT 1 cut(s) 140
HpyCH4IV ACGT 2 cut(s) 256, 963
HpyCH4V TGCA 7 cut(s) 145, 280, 437, 642, 874, 1049, 1187
HpyF10VI GCNNNNNNNGC 3 cut(s) 443, 1037, 1046
HpyF3I CTNAG 4 cut(s) 261, 320, 534, 660
HpySE526I ACGT 2 cut(s) 256, 963
KpnI GGTACC 2 cut(s) 123, 471
Ksp22I TGATCA 1 cut(s) 328
Kzo9I GATC 5 cut(s) 328, 704, 930, 1195, 1199
LmnI GCTCC 2 cut(s) 505, 544
Lsp1109I GCAGC 4 cut(s) 204, 234, 559, 1052
LweI GCATC 4 cut(s) 561, 598, 996, 1120
MaeII ACGT 2 cut(s) 256, 963
MaeIII GTNAC 3 cut(s) 81, 307, 646
MalI GATC 5 cut(s) 330, 706, 932, 1197, 1201
MbiI CCGCTC 1 cut(s) 508
MboI GATC 5 cut(s) 328, 704, 930, 1195, 1199
MboII GAAGA 2 cut(s) 315, 494
MfeI CAATTG 1 cut(s) 399
MhlI GDGCHC 3 cut(s) 346, 535, 777
MlsI TGGCCA 1 cut(s) 173
MluCI AATT 6 cut(s) 29, 39, 399, 580, 719, 840
MluNI TGGCCA 1 cut(s) 173
MlyI GAGTC 2 cut(s) 315, 883
Mox20I TGGCCA 1 cut(s) 173
MscI TGGCCA 1 cut(s) 173
MseI TTAA 3 cut(s) 291, 407, 1056
Msp20I TGGCCA 1 cut(s) 173
MspA1I CMGCKG 1 cut(s) 912
MspCI CTTAAG 1 cut(s) 406
MspI CCGG 1 cut(s) 923
MspR9I CCNGG 1 cut(s) 107
MunI CAATTG 1 cut(s) 399
Mva1269I GAATGC 1 cut(s) 1179
MvaI CCWGG 1 cut(s) 107
MvnI CGCG 1 cut(s) 749
MwoI GCNNNNNNNGC 3 cut(s) 443, 1037, 1046
NdeII GATC 5 cut(s) 328, 704, 930, 1195, 1199
NlaIV GGNNCC 4 cut(s) 25, 121, 469, 921
NmuCI GTSAC 2 cut(s) 81, 307
NruI TCGCGA 1 cut(s) 749
NspI RCATGY 3 cut(s) 130, 317, 1187
PaeI GCATGC 1 cut(s) 1187
PaeR7I CTCGAG 2 cut(s) 339, 1178
PagI TCATGA 2 cut(s) 325, 1202
PciI ACATGT 1 cut(s) 126
PctI GAATGC 1 cut(s) 1179
PfeI GAWTC 4 cut(s) 90, 215, 228, 784
PflMI CCANNNNNTGG 1 cut(s) 899
PfoI TCCNGGA 1 cut(s) 105
PkrI GCNGC 7 cut(s) 194, 249, 252, 510, 549, 696, 1042
PleI GAGTC 2 cut(s) 314, 883
PpsI GAGTC 2 cut(s) 314, 883
PscI ACATGT 1 cut(s) 126
PsiI TTATAA 1 cut(s) 998
Psp124BI GAGCTC 1 cut(s) 346
Psp6I CCWGG 1 cut(s) 105
PspGI CCWGG 1 cut(s) 105
PspN4I GGNNCC 4 cut(s) 25, 121, 469, 921
PspXI VCTCGAGB 2 cut(s) 339, 1178
PstNI CAGNNNCTG 2 cut(s) 899, 1193
RruI TCGCGA 1 cut(s) 749
RsaI GTAC 4 cut(s) 121, 259, 469, 1035
RsaNI GTAC 4 cut(s) 120, 258, 468, 1034
SacI GAGCTC 1 cut(s) 346
SaqAI TTAA 3 cut(s) 291, 407, 1056
SatI GCNGC 7 cut(s) 193, 248, 251, 509, 548, 695, 1041
Sau3AI GATC 5 cut(s) 328, 704, 930, 1195, 1199
SchI GAGTC 2 cut(s) 315, 883
ScrFI CCNGG 1 cut(s) 107
SduI GDGCHC 3 cut(s) 346, 535, 777
SfaNI GCATC 4 cut(s) 561, 598, 996, 1120
SfcI CTRYAG 1 cut(s) 180
Sfr274I CTCGAG 2 cut(s) 339, 1178
SlaI CTCGAG 2 cut(s) 339, 1178
SmlI CTYRAG 4 cut(s) 339, 377, 406, 1178
SmoI CTYRAG 4 cut(s) 339, 377, 406, 1178
SphI GCATGC 1 cut(s) 1187
Sse9I AATT 6 cut(s) 29, 39, 399, 580, 719, 840
SsiI CCGC 6 cut(s) 21, 250, 508, 694, 910, 1069
SstI GAGCTC 1 cut(s) 346
StyD4I CCNGG 1 cut(s) 105
StyI CCWWGG 1 cut(s) 241
TaaI ACNGT 1 cut(s) 140
TaiI ACGT 2 cut(s) 259, 966
TaqI TCGA 4 cut(s) 226, 340, 1179, 1198
TaqII GACCGA 1 cut(s) 767
TasI AATT 6 cut(s) 29, 39, 399, 580, 719, 840
TatI WGTACW 1 cut(s) 1033
TauI GCSGC 3 cut(s) 253, 511, 697
TfiI GAWTC 4 cut(s) 90, 215, 228, 784
Tru1I TTAA 3 cut(s) 291, 407, 1056
Tru9I TTAA 3 cut(s) 291, 407, 1056
TscAI CASTG 2 cut(s) 40, 1165
TseFI GTSAC 2 cut(s) 81, 307
TseI GCWGC 4 cut(s) 192, 247, 547, 1040
Tsp45I GTSAC 2 cut(s) 81, 307
TspDTI ATGAA 2 cut(s) 598, 758
TspGWI ACGGA 1 cut(s) 174
TspRI CASTG 2 cut(s) 40, 1165
Van91I CCANNNNNTGG 1 cut(s) 899
Vha464I CTTAAG 1 cut(s) 406
XapI RAATTY 1 cut(s) 29
XceI RCATGY 3 cut(s) 130, 317, 1187
XcmI CCANNNNNNNNNTGG 1 cut(s) 499
XhoI CTCGAG 2 cut(s) 339, 1178
XmiI GTMKAC 1 cut(s) 183
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.