MD00G1091600.v1.1

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr00
Physical Location & Seq
Reverse (-)
19098157 .. 19101176
3020 bp
Loading structure...
UTR
Exon/CDS
Intron
MD00G1091600.v1.1.491

Sequence Viewer

Length: 1044 bp
ATGTTGGAGGGCGGCGCCAAATTCACTGGAATAATTGGTCTAACCAACCATGGTAACAACTATGATGATTTGTCGCAAGGCTTCTACCACAAACTCCATGAGGGTGAGGGTACCAACATGTCCATTGACAGTATGCAAACGAGCAATGATGGAGGCTCTGTGACCATGTCTGTAGACAACAGCAGCGTTGCTTCAAATACTAATGATTCCCACACTCGCATCTTGAACCACCAAGGGCTGCGGCGACGTGTTAAGGATAACTATTCTGTGCAACAGAGTGTTAATCGCCGAGGAAGAGTCACACATGCTCTAAGTCATGATCAACTTGCTCGAGCTCTACTGGACAGCCATTCCTTGACAGAGGGGCTTGAGAATTATGAGGACTGGACAATTGACTTAAGAAAGCTAAACATGGGTGAAGCTTTTGCACAAGGTGCTTTTGGGAAGCTATATAGAGGTACCTACAATGGTGAAGATGTTGCCATCAAACTTTTGGAGCGGCCTGAAAATGACCCAGAAAGGGCTCAGCTGATGGAGCAGCAGTTTCAACAGGAAGTCAAGATGCTGGCTACATTGAAGCATCCAAACATAGTTCGTTTCATTGGTGCCTGCCGTAAGCCAATGGTTTGGTGCATTGTAACAGAGTATGCTAAGGGGGGTTCACTTAGGCAGTTCTTGGCGAAGCGGCAGAGCCGATCGGTTCCATTGAAATTAGCAGTCAAGCAAGCTTTGGATGTTGCGAGGGGGTTTGCGTATGTTCATGGGCTCGGTCTGATTCACCGGGACTTGAAATCTGACAACCTGTTGATTTCTTCAGACAAATCTATAAAAATTGCTGATTTTGGAGTTGCCCGTATTGAGGTGCAGACGGAAGGAATGACTCCGGAGACTGGGACATACCGCTGGATGGCGCCATTTTGCTTGCATTTCTTGAGATTTAGAGTGTCTATGTTAGAGAAGTTCTTGAACTTACCTTGGAGAGTACTTGTCTTTTTCCATAATGAGCATGAGCGATACACTAAGGTTCTCTGTTTACGTCTTTGA

Protein Analysis

348

Amino Acids

39.43

Weight (kDa)

9.06

Isoelectric Point (pI)

38.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 137 - 314 5.4e-39 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 143 - 307 2e-37 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 2 cut(s) 110, 458
AccB1I GGYRCC 5 cut(s) 14, 110, 458, 605, 910
AccBSI CCGCTC 1 cut(s) 499
AccI GTMKAC 1 cut(s) 174
AccIII TCCGGA 1 cut(s) 883
AciI CCGC 5 cut(s) 12, 241, 499, 685, 901
AcsI RAATTY 1 cut(s) 20
AcuI CTGAAG 1 cut(s) 798
AcyI GRCGYC 2 cut(s) 15, 911
AdeI CACNNNGTG 1 cut(s) 434
AfaI GTAC 3 cut(s) 112, 460, 984
AfiI CCNNNNNNNGG 4 cut(s) 520, 859, 890, 907
AflII CTTAAG 1 cut(s) 397
AflIII ACRYGT 2 cut(s) 117, 247
AgsI TTSAA 7 cut(s) 195, 226, 548, 577, 709, 790, 967
AjiI CACGTC 1 cut(s) 248
AluBI AGCT 6 cut(s) 335, 406, 422, 448, 529, 728
AluI AGCT 6 cut(s) 335, 406, 422, 448, 529, 728
Alw21I GWGCWC 1 cut(s) 337
Alw26I GTCTC 1 cut(s) 881
Ama87I CYCGRG 1 cut(s) 330
Aor13HI TCCGGA 1 cut(s) 883
AoxI GGCC 1 cut(s) 500
ApeKI GCWGC 3 cut(s) 183, 238, 538
ApoI RAATTY 1 cut(s) 20
Asp718I GGTACC 2 cut(s) 110, 458
AspLEI GCGC 2 cut(s) 17, 913
AsuC2I CCSGG 1 cut(s) 782
AsuHPI GGTGA 4 cut(s) 116, 428, 482, 770
AvaI CYCGRG 1 cut(s) 330
BanI GGYRCC 5 cut(s) 14, 110, 458, 605, 910
BanII GRGCYC 3 cut(s) 337, 526, 768
Bbv12I GWGCWC 1 cut(s) 337
BbvI GCAGC 3 cut(s) 195, 225, 550
BccI CCATC 4 cut(s) 143, 491, 526, 901
BceAI ACGGC 1 cut(s) 597
BclI TGATCA 1 cut(s) 319
BcnI CCSGG 1 cut(s) 782
BcoDI GTCTC 1 cut(s) 881
BfmI CTRYAG 1 cut(s) 171
BfoI RGCGCY 2 cut(s) 18, 914
BfrI CTTAAG 1 cut(s) 397
BisI GCNGC 7 cut(s) 13, 184, 239, 242, 500, 539, 686
BlpI GCTNAGC 1 cut(s) 525
BlsI GCNGC 7 cut(s) 14, 185, 240, 243, 501, 540, 687
BmcAI AGTACT 1 cut(s) 984
Bme1390I CCNGG 1 cut(s) 782
BmeT110I CYCGRG 1 cut(s) 330
BmgBI CACGTC 1 cut(s) 248
BmiI GGNNCC 6 cut(s) 16, 112, 460, 607, 702, 912
BmrFI CCNGG 1 cut(s) 782
BmrI ACTGGG 1 cut(s) 900
BmsI GCATC 3 cut(s) 228, 552, 589
BmuI ACTGGG 1 cut(s) 900
Bpu10I CCTNAGC 1 cut(s) 651
Bpu1102I GCTNAGC 1 cut(s) 525
BpuEI CTTGAG 2 cut(s) 389, 952
BpuMI CCSGG 1 cut(s) 782
BsaHI GRCGYC 2 cut(s) 15, 911
BsaJI CCNNGG 4 cut(s) 49, 232, 289, 974
BsaWI WCCGGW 1 cut(s) 883
BsaXI ACNNNNNCTCC 4 cut(s) 144, 174, 527, 557
Bsc4I CCNNNNNNNGG 4 cut(s) 520, 859, 890, 907
Bse1I ACTGG 4 cut(s) 31, 345, 389, 895
Bse3DI GCAATG 1 cut(s) 151
BseAI TCCGGA 1 cut(s) 883
BseDI CCNNGG 4 cut(s) 49, 232, 289, 974
BseGI GGATG 3 cut(s) 580, 739, 912
BseLI CCNNNNNNNGG 4 cut(s) 520, 859, 890, 907
BseMI GCAATG 1 cut(s) 151
BseMII CTCAG 1 cut(s) 539
BseNI ACTGG 4 cut(s) 31, 345, 389, 895
BseXI GCAGC 3 cut(s) 195, 225, 550
BsgI GTGCAG 1 cut(s) 884
Bsh1285I CGRYCG 1 cut(s) 698
BshFI GGCC 1 cut(s) 502
BshNI GGYRCC 5 cut(s) 14, 110, 458, 605, 910
BsiEI CGRYCG 1 cut(s) 698
BsiHKAI GWGCWC 1 cut(s) 337
BsiHKCI CYCGRG 1 cut(s) 330
BsiSI CCGG 2 cut(s) 781, 884
BslFI GGGAC 2 cut(s) 797, 907
BslI CCNNNNNNNGG 4 cut(s) 520, 859, 890, 907
BsmAI GTCTC 1 cut(s) 881
BsmFI GGGAC 2 cut(s) 797, 907
BsnI GGCC 1 cut(s) 502
BsoBI CYCGRG 1 cut(s) 330
Bsp1286I GDGCHC 3 cut(s) 337, 526, 768
Bsp13I TCCGGA 1 cut(s) 883
Bsp143I GATC 2 cut(s) 319, 695
Bsp1720I GCTNAGC 1 cut(s) 525
Bsp19I CCATGG 1 cut(s) 49
BspACI CCGC 5 cut(s) 12, 241, 499, 685, 901
BspANI GGCC 1 cut(s) 502
BspCNI CTCAG 1 cut(s) 538
BspEI TCCGGA 1 cut(s) 883
BspHI TCATGA 1 cut(s) 316
BspLI GGNNCC 6 cut(s) 16, 112, 460, 607, 702, 912
BspT107I GGYRCC 5 cut(s) 14, 110, 458, 605, 910
BspTI CTTAAG 1 cut(s) 397
BsrBI CCGCTC 1 cut(s) 499
BsrDI GCAATG 1 cut(s) 151
BsrI ACTGG 4 cut(s) 31, 345, 389, 895
BssECI CCNNGG 4 cut(s) 49, 232, 289, 974
BssMI GATC 2 cut(s) 319, 695
BssNI GRCGYC 2 cut(s) 15, 911
BssT1I CCWWGG 3 cut(s) 49, 232, 974
Bst4CI ACNGT 1 cut(s) 131
Bst6I CTCTTC 1 cut(s) 289
BstACI GRCGYC 2 cut(s) 15, 911
BstAFI CTTAAG 1 cut(s) 397
BstAPI GCANNNNNTGC 1 cut(s) 434
BstC8I GCNNGC 4 cut(s) 567, 610, 726, 923
BstDEI CTNAG 5 cut(s) 311, 525, 651, 665, 1020
BstDSI CCRYGG 1 cut(s) 49
BstF5I GGATG 3 cut(s) 580, 739, 912
BstH2I RGCGCY 2 cut(s) 18, 914
BstHHI GCGC 2 cut(s) 17, 913
BstKTI GATC 2 cut(s) 322, 698
BstMAI GTCTC 1 cut(s) 881
BstMBI GATC 2 cut(s) 319, 695
BstMCI CGRYCG 1 cut(s) 698
BstMWI GCNNNNNNNGC 2 cut(s) 434, 535
BstNSI RCATGY 2 cut(s) 121, 308
BstSCI CCNGG 1 cut(s) 780
BstSFI CTRYAG 1 cut(s) 171
BstV1I GCAGC 3 cut(s) 195, 225, 550
BstXI CCANNNNNNTGG 1 cut(s) 627
BsuRI GGCC 1 cut(s) 502
BtgI CCRYGG 1 cut(s) 49
BtrI CACGTC 1 cut(s) 248
BtsCI GGATG 3 cut(s) 580, 739, 912
BtsIMutI CAGTG 1 cut(s) 24
Cac8I GCNNGC 4 cut(s) 567, 610, 726, 923
CciI TCATGA 1 cut(s) 316
CfoI GCGC 2 cut(s) 17, 913
Csp6I GTAC 3 cut(s) 111, 459, 983
CviAII CATG 9 cut(s) 50, 98, 118, 166, 305, 317, 412, 761, 1007
CviQI GTAC 3 cut(s) 111, 459, 983
DdeI CTNAG 5 cut(s) 311, 525, 651, 665, 1020
DinI GGCGCC 2 cut(s) 16, 912
DpnI GATC 2 cut(s) 321, 697
DpnII GATC 2 cut(s) 319, 695
DraIII CACNNNGTG 1 cut(s) 434
Eam1104I CTCTTC 1 cut(s) 289
EarI CTCTTC 1 cut(s) 289
Ecl136II GAGCTC 1 cut(s) 335
Eco130I CCWWGG 3 cut(s) 49, 232, 974
Eco24I GRGCYC 3 cut(s) 337, 526, 768
Eco53kI GAGCTC 1 cut(s) 335
Eco57I CTGAAG 1 cut(s) 798
Eco88I CYCGRG 1 cut(s) 330
EcoICRI GAGCTC 1 cut(s) 335
EcoT14I CCWWGG 3 cut(s) 49, 232, 974
EcoT38I GRGCYC 3 cut(s) 337, 526, 768
EgeI GGCGCC 2 cut(s) 16, 912
EheI GGCGCC 2 cut(s) 16, 912
ErhI CCWWGG 3 cut(s) 49, 232, 974
FaeI CATG 9 cut(s) 53, 101, 121, 169, 308, 320, 415, 764, 1010
FaqI GGGAC 2 cut(s) 797, 907
FatI CATG 9 cut(s) 49, 97, 117, 165, 304, 316, 411, 760, 1006
FbaI TGATCA 1 cut(s) 319
FblI GTMKAC 1 cut(s) 174
Fnu4HI GCNGC 7 cut(s) 13, 184, 239, 242, 500, 539, 686
FokI GGATG 3 cut(s) 567, 746, 919
FriOI GRGCYC 3 cut(s) 337, 526, 768
Fsp4HI GCNGC 7 cut(s) 13, 184, 239, 242, 500, 539, 686
GlaI GCGC 2 cut(s) 16, 912
GluI GCNGC 7 cut(s) 13, 184, 239, 242, 500, 539, 686
HaeII RGCGCY 2 cut(s) 18, 914
HaeIII GGCC 1 cut(s) 502
HapII CCGG 2 cut(s) 781, 884
HhaI GCGC 2 cut(s) 17, 913
Hin1I GRCGYC 2 cut(s) 15, 911
Hin1II CATG 9 cut(s) 53, 101, 121, 169, 308, 320, 415, 764, 1010
Hin6I GCGC 2 cut(s) 15, 911
HinP1I GCGC 2 cut(s) 15, 911
HindIII AAGCTT 2 cut(s) 420, 726
HinfI GANTC 4 cut(s) 206, 297, 775, 880
HpaII CCGG 2 cut(s) 781, 884
HphI GGTGA 4 cut(s) 116, 428, 482, 770
Hpy166II GTNNAC 3 cut(s) 175, 662, 1034
Hpy188I TCNGA 3 cut(s) 774, 796, 817
Hpy188III TCNNGA 6 cut(s) 223, 317, 559, 884, 931, 964
Hpy8I GTNNAC 3 cut(s) 175, 662, 1034
Hpy99I CGWCG 1 cut(s) 249
HpyAV CCTTC 1 cut(s) 866
HpyCH4III ACNGT 1 cut(s) 131
HpyCH4IV ACGT 2 cut(s) 247, 1036
HpyCH4V TGCA 6 cut(s) 136, 271, 428, 633, 865, 925
HpyF10VI GCNNNNNNNGC 2 cut(s) 434, 535
HpyF3I CTNAG 5 cut(s) 311, 525, 651, 665, 1020
HpySE526I ACGT 2 cut(s) 247, 1036
Hsp92I GRCGYC 2 cut(s) 15, 911
Hsp92II CATG 9 cut(s) 53, 101, 121, 169, 308, 320, 415, 764, 1010
HspAI GCGC 2 cut(s) 15, 911
KasI GGCGCC 2 cut(s) 14, 910
Kpn2I TCCGGA 1 cut(s) 883
KpnI GGTACC 2 cut(s) 114, 462
Ksp22I TGATCA 1 cut(s) 319
Kzo9I GATC 2 cut(s) 319, 695
LmnI GCTCC 2 cut(s) 496, 535
Lsp1109I GCAGC 3 cut(s) 195, 225, 550
LweI GCATC 3 cut(s) 228, 552, 589
MaeII ACGT 2 cut(s) 247, 1036
MaeIII GTNAC 4 cut(s) 53, 160, 298, 637
MalI GATC 2 cut(s) 321, 697
MbiI CCGCTC 1 cut(s) 499
MboI GATC 2 cut(s) 319, 695
MboII GAAGA 3 cut(s) 306, 485, 804
MfeI CAATTG 1 cut(s) 390
MhlI GDGCHC 3 cut(s) 337, 526, 768
MluCI AATT 6 cut(s) 20, 33, 373, 390, 710, 831
Mly113I GGCGCC 2 cut(s) 15, 911
MlyI GAGTC 2 cut(s) 306, 874
MnlI CCTC 9 cut(s) 94, 100, 146, 284, 355, 373, 449, 735, 853
MroI TCCGGA 1 cut(s) 883
MseI TTAA 3 cut(s) 252, 282, 398
MslI CAYNNNNRTG 1 cut(s) 102
MspA1I CMGCKG 2 cut(s) 529, 903
MspCI CTTAAG 1 cut(s) 397
MspI CCGG 2 cut(s) 781, 884
MspR9I CCNGG 1 cut(s) 782
MunI CAATTG 1 cut(s) 390
MwoI GCNNNNNNNGC 2 cut(s) 434, 535
NarI GGCGCC 2 cut(s) 15, 911
NciI CCSGG 1 cut(s) 782
NcoI CCATGG 1 cut(s) 49
NdeII GATC 2 cut(s) 319, 695
NlaIII CATG 9 cut(s) 53, 101, 121, 169, 308, 320, 415, 764, 1010
NlaIV GGNNCC 6 cut(s) 16, 112, 460, 607, 702, 912
NmeAIII GCCGAG 1 cut(s) 314
NmuCI GTSAC 2 cut(s) 160, 298
NspI RCATGY 2 cut(s) 121, 308
PaeR7I CTCGAG 1 cut(s) 330
PagI TCATGA 1 cut(s) 316
PciI ACATGT 1 cut(s) 117
PfeI GAWTC 2 cut(s) 206, 775
PflFI GACNNNGTC 1 cut(s) 166
PkrI GCNGC 7 cut(s) 14, 185, 240, 243, 501, 540, 687
Ple19I CGATCG 1 cut(s) 698
PleI GAGTC 2 cut(s) 305, 874
PluTI GGCGCC 2 cut(s) 18, 914
PpsI GAGTC 2 cut(s) 305, 874
PscI ACATGT 1 cut(s) 117
Psp124BI GAGCTC 1 cut(s) 337
PspN4I GGNNCC 6 cut(s) 16, 112, 460, 607, 702, 912
PspXI VCTCGAGB 1 cut(s) 330
PsyI GACNNNGTC 1 cut(s) 166
PvuI CGATCG 1 cut(s) 698
PvuII CAGCTG 1 cut(s) 529
RsaI GTAC 3 cut(s) 112, 460, 984
RsaNI GTAC 3 cut(s) 111, 459, 983
RseI CAYNNNNRTG 1 cut(s) 102
SacI GAGCTC 1 cut(s) 337
SaqAI TTAA 3 cut(s) 252, 282, 398
SatI GCNGC 7 cut(s) 13, 184, 239, 242, 500, 539, 686
Sau3AI GATC 2 cut(s) 319, 695
ScaI AGTACT 1 cut(s) 984
SchI GAGTC 2 cut(s) 306, 874
ScrFI CCNGG 1 cut(s) 782
SduI GDGCHC 3 cut(s) 337, 526, 768
SfaNI GCATC 3 cut(s) 228, 552, 589
SfcI CTRYAG 1 cut(s) 171
SfoI GGCGCC 2 cut(s) 16, 912
Sfr274I CTCGAG 1 cut(s) 330
SlaI CTCGAG 1 cut(s) 330
SmiMI CAYNNNNRTG 1 cut(s) 102
SmlI CTYRAG 4 cut(s) 330, 368, 397, 931
SmoI CTYRAG 4 cut(s) 330, 368, 397, 931
Sse9I AATT 6 cut(s) 20, 33, 373, 390, 710, 831
SsiI CCGC 5 cut(s) 12, 241, 499, 685, 901
SspDI GGCGCC 2 cut(s) 14, 910
SstI GAGCTC 1 cut(s) 337
StyD4I CCNGG 1 cut(s) 780
StyI CCWWGG 3 cut(s) 49, 232, 974
TaaI ACNGT 1 cut(s) 131
TaiI ACGT 2 cut(s) 250, 1039
TaqI TCGA 1 cut(s) 331
TaqII GACCGA 1 cut(s) 758
TasI AATT 6 cut(s) 20, 33, 373, 390, 710, 831
TatI WGTACW 1 cut(s) 982
TauI GCSGC 4 cut(s) 15, 244, 502, 688
TfiI GAWTC 2 cut(s) 206, 775
Tru1I TTAA 3 cut(s) 252, 282, 398
Tru9I TTAA 3 cut(s) 252, 282, 398
TscAI CASTG 1 cut(s) 31
TseFI GTSAC 2 cut(s) 160, 298
TseI GCWGC 3 cut(s) 183, 238, 538
Tsp45I GTSAC 2 cut(s) 160, 298
TspDTI ATGAA 2 cut(s) 589, 749
TspGWI ACGGA 1 cut(s) 884
TspRI CASTG 1 cut(s) 31
Tth111I GACNNNGTC 1 cut(s) 166
Vha464I CTTAAG 1 cut(s) 397
XapI RAATTY 1 cut(s) 20
XceI RCATGY 2 cut(s) 121, 308
XcmI CCANNNNNNNNNTGG 1 cut(s) 490
XhoI CTCGAG 1 cut(s) 330
XmiI GTMKAC 1 cut(s) 174
ZrmI AGTACT 1 cut(s) 984
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.