Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002019

Physical Location & Seq

Genomic Coordinates Reverse (-)

15153154 .. 15155742

Gene Structure 2589 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G31170.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1239 bp

ATGCTTGAGAATCCAAAGTTCGATTTGCACGCTGTTGGCAATCACAACAACGACAACAATTACTATGCCTTCACCCAAGACTTTTATCAAAAGCTCGGGGAAGAAGGTACAAACATGTCTGTTGACAGTATGCAGACAAGTAATGCTGGAGGGTCTGTGTCAATGTCTGTCGATAACAGTAGCGTTGGTTCGAGTGATGCTCTTATTGGCCATCCTGGTTTGAAGCCTATGCGCCATCCCTACTCTCTCTCGGATGGCCAAAGCGTATTTCGGCCAGGAAAAGTTACTCATGCACTTAACGATGATGCCTTAGCACAAGCGTTGATGGATAGTAAGTATCCAACCGAGGGACTGGTGAACTATGAAGAGTGGACAATAGATCTGAGGAAACTACATATGGGTCCTGCTTTTGCTCAAGGGGCTTTTGGAAAGTTATACAGAGGGACTTACAACGGAGAAGATGTAGCCATTAAGCTACTCGAGAGGTCAGATAGCAACCCTGAAAAGGCACAAGCCCTCGAACAGCAGTTTCAGCAGGAAGTTTCTATGCTTGCATTTTTGAAGCATCCTAACATCGTTAGGTTTATTGGTGCGTGCATTAAACCGATGGTGTGGTGCATCGTGACTGAATATGCAAAAGGAGGGTCTGTCAGACAGTTTCTGACTAAGAGACAAAACCGAGCTGTGCCTTTGAAGTTAGCTGTTATGCAGGCGTTGGATGTTGCCAGGGGTATGGCTTACGTCCATGAGCGCAACTTTATACACCGGGATCTAAAGTCAGATAACCTCCTCATATCAGCTGATCGGTCCATCAAGATTGCTGATTTTGGTGTTGCAAGAATTGAAGTTCAAACCGAAGGGATGACACCAGAGACTGGAACTTACAGATGGATGGCACCAGAGATGATCCAGCACAGACCCTACACTCAAAAAGTGGACGTGTATAGTTTTGGAATCGTGCTGTGGGAGTTGATTACAGGTCTGTTACCGTTCCAGAACATGACGGCGGTTCAGGCTGCATTTGCAGTGGTGAACAGAGGAGTCCGTCCAACAGTCCCAGCAGATTGTCTTCCTGTGCTTGGAGAGATCATGACACGTTGCTGGGATGCGGACCCTGAAGTCCGTCCTTGTTTTGCAGAGATTGTCAATCTTCTGGAGGCGGCGGAAACTGAGATAATGACGAATGTGAGAAAAGCCCGTTTCAGATGTTGCATGACGCAACCAATGACAGTCGACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase_Tyr

Protein Analysis

412

Amino Acids

46.08

Weight (kDa)

5.97

Isoelectric Point (pI)

30.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PK_Tyr_Ser-Thr	PF07714	134 - 385	1.3e-67	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	139 - 383	5.5e-54	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002019)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G24360 AT4G31170 AT4G31170 AT4G31170 AT4G31170 AT4G31170 AT4G31170 AT4G31170 AT4G31170 AT4G31170 AT4G31170
fragaria_vesca	FvH4_4g00150 FvH4_4g00150 FvH4_4g00150 FvH4_4g00150
malus_domestica	MD00G1091600.v1.1 MD04G1001200.v1.1 MD04G1001300.v1.1 MD13G1286000.v1.1
prunus_persica	Prupe.1G001200_v2.0.a1 Prupe.1G001300_v2.0.a1
pyrus_communis	pycom04g00180 pycom04g00190 pycom420g00210
rosa_chinensis	RchiOBHm_Chr3g0494021 RchiOBHm_Chr4g0384771
rosa_laevigata	RLG00000010273 RLG00000022687
rosa_multiflora	Rmu_sc0001322.1_g000022 Rmu_sc0003412.1_g000004
rosa_roxburghii	Rroxscaffold_5G00332830 Rroxscaffold_6G00391360
rosa_rugosa	Rorug03G0263700 Rorug03G0297500 Rorug03G0297500
rosa_samantha	Rh3AG313300 Rh3BG349400 Rh3CG346200 Rh3DG348700 Rh4AG001100 Rh4BG001000 Rh4CG000900 Rh4DG001000
rosa_wichuraiana	Rw3G027420 Rw4G000780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1118
AccB1I	GGYRCC	1 cut(s)	895
AccB7I	CCANNNNNTGG	1 cut(s)	875
AccI	GTMKAC	1 cut(s)	1233
AciI	CCGC	4 cut(s)	1007, 1109, 1160, 1163
AclWI	GGATC	2 cut(s)	777, 901
AcoI	YGGCCR	3 cut(s)	208, 256, 272
AcuI	CTGAAG	1 cut(s)	1137
AfaI	GTAC	1 cut(s)	109
AfiI	CCNNNNNNNGG	4 cut(s)	347, 505, 875, 1079
AflIII	ACRYGT	3 cut(s)	114, 939, 1094
AgsI	TTSAA	5 cut(s)	223, 562, 694, 845, 851
AjiI	CACGTC	1 cut(s)	940
AjnI	CCWGG	3 cut(s)	214, 274, 725
AjuI	GAANNNNNNNTTGG	2 cut(s)	252, 284
AluBI	AGCT	5 cut(s)	94, 475, 683, 701, 800
AluI	AGCT	5 cut(s)	94, 475, 683, 701, 800
Alw26I	GTCTC	2 cut(s)	664, 866
AlwI	GGATC	2 cut(s)	777, 901
AlwNI	CAGNNNCTG	2 cut(s)	661, 875
Ama87I	CYCGRG	2 cut(s)	95, 479
AoxI	GGCC	3 cut(s)	208, 256, 272
ApeKI	GCWGC	1 cut(s)	1016
ArsI	GACNNNNNNTTYG	2 cut(s)	629, 661
AspLEI	GCGC	2 cut(s)	234, 753
AspS9I	GGNCC	3 cut(s)	401, 807, 1111
AsuC2I	CCSGG	1 cut(s)	767
AsuHPI	GGTGA	3 cut(s)	64, 367, 1042
AvaI	CYCGRG	2 cut(s)	95, 479
AvaII	GGWCC	3 cut(s)	401, 807, 1111
BalI	TGGCCA	2 cut(s)	210, 258
BanI	GGYRCC	1 cut(s)	895
BbsI	GAAGAC	1 cut(s)	1061
BbvI	GCAGC	1 cut(s)	1003
BccI	CCATC	8 cut(s)	219, 243, 248, 319, 601, 818, 882, 886
BceAI	ACGGC	1 cut(s)	1020
BciT130I	CCWGG	3 cut(s)	216, 276, 727
BciVI	GTATCC	1 cut(s)	348
BcnI	CCSGG	1 cut(s)	767
BcoDI	GTCTC	2 cut(s)	664, 866
BfuI	GTATCC	1 cut(s)	348
BglII	AGATCT	1 cut(s)	379
BisI	GCNGC	2 cut(s)	1017, 1161
BlsI	GCNGC	2 cut(s)	1018, 1162
Bme1390I	CCNGG	4 cut(s)	216, 276, 727, 767
Bme18I	GGWCC	3 cut(s)	401, 807, 1111
BmeT110I	CYCGRG	2 cut(s)	95, 479
BmgBI	CACGTC	1 cut(s)	940
BmgT120I	GGNCC	3 cut(s)	401, 807, 1111
BmiI	GGNNCC	3 cut(s)	402, 897, 1113
BmrFI	CCNGG	4 cut(s)	216, 276, 727, 767
BmsI	GCATC	5 cut(s)	187, 295, 574, 627, 1096
BpiI	GAAGAC	1 cut(s)	1061
BplI	GAGNNNNNCTC	2 cut(s)	184, 216
BpmI	CTGGAG	2 cut(s)	168, 1175
Bpu10I	CCTNAGC	1 cut(s)	310
BpuEI	CTTGAG	2 cut(s)	26, 399
BpuMI	CCSGG	1 cut(s)	767
BsaJI	CCNNGG	2 cut(s)	345, 726
BsaXI	ACNNNNNCTCC	6 cut(s)	141, 171, 447, 477, 633, 663
Bsc4I	CCNNNNNNNGG	4 cut(s)	347, 505, 875, 1079
Bse1I	ACTGG	2 cut(s)	357, 880
BseBI	CCWGG	3 cut(s)	216, 276, 727
BseDI	CCNNGG	2 cut(s)	345, 726
BseGI	GGATG	8 cut(s)	211, 235, 259, 565, 724, 867, 897, 1111
BseLI	CCNNNNNNNGG	4 cut(s)	347, 505, 875, 1079
BseMII	CTCAG	2 cut(s)	374, 1161
BseNI	ACTGG	2 cut(s)	357, 880
BseRI	GAGGAG	2 cut(s)	779, 1053
BseXI	GCAGC	1 cut(s)	1003
BseYI	CCCAGC	2 cut(s)	1057, 1101
BshFI	GGCC	3 cut(s)	210, 258, 274
BshNI	GGYRCC	1 cut(s)	895
BsiHKCI	CYCGRG	2 cut(s)	95, 479
BsiSI	CCGG	1 cut(s)	766
BslFI	GGGAC	3 cut(s)	363, 457, 1040
BslI	CCNNNNNNNGG	4 cut(s)	347, 505, 875, 1079
BsmAI	GTCTC	2 cut(s)	664, 866
BsmFI	GGGAC	3 cut(s)	363, 457, 1040
BsnI	GGCC	3 cut(s)	210, 258, 274
BsoBI	CYCGRG	2 cut(s)	95, 479
Bsp143I	GATC	5 cut(s)	379, 769, 802, 906, 1086
BspACI	CCGC	4 cut(s)	1007, 1109, 1160, 1163
BspANI	GGCC	3 cut(s)	210, 258, 274
BspCNI	CTCAG	2 cut(s)	375, 1162
BspHI	TCATGA	1 cut(s)	1089
BspLI	GGNNCC	3 cut(s)	402, 897, 1113
BspPI	GGATC	2 cut(s)	777, 901
BspT107I	GGYRCC	1 cut(s)	895
BsrI	ACTGG	2 cut(s)	357, 880
BssECI	CCNNGG	2 cut(s)	345, 726
BssMI	GATC	5 cut(s)	379, 769, 802, 906, 1086
Bst2UI	CCWGG	3 cut(s)	216, 276, 727
Bst4CI	ACNGT	6 cut(s)	128, 179, 657, 990, 1054, 1231
Bst6I	CTCTTC	1 cut(s)	360
BstC8I	GCNNGC	4 cut(s)	30, 552, 595, 711
BstDEI	CTNAG	4 cut(s)	310, 383, 666, 1170
BstF5I	GGATG	8 cut(s)	211, 235, 259, 565, 724, 867, 897, 1111
BstHHI	GCGC	2 cut(s)	234, 753
BstKTI	GATC	5 cut(s)	382, 772, 805, 909, 1089
BstMAI	GTCTC	2 cut(s)	664, 866
BstMBI	GATC	5 cut(s)	379, 769, 802, 906, 1086
BstMWI	GCNNNNNNNGC	4 cut(s)	419, 532, 1013, 1022
BstNI	CCWGG	3 cut(s)	216, 276, 727
BstNSI	RCATGY	1 cut(s)	118
BstSCI	CCNGG	4 cut(s)	214, 274, 725, 765
BstV1I	GCAGC	1 cut(s)	1003
BstV2I	GAAGAC	1 cut(s)	1061
BstX2I	RGATCY	2 cut(s)	379, 769
BstXI	CCANNNNNNTGG	1 cut(s)	733
BstYI	RGATCY	2 cut(s)	379, 769
BsuI	GTATCC	1 cut(s)	348
BsuRI	GGCC	3 cut(s)	210, 258, 274
BtrI	CACGTC	1 cut(s)	940
BtsCI	GGATG	8 cut(s)	211, 235, 259, 565, 724, 867, 897, 1111
BtsI	GCAGTG	1 cut(s)	1032
BtsIMutI	CAGTG	1 cut(s)	1032
Cac8I	GCNNGC	4 cut(s)	30, 552, 595, 711
CaiI	CAGNNNCTG	2 cut(s)	661, 875
CciI	TCATGA	1 cut(s)	1089
CfoI	GCGC	2 cut(s)	234, 753
Cfr13I	GGNCC	3 cut(s)	401, 807, 1111
CseI	GACGC	1 cut(s)	1225
Csp6I	GTAC	1 cut(s)	108
CviAII	CATG	6 cut(s)	115, 290, 746, 1000, 1090, 1213
CviQI	GTAC	1 cut(s)	108
DdeI	CTNAG	4 cut(s)	310, 383, 666, 1170
DpnI	GATC	5 cut(s)	381, 771, 804, 908, 1088
DpnII	GATC	5 cut(s)	379, 769, 802, 906, 1086
DrdI	GACNNNNNNGTC	1 cut(s)	1118
DseDI	GACNNNNNNGTC	1 cut(s)	1118
EaeI	YGGCCR	3 cut(s)	208, 256, 272
Eam1104I	CTCTTC	1 cut(s)	360
EarI	CTCTTC	1 cut(s)	360
EciI	GGCGGA	1 cut(s)	1178
Eco47I	GGWCC	3 cut(s)	401, 807, 1111
Eco57I	CTGAAG	1 cut(s)	1137
Eco88I	CYCGRG	2 cut(s)	95, 479
EcoO109I	RGGNCCY	1 cut(s)	401
EcoRII	CCWGG	3 cut(s)	214, 274, 725
FaeI	CATG	6 cut(s)	118, 293, 749, 1003, 1093, 1216
FaqI	GGGAC	3 cut(s)	363, 457, 1040
FatI	CATG	6 cut(s)	114, 289, 745, 999, 1089, 1212
FauNDI	CATATG	1 cut(s)	396
FblI	GTMKAC	1 cut(s)	1233
Fnu4HI	GCNGC	2 cut(s)	1017, 1161
FokI	GGATG	8 cut(s)	198, 222, 266, 552, 731, 874, 904, 1118
Fsp4HI	GCNGC	2 cut(s)	1017, 1161
GlaI	GCGC	2 cut(s)	233, 752
GluI	GCNGC	2 cut(s)	1017, 1161
GsaI	CCCAGC	2 cut(s)	1061, 1105
GsuI	CTGGAG	2 cut(s)	168, 1175
HaeIII	GGCC	3 cut(s)	210, 258, 274
HapII	CCGG	1 cut(s)	766
HgaI	GACGC	1 cut(s)	1225
HhaI	GCGC	2 cut(s)	234, 753
Hin1II	CATG	6 cut(s)	118, 293, 749, 1003, 1093, 1216
Hin6I	GCGC	2 cut(s)	232, 751
HinP1I	GCGC	2 cut(s)	232, 751
HincII	GTYRAC	2 cut(s)	124, 1234
HindII	GTYRAC	2 cut(s)	124, 1234
HinfI	GANTC	3 cut(s)	10, 954, 1041
HpaII	CCGG	1 cut(s)	766
HphI	GGTGA	3 cut(s)	64, 367, 1042
Hpy166II	GTNNAC	6 cut(s)	124, 358, 372, 937, 1033, 1234
Hpy188I	TCNGA	7 cut(s)	253, 384, 490, 653, 663, 781, 1205
Hpy188III	TCNNGA	6 cut(s)	481, 622, 814, 994, 1090, 1154
Hpy8I	GTNNAC	6 cut(s)	124, 358, 372, 937, 1033, 1234
HpyAV	CCTTC	3 cut(s)	79, 98, 851
HpyCH4III	ACNGT	6 cut(s)	128, 179, 657, 990, 1054, 1231
HpyCH4IV	ACGT	3 cut(s)	741, 939, 1096
HpyF10VI	GCNNNNNNNGC	4 cut(s)	419, 532, 1013, 1022
HpyF3I	CTNAG	4 cut(s)	310, 383, 666, 1170
HpySE526I	ACGT	3 cut(s)	741, 939, 1096
Hsp92II	CATG	6 cut(s)	118, 293, 749, 1003, 1093, 1216
HspAI	GCGC	2 cut(s)	232, 751
Kzo9I	GATC	5 cut(s)	379, 769, 802, 906, 1086
Lsp1109I	GCAGC	1 cut(s)	1003
LweI	GCATC	5 cut(s)	187, 295, 574, 627, 1096
MaeII	ACGT	3 cut(s)	741, 939, 1096
MaeIII	GTNAC	3 cut(s)	283, 622, 984
MalI	GATC	5 cut(s)	381, 771, 804, 908, 1088
MboI	GATC	5 cut(s)	379, 769, 802, 906, 1086
MboII	GAAGA	5 cut(s)	113, 377, 470, 1061, 1142
MflI	RGATCY	2 cut(s)	379, 769
MlsI	TGGCCA	2 cut(s)	210, 258
MluCI	AATT	2 cut(s)	58, 840
MluNI	TGGCCA	2 cut(s)	210, 258
MlyI	GAGTC	1 cut(s)	1050
MmeI	TCCRAC	3 cut(s)	365, 696, 1073
Mox20I	TGGCCA	2 cut(s)	210, 258
MscI	TGGCCA	2 cut(s)	210, 258
MseI	TTAA	3 cut(s)	297, 471, 600
Msp20I	TGGCCA	2 cut(s)	210, 258
MspA1I	CMGCKG	1 cut(s)	800
MspI	CCGG	1 cut(s)	766
MspR9I	CCNGG	4 cut(s)	216, 276, 727, 767
MvaI	CCWGG	3 cut(s)	216, 276, 727
MwoI	GCNNNNNNNGC	4 cut(s)	419, 532, 1013, 1022
NciI	CCSGG	1 cut(s)	767
NdeI	CATATG	1 cut(s)	396
NdeII	GATC	5 cut(s)	379, 769, 802, 906, 1086
NlaIII	CATG	6 cut(s)	118, 293, 749, 1003, 1093, 1216
NlaIV	GGNNCC	3 cut(s)	402, 897, 1113
NmuCI	GTSAC	1 cut(s)	622
NspI	RCATGY	1 cut(s)	118
PaeR7I	CTCGAG	1 cut(s)	479
PagI	TCATGA	1 cut(s)	1089
PciI	ACATGT	1 cut(s)	114
PfeI	GAWTC	2 cut(s)	10, 954
PflMI	CCANNNNNTGG	1 cut(s)	875
PkrI	GCNGC	2 cut(s)	1018, 1162
PleI	GAGTC	1 cut(s)	1049
PpsI	GAGTC	1 cut(s)	1049
PpuMI	RGGWCCY	1 cut(s)	401
PscI	ACATGT	1 cut(s)	114
Psp5II	RGGWCCY	1 cut(s)	401
Psp6I	CCWGG	3 cut(s)	214, 274, 725
PspFI	CCCAGC	2 cut(s)	1057, 1101
PspGI	CCWGG	3 cut(s)	214, 274, 725
PspN4I	GGNNCC	3 cut(s)	402, 897, 1113
PspPI	GGNCC	3 cut(s)	401, 807, 1111
PspPPI	RGGWCCY	1 cut(s)	401
PsrI	GAACNNNNNNTAC	2 cut(s)	172, 204
PstNI	CAGNNNCTG	2 cut(s)	661, 875
PsuI	RGATCY	2 cut(s)	379, 769
PvuII	CAGCTG	1 cut(s)	800
RsaI	GTAC	1 cut(s)	109
RsaNI	GTAC	1 cut(s)	108
SalI	GTCGAC	1 cut(s)	1232
SaqAI	TTAA	3 cut(s)	297, 471, 600
SatI	GCNGC	2 cut(s)	1017, 1161
Sau3AI	GATC	5 cut(s)	379, 769, 802, 906, 1086
Sau96I	GGNCC	3 cut(s)	401, 807, 1111
SchI	GAGTC	1 cut(s)	1050
ScrFI	CCNGG	4 cut(s)	216, 276, 727, 767
SfaNI	GCATC	5 cut(s)	187, 295, 574, 627, 1096
Sfr274I	CTCGAG	1 cut(s)	479
SinI	GGWCC	3 cut(s)	401, 807, 1111
SlaI	CTCGAG	1 cut(s)	479
SmlI	CTYRAG	3 cut(s)	5, 414, 479
SmoI	CTYRAG	3 cut(s)	5, 414, 479
Sse9I	AATT	2 cut(s)	58, 840
SsiI	CCGC	4 cut(s)	1007, 1109, 1160, 1163
StyD4I	CCNGG	4 cut(s)	214, 274, 725, 765
TaaI	ACNGT	6 cut(s)	128, 179, 657, 990, 1054, 1231
TaiI	ACGT	3 cut(s)	744, 942, 1099
TaqI	TCGA	6 cut(s)	21, 171, 191, 480, 519, 1233
TaqII	GACCGA	1 cut(s)	795
TasI	AATT	2 cut(s)	58, 840
TauI	GCSGC	1 cut(s)	1163
TfiI	GAWTC	2 cut(s)	10, 954
Tru1I	TTAA	3 cut(s)	297, 471, 600
Tru9I	TTAA	3 cut(s)	297, 471, 600
TscAI	CASTG	1 cut(s)	1032
TseFI	GTSAC	1 cut(s)	622
TseI	GCWGC	1 cut(s)	1016
Tsp45I	GTSAC	1 cut(s)	622
TspDTI	ATGAA	1 cut(s)	378
TspGWI	ACGGA	3 cut(s)	468, 1034, 1112
TspRI	CASTG	1 cut(s)	1032
Van91I	CCANNNNNTGG	1 cut(s)	875
VpaK11BI	GGWCC	3 cut(s)	401, 807, 1111
XceI	RCATGY	1 cut(s)	118
XhoI	CTCGAG	1 cut(s)	479
XmiI	GTMKAC	1 cut(s)	1233

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.