MD04G1001200.v1.1

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr04
Physical Location & Seq
Forward (+)
158425 .. 163280
4856 bp
Loading structure...
UTR
Exon/CDS
Intron
MD04G1001200.v1.1.491

Sequence Viewer

Length: 1254 bp
ATGTTGGAGGGCGGCGCCAAATTCACTGGAATTATTGGTCTAAACAACCATGATAACAACTATGACGATTTGTCACAAGGATTCTACCTCAAACTCCAGGAGGGCGAAGGTACCAACATGTCCATCGACAGTATGCAAATGAGCAACGACGGAGGCTCTGTGGCCATGTCTGTAGACAACAGCAGCATTGCTTCAAATACTAATGATTCCCACACTCGAATCTTGAACCACCAAGGGCTGCGGCGACGTACTAAGGATAACTACTCTGTGCAACAGAGTGTTAATCCCCGAGGAAGAGTCACACATGCTCTAAGTCATGATCAACTGGCTCGAGCTCTATTGGACAGCCATTCCTTGACAGAGGGGCTTGAGGATTATGAGGACTGGACAATTGACTTAAGAAAGCTAAACATGGGTGAAGCTTTTGCGCAAGGTGCTTTTGGGAAGCTATACAGAGGTACCTACAATGGCGAAGATGTTGCCATCAAACTTTTGGAGCGGCCAGAAAATGACCCAGAAAGGGCTCAGGTGATGGAGCAGCAGTTTCAACAGGAAGTCAAGATGCTGGCTAATTTGAAGCATCCAAACATAGTTCGTTTCATTGGTGCTTGCCGTAAACCAATGGTTTGGTGCATTGTAACAGAGTATGCTAAGGGGGGTTCAGTTAGGCAGTTCTTGGCGAAGCGGCAGAGCCGATCGGTTCCATTGAAATTAGCAGTCAAGCAAGCTTTGGATGTCGCGAGGGGGTTTGCGTATGTTCATGGGCTTGGTCTGATTCACAGGGACTTGAAATCTGACAACCTGTTGATTTCGTCTGACAAATCTATAAAAATTGCTGATTTTGGAGTTGCCCGTATTGAGGTGCAGACAGAAGGAATGACTCCAGAGACTGGGACATACCGCTGGATGGCACCGGAGATGATCCAGCACAGGCATTACACACAGAAAGTTGACGTTTATAGCTTTGGGATAGTTCTTTGGGAACTTATAACAGGGATGCTTCCATTCCAGAACATGACAGCAGTACAGGCAGCATTTGCAGTTGTTAATAAGAGTGTCCGCCCTAACATTCCGAATGACTGCTTACCTGTTCTTTGTGAGATTATGACGAGGTGTTGGGATGCAAACCCTGATGTGAGGCCATCCTTCACTGAAGTCGTGAGAATGCTCGAGCATGCAGAGACTGAGATCATGACGACTGTTCGCAAGGCCCGGTTCAGGTGTTGCATTACCCAGCCAATGACAGCGGACTGA

Protein Analysis

418

Amino Acids

46.98

Weight (kDa)

6.65

Isoelectric Point (pI)

39.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 137 - 390 1.1e-66 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 143 - 388 3.3e-56 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 989
Acc16I TGCGCA 1 cut(s) 429
Acc65I GGTACC 2 cut(s) 110, 458
AccB1I GGYRCC 4 cut(s) 14, 110, 458, 910
AccB7I CCANNNNNTGG 1 cut(s) 890
AccBSI CCGCTC 1 cut(s) 499
AccI GTMKAC 1 cut(s) 174
AccII CGCG 1 cut(s) 740
AciI CCGC 7 cut(s) 12, 241, 499, 685, 901, 1060, 1247
AclWI GGATC 1 cut(s) 916
AcoI YGGCCR 2 cut(s) 162, 500
AcsI RAATTY 1 cut(s) 20
AcuI CTGAAG 1 cut(s) 1173
AcyI GRCGYC 1 cut(s) 15
AfaI GTAC 4 cut(s) 112, 250, 460, 1026
AfiI CCNNNNNNNGG 5 cut(s) 520, 859, 890, 907, 1218
AflII CTTAAG 1 cut(s) 397
AflIII ACRYGT 1 cut(s) 117
AgsI TTSAA 6 cut(s) 195, 226, 548, 577, 709, 790
AhdI GACNNNNNGTC 1 cut(s) 70
AjnI CCWGG 1 cut(s) 96
AluBI AGCT 6 cut(s) 335, 406, 422, 448, 728, 963
AluI AGCT 6 cut(s) 335, 406, 422, 448, 728, 963
Alw21I GWGCWC 1 cut(s) 337
Alw26I GTCTC 2 cut(s) 881, 1175
AlwI GGATC 1 cut(s) 916
AlwNI CAGNNNCTG 2 cut(s) 890, 1184
Ama87I CYCGRG 3 cut(s) 288, 330, 1169
AoxI GGCC 4 cut(s) 162, 500, 1139, 1209
ApeKI GCWGC 4 cut(s) 183, 238, 538, 1031
ApoI RAATTY 1 cut(s) 20
Asp718I GGTACC 2 cut(s) 110, 458
AspLEI GCGC 2 cut(s) 17, 430
AspS9I GGNCC 1 cut(s) 1210
AsuC2I CCSGG 1 cut(s) 1213
AsuHPI GGTGA 2 cut(s) 428, 541
AvaI CYCGRG 3 cut(s) 288, 330, 1169
BaeI ACNNNNGTAYC 2 cut(s) 442, 475
BalI TGGCCA 1 cut(s) 164
BanI GGYRCC 4 cut(s) 14, 110, 458, 910
BanII GRGCYC 2 cut(s) 337, 526
Bbv12I GWGCWC 1 cut(s) 337
BbvI GCAGC 4 cut(s) 195, 225, 550, 1043
BccI CCATC 5 cut(s) 131, 491, 526, 901, 1150
BceAI ACGGC 1 cut(s) 597
BcgI CGANNNNNNTGC 2 cut(s) 461, 495
BciT130I CCWGG 1 cut(s) 98
BclI TGATCA 1 cut(s) 319
BcnI CCSGG 1 cut(s) 1213
BcoDI GTCTC 2 cut(s) 881, 1175
BfmI CTRYAG 1 cut(s) 171
BfoI RGCGCY 1 cut(s) 18
BfrI CTTAAG 1 cut(s) 397
BisI GCNGC 8 cut(s) 13, 184, 239, 242, 500, 539, 686, 1032
BlsI GCNGC 8 cut(s) 14, 185, 240, 243, 501, 540, 687, 1033
Bme1390I CCNGG 2 cut(s) 98, 1213
BmeRI GACNNNNNGTC 1 cut(s) 70
BmeT110I CYCGRG 3 cut(s) 288, 330, 1169
BmgT120I GGNCC 1 cut(s) 1210
BmiI GGNNCC 5 cut(s) 16, 112, 460, 702, 912
BmrFI CCNGG 2 cut(s) 98, 1213
BmrI ACTGGG 1 cut(s) 900
BmsI GCATC 4 cut(s) 552, 589, 987, 1111
BmuI ACTGGG 1 cut(s) 900
BpmI CTGGAG 2 cut(s) 80, 867
Bpu10I CCTNAGC 2 cut(s) 525, 651
BpuEI CTTGAG 1 cut(s) 389
BpuMI CCSGG 1 cut(s) 1213
BsaHI GRCGYC 1 cut(s) 15
BsaJI CCNNGG 2 cut(s) 232, 289
BsaWI WCCGGW 1 cut(s) 913
BsaXI ACNNNNNCTCC 4 cut(s) 144, 174, 527, 557
Bsc4I CCNNNNNNNGG 5 cut(s) 520, 859, 890, 907, 1218
Bse1I ACTGG 4 cut(s) 31, 330, 389, 895
Bse3DI GCAATG 1 cut(s) 186
BseBI CCWGG 1 cut(s) 98
BseDI CCNNGG 2 cut(s) 232, 289
BseGI GGATG 6 cut(s) 580, 739, 912, 1002, 1126, 1142
BseLI CCNNNNNNNGG 5 cut(s) 520, 859, 890, 907, 1218
BseMI GCAATG 1 cut(s) 186
BseMII CTCAG 2 cut(s) 539, 1176
BseNI ACTGG 4 cut(s) 31, 330, 389, 895
BseXI GCAGC 4 cut(s) 195, 225, 550, 1043
BseYI CCCAGC 1 cut(s) 1233
BsgI GTGCAG 1 cut(s) 884
Bsh1236I CGCG 1 cut(s) 740
Bsh1285I CGRYCG 1 cut(s) 698
BshFI GGCC 4 cut(s) 164, 502, 1141, 1211
BshNI GGYRCC 4 cut(s) 14, 110, 458, 910
BsiEI CGRYCG 1 cut(s) 698
BsiHKAI GWGCWC 1 cut(s) 337
BsiHKCI CYCGRG 3 cut(s) 288, 330, 1169
BsiSI CCGG 2 cut(s) 914, 1213
BslFI GGGAC 2 cut(s) 797, 907
BslI CCNNNNNNNGG 5 cut(s) 520, 859, 890, 907, 1218
BsmAI GTCTC 2 cut(s) 881, 1175
BsmFI GGGAC 2 cut(s) 797, 907
BsmI GAATGC 1 cut(s) 1170
BsnI GGCC 4 cut(s) 164, 502, 1141, 1211
BsoBI CYCGRG 3 cut(s) 288, 330, 1169
Bsp1286I GDGCHC 2 cut(s) 337, 526
Bsp143I GATC 4 cut(s) 319, 695, 921, 1188
Bsp68I TCGCGA 1 cut(s) 740
BspACI CCGC 7 cut(s) 12, 241, 499, 685, 901, 1060, 1247
BspANI GGCC 4 cut(s) 164, 502, 1141, 1211
BspCNI CTCAG 2 cut(s) 538, 1177
BspFNI CGCG 1 cut(s) 740
BspHI TCATGA 2 cut(s) 316, 1191
BspLI GGNNCC 5 cut(s) 16, 112, 460, 702, 912
BspPI GGATC 1 cut(s) 916
BspT107I GGYRCC 4 cut(s) 14, 110, 458, 910
BspTI CTTAAG 1 cut(s) 397
BsrBI CCGCTC 1 cut(s) 499
BsrDI GCAATG 1 cut(s) 186
BsrI ACTGG 4 cut(s) 31, 330, 389, 895
BssECI CCNNGG 2 cut(s) 232, 289
BssMI GATC 4 cut(s) 319, 695, 921, 1188
BssNI GRCGYC 1 cut(s) 15
BssT1I CCWWGG 1 cut(s) 232
Bst2UI CCWGG 1 cut(s) 98
Bst4CI ACNGT 2 cut(s) 131, 1201
Bst6I CTCTTC 1 cut(s) 289
BstACI GRCGYC 1 cut(s) 15
BstAFI CTTAAG 1 cut(s) 397
BstAPI GCANNNNNTGC 1 cut(s) 1037
BstC8I GCNNGC 4 cut(s) 567, 610, 726, 1176
BstDEI CTNAG 5 cut(s) 252, 311, 525, 651, 1185
BstF5I GGATG 6 cut(s) 580, 739, 912, 1002, 1126, 1142
BstFNI CGCG 1 cut(s) 740
BstH2I RGCGCY 1 cut(s) 18
BstHHI GCGC 2 cut(s) 17, 430
BstKTI GATC 4 cut(s) 322, 698, 924, 1191
BstMAI GTCTC 2 cut(s) 881, 1175
BstMBI GATC 4 cut(s) 319, 695, 921, 1188
BstMCI CGRYCG 1 cut(s) 698
BstMWI GCNNNNNNNGC 3 cut(s) 434, 1028, 1037
BstNI CCWGG 1 cut(s) 98
BstNSI RCATGY 3 cut(s) 121, 308, 1178
BstSCI CCNGG 2 cut(s) 96, 1211
BstSFI CTRYAG 1 cut(s) 171
BstUI CGCG 1 cut(s) 740
BstV1I GCAGC 4 cut(s) 195, 225, 550, 1043
BstXI CCANNNNNNTGG 1 cut(s) 627
BsuRI GGCC 4 cut(s) 164, 502, 1141, 1211
BtsCI GGATG 6 cut(s) 580, 739, 912, 1002, 1126, 1142
BtsIMutI CAGTG 2 cut(s) 24, 1149
BtuMI TCGCGA 1 cut(s) 740
Cac8I GCNNGC 4 cut(s) 567, 610, 726, 1176
CaiI CAGNNNCTG 2 cut(s) 890, 1184
CciI TCATGA 2 cut(s) 316, 1191
CfoI GCGC 2 cut(s) 17, 430
Cfr13I GGNCC 1 cut(s) 1210
Csp6I GTAC 4 cut(s) 111, 249, 459, 1025
CviQI GTAC 4 cut(s) 111, 249, 459, 1025
DdeI CTNAG 5 cut(s) 252, 311, 525, 651, 1185
DinI GGCGCC 1 cut(s) 16
DpnI GATC 4 cut(s) 321, 697, 923, 1190
DpnII GATC 4 cut(s) 319, 695, 921, 1188
DriI GACNNNNNGTC 1 cut(s) 70
EaeI YGGCCR 2 cut(s) 162, 500
Eam1104I CTCTTC 1 cut(s) 289
Eam1105I GACNNNNNGTC 1 cut(s) 70
EarI CTCTTC 1 cut(s) 289
EciI GGCGGA 1 cut(s) 1049
Ecl136II GAGCTC 1 cut(s) 335
Eco130I CCWWGG 1 cut(s) 232
Eco24I GRGCYC 2 cut(s) 337, 526
Eco53kI GAGCTC 1 cut(s) 335
Eco57I CTGAAG 1 cut(s) 1173
Eco88I CYCGRG 3 cut(s) 288, 330, 1169
EcoICRI GAGCTC 1 cut(s) 335
EcoRII CCWGG 1 cut(s) 96
EcoT14I CCWWGG 1 cut(s) 232
EcoT38I GRGCYC 2 cut(s) 337, 526
EgeI GGCGCC 1 cut(s) 16
EheI GGCGCC 1 cut(s) 16
ErhI CCWWGG 1 cut(s) 232
FaqI GGGAC 2 cut(s) 797, 907
FbaI TGATCA 1 cut(s) 319
FblI GTMKAC 1 cut(s) 174
Fnu4HI GCNGC 8 cut(s) 13, 184, 239, 242, 500, 539, 686, 1032
FokI GGATG 6 cut(s) 567, 746, 919, 1009, 1129, 1133
FriOI GRGCYC 2 cut(s) 337, 526
Fsp4HI GCNGC 8 cut(s) 13, 184, 239, 242, 500, 539, 686, 1032
FspI TGCGCA 1 cut(s) 429
GlaI GCGC 2 cut(s) 16, 429
GluI GCNGC 8 cut(s) 13, 184, 239, 242, 500, 539, 686, 1032
GsaI CCCAGC 1 cut(s) 1237
GsuI CTGGAG 2 cut(s) 80, 867
HaeII RGCGCY 1 cut(s) 18
HaeIII GGCC 4 cut(s) 164, 502, 1141, 1211
HapII CCGG 2 cut(s) 914, 1213
HhaI GCGC 2 cut(s) 17, 430
Hin1I GRCGYC 1 cut(s) 15
Hin6I GCGC 2 cut(s) 15, 428
HinP1I GCGC 2 cut(s) 15, 428
HincII GTYRAC 1 cut(s) 952
HindII GTYRAC 1 cut(s) 952
HindIII AAGCTT 2 cut(s) 420, 726
HinfI GANTC 6 cut(s) 81, 206, 219, 297, 775, 880
HpaII CCGG 2 cut(s) 914, 1213
HphI GGTGA 2 cut(s) 428, 541
Hpy166II GTNNAC 3 cut(s) 175, 617, 952
Hpy188I TCNGA 4 cut(s) 774, 796, 817, 1074
Hpy188III TCNNGA 8 cut(s) 223, 317, 559, 739, 884, 1009, 1159, 1192
Hpy8I GTNNAC 3 cut(s) 175, 617, 952
Hpy99I CGWCG 2 cut(s) 152, 249
HpyAV CCTTC 3 cut(s) 101, 866, 1156
HpyCH4III ACNGT 2 cut(s) 131, 1201
HpyCH4IV ACGT 2 cut(s) 247, 954
HpyCH4V TGCA 8 cut(s) 136, 271, 633, 865, 1040, 1124, 1178, 1227
HpyF10VI GCNNNNNNNGC 3 cut(s) 434, 1028, 1037
HpyF3I CTNAG 5 cut(s) 252, 311, 525, 651, 1185
HpySE526I ACGT 2 cut(s) 247, 954
Hsp92I GRCGYC 1 cut(s) 15
HspAI GCGC 2 cut(s) 15, 428
KasI GGCGCC 1 cut(s) 14
KpnI GGTACC 2 cut(s) 114, 462
Ksp22I TGATCA 1 cut(s) 319
Kzo9I GATC 4 cut(s) 319, 695, 921, 1188
LmnI GCTCC 2 cut(s) 496, 535
Lsp1109I GCAGC 4 cut(s) 195, 225, 550, 1043
LweI GCATC 4 cut(s) 552, 589, 987, 1111
MaeII ACGT 2 cut(s) 247, 954
MaeIII GTNAC 3 cut(s) 72, 298, 637
MalI GATC 4 cut(s) 321, 697, 923, 1190
MbiI CCGCTC 1 cut(s) 499
MboI GATC 4 cut(s) 319, 695, 921, 1188
MboII GAAGA 2 cut(s) 306, 485
MfeI CAATTG 1 cut(s) 390
MhlI GDGCHC 2 cut(s) 337, 526
MlsI TGGCCA 1 cut(s) 164
MluCI AATT 6 cut(s) 20, 30, 390, 571, 710, 831
MluNI TGGCCA 1 cut(s) 164
Mly113I GGCGCC 1 cut(s) 15
MlyI GAGTC 2 cut(s) 306, 874
Mox20I TGGCCA 1 cut(s) 164
MscI TGGCCA 1 cut(s) 164
MseI TTAA 3 cut(s) 282, 398, 1047
Msp20I TGGCCA 1 cut(s) 164
MspA1I CMGCKG 2 cut(s) 903, 1247
MspCI CTTAAG 1 cut(s) 397
MspI CCGG 2 cut(s) 914, 1213
MspR9I CCNGG 2 cut(s) 98, 1213
MunI CAATTG 1 cut(s) 390
Mva1269I GAATGC 1 cut(s) 1170
MvaI CCWGG 1 cut(s) 98
MvnI CGCG 1 cut(s) 740
MwoI GCNNNNNNNGC 3 cut(s) 434, 1028, 1037
NarI GGCGCC 1 cut(s) 15
NciI CCSGG 1 cut(s) 1213
NdeII GATC 4 cut(s) 319, 695, 921, 1188
NlaIV GGNNCC 5 cut(s) 16, 112, 460, 702, 912
NmuCI GTSAC 2 cut(s) 72, 298
NruI TCGCGA 1 cut(s) 740
NsbI TGCGCA 1 cut(s) 429
NspI RCATGY 3 cut(s) 121, 308, 1178
PaeI GCATGC 1 cut(s) 1178
PaeR7I CTCGAG 2 cut(s) 330, 1169
PagI TCATGA 2 cut(s) 316, 1191
PciI ACATGT 1 cut(s) 117
PctI GAATGC 1 cut(s) 1170
PfeI GAWTC 4 cut(s) 81, 206, 219, 775
PflMI CCANNNNNTGG 1 cut(s) 890
PfoI TCCNGGA 1 cut(s) 96
PkrI GCNGC 8 cut(s) 14, 185, 240, 243, 501, 540, 687, 1033
Ple19I CGATCG 1 cut(s) 698
PleI GAGTC 2 cut(s) 305, 874
PluTI GGCGCC 1 cut(s) 18
PpsI GAGTC 2 cut(s) 305, 874
PscI ACATGT 1 cut(s) 117
PsiI TTATAA 1 cut(s) 989
Psp124BI GAGCTC 1 cut(s) 337
Psp6I CCWGG 1 cut(s) 96
PspFI CCCAGC 1 cut(s) 1233
PspGI CCWGG 1 cut(s) 96
PspN4I GGNNCC 5 cut(s) 16, 112, 460, 702, 912
PspPI GGNCC 1 cut(s) 1210
PspXI VCTCGAGB 2 cut(s) 330, 1169
PstNI CAGNNNCTG 2 cut(s) 890, 1184
PvuI CGATCG 1 cut(s) 698
RruI TCGCGA 1 cut(s) 740
RsaI GTAC 4 cut(s) 112, 250, 460, 1026
RsaNI GTAC 4 cut(s) 111, 249, 459, 1025
SacI GAGCTC 1 cut(s) 337
SaqAI TTAA 3 cut(s) 282, 398, 1047
SatI GCNGC 8 cut(s) 13, 184, 239, 242, 500, 539, 686, 1032
Sau3AI GATC 4 cut(s) 319, 695, 921, 1188
Sau96I GGNCC 1 cut(s) 1210
SchI GAGTC 2 cut(s) 306, 874
ScrFI CCNGG 2 cut(s) 98, 1213
SduI GDGCHC 2 cut(s) 337, 526
SfaNI GCATC 4 cut(s) 552, 589, 987, 1111
SfcI CTRYAG 1 cut(s) 171
SfoI GGCGCC 1 cut(s) 16
Sfr274I CTCGAG 2 cut(s) 330, 1169
SlaI CTCGAG 2 cut(s) 330, 1169
SmlI CTYRAG 4 cut(s) 330, 368, 397, 1169
SmoI CTYRAG 4 cut(s) 330, 368, 397, 1169
SphI GCATGC 1 cut(s) 1178
Sse9I AATT 6 cut(s) 20, 30, 390, 571, 710, 831
SsiI CCGC 7 cut(s) 12, 241, 499, 685, 901, 1060, 1247
SspDI GGCGCC 1 cut(s) 14
SstI GAGCTC 1 cut(s) 337
StyD4I CCNGG 2 cut(s) 96, 1211
StyI CCWWGG 1 cut(s) 232
TaaI ACNGT 2 cut(s) 131, 1201
TaiI ACGT 2 cut(s) 250, 957
TaqI TCGA 4 cut(s) 126, 217, 331, 1170
TasI AATT 6 cut(s) 20, 30, 390, 571, 710, 831
TatI WGTACW 1 cut(s) 1024
TauI GCSGC 4 cut(s) 15, 244, 502, 688
TfiI GAWTC 4 cut(s) 81, 206, 219, 775
Tru1I TTAA 3 cut(s) 282, 398, 1047
Tru9I TTAA 3 cut(s) 282, 398, 1047
TscAI CASTG 2 cut(s) 31, 1156
TseFI GTSAC 2 cut(s) 72, 298
TseI GCWGC 4 cut(s) 183, 238, 538, 1031
Tsp45I GTSAC 2 cut(s) 72, 298
TspDTI ATGAA 2 cut(s) 589, 749
TspGWI ACGGA 1 cut(s) 165
TspRI CASTG 2 cut(s) 31, 1156
Van91I CCANNNNNTGG 1 cut(s) 890
Vha464I CTTAAG 1 cut(s) 397
XapI RAATTY 1 cut(s) 20
XceI RCATGY 3 cut(s) 121, 308, 1178
XcmI CCANNNNNNNNNTGG 1 cut(s) 490
XhoI CTCGAG 2 cut(s) 330, 1169
XmiI GTMKAC 1 cut(s) 174
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.