Rmu_sc0003412.1_g000004

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003412.1
Physical Location & Seq
Reverse (-)
10262 .. 16408
6147 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003412.1_g000004.1.cds

Sequence Viewer

Length: 1419 bp
atgaaggattacaccgaagactttcccaggtcgtgtgttgcggtttccattcgatctctgagcagtcgtcgattgaggtttttgagagagaaagggggtgttggtttcagaaaactatatgctgagcaattagggcaacctggaaggttctgtttttttttgttggagaaggaaatgttggaaggtggtgccaagttccctggaattataggtctaaacaacaacgattatgatttgtctcaaggcttttaccacaaacttcatgagggtgagggtactaacatgtccactgacagtatgcaaactagcgttgatggaggctctgtcgccatgtctataggtaacagcagcgttgcttcaaataccaatgattcccacactcgcatcttgaaccaccaaggcctgcggcgacgcagaaatgacaacgactctgttgctgcacaaagtgttcatcgcggaagagtcacacatgcactcagtgatgatcaacttgcccgagctctaatggacagcaattctgtcacagaggggcttgagaattatgaggcatggacaattgacttaagaaagctaaacatgggtgaagcttttgcgcaaggtgcttttgggaagctatatagaggtacttacaatggcgaggatgttgctatcaaaattttggagaggcctgagaatgacccagaaaaggctcagataatggagcaacagtttcaacaggaagtcaagatgttggctacgttgaagcatccgaacatagttcgttttatcggtggctgccgtaaaccaatggtttggtgcattgtaacagaatatgctaagggtggttcagtacggcaattcttgatcaagaggcagagccgatcagttccgttgaagttagcagtcaagcaagctttggatgttgcaagggggatggcatatgttcatgggctcgggctgattcacagggacttgaaatcggacaaccttttgattttttcagacaaatcaattaaaattgctgattttggggttgcccgtattgaggtgcagacggaaggaatgaccccagagactgggacataccgctggatggctccggagatgatccagcataggccgtacactcagaaagttgatgtttatagctttgggattgttctttgggaacttatcacagggatgcttccgttctcgaacatgacagcagtgcaggcagcgtttgcagttgtcaataagggtgtccgtcctatcattccccctgactgcttaactgttcttggtgagataatgacgaggtgctgggatgccaaccctgatgccagaccacccttcactgaggtggtaagaatgctcgagattgcagagacagagatcatgaccactgtccggaaggctcgtttcaggtgttgcatcacccaaccaatgacaaccgactga

Protein Analysis

472

Amino Acids

53.03

Weight (kDa)

8.66

Isoelectric Point (pI)

41.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 594
AccB1I GGYRCC 1 cut(s) 188
AccB7I CCANNNNNTGG 1 cut(s) 1055
AccII CGCG 1 cut(s) 456
AccIII TCCGGA 2 cut(s) 1078, 1368
AciI CCGC 4 cut(s) 41, 406, 456, 1066
AclWI GGATC 1 cut(s) 1081
AcsI RAATTY 1 cut(s) 654
AdeI CACNNNGTG 2 cut(s) 446, 479
AfaI GTAC 4 cut(s) 277, 625, 831, 1103
AfiI CCNNNNNNNGG 5 cut(s) 685, 1024, 1055, 1072, 1368
AflII CTTAAG 1 cut(s) 562
AflIII ACRYGT 1 cut(s) 282
AgsI TTSAA 6 cut(s) 360, 391, 713, 742, 874, 955
AjnI CCWGG 3 cut(s) 26, 139, 199
AjuI GAANNNNNNNTTGG 2 cut(s) 161, 193
AleI CACNNNNGTG 1 cut(s) 1319
AluBI AGCT 6 cut(s) 500, 571, 587, 613, 893, 1128
AluI AGCT 6 cut(s) 500, 571, 587, 613, 893, 1128
Alw21I GWGCWC 1 cut(s) 502
Alw26I GTCTC 3 cut(s) 243, 1046, 1340
AlwI GGATC 1 cut(s) 1081
AlwNI CAGNNNCTG 1 cut(s) 1055
Ama87I CYCGRG 3 cut(s) 495, 932, 1334
Aor13HI TCCGGA 2 cut(s) 1078, 1368
AoxI GGCC 3 cut(s) 400, 665, 1097
ApeKI GCWGC 4 cut(s) 348, 437, 774, 1196
ApoI RAATTY 1 cut(s) 654
Asp700I GAANNNNTTC 1 cut(s) 21
AspLEI GCGC 1 cut(s) 595
AsuHPI GGTGA 4 cut(s) 281, 593, 1274, 1387
AvaI CYCGRG 3 cut(s) 495, 932, 1334
BanI GGYRCC 1 cut(s) 188
BanII GRGCYC 2 cut(s) 502, 933
BbsI GAAGAC 1 cut(s) 24
Bbv12I GWGCWC 1 cut(s) 502
BbvI GCAGC 4 cut(s) 360, 424, 761, 1208
BccI CCATC 3 cut(s) 308, 907, 1066
BceAI ACGGC 3 cut(s) 762, 848, 1084
BcgI CGANNNNNNTGC 4 cut(s) 416, 450, 626, 660
BciT130I CCWGG 3 cut(s) 28, 141, 201
BclI TGATCA 2 cut(s) 484, 843
BcoDI GTCTC 3 cut(s) 243, 1046, 1340
BfaI CTAG 1 cut(s) 306
BfmI CTRYAG 1 cut(s) 336
BfrI CTTAAG 1 cut(s) 562
BisI GCNGC 5 cut(s) 349, 407, 438, 775, 1197
BlpI GCTNAGC 1 cut(s) 123
BlsI GCNGC 5 cut(s) 350, 408, 439, 776, 1198
Bme1390I CCNGG 3 cut(s) 28, 141, 201
BmeT110I CYCGRG 3 cut(s) 495, 932, 1334
BmiI GGNNCC 2 cut(s) 190, 1077
BmrFI CCNGG 3 cut(s) 28, 141, 201
BmrI ACTGGG 1 cut(s) 1065
BmsI GCATC 6 cut(s) 393, 754, 1152, 1276, 1288, 1401
BmuI ACTGGG 1 cut(s) 1065
BoxI GACNNNNGTC 1 cut(s) 1364
BpiI GAAGAC 1 cut(s) 24
Bpu10I CCTNAGC 1 cut(s) 816
Bpu1102I GCTNAGC 1 cut(s) 123
BpuEI CTTGAG 2 cut(s) 225, 554
BsaJI CCNNGG 3 cut(s) 26, 199, 397
BsaWI WCCGGW 2 cut(s) 1078, 1368
BsaXI ACNNNNNCTCC 4 cut(s) 309, 339, 692, 722
Bsc4I CCNNNNNNNGG 5 cut(s) 685, 1024, 1055, 1072, 1368
Bse1I ACTGG 1 cut(s) 1060
BseAI TCCGGA 2 cut(s) 1078, 1368
BseBI CCWGG 3 cut(s) 28, 141, 201
BseDI CCNNGG 3 cut(s) 26, 199, 397
BseGI GGATG 7 cut(s) 646, 745, 904, 918, 1077, 1167, 1291
BseLI CCNNNNNNNGG 5 cut(s) 685, 1024, 1055, 1072, 1368
BseMII CTCAG 7 cut(s) 50, 114, 490, 660, 704, 1121, 1308
BseNI ACTGG 1 cut(s) 1060
BseXI GCAGC 4 cut(s) 360, 424, 761, 1208
BseYI CCCAGC 1 cut(s) 1281
BsgI GTGCAG 3 cut(s) 423, 1049, 1211
Bsh1236I CGCG 1 cut(s) 456
BshFI GGCC 3 cut(s) 402, 667, 1099
BshNI GGYRCC 1 cut(s) 188
BsiHKAI GWGCWC 1 cut(s) 502
BsiHKCI CYCGRG 3 cut(s) 495, 932, 1334
BsiSI CCGG 2 cut(s) 1079, 1369
BslFI GGGAC 2 cut(s) 962, 1072
BslI CCNNNNNNNGG 5 cut(s) 685, 1024, 1055, 1072, 1368
BsmAI GTCTC 3 cut(s) 243, 1046, 1340
BsmFI GGGAC 2 cut(s) 962, 1072
BsmI GAATGC 1 cut(s) 1335
BsnI GGCC 3 cut(s) 402, 667, 1099
BsoBI CYCGRG 3 cut(s) 495, 932, 1334
Bsp1286I GDGCHC 2 cut(s) 502, 933
Bsp13I TCCGGA 2 cut(s) 1078, 1368
Bsp143I GATC 6 cut(s) 53, 484, 843, 860, 1086, 1353
Bsp1720I GCTNAGC 1 cut(s) 123
BspACI CCGC 4 cut(s) 41, 406, 456, 1066
BspANI GGCC 3 cut(s) 402, 667, 1099
BspCNI CTCAG 7 cut(s) 51, 115, 489, 661, 703, 1120, 1309
BspEI TCCGGA 2 cut(s) 1078, 1368
BspFNI CGCG 1 cut(s) 456
BspHI TCATGA 2 cut(s) 262, 1356
BspLI GGNNCC 2 cut(s) 190, 1077
BspPI GGATC 1 cut(s) 1081
BspT107I GGYRCC 1 cut(s) 188
BspTI CTTAAG 1 cut(s) 562
BsrI ACTGG 1 cut(s) 1060
BssECI CCNNGG 3 cut(s) 26, 199, 397
BssMI GATC 6 cut(s) 53, 484, 843, 860, 1086, 1353
BssT1I CCWWGG 1 cut(s) 397
Bst2UI CCWGG 3 cut(s) 28, 141, 201
Bst4CI ACNGT 4 cut(s) 296, 708, 1255, 1366
Bst6I CTCTTC 1 cut(s) 454
BstAFI CTTAAG 1 cut(s) 562
BstAPI GCANNNNNTGC 1 cut(s) 1202
BstC8I GCNNGC 3 cut(s) 404, 891, 1194
BstDEI CTNAG 8 cut(s) 59, 123, 476, 669, 690, 816, 1107, 1317
BstF5I GGATG 7 cut(s) 646, 745, 904, 918, 1077, 1167, 1291
BstFNI CGCG 1 cut(s) 456
BstHHI GCGC 1 cut(s) 595
BstKTI GATC 6 cut(s) 56, 487, 846, 863, 1089, 1356
BstMAI GTCTC 3 cut(s) 243, 1046, 1340
BstMBI GATC 6 cut(s) 53, 484, 843, 860, 1086, 1353
BstMWI GCNNNNNNNGC 4 cut(s) 133, 599, 1193, 1202
BstNI CCWGG 3 cut(s) 28, 141, 201
BstNSI RCATGY 2 cut(s) 286, 473
BstPAI GACNNNNGTC 1 cut(s) 1364
BstSCI CCNGG 3 cut(s) 26, 139, 199
BstSFI CTRYAG 1 cut(s) 336
BstUI CGCG 1 cut(s) 456
BstV1I GCAGC 4 cut(s) 360, 424, 761, 1208
BstV2I GAAGAC 1 cut(s) 24
BstXI CCANNNNNNTGG 1 cut(s) 792
BsuRI GGCC 3 cut(s) 402, 667, 1099
BtgZI GCGATG 1 cut(s) 437
BtsCI GGATG 7 cut(s) 646, 745, 904, 918, 1077, 1167, 1291
BtsI GCAGTG 1 cut(s) 1194
BtsIMutI CAGTG 5 cut(s) 288, 484, 1194, 1314, 1362
Cac8I GCNNGC 3 cut(s) 404, 891, 1194
CaiI CAGNNNCTG 1 cut(s) 1055
CciI TCATGA 2 cut(s) 262, 1356
CfoI GCGC 1 cut(s) 595
CseI GACGC 1 cut(s) 420
Csp6I GTAC 4 cut(s) 276, 624, 830, 1102
CviAII CATG 9 cut(s) 263, 283, 331, 470, 549, 577, 926, 1180, 1357
CviQI GTAC 4 cut(s) 276, 624, 830, 1102
DdeI CTNAG 8 cut(s) 59, 123, 476, 669, 690, 816, 1107, 1317
DpnI GATC 6 cut(s) 55, 486, 845, 862, 1088, 1355
DpnII GATC 6 cut(s) 53, 484, 843, 860, 1086, 1353
DraIII CACNNNGTG 2 cut(s) 446, 479
Eam1104I CTCTTC 1 cut(s) 454
EarI CTCTTC 1 cut(s) 454
Ecl136II GAGCTC 1 cut(s) 500
Eco130I CCWWGG 1 cut(s) 397
Eco147I AGGCCT 2 cut(s) 402, 667
Eco24I GRGCYC 2 cut(s) 502, 933
Eco53kI GAGCTC 1 cut(s) 500
Eco88I CYCGRG 3 cut(s) 495, 932, 1334
EcoICRI GAGCTC 1 cut(s) 500
EcoRII CCWGG 3 cut(s) 26, 139, 199
EcoT14I CCWWGG 1 cut(s) 397
EcoT38I GRGCYC 2 cut(s) 502, 933
ErhI CCWWGG 1 cut(s) 397
FaeI CATG 9 cut(s) 266, 286, 334, 473, 552, 580, 929, 1183, 1360
FaqI GGGAC 2 cut(s) 962, 1072
FatI CATG 9 cut(s) 262, 282, 330, 469, 548, 576, 925, 1179, 1356
FauNDI CATATG 1 cut(s) 919
FbaI TGATCA 2 cut(s) 484, 843
Fnu4HI GCNGC 5 cut(s) 349, 407, 438, 775, 1197
FokI GGATG 7 cut(s) 653, 732, 911, 925, 1084, 1174, 1298
FriOI GRGCYC 2 cut(s) 502, 933
Fsp4HI GCNGC 5 cut(s) 349, 407, 438, 775, 1197
FspBI CTAG 1 cut(s) 306
FspI TGCGCA 1 cut(s) 594
GlaI GCGC 1 cut(s) 594
GluI GCNGC 5 cut(s) 349, 407, 438, 775, 1197
GsaI CCCAGC 1 cut(s) 1285
HaeIII GGCC 3 cut(s) 402, 667, 1099
HapII CCGG 2 cut(s) 1079, 1369
HgaI GACGC 1 cut(s) 420
HhaI GCGC 1 cut(s) 595
Hin1II CATG 9 cut(s) 266, 286, 334, 473, 552, 580, 929, 1183, 1360
Hin6I GCGC 1 cut(s) 593
HinP1I GCGC 1 cut(s) 593
HindIII AAGCTT 2 cut(s) 585, 891
HinfI GANTC 4 cut(s) 371, 428, 462, 940
HpaII CCGG 2 cut(s) 1079, 1369
HphI GGTGA 4 cut(s) 281, 593, 1274, 1387
Hpy166II GTNNAC 3 cut(s) 288, 782, 1104
Hpy188I TCNGA 7 cut(s) 60, 110, 693, 750, 961, 982, 1110
Hpy8I GTNNAC 3 cut(s) 288, 782, 1104
Hpy99I CGWCG 2 cut(s) 72, 414
HpyAV CCTTC 6 cut(s) 138, 163, 176, 1031, 1321, 1366
HpyCH4III ACNGT 4 cut(s) 296, 708, 1255, 1366
HpyCH4IV ACGT 1 cut(s) 737
HpyF10VI GCNNNNNNNGC 4 cut(s) 133, 599, 1193, 1202
HpyF3I CTNAG 8 cut(s) 59, 123, 476, 669, 690, 816, 1107, 1317
HpySE526I ACGT 1 cut(s) 737
Hsp92II CATG 9 cut(s) 266, 286, 334, 473, 552, 580, 929, 1183, 1360
HspAI GCGC 1 cut(s) 593
Kpn2I TCCGGA 2 cut(s) 1078, 1368
Ksp22I TGATCA 2 cut(s) 484, 843
Kzo9I GATC 6 cut(s) 53, 484, 843, 860, 1086, 1353
LmnI GCTCC 2 cut(s) 700, 1081
Lsp1109I GCAGC 4 cut(s) 360, 424, 761, 1208
LweI GCATC 6 cut(s) 393, 754, 1152, 1276, 1288, 1401
MaeI CTAG 1 cut(s) 306
MaeII ACGT 1 cut(s) 737
MaeIII GTNAC 4 cut(s) 341, 463, 520, 802
MalI GATC 6 cut(s) 55, 486, 845, 862, 1088, 1355
MboI GATC 6 cut(s) 53, 484, 843, 860, 1086, 1353
MboII GAAGA 2 cut(s) 29, 471
MfeI CAATTG 1 cut(s) 555
MhlI GDGCHC 2 cut(s) 502, 933
MluCI AATT 9 cut(s) 128, 204, 514, 538, 555, 654, 836, 990, 996
MlyI GAGTC 2 cut(s) 422, 471
MmeI TCCRAC 2 cut(s) 144, 159
MroI TCCGGA 2 cut(s) 1078, 1368
MroXI GAANNNNTTC 1 cut(s) 21
MseI TTAA 3 cut(s) 563, 993, 1250
MslI CAYNNNNRTG 3 cut(s) 267, 1160, 1319
MspA1I CMGCKG 1 cut(s) 1068
MspCI CTTAAG 1 cut(s) 562
MspI CCGG 2 cut(s) 1079, 1369
MspR9I CCNGG 3 cut(s) 28, 141, 201
MunI CAATTG 1 cut(s) 555
Mva1269I GAATGC 1 cut(s) 1335
MvaI CCWGG 3 cut(s) 28, 141, 201
MvnI CGCG 1 cut(s) 456
MwoI GCNNNNNNNGC 4 cut(s) 133, 599, 1193, 1202
NdeI CATATG 1 cut(s) 919
NdeII GATC 6 cut(s) 53, 484, 843, 860, 1086, 1353
NlaIII CATG 9 cut(s) 266, 286, 334, 473, 552, 580, 929, 1183, 1360
NlaIV GGNNCC 2 cut(s) 190, 1077
NmuCI GTSAC 2 cut(s) 463, 520
NsbI TGCGCA 1 cut(s) 594
NspI RCATGY 2 cut(s) 286, 473
OliI CACNNNNGTG 1 cut(s) 1319
PaeR7I CTCGAG 1 cut(s) 1334
PagI TCATGA 2 cut(s) 262, 1356
PceI AGGCCT 2 cut(s) 402, 667
PciI ACATGT 1 cut(s) 282
PctI GAATGC 1 cut(s) 1335
PdmI GAANNNNTTC 1 cut(s) 21
PfeI GAWTC 2 cut(s) 371, 940
PflMI CCANNNNNTGG 1 cut(s) 1055
PkrI GCNGC 5 cut(s) 350, 408, 439, 776, 1198
PleI GAGTC 2 cut(s) 422, 470
PpsI GAGTC 2 cut(s) 422, 470
PscI ACATGT 1 cut(s) 282
PshAI GACNNNNGTC 1 cut(s) 1364
Psp124BI GAGCTC 1 cut(s) 502
Psp6I CCWGG 3 cut(s) 26, 139, 199
PspFI CCCAGC 1 cut(s) 1281
PspGI CCWGG 3 cut(s) 26, 139, 199
PspN4I GGNNCC 2 cut(s) 190, 1077
PstNI CAGNNNCTG 1 cut(s) 1055
RsaI GTAC 4 cut(s) 277, 625, 831, 1103
RsaNI GTAC 4 cut(s) 276, 624, 830, 1102
RseI CAYNNNNRTG 3 cut(s) 267, 1160, 1319
SacI GAGCTC 1 cut(s) 502
SaqAI TTAA 3 cut(s) 563, 993, 1250
SatI GCNGC 5 cut(s) 349, 407, 438, 775, 1197
Sau3AI GATC 6 cut(s) 53, 484, 843, 860, 1086, 1353
SchI GAGTC 2 cut(s) 422, 471
ScrFI CCNGG 3 cut(s) 28, 141, 201
SduI GDGCHC 2 cut(s) 502, 933
SfaNI GCATC 6 cut(s) 393, 754, 1152, 1276, 1288, 1401
SfcI CTRYAG 1 cut(s) 336
Sfr274I CTCGAG 1 cut(s) 1334
SlaI CTCGAG 1 cut(s) 1334
SmiMI CAYNNNNRTG 3 cut(s) 267, 1160, 1319
SmlI CTYRAG 4 cut(s) 240, 533, 562, 1334
SmoI CTYRAG 4 cut(s) 240, 533, 562, 1334
Sse9I AATT 9 cut(s) 128, 204, 514, 538, 555, 654, 836, 990, 996
SseBI AGGCCT 2 cut(s) 402, 667
SsiI CCGC 4 cut(s) 41, 406, 456, 1066
SspMI CTAG 1 cut(s) 306
SstI GAGCTC 1 cut(s) 502
StuI AGGCCT 2 cut(s) 402, 667
StyD4I CCNGG 3 cut(s) 26, 139, 199
StyI CCWWGG 1 cut(s) 397
TaaI ACNGT 4 cut(s) 296, 708, 1255, 1366
TaiI ACGT 1 cut(s) 740
TaqI TCGA 4 cut(s) 52, 70, 1175, 1335
TasI AATT 9 cut(s) 128, 204, 514, 538, 555, 654, 836, 990, 996
TauI GCSGC 1 cut(s) 409
TfiI GAWTC 2 cut(s) 371, 940
Tru1I TTAA 3 cut(s) 563, 993, 1250
Tru9I TTAA 3 cut(s) 563, 993, 1250
TscAI CASTG 5 cut(s) 295, 484, 1194, 1321, 1369
TseFI GTSAC 2 cut(s) 463, 520
TseI GCWGC 4 cut(s) 348, 437, 774, 1196
Tsp45I GTSAC 2 cut(s) 463, 520
TspDTI ATGAA 4 cut(s) 17, 251, 440, 914
TspGWI ACGGA 4 cut(s) 858, 1049, 1158, 1214
TspRI CASTG 5 cut(s) 295, 484, 1194, 1321, 1369
Van91I CCANNNNNTGG 1 cut(s) 1055
Vha464I CTTAAG 1 cut(s) 562
XapI RAATTY 1 cut(s) 654
XceI RCATGY 2 cut(s) 286, 473
XhoI CTCGAG 1 cut(s) 1334
XmnI GAANNNNTTC 1 cut(s) 21
XspI CTAG 1 cut(s) 306
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.