Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0002019

Physical Location & Seq

Genomic Coordinates Forward (+)

185224 .. 190701

Gene Structure 5478 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G001200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1254 bp

ATGTTGGAGGGTGGTGCCAAATTCCCTGGAATTACAGGTCTAAACAACCATGAAAACAACTACTATGATTTGTCGCAAGGCTTTTACCACAAACTCCATGAGGGTGAGGGTACCAACATGTCTATTGACAGTATGCAAACGAGCAATGATGGAGGCTCTGTTGCCATGTCTATAGATAACAGCAGCGTTGCTTCAAATACTAACGATTCCCATACTCGCATCTTGAACCACCAAGGGTTACGGCGACGTGCAAATGACAACTACTCTGTCCAAACCAGTGTTAACCGCCGAGGAAGAGTCACACATGCTCTGAGCGATGATCAGCTTGCTCGAGCCCTAATGGACAGCCATTCCTTGACACAGGGGCTTGAGAATTACGAAGAGTGGACAATTGACTTAACAAAGCTAAACATGGGTGAAGCTTTTGCACAAGGTGCTTTTGGGAAGCTATATAGAGGTACTTACAATGGTGAGGATGTTGCTATTAAAATTCTGGAGCGGCCAGAAAATGACCCAGAAAAGGCTCAGGTCATGGAGCAACAGTTTCAACAGGAAGTCAAGATGCTGGCTGCATTGAAACATCCAAACATAGTTCGTTTTATTGGTGGCTGCCGTAAACCAATGGTTTGGTGTATTGTAACAGAGTATGCTAAGGGCGGTTCGGTTAGGCAGTTCTTGATGAAGCGGCAGAGCCGATCAGTTCCGTTGAAATTAGCAGTCAAGCAAGCTTTGGATGTTGCGAGGGGGATGGCATATGTTCATGCTCTTGGGCTGATTCATCGTGACTTAAAATCTGACAACCTGTTGATTTTTTCAGACAAATCAATAAAAATTGCTGATTTTGGGGTTGCCCGTATTGAGGTGCAGACAGAAGGCATGACACCAGAGACTGGGACATACCGTTGGATGGCTCCGGAGATGATCCAGCATAGGCCTTACACTCAGAAAGTTGACGTTTATAGCTTTGGGATTGTTCTTTGGGAGCTTATAACTGGAATGCTTCCCTTCCAGAACATGACAGCGGTGCAGGCGGCATTTGCAGTTGTCAATAAGGGTGTCCGACCTATCATTCCCAGTGACTGCTTACCTCTTCTTGGCGAGATCATGACGAGATGCTGGGATGCCAACCCTGATGTCAGGCCACCCTTCACTGAAGTTGTGAGGATGCTTGAGCATGCAGAGACTGACATCATGACGAATGTCCGCAAGGCCCGTTTCAGGTGTTGCATGACGCAGCCAATGACAGCGGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023052 GO:0035556 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase_Tyr

Protein Analysis

418

Amino Acids

46.9

Weight (kDa)

6.87

Isoelectric Point (pI)

35.29

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002019)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G24360 AT4G31170 AT4G31170 AT4G31170 AT4G31170 AT4G31170 AT4G31170 AT4G31170 AT4G31170 AT4G31170 AT4G31170
fragaria_vesca	FvH4_4g00150 FvH4_4g00150 FvH4_4g00150 FvH4_4g00150
malus_domestica	MD00G1091600.v1.1 MD04G1001200.v1.1 MD04G1001300.v1.1 MD13G1286000.v1.1
prunus_persica	Prupe.1G001200_v2.0.a1 Prupe.1G001300_v2.0.a1
pyrus_communis	pycom04g00180 pycom04g00190 pycom420g00210
rosa_chinensis	RchiOBHm_Chr3g0494021 RchiOBHm_Chr4g0384771
rosa_laevigata	RLG00000010273 RLG00000022687
rosa_multiflora	Rmu_sc0001322.1_g000022 Rmu_sc0003412.1_g000004
rosa_roxburghii	Rroxscaffold_5G00332830 Rroxscaffold_6G00391360
rosa_rugosa	Rorug03G0263700 Rorug03G0297500 Rorug03G0297500
rosa_samantha	Rh3AG313300 Rh3BG349400 Rh3CG346200 Rh3DG348700 Rh4AG001100 Rh4BG001000 Rh4CG000900 Rh4DG001000
rosa_wichuraiana	Rw3G027420 Rw4G000780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	989
Acc65I	GGTACC	1 cut(s)	110
AccB1I	GGYRCC	2 cut(s)	14, 110
AccB7I	CCANNNNNTGG	1 cut(s)	890
AccBSI	CCGCTC	1 cut(s)	499
AccIII	TCCGGA	1 cut(s)	913
AciI	CCGC	8 cut(s)	286, 499, 657, 685, 1022, 1031, 1204, 1247
AclWI	GGATC	1 cut(s)	916
AcoI	YGGCCR	1 cut(s)	500
AcsI	RAATTY	2 cut(s)	20, 489
AcuI	CTGAAG	1 cut(s)	1173
AdeI	CACNNNGTG	1 cut(s)	434
AfaI	GTAC	2 cut(s)	112, 460
AfiI	CCNNNNNNNGG	6 cut(s)	520, 859, 890, 907, 1094, 1218
AflIII	ACRYGT	1 cut(s)	117
AgsI	TTSAA	5 cut(s)	195, 226, 548, 577, 709
AjiI	CACGTC	1 cut(s)	248
AjnI	CCWGG	1 cut(s)	25
AluBI	AGCT	7 cut(s)	325, 406, 422, 448, 728, 963, 985
AluI	AGCT	7 cut(s)	325, 406, 422, 448, 728, 963, 985
Alw26I	GTCTC	2 cut(s)	881, 1175
AlwI	GGATC	1 cut(s)	916
AlwNI	CAGNNNCTG	3 cut(s)	890, 1080, 1184
Ama87I	CYCGRG	1 cut(s)	330
Aor13HI	TCCGGA	1 cut(s)	913
AoxI	GGCC	4 cut(s)	500, 932, 1139, 1209
ApeKI	GCWGC	4 cut(s)	183, 569, 609, 1234
ApoI	RAATTY	2 cut(s)	20, 489
Asp718I	GGTACC	1 cut(s)	110
AspS9I	GGNCC	1 cut(s)	1210
AsuHPI	GGTGA	3 cut(s)	116, 428, 482
AvaI	CYCGRG	1 cut(s)	330
BanI	GGYRCC	2 cut(s)	14, 110
BanII	GRGCYC	1 cut(s)	337
BbvI	GCAGC	4 cut(s)	195, 556, 596, 1246
BccI	CCATC	3 cut(s)	143, 742, 901
BceAI	ACGGC	2 cut(s)	257, 597
BciT130I	CCWGG	1 cut(s)	27
BclI	TGATCA	1 cut(s)	319
BcoDI	GTCTC	2 cut(s)	881, 1175
BfmI	CTRYAG	1 cut(s)	171
BisI	GCNGC	7 cut(s)	184, 500, 570, 610, 686, 1032, 1235
BlsI	GCNGC	7 cut(s)	185, 501, 571, 611, 687, 1033, 1236
Bme1390I	CCNGG	1 cut(s)	27
BmeT110I	CYCGRG	1 cut(s)	330
BmgBI	CACGTC	1 cut(s)	248
BmgT120I	GGNCC	1 cut(s)	1210
BmiI	GGNNCC	3 cut(s)	16, 112, 912
BmrFI	CCNGG	1 cut(s)	27
BmrI	ACTGGG	2 cut(s)	900, 1068
BmsI	GCATC	5 cut(s)	228, 552, 1103, 1111, 1155
BmuI	ACTGGG	2 cut(s)	900, 1068
BoxI	GACNNNNGTC	1 cut(s)	1199
BpmI	CTGGAG	1 cut(s)	515
Bpu10I	CCTNAGC	2 cut(s)	525, 651
BpuEI	CTTGAG	2 cut(s)	389, 1190
BsaJI	CCNNGG	3 cut(s)	25, 232, 289
BsaWI	WCCGGW	1 cut(s)	913
BsaXI	ACNNNNNCTCC	4 cut(s)	144, 174, 527, 557
Bsc4I	CCNNNNNNNGG	6 cut(s)	520, 859, 890, 907, 1094, 1218
Bse1I	ACTGG	4 cut(s)	276, 895, 997, 1074
Bse3DI	GCAATG	1 cut(s)	151
BseAI	TCCGGA	1 cut(s)	913
BseBI	CCWGG	1 cut(s)	27
BseDI	CCNNGG	3 cut(s)	25, 232, 289
BseGI	GGATG	7 cut(s)	481, 580, 739, 753, 912, 1126, 1170
BseLI	CCNNNNNNNGG	6 cut(s)	520, 859, 890, 907, 1094, 1218
BseMI	GCAATG	1 cut(s)	151
BseMII	CTCAG	3 cut(s)	302, 539, 956
BseNI	ACTGG	4 cut(s)	276, 895, 997, 1074
BseXI	GCAGC	4 cut(s)	195, 556, 596, 1246
BseYI	CCCAGC	1 cut(s)	1116
BsgI	GTGCAG	2 cut(s)	884, 1046
BshFI	GGCC	4 cut(s)	502, 934, 1141, 1211
BshNI	GGYRCC	2 cut(s)	14, 110
BsiHKCI	CYCGRG	1 cut(s)	330
BsiSI	CCGG	1 cut(s)	914
BslFI	GGGAC	1 cut(s)	907
BslI	CCNNNNNNNGG	6 cut(s)	520, 859, 890, 907, 1094, 1218
BsmAI	GTCTC	2 cut(s)	881, 1175
BsmFI	GGGAC	1 cut(s)	907
BsmI	GAATGC	1 cut(s)	1002
BsnI	GGCC	4 cut(s)	502, 934, 1141, 1211
BsoBI	CYCGRG	1 cut(s)	330
Bsp1286I	GDGCHC	1 cut(s)	337
Bsp13I	TCCGGA	1 cut(s)	913
Bsp143I	GATC	4 cut(s)	319, 695, 921, 1101
BspACI	CCGC	8 cut(s)	286, 499, 657, 685, 1022, 1031, 1204, 1247
BspANI	GGCC	4 cut(s)	502, 934, 1141, 1211
BspCNI	CTCAG	3 cut(s)	303, 538, 955
BspEI	TCCGGA	1 cut(s)	913
BspHI	TCATGA	2 cut(s)	1104, 1191
BspLI	GGNNCC	3 cut(s)	16, 112, 912
BspPI	GGATC	1 cut(s)	916
BspT107I	GGYRCC	2 cut(s)	14, 110
BsrBI	CCGCTC	1 cut(s)	499
BsrDI	GCAATG	1 cut(s)	151
BsrI	ACTGG	4 cut(s)	276, 895, 997, 1074
BssECI	CCNNGG	3 cut(s)	25, 232, 289
BssMI	GATC	4 cut(s)	319, 695, 921, 1101
BssT1I	CCWWGG	1 cut(s)	232
Bst2UI	CCWGG	1 cut(s)	27
Bst4CI	ACNGT	3 cut(s)	131, 543, 902
Bst6I	CTCTTC	3 cut(s)	289, 375, 1095
BstAPI	GCANNNNNTGC	1 cut(s)	434
BstC8I	GCNNGC	5 cut(s)	327, 567, 726, 1029, 1176
BstDEI	CTNAG	4 cut(s)	311, 525, 651, 942
BstF5I	GGATG	7 cut(s)	481, 580, 739, 753, 912, 1126, 1170
BstKTI	GATC	4 cut(s)	322, 698, 924, 1104
BstMAI	GTCTC	2 cut(s)	881, 1175
BstMBI	GATC	4 cut(s)	319, 695, 921, 1101
BstMWI	GCNNNNNNNGC	3 cut(s)	434, 1028, 1037
BstNI	CCWGG	1 cut(s)	27
BstNSI	RCATGY	3 cut(s)	121, 308, 1178
BstPAI	GACNNNNGTC	1 cut(s)	1199
BstSCI	CCNGG	1 cut(s)	25
BstSFI	CTRYAG	1 cut(s)	171
BstV1I	GCAGC	4 cut(s)	195, 556, 596, 1246
BstXI	CCANNNNNNTGG	1 cut(s)	627
BsuRI	GGCC	4 cut(s)	502, 934, 1141, 1211
BtgZI	GCGATG	1 cut(s)	330
BtrI	CACGTC	1 cut(s)	248
BtsCI	GGATG	7 cut(s)	481, 580, 739, 753, 912, 1126, 1170
BtsIMutI	CAGTG	3 cut(s)	283, 1081, 1149
Cac8I	GCNNGC	5 cut(s)	327, 567, 726, 1029, 1176
CaiI	CAGNNNCTG	3 cut(s)	890, 1080, 1184
CciI	TCATGA	2 cut(s)	1104, 1191
Cfr13I	GGNCC	1 cut(s)	1210
CseI	GACGC	1 cut(s)	1240
Csp6I	GTAC	2 cut(s)	111, 459
CviQI	GTAC	2 cut(s)	111, 459
DdeI	CTNAG	4 cut(s)	311, 525, 651, 942
DpnI	GATC	4 cut(s)	321, 697, 923, 1103
DpnII	GATC	4 cut(s)	319, 695, 921, 1101
DraIII	CACNNNGTG	1 cut(s)	434
EaeI	YGGCCR	1 cut(s)	500
Eam1104I	CTCTTC	3 cut(s)	289, 375, 1095
EarI	CTCTTC	3 cut(s)	289, 375, 1095
Eco130I	CCWWGG	1 cut(s)	232
Eco147I	AGGCCT	1 cut(s)	934
Eco24I	GRGCYC	1 cut(s)	337
Eco57I	CTGAAG	1 cut(s)	1173
Eco88I	CYCGRG	1 cut(s)	330
EcoRII	CCWGG	1 cut(s)	25
EcoT14I	CCWWGG	1 cut(s)	232
EcoT38I	GRGCYC	1 cut(s)	337
ErhI	CCWWGG	1 cut(s)	232
FaqI	GGGAC	1 cut(s)	907
FauNDI	CATATG	1 cut(s)	754
FbaI	TGATCA	1 cut(s)	319
Fnu4HI	GCNGC	7 cut(s)	184, 500, 570, 610, 686, 1032, 1235
FokI	GGATG	7 cut(s)	488, 567, 746, 760, 919, 1133, 1177
FriOI	GRGCYC	1 cut(s)	337
Fsp4HI	GCNGC	7 cut(s)	184, 500, 570, 610, 686, 1032, 1235
GluI	GCNGC	7 cut(s)	184, 500, 570, 610, 686, 1032, 1235
GsaI	CCCAGC	1 cut(s)	1120
GsuI	CTGGAG	1 cut(s)	515
HaeIII	GGCC	4 cut(s)	502, 934, 1141, 1211
HapII	CCGG	1 cut(s)	914
HgaI	GACGC	1 cut(s)	1240
HincII	GTYRAC	2 cut(s)	283, 952
HindII	GTYRAC	2 cut(s)	283, 952
HindIII	AAGCTT	2 cut(s)	420, 726
HinfI	GANTC	3 cut(s)	206, 297, 775
HpaI	GTTAAC	1 cut(s)	283
HpaII	CCGG	1 cut(s)	914
HphI	GGTGA	3 cut(s)	116, 428, 482
Hpy166II	GTNNAC	4 cut(s)	283, 387, 617, 952
Hpy188I	TCNGA	5 cut(s)	312, 796, 817, 945, 1061
Hpy188III	TCNNGA	9 cut(s)	223, 494, 559, 676, 782, 914, 1009, 1105, 1192
Hpy8I	GTNNAC	4 cut(s)	283, 387, 617, 952
Hpy99I	CGWCG	1 cut(s)	249
HpyAV	CCTTC	3 cut(s)	866, 1015, 1156
HpyCH4III	ACNGT	3 cut(s)	131, 543, 902
HpyCH4IV	ACGT	2 cut(s)	247, 954
HpyCH4V	TGCA	9 cut(s)	136, 251, 428, 572, 865, 1027, 1040, 1178, 1227
HpyF10VI	GCNNNNNNNGC	3 cut(s)	434, 1028, 1037
HpyF3I	CTNAG	4 cut(s)	311, 525, 651, 942
HpySE526I	ACGT	2 cut(s)	247, 954
Kpn2I	TCCGGA	1 cut(s)	913
KpnI	GGTACC	1 cut(s)	114
Ksp22I	TGATCA	1 cut(s)	319
KspAI	GTTAAC	1 cut(s)	283
Kzo9I	GATC	4 cut(s)	319, 695, 921, 1101
LmnI	GCTCC	4 cut(s)	496, 535, 916, 982
Lsp1109I	GCAGC	4 cut(s)	195, 556, 596, 1246
LweI	GCATC	5 cut(s)	228, 552, 1103, 1111, 1155
MaeII	ACGT	2 cut(s)	247, 954
MaeIII	GTNAC	5 cut(s)	237, 298, 637, 782, 1076
MalI	GATC	4 cut(s)	321, 697, 923, 1103
MbiI	CCGCTC	1 cut(s)	499
MboI	GATC	4 cut(s)	319, 695, 921, 1101
MboII	GAAGA	3 cut(s)	306, 392, 1082
MfeI	CAATTG	1 cut(s)	390
MhlI	GDGCHC	1 cut(s)	337
MluCI	AATT	7 cut(s)	20, 30, 373, 390, 489, 710, 831
MlyI	GAGTC	1 cut(s)	306
MmeI	TCCRAC	2 cut(s)	884, 1084
MroI	TCCGGA	1 cut(s)	913
MseI	TTAA	4 cut(s)	282, 398, 486, 788
MslI	CAYNNNNRTG	1 cut(s)	102
MspA1I	CMGCKG	2 cut(s)	1022, 1247
MspI	CCGG	1 cut(s)	914
MspR9I	CCNGG	1 cut(s)	27
MunI	CAATTG	1 cut(s)	390
Mva1269I	GAATGC	1 cut(s)	1002
MvaI	CCWGG	1 cut(s)	27
MwoI	GCNNNNNNNGC	3 cut(s)	434, 1028, 1037
NdeI	CATATG	1 cut(s)	754
NdeII	GATC	4 cut(s)	319, 695, 921, 1101
NlaIV	GGNNCC	3 cut(s)	16, 112, 912
NmeAIII	GCCGAG	1 cut(s)	314
NmuCI	GTSAC	3 cut(s)	298, 782, 1076
NspI	RCATGY	3 cut(s)	121, 308, 1178
PaeI	GCATGC	1 cut(s)	1178
PaeR7I	CTCGAG	1 cut(s)	330
PagI	TCATGA	2 cut(s)	1104, 1191
PceI	AGGCCT	1 cut(s)	934
PciI	ACATGT	1 cut(s)	117
PctI	GAATGC	1 cut(s)	1002
PfeI	GAWTC	2 cut(s)	206, 775
PflMI	CCANNNNNTGG	1 cut(s)	890
PkrI	GCNGC	7 cut(s)	185, 501, 571, 611, 687, 1033, 1236
PleI	GAGTC	1 cut(s)	305
PpsI	GAGTC	1 cut(s)	305
PscI	ACATGT	1 cut(s)	117
PshAI	GACNNNNGTC	1 cut(s)	1199
PsiI	TTATAA	1 cut(s)	989
Psp6I	CCWGG	1 cut(s)	25
PspFI	CCCAGC	1 cut(s)	1116
PspGI	CCWGG	1 cut(s)	25
PspN4I	GGNNCC	3 cut(s)	16, 112, 912
PspPI	GGNCC	1 cut(s)	1210
PspXI	VCTCGAGB	1 cut(s)	330
PstNI	CAGNNNCTG	3 cut(s)	890, 1080, 1184
RsaI	GTAC	2 cut(s)	112, 460
RsaNI	GTAC	2 cut(s)	111, 459
RseI	CAYNNNNRTG	1 cut(s)	102
SaqAI	TTAA	4 cut(s)	282, 398, 486, 788
SatI	GCNGC	7 cut(s)	184, 500, 570, 610, 686, 1032, 1235
Sau3AI	GATC	4 cut(s)	319, 695, 921, 1101
Sau96I	GGNCC	1 cut(s)	1210
SchI	GAGTC	1 cut(s)	306
ScrFI	CCNGG	1 cut(s)	27
SduI	GDGCHC	1 cut(s)	337
SfaNI	GCATC	5 cut(s)	228, 552, 1103, 1111, 1155
SfcI	CTRYAG	1 cut(s)	171
Sfr274I	CTCGAG	1 cut(s)	330
SlaI	CTCGAG	1 cut(s)	330
SmiMI	CAYNNNNRTG	1 cut(s)	102
SmlI	CTYRAG	3 cut(s)	330, 368, 1169
SmoI	CTYRAG	3 cut(s)	330, 368, 1169
SphI	GCATGC	1 cut(s)	1178
Sse9I	AATT	7 cut(s)	20, 30, 373, 390, 489, 710, 831
SseBI	AGGCCT	1 cut(s)	934
SsiI	CCGC	8 cut(s)	286, 499, 657, 685, 1022, 1031, 1204, 1247
StuI	AGGCCT	1 cut(s)	934
StyD4I	CCNGG	1 cut(s)	25
StyI	CCWWGG	1 cut(s)	232
TaaI	ACNGT	3 cut(s)	131, 543, 902
TaiI	ACGT	2 cut(s)	250, 957
TaqI	TCGA	1 cut(s)	331
TasI	AATT	7 cut(s)	20, 30, 373, 390, 489, 710, 831
TauI	GCSGC	3 cut(s)	502, 688, 1034
TfiI	GAWTC	2 cut(s)	206, 775
Tru1I	TTAA	4 cut(s)	282, 398, 486, 788
Tru9I	TTAA	4 cut(s)	282, 398, 486, 788
TscAI	CASTG	3 cut(s)	283, 1081, 1156
TseFI	GTSAC	3 cut(s)	298, 782, 1076
TseI	GCWGC	4 cut(s)	183, 569, 609, 1234
Tsp45I	GTSAC	3 cut(s)	298, 782, 1076
TspDTI	ATGAA	4 cut(s)	66, 695, 749, 767
TspGWI	ACGGA	1 cut(s)	693
TspRI	CASTG	3 cut(s)	283, 1081, 1156
Van91I	CCANNNNNTGG	1 cut(s)	890
XapI	RAATTY	2 cut(s)	20, 489
XceI	RCATGY	3 cut(s)	121, 308, 1178
XhoI	CTCGAG	1 cut(s)	330

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.