Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0004493

Physical Location & Seq

Genomic Coordinates Reverse (-)

10781622 .. 10788235

Gene Structure 6614 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G25320.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 5022 bp

ATGAAGCAAAGCTCATCGGAGGCAGTGTCATCGTCTTCTTCATCAGCCGCCGCGGACCAATCTCATCCCTCCGTTTCATCATCATCATCGGAGAAGCCTCTATCTTCCTCTTCGATTTCTCCAGCGGAGGATCTTCAGGTTGGATCGTCGAGAGATGGAAGCGGAGGTGCACAAGAGATCGTAGCCGTCGATCGTCCAGGAGAGTACTCGGCGTTGTGTAGATGGACGGTTGAGAGCTTCACACGTGTCAAAGCTAAGGCACTGTGGAGCAAGTACTTCGATGTAGGAGGATACGATTGTCGTCTCTTGGTTTATCCTAGAGGTGATTCTCAGGCTCTTCCTGGTTACATCAGCATCTATCTTCAGATCATGGACCCTAGAGGAACCACTTCGTCTCGTTGGGATTGTTTCGCTAGCTATCGTCTCTCTATCGTTAATCTTGTCGATGATTCTTTAACAATCCATAAGGATTCTTGGCATAGATTCTCTAGTAAGAAGAAATCTCATGGATGGTGTGATTTCACCTTGAACTCTAGCATTTTGGATCCTAAGATGGGTTTTTTGTTTAACAATGATTCGTTGCTTATCACTGCTGATATCTTGATTCTAAACGAGTCTGTGAGCTTTAGTCGTGATAATAACAATGAGGGGCAATCTTTGTATAAGGAAAATTCCATAGCTGGACCAATGCCGGATGTGTTGAGTGGGAAGTTCACTTGGAAGGTAAATAATTTTAGTTTGTTTAAGGATATGATAAAGACGCAGAAGATTATGAGCCCTGTTTTCCCAGCTGGGGAGTGTAATTTGAGGATCAGTGTGTACCAGAGTGTTGTTAATTCGCAAGAATATATATCAATGTGTTTGGAGAGTAAAGAGACTGAGAAGACTTTGGTTTCAGATAGGAGCTGTTGGTGTTTGTTTAGGATGTCAGCTTTGAATCAGAAGCCTGGTTGCACTCACATGCATAGGGATTCATATGGCAGGTTTGCTGCTGATAATAAGAGTGGGGACAATACGAGCTTGGGCTGGAATGATTACATGAAAATGTCTGAGTTTGTGAACCCGGAAGCTGGGTTTTTACTCGATGATATGGCTGTCTTTAGCACTTCGTTTCATGTTATTAAAGAGTTCAGTAGCTTTACTAAGAATGGTGGGTTGATTGGGGGAAGGAATGGGGCTGGAGCTAGGAAGTCAGATGGACACATGGGAAAATTCACTTGGAGAATTGAAAATTTCACAAGGTTAAAGGATCTTCTAAAGAAGAGGAAGATAACAGGTCTTTGCATCAAAAGTAAGAGGTTTCAAATTGGGAACCGGGATTGTCGACTTATTGTTTATCCCCGAGGGCAGTCCCAGCCACCATGCCATCTTTCAGTATTTCTTGAAGTGACAGATTCACGAAGCTCAAGTGATTGGAGCTGTTTTGTTAGCCACCGACTATCAGTTGTGAACCAGAGATTGGAGGAGAAGTCGGTGACAAAAGAATCTCAGAATCGCTACTCGAAAGCTGCAAAGGATTGGGGTTGGCGTGAGTTTGTGACACTTACTAGTTTGTTTGATCAAGACTCTGGCTTTCTTGTTCAAGACACTGTTGTTTTCTCCGCTGAGGTTCTTATTTTGAAAGAGACATCTGCTACAAAAGAGTATGTGGAGGCAGACTCAACTAATTCAGTTTCTCCGACTGATAACAGCGTCAAAAAAAGTTCATTTACTTGGAAAGTGGAAAATTTCTTAGCCTTCAAAGAGATAATGGAAACACGAAAGATTTTTAGCAAATTCTTTCAGGCTGGTGGATGTGAACTCCGGATTGGTGTATATGAGTCCTTTGACACCATATGCATATATTTAGAGAGTGATCAATCTGCGGGTACAGATGTGGACAATAATTTCTGGGTTAAGTACAAGATGGGTATTCTGAACCAAAAGAATCCGGCCAAAAGTGTGTGGAAGGAGTCATCTATATGTACCAAGACATGGAATAATTCCGTTCTACAGTTTATGAAGGTGTCTGACATGTTGGAGGCTGATGCTGGGTTTCTTGTGCGTGACACAGTTGTGTTTGTGTGTGAAATATTGGATTGTTGTCCTTGGTTTGAGTTTTCAGACCTAGAGGTACTGGCTTCAGATGATGACCAAGATGCCTTAACCACTGATCCTGATGAAATTATTGATTCTGAGGAAAGTGAGGGCATAAGCGGAGATGAGGAAGACACATTTCGAGATTTTCTTTCCCGAGCTGGATTCCATCTCACGTTTGGGGAGAATCCTTCACAACCACAAGTTACTCTCCGTGAGAAGCTTCTAATGGATGCGGGTGCAATTGCTGGGTTTCTTACTGGCTTGCGTGTATATCTTGATGACCCAACTAAAGTAAAGCGTTTACTTCTTCCGACTAAAATATCTTGTAATGATAGAAGCAAGCTAATAAAGAGTGATGAATCTTCCCCTAGCCTAATGAATTTGCTGATGGGTGTTAAAGTTCTACAGCAAGCCATTATTGATTTACTTCTAGATATTATGGTTGAGTGTTGCCAACCTTCAGAGGAAGGCTCTCACTCTGAGCCGTCTTTATTATCCCCAAAGACAGATGGTTGCGTGGCTGCAACTTCATCGGAGTCAACAAGGGAACGAGGAGCAGCAGAACCTTCGCAACATCTTGTTGACGAAAGATTTAAATCTGATACAGATGCTACCCTCAGTACCTCAGCTGTACCAAGCTCAGAGATGAATGGGATCGATTTGCTTGAGAAAGCCCTTGCAATAGAGCCTATGTCTCCTCCTACCACATCTGCTGGGCAATCTTCTGATGCTTCAGTCCAATCAAAGACAAAATGGCCGGAACAGTCTGAGGAGCTATTGGGACTGATTGTGAATTCACTTAAAACCCTTGATGCGGCTGTTCCACAAGGTTGTCCAGAGCCTAGACGACGACCACACTCTGCTCAAAAGATTGCTCTTGTTTTAGACAGAGCACCCAAACATTTGCAACCAGATTTAGTTAGTCTGGTTCCCAAATTGGTTGAGCATTCAGAGCACCCACTGGCTGCTTTAGCACTTATAGAACGGCTTCAAAAGCCTGAAGCTGAACCAGCGTTGCGTGAACCAGTATACAATGCTCTTAGCCAGTTAGAATGCGACAGTGAAGTGTGGGAGGACATTCTATCTCAGTCTTTTGAGCTTTTGAGCGACTTAAATGAGGAATCTCTTGTGGCGGCCATTCATTTCACATTTAAGACTGCCTCCCAGTGCCAACACCTACCTGAAGCCGTAAATGCAGTCCGTGAACGGCTTAAAAGTCTGGGTGCTGATGTGTCTCTTTGTGTCCTTGACTATTTGAGTAAAACCGTACACAGTTGGCCTGGTATTGCCGAAATGATACTTAGGGATATCAACACTGACGACAGTGTAGGTGCCAATTTTGCAACATTACCCTGCGGGCCTTTTCTGATTGGTGAAAATGAGACTGCCTCCGAAATGGCGGATTTGATGGAAGAACATATATTCTATGCAAATAGGCAGTTTTTTGATGTCTACATTCTGCTGGAAATGTTGTCCATATCGTGCCTAGCTGAAGAGGCATCTCAAACATTTGAAAGAGCTGTTGCTCGTGGAGCCATTGTTGCTCAGGCTGTTGCCATGGTCCTTGAAAAACAACGTGTTCAGAGCCCAAATCTGAATGCTACAAGTGGGGATGCTTCTCTTAAGCATCAAGATCCTGTATTGGAGGGAGAAGCCAGTGAGCAACCAGCCACTGGAGGGACTGAGTTCAGGATAATCCTTAATCTTGCTGAGACATTAACTCATTCTAGAGATCCTCAAGTGAGGGGATTTGTGAAAATGCTATACACAATATTATTCAAGTGGTTTCCGGATCAGCCCTTTAGGGTTCAAATACTGAGGAGACTCGTAGACAGATTCACCAGCCCTACGAGTAGCAGCCACGATTTAGACTTAGAGTTGGAGATTCTAGCTATTCTGATTTTTCAGGAGCAAGAGGTTGCGAGACCTGTTTTAGCCATGCTGAAGAAGGTTGTGGAACATGCAAATATTGACAGGGCGGCCCTGTGGCACCAATTGCGTGCAAACAAGGAAGAACTTGTCCGGTTGAAGGAAGAAAAGAAGATAGAGATTCAATCTATGACAAAGGAGAAATCTAGCATCACCCAAAAATTAAGTGAATCTGAGGCTGCAAATACCCGTCTTAAGTCTGAAATGAAAGCTGAGGCGGACCGGTTTTCTCGAGAAAAGAAGGATCTGGTAGAACAGTTTAGGGATGTGGAGAGTCAGCTGGAATGGATCCGATCAGAACGTCAAGATGAGATAGATAAGCTCTCGTCTGAAAAGAAAACTCTTTTGGATCGCCTTCACGAAGCAGAGACGCAACTTGCTTTGCAAAAAACCCGAAAGCGTGATGAACTCAAGAAGGTAGGAAAAGAGAAAAATGCTCTAACCGAGAAGCTAAAGGTAACAGAGGCAGCTCGGAAAAGATTTGAAGAAGAGTTGAAACGGTATGCCACTGAGAATGTAACTCGGGAGGAATTACGCAAGTCACTTGAGGATCAAATCAGGCAATTGACACAGACAGTAGGACAGACAAAAGAAGAGAAACGAGAGAAAGAAGATCAGATTGCTCGGTGTGAAGCTTACATTGATGGAATGGAATCCAAACTCCAAGCTTGCCAGCAATACATCCACACACTAGAATCCTCGCTCCGAGAGGAGATTTCAAGACATGCGCCTCTGTACGGTGCCAATTTAGAGTCTCTATCGATGAAGGAACTGGATACAATAGCTCGTATCCATGAGGAAGGGCTAAGACAGATCCATGCCCTTCAACAACGTAAGGGCCATACATTATCACACGGTCTCCCTCAGGGTCACACACTTTACCCGACTACACCGCCTCAGCTTCCACCAATGGCAATCGGTTTGCCACCTCAGCTTATACCTAATGGTTCAGGGGTTCACTCAAACGGTCATATCAACGGTTCGGTCAGGCCTTGGTTTAGTCACCACACCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004843 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005911 GO:0006508 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008233 GO:0008234 GO:0009506 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009867 GO:0009987 GO:0010033 GO:0016787 GO:0019538 GO:0019783 GO:0023052 GO:0030054 GO:0032870 GO:0036459 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0065007 GO:0070011 GO:0070887 GO:0071229 GO:0071310 GO:0071395 GO:0071495 GO:0071704 GO:0101005 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FancD2 MATH

Protein Analysis

1673

Amino Acids

187.67

Weight (kDa)

5.47

Isoelectric Point (pI)

50.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MATH_2	PF22486	76 - 201	4.7e-20	MATH domain
MATH	PF00917	81 - 203	1.5e-06	MATH domain
MATH_2	PF22486	238 - 368	1.3e-18	MATH domain
MATH_2	PF22486	405 - 538	3.6e-29	MATH domain
MATH	PF00917	433 - 540	8e-10	MATH domain
MATH_2	PF22486	570 - 692	4.7e-13	MATH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0004493)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G25320 AT2G25320 AT2G25320
fragaria_vesca	FvH4_2g28850 FvH4_2g28850 FvH4_2g28850 FvH4_2g28850 FvH4_2g28850 FvH4_2g28850 FvH4_2g28850 FvH4_2g28850 FvH4_2g28850
malus_domestica	MD08G1156500.v1.1 MD15G1127100.v1.1
prunus_persica	Prupe.1G482800_v2.0.a1 Prupe.1G482800_v2.0.a1 Prupe.1G482800_v2.0.a1
pyrus_communis	pycom08g12870 pycom15g11460
rosa_chinensis	RchiOBHm_Chr6g0297611
rosa_laevigata	RLG00000011577
rosa_multiflora	Rmu_ssc0000319.1_g000010
rosa_roxburghii	Rroxscaffold_7G00170320
rosa_rugosa	Rorug06G0274300 Rorug06G0274400.1 Rorug06G0274500 Rorug06G0274600
rosa_samantha	Rh6AG385100 Rh6BG393200 Rh6CG399000 Rh6DG385600
rosa_wichuraiana	Rw6G033550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	972
AccB1I	GGYRCC	3 cut(s)	3410, 4068, 4748
AccB7I	CCANNNNNTGG	3 cut(s)	1459, 1974, 3752
AccI	GTMKAC	4 cut(s)	1324, 3108, 3531, 3909
AccII	CGCG	1 cut(s)	53
AccIII	TCCGGA	2 cut(s)	1803, 3868
AcoI	YGGCCR	3 cut(s)	1932, 2834, 3213
AcsI	RAATTY	7 cut(s)	670, 1211, 1231, 1726, 1775, 2458, 2872
AcuI	CTGAAG	9 cut(s)	119, 347, 2106, 2523, 2796, 3099, 3282, 3591, 4043
AcvI	CACGTG	1 cut(s)	245
AflII	CTTAAG	2 cut(s)	3701, 4202
AflIII	ACRYGT	4 cut(s)	242, 244, 2013, 3655
AgeI	ACCGGT	1 cut(s)	4230
AhlI	ACTAGT	1 cut(s)	1547
AjnI	CCWGG	4 cut(s)	196, 340, 946, 3358
AjuI	GAANNNNNNNTTGG	8 cut(s)	1201, 1233, 1442, 1474, 1791, 1823, 4337, 4369
AleI	CACNNNNGTG	1 cut(s)	2054
Alw21I	GWGCWC	3 cut(s)	172, 2974, 3036
Alw44I	GTGCAC	1 cut(s)	168
AlwNI	CAGNNNCTG	1 cut(s)	3752
Ama87I	CYCGRG	4 cut(s)	1341, 2232, 4239, 4530
Aor13HI	TCCGGA	2 cut(s)	1803, 3868
AoxI	GGCC	8 cut(s)	1932, 2834, 3213, 3356, 3437, 4059, 4846, 4997
ApaLI	GTGCAC	1 cut(s)	168
ApeKI	GCWGC	8 cut(s)	989, 1508, 2600, 2636, 3044, 3936, 4187, 4475
ApoI	RAATTY	7 cut(s)	670, 1211, 1231, 1726, 1775, 2458, 2872
AsiGI	ACCGGT	1 cut(s)	4230
Asp700I	GAANNNNTTC	2 cut(s)	388, 3066
AspLEI	GCGC	1 cut(s)	4738
AspS9I	GGNCC	8 cut(s)	55, 373, 683, 3437, 3640, 4060, 4228, 4846
AsuC2I	CCSGG	2 cut(s)	1064, 1316
AsuHPI	GGTGA	7 cut(s)	335, 514, 1486, 3464, 3910, 4153, 5003
AsuNHI	GCTAGC	1 cut(s)	413
AvaI	CYCGRG	4 cut(s)	1341, 2232, 4239, 4530
AvaII	GGWCC	5 cut(s)	55, 373, 683, 3640, 4228
AxyI	CCTNAGG	1 cut(s)	4872
BaeGI	GKGCMC	1 cut(s)	172
BaeI	ACNNNNGTAYC	4 cut(s)	283, 316, 1860, 1893
BamHI	GGATCC	2 cut(s)	544, 4296
BanI	GGYRCC	3 cut(s)	3410, 4068, 4748
BanII	GRGCYC	2 cut(s)	779, 3668
BauI	CACGAG	1 cut(s)	3606
BbrPI	CACGTG	1 cut(s)	245
BbsI	GAAGAC	3 cut(s)	27, 890, 2214
Bbv12I	GWGCWC	3 cut(s)	172, 2974, 3036
BbvCI	CCTCAGC	5 cut(s)	1605, 2704, 4221, 4905, 4938
BbvI	GCAGC	8 cut(s)	976, 1495, 2587, 2648, 3031, 3948, 4174, 4487
BceAI	ACGGC	5 cut(s)	170, 2548, 3080, 3251, 3302
BcgI	CGANNNNNNTGC	8 cut(s)	12, 46, 259, 293, 2592, 2626, 2628, 2662
BciT130I	CCWGG	4 cut(s)	198, 342, 948, 3360
BciVI	GTATCC	3 cut(s)	284, 4777, 4808
BclI	TGATCA	2 cut(s)	1558, 1855
BcnI	CCSGG	2 cut(s)	1064, 1316
BcuI	ACTAGT	1 cut(s)	1547
BfmI	CTRYAG	2 cut(s)	1991, 2483
BfrI	CTTAAG	2 cut(s)	3701, 4202
BfuAI	ACCTGC	1 cut(s)	972
BfuI	GTATCC	3 cut(s)	284, 4777, 4808
BmcAI	AGTACT	2 cut(s)	206, 275
Bme1390I	CCNGG	6 cut(s)	198, 342, 948, 1064, 1316, 3360
Bme18I	GGWCC	5 cut(s)	55, 373, 683, 3640, 4228
BmeT110I	CYCGRG	4 cut(s)	1341, 2232, 4239, 4530
BmgT120I	GGNCC	8 cut(s)	55, 373, 683, 3437, 3640, 4060, 4228, 4846
BmrFI	CCNGG	6 cut(s)	198, 342, 948, 1064, 1316, 3360
BmrI	ACTGGG	1 cut(s)	3238
BmtI	GCTAGC	1 cut(s)	417
BmuI	ACTGGG	1 cut(s)	3238
BpiI	GAAGAC	3 cut(s)	27, 890, 2214
BplI	GAGNNNNNCTC	6 cut(s)	1643, 1675, 2534, 2566, 3452, 3484
BpmI	CTGGAG	3 cut(s)	105, 1200, 3774
Bpu10I	CCTNAGC	7 cut(s)	255, 1605, 2704, 3624, 4221, 4905, 4938
BpuEI	CTTGAG	5 cut(s)	1390, 2765, 3801, 4403, 4574
BpuMI	CCSGG	2 cut(s)	1064, 1316
Bsa29I	ATCGAT	2 cut(s)	2736, 4769
BsaAI	YACGTR	1 cut(s)	245
BsaBI	GATNNNNATC	1 cut(s)	2674
BsaI	GGTCTC	2 cut(s)	3997, 4871
BsaJI	CCNNGG	5 cut(s)	51, 1342, 2087, 3636, 5000
BsaWI	WCCGGW	4 cut(s)	1803, 3868, 4101, 4230
BsaXI	ACNNNNNCTCC	8 cut(s)	11, 41, 1454, 1484, 3603, 3633, 4851, 4881
Bse118I	RCCGGY	1 cut(s)	4230
Bse1I	ACTGG	9 cut(s)	2121, 2341, 3045, 3104, 3124, 3244, 3735, 3757, 4785
Bse21I	CCTNAGG	1 cut(s)	4872
Bse8I	GATNNNNATC	1 cut(s)	2674
BseAI	TCCGGA	2 cut(s)	1803, 3868
BseBI	CCWGG	4 cut(s)	198, 342, 948, 3360
BseCI	ATCGAT	2 cut(s)	2736, 4769
BseDI	CCNNGG	5 cut(s)	51, 1342, 2087, 3636, 5000
BseGI	GGATG	9 cut(s)	64, 515, 700, 930, 1799, 2314, 3697, 4279, 4689
BseJI	GATNNNNATC	1 cut(s)	2674
BseNI	ACTGG	9 cut(s)	2121, 2341, 3045, 3104, 3124, 3244, 3735, 3757, 4785
BseRI	GAGGAG	6 cut(s)	1478, 2646, 2766, 2864, 3913, 4733
BseSI	GKGCMC	1 cut(s)	172
BseXI	GCAGC	8 cut(s)	976, 1495, 2587, 2648, 3031, 3948, 4174, 4487
BseYI	CCCAGC	7 cut(s)	787, 791, 1070, 1353, 2030, 2324, 2792
Bsh1236I	CGCG	1 cut(s)	53
Bsh1285I	CGRYCG	1 cut(s)	193
BshFI	GGCC	8 cut(s)	1934, 2836, 3215, 3358, 3439, 4061, 4848, 4999
BshNI	GGYRCC	3 cut(s)	3410, 4068, 4748
BshTI	ACCGGT	1 cut(s)	4230
BshVI	ATCGAT	2 cut(s)	2736, 4769
BsiEI	CGRYCG	1 cut(s)	193
BsiHKAI	GWGCWC	3 cut(s)	172, 2974, 3036
BsiHKCI	CYCGRG	4 cut(s)	1341, 2232, 4239, 4530
BsiSI	CCGG	9 cut(s)	692, 1064, 1315, 1804, 1931, 2837, 3869, 4102, 4231
BslFI	GGGAC	4 cut(s)	1022, 1336, 2874, 3772
BsmBI	CGTCTC	4 cut(s)	308, 399, 428, 4370
BsmFI	GGGAC	4 cut(s)	1022, 1336, 2874, 3772
BsmI	GAATGC	3 cut(s)	3025, 3137, 3682
BsnI	GGCC	8 cut(s)	1934, 2836, 3215, 3358, 3439, 4061, 4848, 4999
Bso31I	GGTCTC	2 cut(s)	3997, 4871
BsoBI	CYCGRG	4 cut(s)	1341, 2232, 4239, 4530
Bsp1286I	GDGCHC	5 cut(s)	172, 779, 2974, 3036, 3668
Bsp13I	TCCGGA	2 cut(s)	1803, 3868
Bsp19I	CCATGG	1 cut(s)	3636
BspANI	GGCC	8 cut(s)	1934, 2836, 3215, 3358, 3439, 4061, 4848, 4999
BspDI	ATCGAT	2 cut(s)	2736, 4769
BspEI	TCCGGA	2 cut(s)	1803, 3868
BspFNI	CGCG	1 cut(s)	53
BspMI	ACCTGC	1 cut(s)	972
BspOI	GCTAGC	1 cut(s)	417
BspQI	GCTCTTC	1 cut(s)	342
BspT107I	GGYRCC	3 cut(s)	3410, 4068, 4748
BspTI	CTTAAG	2 cut(s)	3701, 4202
BspTNI	GGTCTC	2 cut(s)	3997, 4871
BsrFI	RCCGGY	1 cut(s)	4230
BsrI	ACTGG	9 cut(s)	2121, 2341, 3045, 3104, 3124, 3244, 3735, 3757, 4785
BssAI	RCCGGY	1 cut(s)	4230
BssECI	CCNNGG	5 cut(s)	51, 1342, 2087, 3636, 5000
BssNAI	GTATAC	1 cut(s)	3109
BssSI	CACGAG	1 cut(s)	3606
BssT1I	CCWWGG	3 cut(s)	2087, 3636, 5000
Bst1107I	GTATAC	1 cut(s)	3109
Bst2BI	CACGAG	1 cut(s)	3606
Bst2UI	CCWGG	4 cut(s)	198, 342, 948, 3360
Bst6I	CTCTTC	6 cut(s)	115, 342, 1256, 3567, 4491, 4596
BstAFI	CTTAAG	2 cut(s)	3701, 4202
BstAPI	GCANNNNNTGC	1 cut(s)	4075
BstBAI	YACGTR	1 cut(s)	245
BstC8I	GCNNGC	8 cut(s)	415, 2342, 2420, 2490, 3437, 4080, 4678, 4682
BstDSI	CCRYGG	2 cut(s)	51, 3636
BstF5I	GGATG	9 cut(s)	64, 515, 700, 930, 1799, 2314, 3697, 4279, 4689
BstFNI	CGCG	1 cut(s)	53
BstHHI	GCGC	1 cut(s)	4738
BstMCI	CGRYCG	1 cut(s)	193
BstNI	CCWGG	4 cut(s)	198, 342, 948, 3360
BstNSI	RCATGY	4 cut(s)	964, 2017, 4043, 4736
BstSCI	CCNGG	6 cut(s)	196, 340, 946, 1062, 1314, 3358
BstSFI	CTRYAG	2 cut(s)	1991, 2483
BstSLI	GKGCMC	1 cut(s)	172
BstUI	CGCG	1 cut(s)	53
BstV1I	GCAGC	8 cut(s)	976, 1495, 2587, 2648, 3031, 3948, 4174, 4487
BstV2I	GAAGAC	3 cut(s)	27, 890, 2214
BstX2I	RGATCY	8 cut(s)	130, 544, 1249, 3712, 3811, 4252, 4296, 4821
BstYI	RGATCY	8 cut(s)	130, 544, 1249, 3712, 3811, 4252, 4296, 4821
BstZ17I	GTATAC	1 cut(s)	3109
Bsu15I	ATCGAT	2 cut(s)	2736, 4769
Bsu36I	CCTNAGG	1 cut(s)	4872
BsuI	GTATCC	3 cut(s)	284, 4777, 4808
BsuRI	GGCC	8 cut(s)	1934, 2836, 3215, 3358, 3439, 4061, 4848, 4999
BsuTUI	ATCGAT	2 cut(s)	2736, 4769
BtgI	CCRYGG	2 cut(s)	51, 3636
BtsCI	GGATG	9 cut(s)	64, 515, 700, 930, 1799, 2314, 3697, 4279, 4689
BtsI	GCAGTG	2 cut(s)	30, 588
BveI	ACCTGC	1 cut(s)	972
Cac8I	GCNNGC	8 cut(s)	415, 2342, 2420, 2490, 3437, 4080, 4678, 4682
CaiI	CAGNNNCTG	1 cut(s)	3752
CfoI	GCGC	1 cut(s)	4738
Cfr10I	RCCGGY	1 cut(s)	4230
Cfr13I	GGNCC	8 cut(s)	55, 373, 683, 3437, 3640, 4060, 4228, 4846
Cfr42I	CCGCGG	1 cut(s)	54
ClaI	ATCGAT	2 cut(s)	2736, 4769
CpoI	CGGWCCG	1 cut(s)	4228
CseI	GACGC	3 cut(s)	769, 1681, 4387
CspAI	ACCGGT	1 cut(s)	4230
CspI	CGGWCCG	1 cut(s)	4228
DraI	TTTAAA	1 cut(s)	2674
EaeI	YGGCCR	3 cut(s)	1932, 2834, 3213
Eam1104I	CTCTTC	6 cut(s)	115, 342, 1256, 3567, 4491, 4596
EarI	CTCTTC	6 cut(s)	115, 342, 1256, 3567, 4491, 4596
EciI	GGCGGA	2 cut(s)	3494, 4241
Eco130I	CCWWGG	3 cut(s)	2087, 3636, 5000
Eco147I	AGGCCT	1 cut(s)	4999
Eco24I	GRGCYC	2 cut(s)	779, 3668
Eco31I	GGTCTC	2 cut(s)	3997, 4871
Eco32I	GATATC	2 cut(s)	598, 3388
Eco47I	GGWCC	5 cut(s)	55, 373, 683, 3640, 4228
Eco57I	CTGAAG	9 cut(s)	119, 347, 2106, 2523, 2796, 3099, 3282, 3591, 4043
Eco72I	CACGTG	1 cut(s)	245
Eco81I	CCTNAGG	1 cut(s)	4872
Eco88I	CYCGRG	4 cut(s)	1341, 2232, 4239, 4530
EcoRI	GAATTC	1 cut(s)	2872
EcoRII	CCWGG	4 cut(s)	196, 340, 946, 3358
EcoRV	GATATC	2 cut(s)	598, 3388
EcoT14I	CCWWGG	3 cut(s)	2087, 3636, 5000
EcoT22I	ATGCAT	2 cut(s)	966, 1841
EcoT38I	GRGCYC	2 cut(s)	779, 3668
ErhI	CCWWGG	3 cut(s)	2087, 3636, 5000
Esp3I	CGTCTC	4 cut(s)	308, 399, 428, 4370
FaqI	GGGAC	4 cut(s)	1022, 1336, 2874, 3772
FauI	CCCGC	3 cut(s)	1858, 2305, 3428
FauNDI	CATATG	2 cut(s)	976, 1835
FbaI	TGATCA	2 cut(s)	1558, 1855
FblI	GTMKAC	4 cut(s)	1324, 3108, 3531, 3909
FokI	GGATG	9 cut(s)	51, 522, 707, 937, 1806, 2321, 3704, 4286, 4676
FriOI	GRGCYC	2 cut(s)	779, 3668
GlaI	GCGC	1 cut(s)	4737
GsaI	CCCAGC	7 cut(s)	791, 795, 1074, 1357, 2034, 2328, 2796
GsuI	CTGGAG	3 cut(s)	105, 1200, 3774
HaeIII	GGCC	8 cut(s)	1934, 2836, 3215, 3358, 3439, 4061, 4848, 4999
HapII	CCGG	9 cut(s)	692, 1064, 1315, 1804, 1931, 2837, 3869, 4102, 4231
HgaI	GACGC	3 cut(s)	769, 1681, 4387
HhaI	GCGC	1 cut(s)	4738
Hin6I	GCGC	1 cut(s)	4736
HinP1I	GCGC	1 cut(s)	4736
HincII	GTYRAC	3 cut(s)	1325, 2619, 2662
HindII	GTYRAC	3 cut(s)	1325, 2619, 2662
HindIII	AAGCTT	3 cut(s)	2297, 4641, 4674
HpaII	CCGG	9 cut(s)	692, 1064, 1315, 1804, 1931, 2837, 3869, 4102, 4231
HphI	GGTGA	7 cut(s)	335, 514, 1486, 3464, 3910, 4153, 5003
Hpy99I	CGWCG	3 cut(s)	151, 191, 2931
HpyCH4IV	ACGT	5 cut(s)	244, 2252, 3655, 4309, 4840
HpySE526I	ACGT	5 cut(s)	244, 2252, 3655, 4309, 4840
HspAI	GCGC	1 cut(s)	4736
Kpn2I	TCCGGA	2 cut(s)	1803, 3868
Ksp22I	TGATCA	2 cut(s)	1558, 1855
KspI	CCGCGG	1 cut(s)	54
LguI	GCTCTTC	1 cut(s)	342
LmnI	GCTCC	9 cut(s)	267, 903, 1181, 1416, 2633, 2851, 3611, 3988, 4716
Lsp1109I	GCAGC	8 cut(s)	976, 1495, 2587, 2648, 3031, 3948, 4174, 4487
MaeII	ACGT	5 cut(s)	244, 2252, 3655, 4309, 4840
MfeI	CAATTG	3 cut(s)	2319, 4073, 4571
MflI	RGATCY	8 cut(s)	130, 544, 1249, 3712, 3811, 4252, 4296, 4821
MhlI	GDGCHC	5 cut(s)	172, 779, 2974, 3036, 3668
MlyI	GAGTC	9 cut(s)	623, 1559, 1652, 1829, 1961, 2624, 3897, 4291, 4769
MmeI	TCCRAC	5 cut(s)	121, 1703, 1998, 2414, 3939
Mph1103I	ATGCAT	2 cut(s)	966, 1841
MroI	TCCGGA	2 cut(s)	1803, 3868
MroXI	GAANNNNTTC	2 cut(s)	388, 3066
MslI	CAYNNNNRTG	4 cut(s)	959, 1043, 1960, 2054
MspA1I	CMGCKG	6 cut(s)	53, 125, 791, 1604, 2708, 4288
MspCI	CTTAAG	2 cut(s)	3701, 4202
MspI	CCGG	9 cut(s)	692, 1064, 1315, 1804, 1931, 2837, 3869, 4102, 4231
MspR9I	CCNGG	6 cut(s)	198, 342, 948, 1064, 1316, 3360
MunI	CAATTG	3 cut(s)	2319, 4073, 4571
Mva1269I	GAATGC	3 cut(s)	3025, 3137, 3682
MvaI	CCWGG	4 cut(s)	198, 342, 948, 3360
MvnI	CGCG	1 cut(s)	53
NciI	CCSGG	2 cut(s)	1064, 1316
NcoI	CCATGG	1 cut(s)	3636
NdeI	CATATG	2 cut(s)	976, 1835
NheI	GCTAGC	1 cut(s)	413
NmeAIII	GCCGAG	1 cut(s)	188
NmuCI	GTSAC	7 cut(s)	1387, 1474, 1537, 2045, 4548, 4877, 5009
NsiI	ATGCAT	2 cut(s)	966, 1841
NspI	RCATGY	4 cut(s)	964, 2017, 4043, 4736
OliI	CACNNNNGTG	1 cut(s)	2054
PaeR7I	CTCGAG	1 cut(s)	4239
PceI	AGGCCT	1 cut(s)	4999
PciI	ACATGT	1 cut(s)	2013
PciSI	GCTCTTC	1 cut(s)	342
PcsI	WCGNNNNNNNCGW	1 cut(s)	186
PctI	GAATGC	3 cut(s)	3025, 3137, 3682
PdmI	GAANNNNTTC	2 cut(s)	388, 3066
PflMI	CCANNNNNTGG	3 cut(s)	1459, 1974, 3752
PfoI	TCCNGGA	1 cut(s)	196
PinAI	ACCGGT	1 cut(s)	4230
Ple19I	CGATCG	1 cut(s)	193
PleI	GAGTC	9 cut(s)	622, 1559, 1652, 1828, 1960, 2623, 3897, 4290, 4768
PmaCI	CACGTG	1 cut(s)	245
PmlI	CACGTG	1 cut(s)	245
PpsI	GAGTC	9 cut(s)	622, 1559, 1652, 1828, 1960, 2623, 3897, 4290, 4768
Ppu21I	YACGTR	1 cut(s)	245
PscI	ACATGT	1 cut(s)	2013
Psp6I	CCWGG	4 cut(s)	196, 340, 946, 3358
PspCI	CACGTG	1 cut(s)	245
PspFI	CCCAGC	7 cut(s)	787, 791, 1070, 1353, 2030, 2324, 2792
PspGI	CCWGG	4 cut(s)	196, 340, 946, 3358
PspPI	GGNCC	8 cut(s)	55, 373, 683, 3437, 3640, 4060, 4228, 4846
PstNI	CAGNNNCTG	1 cut(s)	3752
PsuI	RGATCY	8 cut(s)	130, 544, 1249, 3712, 3811, 4252, 4296, 4821
PvuI	CGATCG	1 cut(s)	193
PvuII	CAGCTG	3 cut(s)	791, 2708, 4288
RseI	CAYNNNNRTG	4 cut(s)	959, 1043, 1960, 2054
Rsr2I	CGGWCCG	1 cut(s)	4228
RsrII	CGGWCCG	1 cut(s)	4228
SacII	CCGCGG	1 cut(s)	54
SalI	GTCGAC	1 cut(s)	1323
SapI	GCTCTTC	1 cut(s)	342
Sau96I	GGNCC	8 cut(s)	55, 373, 683, 3437, 3640, 4060, 4228, 4846
ScaI	AGTACT	2 cut(s)	206, 275
SchI	GAGTC	9 cut(s)	623, 1559, 1652, 1829, 1961, 2624, 3897, 4291, 4769
ScrFI	CCNGG	6 cut(s)	198, 342, 948, 1064, 1316, 3360
SduI	GDGCHC	5 cut(s)	172, 779, 2974, 3036, 3668
SfcI	CTRYAG	2 cut(s)	1991, 2483
Sfr274I	CTCGAG	1 cut(s)	4239
Sfr303I	CCGCGG	1 cut(s)	54
SgrBI	CCGCGG	1 cut(s)	54
SinI	GGWCC	5 cut(s)	55, 373, 683, 3640, 4228
SlaI	CTCGAG	1 cut(s)	4239
SmiI	ATTTAAAT	1 cut(s)	2674
SmiMI	CAYNNNNRTG	4 cut(s)	959, 1043, 1960, 2054
SmlI	CTYRAG	8 cut(s)	1405, 2744, 3701, 3816, 4202, 4239, 4418, 4553
SmoI	CTYRAG	8 cut(s)	1405, 2744, 3701, 3816, 4202, 4239, 4418, 4553
SpeI	ACTAGT	1 cut(s)	1547
SseBI	AGGCCT	1 cut(s)	4999
SspI	AATATT	3 cut(s)	2073, 3852, 4048
StuI	AGGCCT	1 cut(s)	4999
StyD4I	CCNGG	6 cut(s)	196, 340, 946, 1062, 1314, 3358
StyI	CCWWGG	3 cut(s)	2087, 3636, 5000
SwaI	ATTTAAAT	1 cut(s)	2674
TaiI	ACGT	5 cut(s)	247, 2255, 3658, 4312, 4843
TaqII	GACCGA	1 cut(s)	4981
TatI	WGTACW	3 cut(s)	204, 273, 1899
TauI	GCSGC	5 cut(s)	50, 53, 2897, 3215, 4061
TseFI	GTSAC	7 cut(s)	1387, 1474, 1537, 2045, 4548, 4877, 5009
TseI	GCWGC	8 cut(s)	989, 1508, 2600, 2636, 3044, 3936, 4187, 4475
Tsp45I	GTSAC	7 cut(s)	1387, 1474, 1537, 2045, 4548, 4877, 5009
TspGWI	ACGGA	4 cut(s)	61, 1975, 2279, 3269
Van91I	CCANNNNNTGG	3 cut(s)	1459, 1974, 3752
Vha464I	CTTAAG	2 cut(s)	3701, 4202
VneI	GTGCAC	1 cut(s)	168
VpaK11BI	GGWCC	5 cut(s)	55, 373, 683, 3640, 4228
XapI	RAATTY	7 cut(s)	670, 1211, 1231, 1726, 1775, 2458, 2872
XbaI	TCTAGA	2 cut(s)	2509, 3806
XceI	RCATGY	4 cut(s)	964, 2017, 4043, 4736
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2252
XhoI	CTCGAG	1 cut(s)	4239
XmiI	GTMKAC	4 cut(s)	1324, 3108, 3531, 3909
XmnI	GAANNNNTTC	2 cut(s)	388, 3066
ZrmI	AGTACT	2 cut(s)	206, 275
Zsp2I	ATGCAT	2 cut(s)	966, 1841

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.